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+#ifndef _ALIGNER_H_
+
+#include <string>
+#include <iostream>
+#include <boost/shared_ptr.hpp>
+#include "array2d.h"
+#include "lattice.h"
+
+class Hypergraph;
+
+struct AlignerTools {
+ static boost::shared_ptr<Array2D<bool> > ReadPharaohAlignmentGrid(const std::string& al);
+ static void SerializePharaohFormat(const Array2D<bool>& alignment, std::ostream* out);
+
+ // assumption: g contains derivations of input/ref and
+ // ONLY input/ref.
+ static void WriteAlignment(const std::string& input,
+ const Lattice& ref,
+ const Hypergraph& g,
+ bool map_instead_of_viterbi = true);
+};
+
+#endif