diff options
Diffstat (limited to 'gi/clda')
| -rw-r--r-- | gi/clda/src/ccrp.h | 139 | ||||
| -rw-r--r-- | gi/clda/src/clda.cc | 87 | 
2 files changed, 192 insertions, 34 deletions
diff --git a/gi/clda/src/ccrp.h b/gi/clda/src/ccrp.h new file mode 100644 index 00000000..e978225d --- /dev/null +++ b/gi/clda/src/ccrp.h @@ -0,0 +1,139 @@ +#ifndef _CCRP_H_ +#define _CCRP_H_ + +#include <cassert> +#include <cmath> +#include <list> +#include <iostream> +#include <vector> +#include <tr1/unordered_map> +#include <boost/functional/hash.hpp> +#include "sampler.h" + +// Chinese restaurant process (Pitman-Yor parameters) with explicit table +// tracking. + +template <typename Dish, typename DishHash = boost::hash<Dish> > +class CCRP { + public: +  CCRP(double disc, double conc) : num_tables_(), num_customers_(), discount_(disc), concentration_(conc) {} + +  int increment(const Dish& dish, const double& p0, MT19937* rng) { +    DishLocations& loc = dish_locs_[dish]; +    bool share_table = false; +    if (loc.dish_count_) { +      const double p_empty = (concentration_ + num_tables_ * discount_) * p0; +      const double p_share = (loc.dish_count_ - loc.table_counts_.size() * discount_); +      share_table = rng->SelectSample(p_empty, p_share); +    } +    if (share_table) { +      double r = rng->next() * (loc.dish_count_ - loc.table_counts_.size() * discount_); +      for (typename std::list<unsigned>::iterator ti = loc.table_counts_.begin(); +           ti != loc.table_counts_.end(); ++ti) { +        r -= (*ti - discount_); +        if (r <= 0.0) { +          ++(*ti); +          break; +        } +      } +      if (r > 0.0) { +        std::cerr << "Serious error: r=" << r << std::endl; +        Print(&std::cerr); +        assert(r <= 0.0); +      } +    } else { +      loc.table_counts_.push_back(1u); +      ++num_tables_; +    } +    ++loc.dish_count_; +    ++num_customers_; +    return (share_table ? 0 : 1); +  } + +  int decrement(const Dish& dish, MT19937* rng) { +    DishLocations& loc = dish_locs_[dish]; +    assert(loc.dish_count_); +    if (loc.dish_count_ == 1) { +      dish_locs_.erase(dish); +      --num_tables_; +      --num_customers_; +      return -1; +    } else { +      int delta = 0; +      double r = rng->next() * (loc.dish_count_ - loc.table_counts_.size() * discount_); +      --loc.dish_count_; +      for (typename std::list<unsigned>::iterator ti = loc.table_counts_.begin(); +           ti != loc.table_counts_.end(); ++ti) { +        r -= (*ti - discount_); +        if (r <= 0.0) { +          if ((--(*ti)) == 0) { +            --num_tables_; +            delta = -1; +            loc.table_counts_.erase(ti); +          } +          break; +        } +      } +      if (r > 0.0) { +        std::cerr << "Serious error: r=" << r << std::endl; +        Print(&std::cerr); +        assert(r <= 0.0); +      } +      --num_customers_; +      return delta; +    } +  } + +  double prob(const Dish& dish, const double& p0) const { +    const typename std::tr1::unordered_map<Dish, DishLocations, DishHash>::const_iterator it = dish_locs_.find(dish); +    const double r = num_tables_ * discount_ + concentration_; +    if (it == dish_locs_.end()) { +      return r * p0 / (num_customers_ + concentration_); +    } else { +      return (it->second.dish_count_ - discount_ * it->second.table_counts_.size() + r * p0) / +               (num_customers_ + concentration_); +    } +  } + +  double llh() const { +    if (num_customers_) { +      std::cerr << "not implemented\n"; +      return 0.0; +    } else { +      return 0.0; +    } +  } + +  struct DishLocations { +    DishLocations() : dish_count_() {} +    unsigned dish_count_; +    std::list<unsigned> table_counts_; // list<> gives O(1) deletion and insertion, which we want +  }; + +  void Print(std::ostream* out) const { +    for (typename std::tr1::unordered_map<Dish, DishLocations, DishHash>::const_iterator it = dish_locs_.begin(); +         it != dish_locs_.end(); ++it) { +      (*out) << it->first << " (" << it->second.dish_count_ << " on " << it->second.table_counts_.size() << " tables): "; +      for (typename std::list<unsigned>::const_iterator i = it->second.table_counts_.begin(); +           i != it->second.table_counts_.end(); ++i) { +        (*out) << " " << *i; +      } +      (*out) << std::endl; +    } +  } + +  unsigned num_tables_; +  unsigned num_customers_; +  std::tr1::unordered_map<Dish, DishLocations, DishHash> dish_locs_; + +  double discount_; +  double concentration_; +}; + +template <typename T,typename H> +std::ostream& operator<<(std::ostream& o, const CCRP<T,H>& c) { +  c.Print(&o); +  return o; +} + +#endif diff --git a/gi/clda/src/clda.cc b/gi/clda/src/clda.cc index 757a4691..ea224a27 100644 --- a/gi/clda/src/clda.cc +++ b/gi/clda/src/clda.cc @@ -1,9 +1,11 @@  #include <iostream>  #include <vector>  #include <map> +#include <string>  #include "timer.h"  #include "crp.h" +#include "ccrp.h"  #include "sampler.h"  #include "tdict.h"  const size_t MAX_DOC_LEN_CHARS = 10000000; @@ -18,12 +20,44 @@ void ShowTopWordsForTopic(const map<WordID, int>& counts) {    for (multimap<int, WordID>::reverse_iterator it = ms.rbegin(); it != ms.rend(); ++it) {      cerr << it->first << ':' << TD::Convert(it->second) << " ";      ++cc; -    if (cc==12) break; +    if (cc==20) break;    }    cerr << endl;  } +void tc() { +  MT19937 rng; +  CCRP<string> crp(0.1, 5); +  double un = 0.25; +  int tt = 0; +  tt += crp.increment("hi", un, &rng); +  tt += crp.increment("foo", un, &rng); +  tt += crp.increment("bar", un, &rng); +  tt += crp.increment("bar", un, &rng); +  tt += crp.increment("bar", un, &rng); +  tt += crp.increment("bar", un, &rng); +  tt += crp.increment("bar", un, &rng); +  tt += crp.increment("bar", un, &rng); +  tt += crp.increment("bar", un, &rng); +  cout << "tt=" << tt << endl; +  cout << crp << endl; +  cout << "  P(bar)=" << crp.prob("bar", un) << endl; +  cout << "  P(hi)=" << crp.prob("hi", un) << endl; +  cout << "  P(baz)=" << crp.prob("baz", un) << endl; +  cout << "  P(foo)=" << crp.prob("foo", un) << endl; +  double x = crp.prob("bar", un) + crp.prob("hi", un) + crp.prob("baz", un) + crp.prob("foo", un); +  cout << "    tot=" << x << endl; +  tt += crp.decrement("hi", &rng); +  tt += crp.decrement("bar", &rng); +  cout << crp << endl; +  tt += crp.decrement("bar", &rng); +  cout << crp << endl; +  cout << "tt=" << tt << endl; +  cout << crp.llh() << endl; +} +  int main(int argc, char** argv) { +  tc();    if (argc != 3) {      cerr << "Usage: " << argv[0] << " num-classes num-samples\n";      return 1; @@ -54,10 +88,13 @@ int main(int argc, char** argv) {    MT19937 rng;    cerr << "INITIALIZING RANDOM TOPIC ASSIGNMENTS\n";    zji.resize(wji.size()); -  double beta = 0.1; -  double alpha = 50.0 / num_classes; -  vector<CRP<int> > dr(zji.size(), CRP<int>(beta)); // dr[i] describes the probability of using a topic in document i -  