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2010-08-23fixed llh and changed to random initialiser.philblunsom
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@614 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-08-20fix duplicate help argumentredpony
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@605 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-08-11major refactor, break bad circular depsredpony
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@509 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-25added missing file.philblunsom
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@402 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-23Changed the initialisation of the sampler, hopefully this will work better.philblunsom
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@376 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-20Fixed bug in mpi output.philblunsom
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@335 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-19A slightly more general version.philblunsom
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@328 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-19MPI stuff: hierarchical topics should work.philblunsom
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@321 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-19Vaguely working distributed implementation. Hierarchical topics doesn't yet ↵philblunsom
work correctly. git-svn-id: https://ws10smt.googlecode.com/svn/trunk@317 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-16git-svn-id: https://ws10smt.googlecode.com/svn/trunk@285 ↵philblunsom
ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-16working on mpi implementation.philblunsom@gmail.com
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@283 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-15Fixed rather large bug in the table handling for the hierarchical models.philblunsom@gmail.com
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@265 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-15Fixed bug with random number generator passed to slice sampler.philblunsom@gmail.com
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@261 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-15working on the mpi versionphilblunsom
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@257 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-14starting an mpi version.philblunsom
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@253 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-13added thresholding for span labellingbothameister
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@247 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-13added queue mechanism to parallelization of hyperparam resampling; new ↵bothameister
program argument 'num_jobs' to control granularity. git-svn-id: https://ws10smt.googlecode.com/svn/trunk@232 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-08add staticredpony
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@189 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-07cygwin compilegraehl
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@176 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-06Added simple multi-threading during hyperparameter resampling. Added cmdarg ↵bothameister
for controlling number of threads. Moved Timer to its own header file. Cleaned up Makefile.am git-svn-id: https://ws10smt.googlecode.com/svn/trunk@170 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-06removed dependency on gammadist.c to be absolutely sure our code doesn't use ↵bothameister
the old non-threadsafe RNG git-svn-id: https://ws10smt.googlecode.com/svn/trunk@149 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-05migrating away from mt19937ar to Boost.Random - separate RNG instances used ↵bothameister
in various places git-svn-id: https://ws10smt.googlecode.com/svn/trunk@146 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-05restaurant instances are now kept in ptr_vectors instead of standard ↵bothameister
vectors; avoids copy constructing of those instances, which creates problems when including Boost's RNG objects as members in a restaurant. git-svn-id: https://ws10smt.googlecode.com/svn/trunk@145 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-05Updated config file handling for pyp-topics and pipeline.philblunsom
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@141 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02cygwin compilegraehl
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@122 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02Updated pipeline defaults.philblunsom
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@121 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02git-svn-id: https://ws10smt.googlecode.com/svn/trunk@116 ↵philblunsom@gmail.com
ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02git-svn-id: https://ws10smt.googlecode.com/svn/trunk@115 ↵philblunsom@gmail.com
ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02log llh with more precisionredpony
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@114 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02git-svn-id: https://ws10smt.googlecode.com/svn/trunk@113 ↵philblunsom@gmail.com
ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02git-svn-id: https://ws10smt.googlecode.com/svn/trunk@112 ↵philblunsom@gmail.com
ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02git-svn-id: https://ws10smt.googlecode.com/svn/trunk@111 ↵philblunsom@gmail.com
ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02git-svn-id: https://ws10smt.googlecode.com/svn/trunk@109 ↵philblunsom@gmail.com
ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02Hopefully fixed the time issue now ...philblunsom@gmail.com
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@108 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02git-svn-id: https://ws10smt.googlecode.com/svn/trunk@107 ↵philblunsom@gmail.com
ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02git-svn-id: https://ws10smt.googlecode.com/svn/trunk@106 ↵philblunsom@gmail.com
ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02git-svn-id: https://ws10smt.googlecode.com/svn/trunk@105 ↵philblunsom@gmail.com
ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02Undid timer changes, will have to think of something else ...philblunsom
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@104 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02Changed timer to be mac compatible.philblunsom@gmail.com
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@103 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02Small change to streamline sampling calculation.philblunsom@gmail.com
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@102 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-02changed timer mechanism to play nice with multiple threadsbothameister
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@99 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-01Added hierarchical topics.philblunsom@gmail.com
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@88 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-07-01Added hierarchical topics.philblunsom@gmail.com
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@87 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-06-30switched to doublesphilblunsom@gmail.com
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@83 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-06-30Added singleton filter.philblunsom@gmail.com
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@73 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-06-29Added singleton filter.philblunsom@gmail.com
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@72 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-06-29Added singleton filter.philblunsom@gmail.com
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@70 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-06-29rev stringredpony
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@62 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-06-29test rev stringredpony
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@60 ec762483-ff6d-05da-a07a-a48fb63a330f
2010-06-29isolate warning messagesredpony
git-svn-id: https://ws10smt.googlecode.com/svn/trunk@56 ec762483-ff6d-05da-a07a-a48fb63a330f