diff options
89 files changed, 1321 insertions, 3801 deletions
@@ -1,6 +1,17 @@ +Testing/ +*/Testing/ +training/Testing/ +utils/Testing/ +CTestTestfile.cmake +cmake_install.cmake +CMakeCache.txt +CMakeFiles  utils/dedup_corpus  klm/lm/builder/dump_counts  klm/util/cat_compressed +example_extff/libff_example.1.0.0.dylib +example_extff/libff_example.1.dylib +example_extff/libff_example.dylib  example_extff/ff_example.lo  example_extff/libff_example.la  mteval/meteor_jar.cc diff --git a/CMakeLists.txt b/CMakeLists.txt new file mode 100644 index 00000000..21c2a230 --- /dev/null +++ b/CMakeLists.txt @@ -0,0 +1,36 @@ +cmake_minimum_required(VERSION 2.8) + +add_definitions(-DKENLM_MAX_ORDER=6) +set(CMAKE_MODULE_PATH ${PROJECT_SOURCE_DIR}/cmake) +set(CMAKE_CXX_FLAGS "-Wall -std=c++11 -O3") +set(METEOR_JAR "" CACHE FILEPATH "Path to meteor.jar") + +enable_testing() +include_directories(${CMAKE_CURRENT_SOURCE_DIR}) + +#### packages +find_package(ZLIB REQUIRED) +find_package(BZip2 REQUIRED) + +# for pycdec +find_package(PythonInterp 2.7 REQUIRED) + +find_package(Boost COMPONENTS regex filesystem serialization program_options unit_test_framework system thread REQUIRED) +include_directories(${Boost_INCLUDE_DIR}) + +configure_file(${CMAKE_CURRENT_SOURCE_DIR}/config.h.cmake ${CMAKE_CURRENT_BINARY_DIR}/config.h) + +add_subdirectory(utils) +add_subdirectory(klm/util/double-conversion) +add_subdirectory(klm/util) +add_subdirectory(klm/util/stream) +add_subdirectory(klm/lm) +add_subdirectory(klm/lm/builder) +add_subdirectory(klm/search) +add_subdirectory(mteval) +add_subdirectory(decoder) +add_subdirectory(training) +add_subdirectory(word-aligner) +add_subdirectory(extractor) +add_subdirectory(example_extff) + diff --git a/LICENSE.cctbx.txt b/LICENSE.cctbx.txt deleted file mode 100644 index a8d9a494..00000000 --- a/LICENSE.cctbx.txt +++ /dev/null @@ -1,45 +0,0 @@ -*** License agreement *** - -cctbx Copyright (c) 2006, The Regents of the University of -California, through Lawrence Berkeley National Laboratory (subject to -receipt of any required approvals from the U.S. Dept. of Energy).  All -rights reserved. - -Redistribution and use in source and binary forms, with or without -modification, are permitted provided that the following conditions are met: - -(1) Redistributions of source code must retain the above copyright -notice, this list of conditions and the following disclaimer. - -(2) Redistributions in binary form must reproduce the above copyright -notice, this list of conditions and the following disclaimer in the -documentation and/or other materials provided with the distribution. - -(3) Neither the name of the University of California, Lawrence Berkeley -National Laboratory, U.S. Dept. of Energy nor the names of its -contributors may be used to endorse or promote products derived from -this software without specific prior written permission. - -THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS -IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED -TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A -PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER -OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, -EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, -PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR -PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF -LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING -NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS -SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. - -You are under no obligation whatsoever to provide any bug fixes, -patches, or upgrades to the features, functionality or performance of -the source code ("Enhancements") to anyone; however, if you choose to -make your Enhancements available either publicly, or directly to -Lawrence Berkeley National Laboratory, without imposing a separate -written license agreement for such Enhancements, then you hereby grant -the following license: a  non-exclusive, royalty-free perpetual license -to install, use, modify, prepare derivative works, incorporate into -other computer software, distribute, and sublicense such enhancements or -derivative works thereof, in binary and source code form. - diff --git a/Makefile.am b/Makefile.am deleted file mode 100644 index a2d2f332..00000000 --- a/Makefile.am +++ /dev/null @@ -1,23 +0,0 @@ -# warning - the subdirectories in the following list should -# be kept in topologically sorted order. Also, DO NOT introduce -# cyclic dependencies between these directories! -SUBDIRS = \ -  utils \ -  klm/util/double-conversion \ -  klm/util \ -  klm/util/stream \ -  klm/lm \ -  klm/lm/builder \ -  klm/search \ -  mteval \ -  decoder \ -  training \ -  word-aligner \ -  extractor \ -  example_extff - - -EXTRA_DIST = corpus tests python/cdec python/tests python/examples compound-split environment -AUTOMAKE_OPTIONS = foreign -ACLOCAL_AMFLAGS = -I m4 -AM_CPPFLAGS = -D_GLIBCXX_PARALLEL -march=native -mtune=native -O2 -pipe -fomit-frame-pointer -Wall diff --git a/README.cmake b/README.cmake new file mode 100644 index 00000000..4653bee6 --- /dev/null +++ b/README.cmake @@ -0,0 +1,3 @@ + +    cmake -G 'Unix Makefiles' -DMETEOR_JAR=/Users/cdyer/software/meteor-1.5/meteor-1.5.jar + diff --git a/cmake/FindGMock.cmake b/cmake/FindGMock.cmake new file mode 100644 index 00000000..2ad92212 --- /dev/null +++ b/cmake/FindGMock.cmake @@ -0,0 +1,130 @@ +# Locate the Google C++ Mocking Framework. +# (This file is almost an identical copy of the original FindGTest.cmake file, +#  feel free to use it as it is or modify it for your own needs.) +# +# +# Defines the following variables: +# +#   GMOCK_FOUND - Found the Google Testing framework +#   GMOCK_INCLUDE_DIRS - Include directories +# +# Also defines the library variables below as normal +# variables. These contain debug/optimized keywords when +# a debugging library is found. +# +#   GMOCK_BOTH_LIBRARIES - Both libgmock & libgmock-main +#   GMOCK_LIBRARIES - libgmock +#   GMOCK_MAIN_LIBRARIES - libgmock-main +# +# Accepts the following variables as input: +# +#   GMOCK_ROOT - (as a CMake or environment variable) +#                The root directory of the gmock install prefix +# +#   GMOCK_MSVC_SEARCH - If compiling with MSVC, this variable can be set to +#                       "MD" or "MT" to enable searching a gmock build tree +#                       (defaults: "MD") +# +#----------------------- +# Example Usage: +# +#    find_package(GMock REQUIRED) +#    include_directories(${GMOCK_INCLUDE_DIRS}) +# +#    add_executable(foo foo.cc) +#    target_link_libraries(foo ${GMOCK_BOTH_LIBRARIES}) +# +#============================================================================= +# This file is released under the MIT licence: +# +# Copyright (c) 2011 Matej Svec +# +# Permission is hereby granted, free of