vector<CRP<int> > wr(num_classes, CRP<int>(alpha)); // wr[k] describes the probability of generating a word in topic k +  double disc = 0.05; +  double beta = 10.0; +  double alpha = 50.0; +  double uniform_topic = 1.0 / num_classes; +  double uniform_word = 1.0 / TD::NumWords(); +  vector<CCRP<int> > dr(zji.size(), CCRP<int>(disc, beta)); // dr[i] describes the probability of using a topic in document i +  vector<CCRP<int> > wr(num_classes, CCRP<int>(disc, alpha)); // wr[k] describes the probability of generating a word in topic k    for (int j = 0; j < zji.size(); ++j) {      const size_t num_words = wji[j].size();      vector<int>& zj = zji[j]; @@ -68,19 +105,15 @@ int main(int argc, char** argv) {        if (random_topic == num_classes) { --random_topic; }        zj[i] = random_topic;        const int word = wj[i]; -      dr[j].increment(random_topic); -      wr[random_topic].increment(word); +      dr[j].increment(random_topic, uniform_topic, &rng); +      wr[random_topic].increment(word, uniform_word, &rng);      }    }    cerr << "SAMPLING\n";    vector<map<WordID, int> > t2w(num_classes);    Timer timer; -  SampleSet ss; +  SampleSet<double> ss;    const int num_types = TD::NumWords(); -  const prob_t class_p0(1.0 / num_classes); -  const prob_t word_p0(1.0 / num_types); -  cerr << "CLASS PRIOR    PROB: " << class_p0 << endl; -  cerr << " WORD PRIOR LOGPROB: " << log(word_p0) << endl;    ss.resize(num_classes);    double total_time = 0;    for (int iter = 0; iter < num_iterations; ++iter) { @@ -88,23 +121,6 @@ int main(int argc, char** argv) {      if (iter && iter % 10 == 0) {        total_time += timer.Elapsed();        timer.Reset(); -      prob_t lh = prob_t::One(); -      for (int j = 0; j < zji.size(); ++j) { -        const size_t num_words = wji[j].size(); -        vector<int>& zj = zji[j]; -        const vector<int>& wj = wji[j]; -        for (int i = 0; i < num_words; ++i) { -          const int word = wj[i]; -          const int cur_topic = zj[i]; -          lh *= dr[j].prob(cur_topic, class_p0); -          lh *= wr[cur_topic].prob(word, word_p0); -          if (iter > burnin_size) { -            ++t2w[cur_topic][word]; -          } -        } -      } -      if (iter && iter % 40 == 0) { cerr << " [ITER=" << iter << " SEC/SAMPLE=" << (total_time / 40) << " LLH=" << log(lh) << "]\n"; total_time=0; } -      //cerr << "ITERATION " << iter << " LOG LIKELIHOOD: " << log(lh) << endl;      }      for (int j = 0; j < zji.size(); ++j) {        const size_t num_words = wji[j].size(); @@ -113,16 +129,19 @@ int main(int argc, char** argv) {        for (int i = 0; i < num_words; ++i) {          const int word = wj[i];          const int cur_topic = zj[i]; -        dr[j].decrement(cur_topic); -        wr[cur_topic].decrement(word); +        dr[j].decrement(cur_topic, &rng); +        wr[cur_topic].decrement(word, &rng);          for (int k = 0; k < num_classes; ++k) { -          ss[k]= dr[j].prob(k, class_p0) * wr[k].prob(word, word_p0); +          ss[k]= dr[j].prob(k, uniform_topic) * wr[k].prob(word, uniform_word);          }          const int new_topic = rng.SelectSample(ss); -        dr[j].increment(new_topic); -        wr[new_topic].increment(word); +        dr[j].increment(new_topic, uniform_topic, &rng); +        wr[new_topic].increment(word, uniform_word, &rng);          zj[i] = new_topic; +        if (iter > burnin_size) { +          ++t2w[cur_topic][word]; +        }        }      }    }  | 
