summaryrefslogtreecommitdiff
path: root/sa-extract/calignment.pyx
diff options
context:
space:
mode:
authorChris Dyer <cdyer@cs.cmu.edu>2012-07-27 17:31:00 -0400
committerChris Dyer <cdyer@cs.cmu.edu>2012-07-27 17:31:00 -0400
commitb317e0efd2398d75d70e027bb1e2cf442e683981 (patch)
treeec34aff0ce4e8fb9704d1cd2b7abf00cb9a25b9a /sa-extract/calignment.pyx
parentb2a8bccb2bd713d9ec081cf3dad0162c2cb492d8 (diff)
remove old suffix array extractor (use the one in python/ instead)
Diffstat (limited to 'sa-extract/calignment.pyx')
-rw-r--r--sa-extract/calignment.pyx128
1 files changed, 0 insertions, 128 deletions
diff --git a/sa-extract/calignment.pyx b/sa-extract/calignment.pyx
deleted file mode 100644
index 976fcd66..00000000
--- a/sa-extract/calignment.pyx
+++ /dev/null
@@ -1,128 +0,0 @@
-import log
-import gzip
-import cintlist
-
-from libc.stdio cimport FILE, fopen, fread, fwrite, fclose
-from libc.stdlib cimport malloc, realloc, free
-
-# Note: Callison-Burch uses short instead of int.
-# We have the space for our corpus, so this is not a problem;
-# May need to revisit if things get really tight, though.
-cdef class Alignment:
-
-
- cdef int link(self, int i, int j):
- '''Integerizes an alignment link pair'''
- return i*65536 + j
-
-
- def unlink(self, link):
- '''De-integerizes an alignment link pair'''
- return (link/65536, link%65536)
-
-
- cdef _unlink(self, int link, int* f, int* e):
- f[0] = link/65536
- e[0] = link%65536
-
-
- def get_sent_links(self, int sent_id):
- cdef cintlist.CIntList sent_links
- cdef int* arr
- cdef int arr_len
-
- sent_links = cintlist.CIntList()
- arr = self._get_sent_links(sent_id, &arr_len)
- sent_links._extend_arr(arr, arr_len*2)
- free(arr)
- return sent_links
-
-
- cdef int* _get_sent_links(self, int sent_id, int* num_links):
- cdef int* sent_links
- cdef int i, start, end
-
- start = self.sent_index.arr[sent_id]
- end = self.sent_index.arr[sent_id+1]
- num_links[0] = end - start
- sent_links = <int*> malloc(2*num_links[0]*sizeof(int))
- for i from 0 <= i < num_links[0]:
- self._unlink(self.links.arr[start + i], sent_links + (2*i), sent_links + (2*i) + 1)
- return sent_links
-
-
- def __cinit__(self, filename, from_binary=False):
- self.links = cintlist.CIntList(1000,1000)
- self.sent_index = cintlist.CIntList(1000,1000)
- log.writeln("Reading alignment from file %s" % filename)
- if from_binary:
- self.read_binary(filename)
- else:
- self.read_text(filename)
-
-
- def read_text(self, filename):
- if filename[-2:] == "gz":
- f = gzip.GzipFile(filename)
- else:
- f = open(filename)
- for line in f:
- self.sent_index.append(len(self.links))
- pairs = line.split()
- for pair in pairs:
- (i, j) = map(int, pair.split('-'))
- self.links.append(self.link(i, j))
- self.sent_index.append(len(self.links))
-
-
- def read_binary(self, filename):
- cdef FILE* f
- cdef bytes bfilename = filename
- cdef char* cfilename = bfilename
- f = fopen(cfilename, "r")
- self.links.read_handle(f)
- self.sent_index.read_handle(f)
- fclose(f)
-
-
- def write_text(self, filename):
- f = open(filename, "w")
- sent_num = 0
- for i, link in enumerate(self.links):
- while i >= self.sent_index[sent_num]:
- f.write("\n")
- sent_num = sent_num + 1
- f.write("%d-%d " % self.unlink(link))
- f.write("\n")
-
-
- def write_binary(self, filename):
- cdef FILE* f
- cdef bytes bfilename = filename
- cdef char* cfilename = bfilename
- f = fopen(cfilename, "w")
- self.links.write_handle(f)
- self.sent_index.write_handle(f)
- fclose(f)
-
-
- def write_enhanced(self, filename):
- f = open(filename, "w")
- sent_num = 1
- for link in self.links:
- f.write("%d " % link)
- f.write("\n")
- for i in self.sent_index:
- f.write("%d " % i)
- f.write("\n")
-
-
- def alignment(self, i):
- '''Return all (e,f) pairs for sentence i'''
- cdef int j, start, end
- result = []
- start = self.sent_index.arr[i]
- end = self.sent_index.arr[i+1]
- for j from start <= j < end:
- result.append(self.unlink(self.links.arr[j]))
- return result