charge, to any person obtaining a copy +# of this software and associated documentation files (the "Software"), to +# deal in the Software without restriction, including without limitation the +# rights to use, copy, modify, merge, publish, distribute, sublicense, and/or +# sell copies of the Software, and to permit persons to whom the Software is +# furnished to do so, subject to the following conditions: +# +# The above copyright notice and this permission notice shall be included in +# all copies or substantial portions of the Software. +# +# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR +# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, +# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE +# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER +# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING +# FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS +# IN THE SOFTWARE. +#============================================================================= + + +function(_gmock_append_debugs _endvar _library) +  if(${_library} AND ${_library}_DEBUG) +    set(_output optimized ${${_library}} debug ${${_library}_DEBUG}) +  else() +    set(_output ${${_library}}) +  endif() +  set(${_endvar} ${_output} PARENT_SCOPE) +endfunction() + +function(_gmock_find_library _name) +  find_library(${_name} +    NAMES ${ARGN} +    HINTS +      $ENV{GMOCK_ROOT} +      ${GMOCK_ROOT} +    PATH_SUFFIXES ${_gmock_libpath_suffixes} +  ) +  mark_as_advanced(${_name}) +endfunction() + + +if(NOT DEFINED GMOCK_MSVC_SEARCH) +  set(GMOCK_MSVC_SEARCH MD) +endif() + +set(_gmock_libpath_suffixes lib) +if(MSVC) +  if(GMOCK_MSVC_SEARCH STREQUAL "MD") +    list(APPEND _gmock_libpath_suffixes +      msvc/gmock-md/Debug +      msvc/gmock-md/Release) +  elseif(GMOCK_MSVC_SEARCH STREQUAL "MT") +    list(APPEND _gmock_libpath_suffixes +      msvc/gmock/Debug +      msvc/gmock/Release) +  endif() +endif() + +find_path(GMOCK_INCLUDE_DIR gmock/gmock.h +  HINTS +    $ENV{GMOCK_ROOT}/include +    ${GMOCK_ROOT}/include +) +mark_as_advanced(GMOCK_INCLUDE_DIR) + +if(MSVC AND GMOCK_MSVC_SEARCH STREQUAL "MD") +  # The provided /MD project files for Google Mock add -md suffixes to the +  # library names. +  _gmock_find_library(GMOCK_LIBRARY            gmock-md  gmock) +  _gmock_find_library(GMOCK_LIBRARY_DEBUG      gmock-mdd gmockd) +  _gmock_find_library(GMOCK_MAIN_LIBRARY       gmock_main-md  gmock_main) +  _gmock_find_library(GMOCK_MAIN_LIBRARY_DEBUG gmock_main-mdd gmock_maind) +else() +  _gmock_find_library(GMOCK_LIBRARY            gmock) +  _gmock_find_library(GMOCK_LIBRARY_DEBUG      gmockd) +  _gmock_find_library(GMOCK_MAIN_LIBRARY       gmock_main) +  _gmock_find_library(GMOCK_MAIN_LIBRARY_DEBUG gmock_maind) +endif() + +include(FindPackageHandleStandardArgs) +FIND_PACKAGE_HANDLE_STANDARD_ARGS(GMock DEFAULT_MSG GMOCK_LIBRARY GMOCK_INCLUDE_DIR GMOCK_MAIN_LIBRARY) + +if(GMOCK_FOUND) +  set(GMOCK_INCLUDE_DIRS ${GMOCK_INCLUDE_DIR}) +  _gmock_append_debugs(GMOCK_LIBRARIES      GMOCK_LIBRARY) +  _gmock_append_debugs(GMOCK_MAIN_LIBRARIES GMOCK_MAIN_LIBRARY) +  set(GMOCK_BOTH_LIBRARIES ${GMOCK_LIBRARIES} ${GMOCK_MAIN_LIBRARIES}) +endif() + diff --git a/config.h.cmake b/config.h.cmake new file mode 100644 index 00000000..aa0a9f4a --- /dev/null +++ b/config.h.cmake @@ -0,0 +1,6 @@ +#ifndef CONFIG_H +#define CONFIG_H +  +#cmakedefine METEOR_JAR "@METEOR_JAR@" + +#endif // CONFIG_H diff --git a/configure.ac b/configure.ac deleted file mode 100644 index 36cee5af..00000000 --- a/configure.ac +++ /dev/null @@ -1,244 +0,0 @@ -AC_CONFIG_MACRO_DIR([m4]) -AC_INIT([cdec],[2014-10-12]) -AC_CONFIG_SRCDIR([decoder/cdec.cc]) -AM_INIT_AUTOMAKE -AC_CONFIG_HEADERS(config.h) -AC_PROG_LIBTOOL -AC_PROG_LEX -case $LEX in -:) AC_MSG_ERROR([No lex (Flex, lex, etc.) program found]);; -esac -OLD_CXXFLAGS=$CXXFLAGS -AC_PROG_CC -AC_PROG_CXX -CXXFLAGS=$OLD_CXXFLAGS -AX_PTHREAD -AX_CXX_COMPILE_STDCXX_11([],[mandatory]) -AC_LANG_CPLUSPLUS -AC_OPENMP -AC_CHECK_LIB(rt, clock_gettime) -BOOST_REQUIRE([1.44]) -BOOST_FILESYSTEM -BOOST_PROGRAM_OPTIONS -BOOST_SYSTEM -BOOST_REGEX -BOOST_SERIALIZATION -BOOST_TEST -BOOST_THREADS -AM_PATH_PYTHON -AC_CHECK_HEADER(dlfcn.h,AC_DEFINE(HAVE_DLFCN_H)) -AC_CHECK_LIB(dl, dlopen) -AC_CHECK_HEADERS(zlib.h, -    AC_CHECK_LIB(z, gzread,[ -        AC_DEFINE(HAVE_ZLIB,[],[Do we have zlib]) -        ZLIBS="$ZLIBS -lz" -    ])) - -AC_CHECK_HEADERS(bzlib.h, -    AC_CHECK_LIB(bz2, BZ2_bzReadOpen,[ -        AC_DEFINE(HAVE_BZLIB,[],[Do we have bzlib]) -        ZLIBS="$ZLIBS -lbz2" -    ])) - -AC_CHECK_HEADERS(lzma.h, -    AC_CHECK_LIB(lzma, lzma_code,[ -        AC_DEFINE(HAVE_XZLIB,[],[Do we have lzma]) -        ZLIBS="$ZLIBS -llzma" -    ])) - -AC_ARG_ENABLE(mpi, - [ --enable-mpi  Build MPI binaries, assumes mpi.h is present ], - [ mpi=yes - ]) -AM_CONDITIONAL([MPI], [test "x$mpi" = xyes]) - -if test "x$mpi" = xyes -then -  AC_DEFINE([HAVE_MPI], [1], [flag for MPI]) -  BOOST_MPI -  #LIBS="$LIBS -lboost_mpi" -fi - -AM_CONDITIONAL([HAVE_METEOR], false) -AC_ARG_WITH(meteor, -            [AC_HELP_STRING([--with-meteor=PATH], [(optional) path to METEOR jar])], -            [with_meteor=$withval], -            [with_meteor=no] -           ) - -if test "x$with_meteor" != 'xno' -then -  AC_CHECK_FILE([$with_meteor], -                [AC_DEFINE([HAVE_METEOR], [1], [flag for METEOR jar library])], -                [AC_MSG_ERROR([Cannot find METEOR jar!])]) -  AC_SUBST(METEOR_JAR,"${with_meteor}") -  AM_CONDITIONAL([HAVE_METEOR], true) -fi - -AM_CONDITIONAL([HAVE_CMPH], false) -AC_ARG_WITH(cmph, -            [AC_HELP_STRING([--with-cmph=PATH], [(optional) path to cmph perfect hashing library])], -            [with_cmph=$withval], -            [with_cmph=no] -           ) - -if test "x$with_cmph" != 'xno' -then -  SAVE_CPPFLAGS="$CPPFLAGS" -  CPPFLAGS="$CPPFLAGS -I${with_cmph}/include" - -  AC_CHECK_HEADER(cmph.h, -                 [AC_DEFINE([HAVE_CMPH], [1], [flag for cmph perfect hashing library])], -                 [AC_MSG_ERROR([Cannot find cmph library!])]) - -  LDFLAGS="$LDFLAGS -L${with_cmph}/lib" -  AC_CHECK_LIB(cmph, cmph_search) -  AM_CONDITIONAL([HAVE_CMPH], true) -fi - -AM_CONDITIONAL([HAVE_GTEST], false) -AC_ARG_WITH(gtest, -            [AC_HELP_STRING([--with-gtest=DIR], [(optional) path to Google Test library])], -            [with_gtest=$withval], -            [with_gtest=no] -           ) - -AM_CONDITIONAL([HAVE_GMOCK], false) -AC_ARG_WITH(gmock, -            [AC_HELP_STRING([--with-gmock=DIR], [(optional) path to Google Mock library])], -            [with_gmock=$withval], -            [with_gmock=no] -           ) - -if test "x$with_gtest" != 'xno' -then -  gtest_CPPFLAGS="-I${with_gtest}/include" -  gtest_LDFLAGS="-L${with_gtest} -L${with_gtest}/lib" -  gtest_LIBS="-lgtest_main -lgtest -lpthread" - -  SAVECPP_FLAGS="$CPPFLAGS" -  CPPFLAGS="$CPPFLAGS $gtest_CPPFLAGS" -  AC_CHECK_HEADER(${with_gtest}/include/gtest/gtest.h, -                  [AC_DEFINE([HAVE_GTEST], [1], [flag for Google Test header])], -                  [AC_MSG_ERROR([Cannot find Google Test headers!])] -                 ) - -  SAVE_LDFLAGS="$LDFLAGS" -  LDFLAGS="$LDFLAGS $gtest_LDFLAGS" -  SAVE_LIBS="$LIBS" -  # Google Test needs pthreads. -  AC_CHECK_LIB([pthread], -               [pthread_mutex_init], -               [], -               [AC_MSG_ERROR([Cannot find pthread library])] -              ) -  AX_CXX_CHECK_LIB([gtest], -                   [testing::TestInfo::name() const], -                   [], -                   [AC_MSG_ERROR([Cannot find Google Test library libgtest])] -                  ) -  AC_CHECK_LIB([gtest_main], -               [main], -               [], -               [AC_MSG_ERROR([Cannot find Google Test library libgtest_main])] -              ) - -  AC_SUBST(AS_TR_CPP([GTEST_CPPFLAGS]), ["$gtest_CPPFLAGS"]) -  AC_SUBST(AS_TR_CPP([GTEST_LDFLAGS]), ["$gtest_LDFLAGS"]) -  AC_SUBST(AS_TR_CPP([GTEST_LIBS]), ["$gtest_LIBS"]) - - -  if test "x$with_gmock" != 'xno' -  then -    gmock_CPPFLAGS="-I${with_gmock}/include" -    gmock_LDFLAGS="-L${with_gmock} -L${with_gmock}/lib" -    gmock_LIBS="-lgmock" - -    CPPFLAGS="$CPPFLAGS $gmock_CPPFLAGS" -    AC_CHECK_HEADER(${with_gmock}/include/gmock/gmock.h, -                    [AC_DEFINE([HAVE_GMOCK], [1], [flag for Google Mock header])], -                    [AC_MSG_ERROR([Cannot find Google Mock headers!])] -                   ) - -    LDFLAGS="$LDFLAGS $gmock_LDFLAGS" -    AX_CXX_CHECK_LIB([gmock], -                     [testing::Expectation], -                     [], -                     [AC_MSG_ERROR([Cannot find Google Mock library libgmock])] -                    ) - -    AC_SUBST(AS_TR_CPP([GMOCK_CPPFLAGS]), ["$gmock_CPPFLAGS"]) -    AC_SUBST(AS_TR_CPP([GMOCK_LDFLAGS]), ["$gmock_LDFLAGS"]) -    AC_SUBST(AS_TR_CPP([GMOCK_LIBS]), ["$gmock_LIBS"]) -    AM_CONDITIONAL([HAVE_GMOCK], true) -  fi - -  CPPFLAGS="$SAVE_CPPFLAGS" -  LDFLAGS="$SAVE_LDFLAGS" -  LIBS="$SAVE_LIBS" -  AM_CONDITIONAL([HAVE_GTEST], true) -fi - -# Enable static linking -AC_ARG_WITH( -  [static], -  AS_HELP_STRING([--with-static], [Statically link binaries when possible]), -  AC_SUBST(AS_TR_CPP([STATIC_FLAGS]), ["-all-static"]), -) - -#BOOST_THREADS -CPPFLAGS="$CPPFLAGS $BOOST_CPPFLAGS" -LDFLAGS="$LDFLAGS $BOOST_PROGRAM_OPTIONS_LDFLAGS $BOOST_REGEX_LDFLAGS $BOOST_SERIALIZATION_LDFLAGS $BOOST_SYSTEM_LDFLAGS $BOOST_FILESYSTEM_LDFLAGS" -# $BOOST_THREAD_LDFLAGS" -LIBS="$LIBS $BOOST_PROGRAM_OPTIONS_LIBS $BOOST_REGEX_LIBS $BOOST_SERIALIZATION_LIBS $BOOST_SYSTEM_LIBS $BOOST_FILESYSTEM_LIBS $ZLIBS" -# $BOOST_THREAD_LIBS" - -AC_CHECK_HEADER(google/dense_hash_map, -               [AC_DEFINE([HAVE_SPARSEHASH], [1], [flag for google::dense_hash_map])]) - -AC_PROG_INSTALL - -CPPFLAGS="-DPIC $CPPFLAGS -DHAVE_CONFIG_H -DKENLM_MAX_ORDER=6" -CXXFLAGS="$CXX11_SWITCH $CXXFLAGS -fPIC -g -O3" -CFLAGS="$CFLAGS -fPIC -g -O3" - -if test "x$HAVE_CXX11" = "x0"; then -  CPPFLAGS="$CPPFLAGS -DHAVE_OLD_CPP" -fi - -# core cdec stuff -AC_CONFIG_FILES([Makefile]) -AC_CONFIG_FILES([utils/Makefile]) -AC_CONFIG_FILES([mteval/Makefile]) -AC_CONFIG_FILES([mteval/meteor_jar.cc]) -AC_CONFIG_FILES([decoder/Makefile]) -AC_CONFIG_FILES([python/setup.py]) -AC_CONFIG_FILES([extractor/Makefile]) -AC_CONFIG_FILES([word-aligner/Makefile]) - -# KenLM stuff -AC_CONFIG_FILES([klm/util/double-conversion/Makefile]) -AC_CONFIG_FILES([klm/util/stream/Makefile]) -AC_CONFIG_FILES([klm/util/Makefile]) -AC_CONFIG_FILES([klm/lm/Makefile]) -AC_CONFIG_FILES([klm/search/Makefile]) -AC_CONFIG_FILES([klm/lm/builder/Makefile]) - -# training stuff -AC_CONFIG_FILES([training/Makefile]) -AC_CONFIG_FILES([training/utils/Makefile]) -AC_CONFIG_FILES([training/liblbfgs/Makefile]) -AC_CONFIG_FILES([training/crf/Makefile]) -AC_CONFIG_FILES([training/dpmert/Makefile]) -AC_CONFIG_FILES([training/pro/Makefile]) -AC_CONFIG_FILES([training/rampion/Makefile]) -AC_CONFIG_FILES([training/minrisk/Makefile]) -AC_CONFIG_FILES([training/mira/Makefile]) -AC_CONFIG_FILES([training/latent_svm/Makefile]) -AC_CONFIG_FILES([training/dtrain/Makefile]) -AC_CONFIG_FILES([training/const_reorder/Makefile]) - -# external feature function example code -AC_CONFIG_FILES([example_extff/Makefile]) - -AC_OUTPUT diff --git a/decoder/CMakeLists.txt b/decoder/CMakeLists.txt new file mode 100644 index 00000000..591ab7b3 --- /dev/null +++ b/decoder/CMakeLists.txt @@ -0,0 +1,179 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../mteval) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../klm) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/..) + +PROJECT(decoder C CXX) + +find_package(FLEX REQUIRED) + +FLEX_TARGET(RuleLexer rule_lexer.ll ${CMAKE_CURRENT_BINARY_DIR}/rule_lexer.cc) + +set(libcdec_SRCS +    aligner.h +    apply_models.h +    bottom_up_parser.h +    bottom_up_parser-rs.h +    csplit.h +    decoder.h +    earley_composer.h +    factored_lexicon_helper.h +    ff.h +    ff_basic.h +    ff_bleu.h +    ff_charset.h +    ff_conll.h +    ff_const_reorder_common.h +    ff_const_reorder.h +    ff_context.h +    ff_csplit.h +    ff_external.h +    ff_factory.h +    ff_klm.h +    ff_lexical.h +    ff_lm.h +    ff_ngrams.h +    ff_parse_match.h +    ff_register.h +    ff_rules.h +    ff_ruleshape.h +    ff_sample_fsa.h +    ff_soft_syn.h +    ff_soft_syntax.h +    ff_soft_syntax_mindist.h +    ff_source_path.h +    ff_source_syntax.h +    ff_source_syntax2.h +    ff_spans.h +    ff_tagger.h +    ff_wordalign.h +    ff_wordset.h +    ffset.h +    forest_writer.h +    freqdict.h +    grammar.h +    hg.h +    hg_intersect.h +    hg_io.h +    hg_remove_eps.h +    hg_sampler.h +    hg_test.h +    hg_union.h +    incremental.h +    inside_outside.h +    kbest.h +    lattice.h +    lexalign.h +    lextrans.h +    nt_span.h +    oracle_bleu.h +    phrasebased_translator.h +    phrasetable_fst.h +    program_options.h +    rule_lexer.h +    sentence_metadata.h +    sentences.h +    tagger.h +    translator.h +    trule.h +    viterbi.h +    aligner.cc +    apply_models.cc +    bottom_up_parser.cc +    bottom_up_parser-rs.cc +    cdec_ff.cc +    csplit.cc +    decoder.cc +    earley_composer.cc +    factored_lexicon_helper.cc +    ff.cc +    ff_basic.cc +    ff_bleu.cc +    ff_charset.cc +    ff_conll.cc +    ff_context.cc +    ff_const_reorder.cc +    ff_csplit.cc +    ff_external.cc +    ff_factory.cc +    ff_klm.cc +    ff_lm.cc +    ff_ngrams.cc +    ff_parse_match.cc +    ff_rules.cc +    ff_ruleshape.cc +    ff_soft_syn.cc +    ff_soft_syntax.cc +    ff_soft_syntax_mindist.cc +    ff_source_path.cc +    ff_source_syntax.cc +    ff_source_syntax2.cc +    ff_spans.cc +    ff_tagger.cc +    ff_wordalign.cc +    ff_wordset.cc +    ffset.cc +    forest_writer.cc +    fst_translator.cc +    tree2string_translator.cc +    grammar.cc +    hg.cc +    hg_intersect.cc +    hg_io.cc +    hg_remove_eps.cc +    hg_sampler.cc +    hg_union.cc +    incremental.cc +    lattice.cc +    lexalign.cc +    lextrans.cc +    node_state_hash.h +    tree_fragment.cc +    tree_fragment.h +    maxtrans_blunsom.cc +    phrasebased_translator.cc +    phrasetable_fst.cc +    rescore_translator.cc +    ${FLEX_RuleLexer_OUTPUTS} +    scfg_translator.cc +    tagger.cc +    translator.cc +    trule.cc +    viterbi.cc) + +add_library(libcdec STATIC ${libcdec_SRCS}) + +set(cdec_SRCS cdec.cc) +add_executable(cdec ${cdec_SRCS}) +target_link_libraries(cdec libcdec mteval utils ksearch klm klm_util klm_util_double ${Boost_LIBRARIES} ${ZLIB_LIBRARIES}) + +set(TEST_SRCS +  grammar_test.cc +  hg_test.cc +  parser_test.cc +  t2s_test.cc +  trule_test.cc) + +foreach(testSrc ${TEST_SRCS}) +  #Extract the filename without an extension (NAME_WE) +  get_filename_component(testName ${testSrc} NAME_WE) + +  #Add compile target +  set_source_files_properties(${testSrc} PROPERTIES COMPILE_FLAGS "-DBOOST_TEST_DYN_LINK -DTEST_DATA=\\\"test_data/\\\"") +  add_executable(${testName} ${testSrc}) + +  #link to Boost libraries AND your targets and dependencies +  target_link_libraries(${testName} libcdec mteval utils ksearch klm klm_util klm_util_double ${Boost_LIBRARIES} ${ZLIB_LIBRARIES}) + +  #I like to move testing binaries into a testBin directory +  set_target_properties(${testName} PROPERTIES  +      RUNTIME_OUTPUT_DIRECTORY  ${CMAKE_CURRENT_SOURCE_DIR}) + +  #Finally add it to test execution -  +  #Notice the WORKING_DIRECTORY and COMMAND +  add_test(NAME ${testName} COMMAND ${CMAKE_CURRENT_SOURCE_DIR}/${testName}  +     WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}) +endforeach(testSrc) + + + diff --git a/decoder/Makefile.am b/decoder/Makefile.am deleted file mode 100644 index dbec532e..00000000 --- a/decoder/Makefile.am +++ /dev/null @@ -1,166 +0,0 @@ -bin_PROGRAMS = cdec - -noinst_PROGRAMS = \ -  trule_test \ -  hg_test \ -  parser_test \ -  t2s_test \ -  grammar_test - -TESTS = trule_test parser_test grammar_test hg_test -t2s_test_SOURCES = t2s_test.cc -t2s_test_LDADD = $(BOOST_UNIT_TEST_FRAMEWORK_LDFLAGS) $(BOOST_UNIT_TEST_FRAMEWORK_LIBS) libcdec.a ../mteval/libmteval.a ../utils/libutils.a -parser_test_SOURCES = parser_test.cc -parser_test_LDADD = $(BOOST_UNIT_TEST_FRAMEWORK_LDFLAGS) $(BOOST_UNIT_TEST_FRAMEWORK_LIBS) libcdec.a ../mteval/libmteval.a ../utils/libutils.a -grammar_test_SOURCES = grammar_test.cc -grammar_test_LDADD = $(BOOST_UNIT_TEST_FRAMEWORK_LDFLAGS) $(BOOST_UNIT_TEST_FRAMEWORK_LIBS) libcdec.a ../mteval/libmteval.a ../utils/libutils.a -hg_test_SOURCES = hg_test.cc -hg_test_LDADD = $(BOOST_UNIT_TEST_FRAMEWORK_LDFLAGS) $(BOOST_UNIT_TEST_FRAMEWORK_LIBS) libcdec.a ../mteval/libmteval.a ../utils/libutils.a -trule_test_SOURCES = trule_test.cc -trule_test_LDADD = $(BOOST_UNIT_TEST_FRAMEWORK_LDFLAGS) $(BOOST_UNIT_TEST_FRAMEWORK_LIBS) libcdec.a ../mteval/libmteval.a ../utils/libutils.a - -cdec_SOURCES = cdec.cc -cdec_LDFLAGS= -rdynamic $(STATIC_FLAGS) -cdec_LDADD = libcdec.a ../mteval/libmteval.a ../utils/libutils.a ../klm/search/libksearch.a ../klm/lm/libklm.a ../klm/util/libklm_util.a ../klm/util/double-conversion/libklm_util_double.a - -AM_CPPFLAGS = -DTEST_DATA=\"$(top_srcdir)/decoder/test_data\" -DBOOST_TEST_DYN_LINK -W -Wno-sign-compare -I$(top_srcdir) -I$(top_srcdir)/mteval -I$(top_srcdir)/utils -I$(top_srcdir)/klm - -rule_lexer.cc: rule_lexer.ll -	$(LEX) -s -CF -8 -o$@ $< - -noinst_LIBRARIES = libcdec.a - -EXTRA_DIST = test_data rule_lexer.ll - -libcdec_a_SOURCES = \ -  aligner.h \ -  apply_models.h \ -  bottom_up_parser.h \ -  bottom_up_parser-rs.h \ -  csplit.h \ -  decoder.h \ -  earley_composer.h \ -  factored_lexicon_helper.h \ -  ff.h \ -  ff_basic.h \ -  ff_bleu.h \ -  ff_charset.h \ -  ff_conll.h \ -  ff_const_reorder_common.h \ -  ff_const_reorder.h \ -  ff_context.h \ -  ff_csplit.h \ -  ff_external.h \ -  ff_factory.h \ -  ff_klm.h \ -  ff_lexical.h \ -  ff_lm.h \ -  ff_ngrams.h \ -  ff_parse_match.h \ -  ff_register.h \ -  ff_rules.h \ -  ff_ruleshape.h \ -  ff_sample_fsa.h \ -  ff_soft_syn.h \ -  ff_soft_syntax.h \ -  ff_soft_syntax_mindist.h \ -  ff_source_path.h \ -  ff_source_syntax.h \ -  ff_source_syntax2.h \ -  ff_spans.h \ -  ff_tagger.h \ -  ff_wordalign.h \ -  ff_wordset.h \ -  ffset.h \ -  forest_writer.h \ -  freqdict.h \ -  grammar.h \ -  hg.h \ -  hg_intersect.h \ -  hg_io.h \ -  hg_remove_eps.h \ -  hg_sampler.h \ -  hg_test.h \ -  hg_union.h \ -  incremental.h \ -  inside_outside.h \ -  kbest.h \ -  lattice.h \ -  lexalign.h \ -  lextrans.h \ -  nt_span.h \ -  oracle_bleu.h \ -  phrasebased_translator.h \ -  phrasetable_fst.h \ -  program_options.h \ -  rule_lexer.h \ -  sentence_metadata.h \ -  sentences.h \ -  tagger.h \ -  translator.h \ -  trule.h \ -  viterbi.h \ -  aligner.cc \ -  apply_models.cc \ -  bottom_up_parser.cc \ -  bottom_up_parser-rs.cc \ -  cdec.cc \ -  cdec_ff.cc \ -  csplit.cc \ -  decoder.cc \ -  earley_composer.cc \ -  factored_lexicon_helper.cc \ -  ff.cc \ -  ff_basic.cc \ -  ff_bleu.cc \ -  ff_charset.cc \ -  ff_conll.cc \ -  ff_context.cc \ -  ff_const_reorder.cc \ -  ff_csplit.cc \ -  ff_external.cc \ -  ff_factory.cc \ -  ff_klm.cc \ -  ff_lm.cc \ -  ff_ngrams.cc \ -  ff_parse_match.cc \ -  ff_rules.cc \ -  ff_ruleshape.cc \ -  ff_soft_syn.cc \ -  ff_soft_syntax.cc \ -  ff_soft_syntax_mindist.cc \ -  ff_source_path.cc \ -  ff_source_syntax.cc \ -  ff_source_syntax2.cc \ -  ff_spans.cc \ -  ff_tagger.cc \ -  ff_wordalign.cc \ -  ff_wordset.cc \ -  ffset.cc \ -  forest_writer.cc \ -  fst_translator.cc \ -  tree2string_translator.cc \ -  grammar.cc \ -  hg.cc \ -  hg_intersect.cc \ -  hg_io.cc \ -  hg_remove_eps.cc \ -  hg_sampler.cc \ -  hg_union.cc \ -  incremental.cc \ -  lattice.cc \ -  lexalign.cc \ -  lextrans.cc \ -  node_state_hash.h \ -  tree_fragment.cc \ -  tree_fragment.h \ -  maxtrans_blunsom.cc \ -  phrasebased_translator.cc \ -  phrasetable_fst.cc \ -  rescore_translator.cc \ -  rule_lexer.cc \ -  scfg_translator.cc \ -  tagger.cc \ -  translator.cc \ -  trule.cc \ -  viterbi.cc diff --git a/decoder/apply_models.h b/decoder/apply_models.h index f03c973a..bfb37df1 100644 --- a/decoder/apply_models.h +++ b/decoder/apply_models.h @@ -3,9 +3,9 @@  #include <iostream> -struct ModelSet; -struct Hypergraph; -struct SentenceMetadata; +class ModelSet; +class Hypergraph; +class SentenceMetadata;  struct exhaustive_t {}; diff --git a/decoder/decoder.h b/decoder/decoder.h index a545206b..6250d1eb 100644 --- a/decoder/decoder.h +++ b/decoder/decoder.h @@ -25,7 +25,7 @@ private:  class SentenceMetadata;  class Hypergraph; -class DecoderImpl; +struct DecoderImpl;  class DecoderObserver {   public: @@ -38,7 +38,7 @@ class DecoderObserver {    virtual void NotifyDecodingComplete(const SentenceMetadata& smeta);  }; -class Grammar;  // TODO once the decoder interface is cleaned up, +struct Grammar;  // TODO once the decoder interface is cleaned up,                  // this should be somewhere else  class Decoder {   public: diff --git a/decoder/factored_lexicon_helper.h b/decoder/factored_lexicon_helper.h index 460bdebb..8e89f473 100644 --- a/decoder/factored_lexicon_helper.h +++ b/decoder/factored_lexicon_helper.h @@ -7,7 +7,7 @@  #include <map>  #include "tdict.h" -struct SentenceMetadata; +class SentenceMetadata;  // when computing features, it can be advantageous to:  //   1) back off to less specific forms (e.g., less highly inflected forms, POS tags, etc) diff --git a/decoder/ff_csplit.h b/decoder/ff_csplit.h index 227f2a14..1721ed38 100644 --- a/decoder/ff_csplit.h +++ b/decoder/ff_csplit.h @@ -6,7 +6,7 @@  #include "ff.h"  #include "klm/lm/model.hh" -class BasicCSplitFeaturesImpl; +struct BasicCSplitFeaturesImpl;  class BasicCSplitFeatures : public FeatureFunction {   public:    BasicCSplitFeatures(const std::string& param); @@ -22,7 +22,7 @@ class BasicCSplitFeatures : public FeatureFunction {    boost::shared_ptr<BasicCSplitFeaturesImpl> pimpl_;  }; -template <class M> class ReverseCharLMCSplitFeatureImpl; +template <class M> struct ReverseCharLMCSplitFeatureImpl;  class ReverseCharLMCSplitFeature : public FeatureFunction {   public:    ReverseCharLMCSplitFeature(const std::string& param); diff --git a/decoder/ff_klm.cc b/decoder/ff_klm.cc index 339a10c3..d395fb47 100644 --- a/decoder/ff_klm.cc +++ b/decoder/ff_klm.cc @@ -347,7 +347,6 @@ void KLanguageModel<Model>::TraversalFeaturesImpl(const SentenceMetadata& /* sme                                            SparseVector<double>* features,                                            SparseVector<double>* /*estimated_features*/,                                            void* state) const { -  double est = 0;    double oovs = 0;    double emit = 0;    features->set_value(fid_, pimpl_->LookupWords(*edge.rule_, ant_states, &oovs, &emit, state)); diff --git a/decoder/ff_klm.h b/decoder/ff_klm.h index c8350623..7a0b92ec 100644 --- a/decoder/ff_klm.h +++ b/decoder/ff_klm.h @@ -7,7 +7,7 @@  #include "ff_factory.h"  #include "ff.h" -template <class Model> struct KLanguageModelImpl; +template <class Model> class KLanguageModelImpl;  // the supported template types are instantiated explicitly  // in ff_klm.cc. diff --git a/decoder/ff_lm.cc b/decoder/ff_lm.cc index bc51076f..0780b266 100644 --- a/decoder/ff_lm.cc +++ b/decoder/ff_lm.cc @@ -211,7 +211,7 @@ class LanguageModelImpl : public LanguageModelInterface {    // may be shorter than actual null-terminated length.  context must be null terminated.  len is just to save effort for subclasses that don't support contextID    virtual int ContextSize(WordID const* context,int len) { -    unsigned ret; +    unsigned ret = 0;      //ngram_.contextID((VocabIndex*)context,ret);      return ret;    } diff --git a/decoder/ff_lm.h b/decoder/ff_lm.h index 83a2e186..740cc492 100644 --- a/decoder/ff_lm.h +++ b/decoder/ff_lm.h @@ -44,8 +44,7 @@ class LanguageModelInterface {    }  }; -struct LanguageModelImpl; - +class LanguageModelImpl;  class LanguageModel : public FeatureFunction {   public:    // param = "filename.lm [-o n]" diff --git a/decoder/ff_ngrams.cc b/decoder/ff_ngrams.cc index 38e1a60a..a45bd27d 100644 --- a/decoder/ff_ngrams.cc +++ b/decoder/ff_ngrams.cc @@ -33,11 +33,12 @@ struct State {    }    const State& operator=(const State<MAX_ORDER>& other) {      memcpy(state, other.state, sizeof(state)); +    return *this;    }    explicit State(const State<MAX_ORDER>& other, unsigned order, WordID extend) { -    char om1 = order - 1; +    unsigned om1 = order - 1;      if (!om1) { memset(state, 0, sizeof(state)); return; } -    for (char i = 1; i < om1; ++i) state[i - 1]= other.state[i]; +    for (unsigned i = 1; i < om1; ++i) state[i - 1]= other.state[i];      state[om1 - 1] = extend;    }    const WordID& operator[](size_t i) const { return state[i]; } @@ -249,8 +250,6 @@ class NgramDetectorImpl {   public:    void LookupWords(const TRule& rule, const vector<const void*>& ant_states, SparseVector<double>* feats, SparseVector<double>* est_feats, void* remnant) { -    double sum = 0.0; -    double est_sum = 0.0;      int num_scored = 0;      int num_estimated = 0;      bool saw_eos = false; @@ -264,7 +263,6 @@ class NgramDetectorImpl {          int unscored_ant_len = UnscoredSize(astate);          for (int k = 0; k < unscored_ant_len; ++k) {            const WordID cur_word = IthUnscoredWord(k, astate); -          const bool is_oov = (cur_word == 0);            SparseVector<double> p;            if (cur_word == kSOS_) {              state = BeginSentenceState(); diff --git a/decoder/ff_ngrams.h b/decoder/ff_ngrams.h index 5dea9a7d..05b25974 100644 --- a/decoder/ff_ngrams.h +++ b/decoder/ff_ngrams.h @@ -7,7 +7,7 @@  #include "ff.h" -struct NgramDetectorImpl; +class NgramDetectorImpl;  class NgramDetector : public FeatureFunction {   public:    // param = "filename.lm [-o <order>] [-U <unigram-prefix>] [-B <bigram-prefix>] [-T <trigram-prefix>] [-4 <4-gram-prefix>] [-5 <5-gram-prefix>] [-S <separator>] diff --git a/decoder/ff_spans.h b/decoder/ff_spans.h index e2475491..d0036340 100644 --- a/decoder/ff_spans.h +++ b/decoder/ff_spans.h @@ -62,7 +62,6 @@ class CMR2008ReorderingFeatures : public FeatureFunction {    // collapsed feature values    bool use_collapsed_features_; -  int fid_reorder_;    std::pair<double, double> uncoditioned_vals_;    std::vector<std::pair<double, double> > fvals_;  }; diff --git a/decoder/ff_wordalign.cc b/decoder/ff_wordalign.cc index dcb80110..5d4c80c7 100644 --- a/decoder/ff_wordalign.cc +++ b/decoder/ff_wordalign.cc @@ -28,8 +28,6 @@ namespace std { using std::tr1::unordered_map; }  #include "tdict.h"   // Blunsom hack  #include "filelib.h" // Blunsom hack -static const int MAX_SENTENCE_SIZE = 100; -  static const int kNULL_i = 255;  // -1 as an unsigned char  using namespace std; diff --git a/decoder/grammar.h b/decoder/grammar.h index add1a235..37c7276d 100644 --- a/decoder/grammar.h +++ b/decoder/grammar.h @@ -61,7 +61,7 @@ struct Grammar {  typedef boost::shared_ptr<Grammar> GrammarPtr; -class TGImpl; +struct TGImpl;  struct TextGrammar : public Grammar {    TextGrammar();    explicit TextGrammar(const std::string& file); diff --git a/decoder/hg_union.cc b/decoder/hg_union.cc index a659b6bc..da9f2624 100644 --- a/decoder/hg_union.cc +++ b/decoder/hg_union.cc @@ -64,9 +64,9 @@ void Union(const Hypergraph& in, Hypergraph* out) {    double n_created = 0;    for (const auto& in_node : in.nodes_) {      HG::Node& out_node = out->nodes_[h2n[in_node.node_hash]]; -    for (const auto oeid : out_node.in_edges_) { +    //for (const auto oeid : out_node.in_edges_) {        // TODO hash currently existing edges for quick check for duplication -    } +    //}      for (const auto ieid : in_node.in_edges_) {        const HG::Edge& in_edge = in.edges_[ieid];        // TODO: replace slow N^2 check with hashing diff --git a/decoder/phrasebased_translator.h b/decoder/phrasebased_translator.h index 10790d0d..85dc0a26 100644 --- a/decoder/phrasebased_translator.h +++ b/decoder/phrasebased_translator.h @@ -3,7 +3,7 @@  #include "translator.h" -class PhraseBasedTranslatorImpl; +struct PhraseBasedTranslatorImpl;  class PhraseBasedTranslator : public Translator {   public:    PhraseBasedTranslator(const boost::program_options::variables_map& conf); diff --git a/decoder/scfg_translator.cc b/decoder/scfg_translator.cc index 538f82ec..9831a3c3 100644 --- a/decoder/scfg_translator.cc +++ b/decoder/scfg_translator.cc @@ -62,7 +62,7 @@ PassThroughGrammar::PassThroughGrammar(const Lattice& input, const string& cat,    for (int i = 0; i < input.size(); ++i) {      const vector<LatticeArc>& alts = input[i];      for (int k = 0; k < alts.size(); ++k) { -      const int j = alts[k].dist2next + i; +      // const int j = alts[k].dist2next + i;        const string& src = TD::Convert(alts[k].label);        if (ss.count(alts[k].label) == 0) {          if (num_pt_features > 0) { diff --git a/decoder/sentence_metadata.h b/decoder/sentence_metadata.h index e13c2ca5..27fcac38 100644 --- a/decoder/sentence_metadata.h +++ b/decoder/sentence_metadata.h @@ -7,8 +7,8 @@  #include "lattice.h"  #include "tree_fragment.h" -struct DocScorer;  // deprecated, will be removed -struct Score;     // deprecated, will be removed +class DocScorer;  // deprecated, will be removed +class Score;     // deprecated, will be removed  namespace cdec {  enum InputType { kSEQUENCE, kTREE, kLATTICE, kFOREST, kUNKNOWN }; @@ -17,7 +17,7 @@ class TreeFragment;  class SentenceMetadata {   public: -  friend class DecoderImpl; +  friend struct DecoderImpl;    SentenceMetadata(int id, const Lattice& ref) :      sent_id_(id),      src_len_(-1), diff --git a/decoder/translator.h b/decoder/translator.h index 096cf191..37070cda 100644 --- a/decoder/translator.h +++ b/decoder/translator.h @@ -54,7 +54,7 @@ class Translator {    State state_;  }; -class SCFGTranslatorImpl; +struct SCFGTranslatorImpl;  class SCFGTranslator : public Translator {   public:    SCFGTranslator(const boost::program_options::variables_map& conf); @@ -72,7 +72,7 @@ class SCFGTranslator : public Translator {    boost::shared_ptr<SCFGTranslatorImpl> pimpl_;  }; -class FSTTranslatorImpl; +struct FSTTranslatorImpl;  class FSTTranslator : public Translator {   public:    FSTTranslator(const boost::program_options::variables_map& conf); @@ -85,7 +85,7 @@ class FSTTranslator : public Translator {    boost::shared_ptr<FSTTranslatorImpl> pimpl_;  }; -class RescoreTranslatorImpl; +struct RescoreTranslatorImpl;  class RescoreTranslator : public Translator {   public:    RescoreTranslator(const boost::program_options::variables_map& conf); @@ -98,7 +98,7 @@ class RescoreTranslator : public Translator {    boost::shared_ptr<RescoreTranslatorImpl> pimpl_;  }; -class Tree2StringTranslatorImpl; +struct Tree2StringTranslatorImpl;  class Tree2StringTranslator : public Translator {   public:    Tree2StringTranslator(const boost::program_options::variables_map& conf, diff --git a/decoder/tree_fragment.cc b/decoder/tree_fragment.cc index 5f717c5b..ff406adf 100644 --- a/decoder/tree_fragment.cc +++ b/decoder/tree_fragment.cc @@ -79,7 +79,7 @@ void TreeFragment::ParseRec(const StringPiece& tree, bool afs, unsigned cp, unsi      cerr << "Expected ( at " << cp << endl;      abort();    } -  const unsigned i = symp; +  // const unsigned i = symp;    vector<unsigned> rhs; // w | 0 = terminal, w | NT_BIT, index | FRONTIER_BIT    ++cp;    while(tree[cp] == ' ') { ++cp; } @@ -119,7 +119,7 @@ void TreeFragment::ParseRec(const StringPiece& tree, bool afs, unsigned cp, unsi        }       }    } // continuent has completed, cp is at ), build node -  const unsigned j = symp; // span from (i,j) +  // const unsigned j = symp; // span from (i,j)    // add an internal non-terminal symbol    const unsigned nt = TD::Convert(tree.substr(nt_start, nt_end - nt_start).as_string()) | RHS_BIT;    nodes[np] = TreeFragmentProduction(nt, rhs); diff --git a/decoder/trule.h b/decoder/trule.h index 7af46747..dda85cef 100644 --- a/decoder/trule.h +++ b/decoder/trule.h @@ -16,7 +16,7 @@  class TRule;  typedef boost::shared_ptr<TRule> TRulePtr; -namespace cdec { struct TreeFragment; } +namespace cdec { class TreeFragment; }  struct AlignmentPoint {    AlignmentPoint() : s_(), t_() {} diff --git a/example_extff/CMakeLists.txt b/example_extff/CMakeLists.txt new file mode 100644 index 00000000..5170a0b2 --- /dev/null +++ b/example_extff/CMakeLists.txt @@ -0,0 +1,10 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../mteval) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../klm) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../decoder) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/..) + +set(ff_example_LIB_SRCS ff_example.cc) +add_library(ff_example SHARED ${ff_example_LIB_SRCS}) +target_link_libraries(ff_example libcdec utils) +set_target_properties(ff_example PROPERTIES VERSION 1.0.0 SOVERSION 1) diff --git a/example_extff/Makefile.am b/example_extff/Makefile.am deleted file mode 100644 index 6abfe6c5..00000000 --- a/example_extff/Makefile.am +++ /dev/null @@ -1,5 +0,0 @@ -AM_CPPFLAGS = -DBOOST_TEST_DYN_LINK -W -Wall -Wno-sign-compare -I$(top_srcdir) -I$(top_srcdir)/mteval -I$(top_srcdir)/utils -I$(top_srcdir)/klm -I$(top_srcdir)/decoder - -lib_LTLIBRARIES = libff_example.la -libff_example_la_SOURCES = ff_example.cc -libff_example_la_LDFLAGS = -version-info 1:0:0 -module diff --git a/extractor/CMakeLists.txt b/extractor/CMakeLists.txt new file mode 100644 index 00000000..d37c6b95 --- /dev/null +++ b/extractor/CMakeLists.txt @@ -0,0 +1,132 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/features) + +find_package(GTest) +find_package(GMock) +if(GMOCK_FOUND) +  set(TEST_SRCS alignment_test.cc +    data_array_test.cc +    fast_intersector_test.cc +    grammar_extractor_test.cc +    matchings_finder_test.cc +    matchings_sampler_test.cc +    phrase_location_sampler_test.cc +    phrase_test.cc +    precomputation_test.cc +    rule_extractor_helper_test.cc +    rule_extractor_test.cc +    rule_factory_test.cc +    scorer2_test.cc +    suffix_array_sampler_test.cc +    suffix_array_test.cc +    target_phrase_extractor_test.cc +    translation_table_test.cc +    vocabulary_test.cc) +  INCLUDE_DIRECTORIES(${GTEST_INCLUDE_DIRS}) +  INCLUDE_DIRECTORIES(${GMOCK_INCLUDE_DIRS}) +  foreach(testSrc ${TEST_SRCS}) +    #Extract the filename