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authorJonathan Clark <jon.h.clark@gmail.com>2011-03-11 10:09:18 -0500
committerJonathan Clark <jon.h.clark@gmail.com>2011-03-11 10:09:18 -0500
commit25d5729b850d1dc62eaf151b5550bd83963b08e8 (patch)
tree8c45300c7880df46796d7f0adbe23fd987ea3a5a /vest
parent702df29b83ca10998ea3a8f84bc2e0e6c9e86eea (diff)
dont die when there are no running jobs
Diffstat (limited to 'vest')
-rwxr-xr-xvest/dist-vest.pl4
1 files changed, 2 insertions, 2 deletions
diff --git a/vest/dist-vest.pl b/vest/dist-vest.pl
index c27af804..cfddf61c 100755
--- a/vest/dist-vest.pl
+++ b/vest/dist-vest.pl
@@ -1,4 +1,4 @@
-#!/usr/bin/env perl
+#grep!/usr/bin/env perl
use strict;
my @ORIG_ARGV=@ARGV;
use Cwd qw(getcwd);
@@ -396,7 +396,7 @@ while (1){
print STDERR "Waiting for mappers to complete...\n";
while ($nmappers > 0) {
sleep 5;
- my @livejobs = grep(/$joblist/, split(/\n/, check_output("qstat | grep -v ' C '")));
+ my @livejobs = grep(/$joblist/, split(/\n/, check_output("qstat | awk '{if($0 !~ \" C \"){print}}'")));
$nmappers = scalar @livejobs;
}
print STDERR "All mappers complete.\n";