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Diffstat (limited to 'realtime/rt/aligner.py')
| -rw-r--r-- | realtime/rt/aligner.py | 6 |
1 files changed, 6 insertions, 0 deletions
diff --git a/realtime/rt/aligner.py b/realtime/rt/aligner.py index 4a0ace48..3c6ea144 100644 --- a/realtime/rt/aligner.py +++ b/realtime/rt/aligner.py @@ -1,3 +1,4 @@ +import logging import os import sys import subprocess @@ -19,8 +20,13 @@ class ForceAligner: rev_cmd = [fast_align, '-i', '-', '-d', '-T', rev_T, '-m', rev_m, '-f', rev_params, '-r'] tools_cmd = [atools, '-i', '-', '-j', '-', '-c', 'grow-diag-final-and'] + logging.info('Executing: {}'.format(' '.join(fwd_cmd))) self.fwd_align = util.popen_io(fwd_cmd) + + logging.info('Executing: {}'.format(' '.join(rev_cmd))) self.rev_align = util.popen_io(rev_cmd) + + logging.info('Executing: {}'.format(' '.join(tools_cmd))) self.tools = util.popen_io(tools_cmd) def align(self, source, target): |