1 files changed, 97 insertions, 0 deletions
diff --git a/gi/pyp-topics/src/mpi-pyp-topics.hh b/gi/pyp-topics/src/mpi-pyp-topics.hh
new file mode 100644
index 00000000..d978c7a1
--- /dev/null
+++ b/gi/pyp-topics/src/mpi-pyp-topics.hh
@@ -0,0 +1,97 @@
+#ifndef PYP_TOPICS_HH
+#define PYP_TOPICS_HH
+
+#include <vector>
+#include <iostream>
+#include <boost/ptr_container/ptr_vector.hpp>
+
+#include <boost/random/uniform_real.hpp>
+#include <boost/random/variate_generator.hpp>
+#include <boost/random/mersenne_twister.hpp>
+
+#include "mpi-pyp.hh"
+#include "corpus.hh"
+#include "workers.hh"
+
+class PYPTopics {
+public:
+  typedef std::vector<int> DocumentTopics;
+  typedef std::vector<DocumentTopics> CorpusTopics;
+  typedef double F;
+
+public:
+  PYPTopics(int num_topics, bool use_topic_pyp=false, unsigned long seed = 0,
+        int max_threads = 1) 
+    : m_num_topics(num_topics), m_word_pyps(1), 
+    m_topic_pyp(0.5,1.0,seed), m_use_topic_pyp(use_topic_pyp),
+    m_seed(seed),
+    uni_dist(0,1), rng(seed == 0 ? (unsigned long)this : seed), 
+    rnd(rng, uni_dist), max_threads(max_threads) {}
+
+  void sample_corpus(const Corpus& corpus, int samples,
+                     int freq_cutoff_start=0, int freq_cutoff_end=0, 
+                     int freq_cutoff_interval=0,
+                     int max_contexts_per_document=0);
+
+  int sample(const DocumentId& doc, const Term& term);
+  int max(const DocumentId& doc, const Term& term) const;
+  int max(const DocumentId& doc) const;
+  int max_topic() const;
+
+  void set_backoff(const std::string& filename) {
+    m_backoff.reset(new TermBackoff);
+    m_backoff->read(filename);
+    m_word_pyps.clear();
+    m_word_pyps.resize(m_backoff->order(), PYPs());
+  }
+  void set_backoff(TermBackoffPtr backoff) {
+    m_backoff = backoff;
+    m_word_pyps.clear();
+    m_word_pyps.resize(m_backoff->order(), PYPs());
+  }
+
+  F prob(const Term& term, int topic, int level=0) const;
+  void decrement(const Term& term, int topic, int level=0);
+  void increment(const Term& term, int topic, int level=0);
+
+  std::ostream& print_document_topics(std::ostream& out) const;
+  std::ostream& print_topic_terms(std::ostream& out) const;
+
+private:
+  F word_pyps_p0(const Term& term, int topic, int level) const;
+
+  int m_num_topics;
+  F m_term_p0, m_topic_p0, m_backoff_p0;
+
+  CorpusTopics m_corpus_topics;
+  typedef boost::ptr_vector< PYP<int> > PYPs;
+  PYPs m_document_pyps;
+  std::vector<PYPs> m_word_pyps;
+  PYP<int> m_topic_pyp;
+  bool m_use_topic_pyp;
+
+  unsigned long m_seed;
+
+  typedef boost::mt19937 base_generator_type;
+  typedef boost::uniform_real<> uni_dist_type;
+  typedef boost::variate_generator<base_generator_type&, uni_dist_type> gen_type;
+
+  uni_dist_type uni_dist;
+  base_generator_type rng; //this gets the seed
+  gen_type rnd; //instantiate: rnd(rng, uni_dist)
+                //call: rnd() generates uniform on [0,1)
+
+  typedef boost::function<F()> JobReturnsF;
+  typedef SimpleWorker<JobReturnsF, F> SimpleResampleWorker;
+  typedef boost::ptr_vector<SimpleResampleWorker> WorkerPtrVect;
+
+  F hresample_docs(int num_threads, int thread_id);
+
+//  F hresample_topics();
+  
+  int max_threads;
+
+  TermBackoffPtr m_backoff;
+};
+
+#endif // PYP_TOPICS_HH