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#ifndef _ALIGNER_H_
#include <string>
#include <iostream>
#include <boost/shared_ptr.hpp>
#include "array2d.h"
#include "lattice.h"
class Hypergraph;
class SentenceMetadata;
struct AlignerTools {
static boost::shared_ptr<Array2D<bool> > ReadPharaohAlignmentGrid(const std::string& al);
static void SerializePharaohFormat(const Array2D<bool>& alignment, std::ostream* out);
// assumption: g contains derivations of input/ref and
// ONLY input/ref.
// if edges is non-NULL, the alignment corresponding to the edge rules will be written
static void WriteAlignment(const Lattice& src,
const Lattice& ref,
const Hypergraph& g,
std::ostream* out,
bool map_instead_of_viterbi = true,
const std::vector<bool>* edges = NULL);
};
#endif
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