without an extension (NAME_WE) +    get_filename_component(testName ${testSrc} NAME_WE) + +    #Add compile target +    add_executable(${testName} ${testSrc}) + +    #link to Boost libraries AND your targets and dependencies +    target_link_libraries(${testName} extractor ${GMOCK_BOTH_LIBRARIES} ${GTEST_BOTH_LIBRARIES} ${Boost_LIBRARIES} ${ZLIB_LIBRARIES}) + +    #I like to move testing binaries into a testBin directory +    set_target_properties(${testName} PROPERTIES  +      RUNTIME_OUTPUT_DIRECTORY  ${CMAKE_CURRENT_SOURCE_DIR}) + +    #Finally add it to test execution -  +    #Notice the WORKING_DIRECTORY and COMMAND +    add_test(NAME ${testName} COMMAND ${CMAKE_CURRENT_SOURCE_DIR}/${testName}  +       WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}) +  endforeach(testSrc) +endif(GMOCK_FOUND) + +set(sacompile_SRCS sacompile.cc) +add_executable(sacompile ${sacompile_SRCS}) +target_link_libraries(sacompile extractor ${Boost_LIBRARIES} z) + +set(run_extractor_SRCS run_extractor.cc) +add_executable(run_extractor ${run_extractor_SRCS}) +target_link_libraries(run_extractor extractor ${Boost_LIBRARIES} z) + + +set(extract_SRCS extract.cc) +add_executable(extract ${extract_SRCS}) +target_link_libraries(extract extractor ${Boost_LIBRARIES} z) + + +set(extractor_STAT_SRCS +    alignment.cc +    backoff_sampler.cc +    data_array.cc +    fast_intersector.cc +    features/count_source_target.cc +    features/feature.cc +    features/is_source_singleton.cc +    features/is_source_target_singleton.cc +    features/max_lex_source_given_target.cc +    features/max_lex_target_given_source.cc +    features/sample_source_count.cc +    features/target_given_source_coherent.cc +    features/count_source_target.h +    features/feature.h +    features/is_source_singleton.h +    features/is_source_target_singleton.h +    features/max_lex_source_given_target.h +    features/max_lex_target_given_source.h +    features/sample_source_count.h +    features/target_given_source_coherent.h +    grammar.cc +    grammar_extractor.cc +    matchings_finder.cc +    matchings_sampler.cc +    matchings_trie.cc +    phrase.cc +    phrase_builder.cc +    phrase_location.cc +    phrase_location_sampler.cc +    precomputation.cc +    rule.cc +    rule_extractor.cc +    rule_extractor_helper.cc +    rule_factory.cc +    scorer.cc +    suffix_array.cc +    suffix_array_sampler.cc +    target_phrase_extractor.cc +    time_util.cc +    translation_table.cc +    vocabulary.cc +    alignment.h +    backoff_sampler.h +    data_array.h +    fast_intersector.h +    grammar.h +    grammar_extractor.h +    matchings_finder.h +    matchings_sampler.h +    matchings_trie.h +    phrase.h +    phrase_builder.h +    phrase_location.h +    phrase_location_sampler.h +    precomputation.h +    rule.h +    rule_extractor.h +    rule_extractor_helper.h +    rule_factory.h +    sampler.h +    scorer.h +    suffix_array.h +    suffix_array_sampler.h +    target_phrase_extractor.h +    time_util.h +    translation_table.h +    vocabulary.h) + +add_library(extractor STATIC ${extractor_STAT_SRCS}) + diff --git a/extractor/Makefile.am b/extractor/Makefile.am deleted file mode 100644 index a406d9dc..00000000 --- a/extractor/Makefile.am +++ /dev/null @@ -1,192 +0,0 @@ - -bin_PROGRAMS = sacompile run_extractor extract - -EXTRA_PROGRAMS = alignment_test \ -    data_array_test \ -    fast_intersector_test \ -    feature_count_source_target_test \ -    feature_is_source_singleton_test \ -    feature_is_source_target_singleton_test \ -    feature_max_lex_source_given_target_test \ -    feature_max_lex_target_given_source_test \ -    feature_sample_source_count_test \ -    feature_target_given_source_coherent_test \ -    grammar_extractor_test \ -    matchings_finder_test \ -    matchings_sampler_test \ -    phrase_location_sampler_test \ -    phrase_test \ -    precomputation_test \ -    rule_extractor_helper_test \ -    rule_extractor_test \ -    rule_factory_test \ -    scorer_test \ -    suffix_array_sampler_test \ -    suffix_array_test \ -    target_phrase_extractor_test \ -    translation_table_test \ -    vocabulary_test - -if HAVE_GTEST -  RUNNABLE_TESTS = alignment_test \ -    data_array_test \ -    fast_intersector_test \ -    feature_count_source_target_test \ -    feature_is_source_singleton_test \ -    feature_is_source_target_singleton_test \ -    feature_max_lex_source_given_target_test \ -    feature_max_lex_target_given_source_test \ -    feature_sample_source_count_test \ -    feature_target_given_source_coherent_test \ -    grammar_extractor_test \ -    matchings_finder_test \ -    matchings_sampler_test \ -    phrase_location_sampler_test \ -    phrase_test \ -    precomputation_test \ -    rule_extractor_helper_test \ -    rule_extractor_test \ -    rule_factory_test \ -    scorer_test \ -    suffix_array_sampler_test \ -    suffix_array_test \ -    target_phrase_extractor_test \ -    translation_table_test \ -    vocabulary_test -endif - -noinst_PROGRAMS = $(RUNNABLE_TESTS) - -TESTS = $(RUNNABLE_TESTS) - -alignment_test_SOURCES = alignment_test.cc -alignment_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) libextractor.a -data_array_test_SOURCES = data_array_test.cc -data_array_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) libextractor.a -fast_intersector_test_SOURCES = fast_intersector_test.cc -fast_intersector_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -feature_count_source_target_test_SOURCES = features/count_source_target_test.cc -feature_count_source_target_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) libextractor.a -feature_is_source_singleton_test_SOURCES = features/is_source_singleton_test.cc -feature_is_source_singleton_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) libextractor.a -feature_is_source_target_singleton_test_SOURCES = features/is_source_target_singleton_test.cc -feature_is_source_target_singleton_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) libextractor.a -feature_max_lex_source_given_target_test_SOURCES = features/max_lex_source_given_target_test.cc -feature_max_lex_source_given_target_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -feature_max_lex_target_given_source_test_SOURCES = features/max_lex_target_given_source_test.cc -feature_max_lex_target_given_source_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -feature_sample_source_count_test_SOURCES = features/sample_source_count_test.cc -feature_sample_source_count_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) libextractor.a -feature_target_given_source_coherent_test_SOURCES = features/target_given_source_coherent_test.cc -feature_target_given_source_coherent_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) libextractor.a -grammar_extractor_test_SOURCES = grammar_extractor_test.cc -grammar_extractor_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -matchings_finder_test_SOURCES = matchings_finder_test.cc -matchings_finder_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -matchings_sampler_test_SOURCES = matchings_sampler_test.cc -matchings_sampler_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -phrase_location_sampler_test_SOURCES = phrase_location_sampler_test.cc -phrase_location_sampler_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -phrase_test_SOURCES = phrase_test.cc -phrase_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -precomputation_test_SOURCES = precomputation_test.cc -precomputation_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -rule_extractor_helper_test_SOURCES = rule_extractor_helper_test.cc -rule_extractor_helper_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -rule_extractor_test_SOURCES = rule_extractor_test.cc -rule_extractor_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -rule_factory_test_SOURCES = rule_factory_test.cc -rule_factory_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -scorer_test_SOURCES = scorer_test.cc -scorer_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -suffix_array_sampler_test_SOURCES = suffix_array_sampler_test.cc -suffix_array_sampler_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -suffix_array_test_SOURCES = suffix_array_test.cc -suffix_array_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -target_phrase_extractor_test_SOURCES = target_phrase_extractor_test.cc -target_phrase_extractor_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -translation_table_test_SOURCES = translation_table_test.cc -translation_table_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) $(GMOCK_LDFLAGS) $(GMOCK_LIBS) libextractor.a -vocabulary_test_SOURCES = vocabulary_test.cc -vocabulary_test_LDADD = $(GTEST_LDFLAGS) $(GTEST_LIBS) libextractor.a - -noinst_LIBRARIES = libextractor.a - -sacompile_SOURCES = sacompile.cc -sacompile_LDADD = libextractor.a -run_extractor_SOURCES = run_extractor.cc -run_extractor_LDADD = libextractor.a -extract_SOURCES = extract.cc -extract_LDADD = libextractor.a - -libextractor_a_SOURCES = \ -  alignment.cc \ -  backoff_sampler.cc \ -  data_array.cc \ -  fast_intersector.cc \ -  features/count_source_target.cc \ -  features/feature.cc \ -  features/is_source_singleton.cc \ -  features/is_source_target_singleton.cc \ -  features/max_lex_source_given_target.cc \ -  features/max_lex_target_given_source.cc \ -  features/sample_source_count.cc \ -  features/target_given_source_coherent.cc \ -  features/count_source_target.h \ -  features/feature.h \ -  features/is_source_singleton.h \ -  features/is_source_target_singleton.h \ -  features/max_lex_source_given_target.h \ -  features/max_lex_target_given_source.h \ -  features/sample_source_count.h \ -  features/target_given_source_coherent.h \ -  grammar.cc \ -  grammar_extractor.cc \ -  matchings_finder.cc \ -  matchings_sampler.cc \ -  matchings_trie.cc \ -  phrase.cc \ -  phrase_builder.cc \ -  phrase_location.cc \ -  phrase_location_sampler.cc \ -  precomputation.cc \ -  rule.cc \ -  rule_extractor.cc \ -  rule_extractor_helper.cc \ -  rule_factory.cc \ -  scorer.cc \ -  suffix_array.cc \ -  suffix_array_sampler.cc \ -  target_phrase_extractor.cc \ -  time_util.cc \ -  translation_table.cc \ -  vocabulary.cc \ -  alignment.h \ -  backoff_sampler.h \ -  data_array.h \ -  fast_intersector.h \ -  grammar.h \ -  grammar_extractor.h \ -  matchings_finder.h \ -  matchings_sampler.h \ -  matchings_trie.h \ -  phrase.h \ -  phrase_builder.h \ -  phrase_location.h \ -  phrase_location_sampler.h \ -  precomputation.h \ -  rule.h \ -  rule_extractor.h \ -  rule_extractor_helper.h \ -  rule_factory.h \ -  sampler.h \ -  scorer.h \ -  suffix_array.h \ -  suffix_array_sampler.h \ -  target_phrase_extractor.h \ -  time_util.h \ -  translation_table.h \ -  vocabulary.h - -AM_CPPFLAGS = -W -Wall -Wno-sign-compare $(OPENMP_CXXFLAGS) $(GTEST_CPPFLAGS) $(GMOCK_CPPFLAGS) -AM_LDFLAGS = $(OPENMP_CXXFLAGS) diff --git a/extractor/scorer_test.cc b/extractor/scorer2_test.cc index bf77f7ef..bf77f7ef 100644 --- a/extractor/scorer_test.cc +++ b/extractor/scorer2_test.cc diff --git a/klm/lm/CMakeLists.txt b/klm/lm/CMakeLists.txt new file mode 100644 index 00000000..5814b623 --- /dev/null +++ b/klm/lm/CMakeLists.txt @@ -0,0 +1,129 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/..) + +set(build_binary_SRCS build_binary_main.cc) +add_executable(build_binary ${build_binary_SRCS}) +target_link_libraries(build_binary klm klm_util klm_util_double z) + + +set(ngram_query_SRCS query_main.cc) +add_executable(ngram_query ${ngram_query_SRCS}) +target_link_libraries(ngram_query klm klm_util klm_util_double z) + +set(klm_STAT_SRCS +    bhiksha.hh +    binary_format.hh +    blank.hh +    config.hh +    enumerate_vocab.hh +    facade.hh +    left.hh +    lm_exception.hh +    max_order.hh +    model.hh +    model_type.hh +    ngram_query.hh +    partial.hh +    quantize.hh +    read_arpa.hh +    return.hh +    search_hashed.hh +    search_trie.hh +    sizes.hh +    state.hh +    trie.hh +    trie_sort.hh +    value.hh +    value_build.hh +    virtual_interface.hh +    vocab.hh +    weights.hh +    word_index.hh +    bhiksha.cc +    binary_format.cc +    config.cc +    lm_exception.cc +    quantize.cc +    model.cc +    read_arpa.cc +    search_hashed.cc +    search_trie.cc +    sizes.cc +    trie.cc +    trie_sort.cc +    value_build.cc +    virtual_interface.cc +    vocab.cc) + +add_library(klm STATIC ${klm_STAT_SRCS}) + + +########### install files ############### + + + + +#original Makefile.am contents follow: + +#bin_PROGRAMS = build_binary ngram_query +# +#build_binary_SOURCES = build_binary_main.cc +#build_binary_LDADD = libklm.a ../util/libklm_util.a ../util/double-conversion/libklm_util_double.a -lz +# +#ngram_query_SOURCES = query_main.cc +#ngram_query_LDADD = libklm.a ../util/libklm_util.a ../util/double-conversion/libklm_util_double.a -lz +# +##noinst_PROGRAMS = \ +##  ngram_test +##TESTS = ngram_test +##ngram_test_SOURCES = ngram_test.cc +##ngram_test_LDADD = ../util/libklm_util.a +# +#noinst_LIBRARIES = libklm.a +# +#libklm_a_SOURCES = \ +#  bhiksha.hh \ +#  binary_format.hh \ +#  blank.hh \ +#  config.hh \ +#  enumerate_vocab.hh \ +#  facade.hh \ +#  left.hh \ +#  lm_exception.hh \ +#  max_order.hh \ +#  model.hh \ +#  model_type.hh \ +#  ngram_query.hh \ +#  partial.hh \ +#  quantize.hh \ +#  read_arpa.hh \ +#  return.hh \ +#  search_hashed.hh \ +#  search_trie.hh \ +#  sizes.hh \ +#  state.hh \ +#  trie.hh \ +#  trie_sort.hh \ +#  value.hh \ +#  value_build.hh \ +#  virtual_interface.hh \ +#  vocab.hh \ +#  weights.hh \ +#  word_index.hh \ +#  bhiksha.cc \ +#  binary_format.cc \ +#  config.cc \ +#  lm_exception.cc \ +#	quantize.cc \ +#  model.cc \ +#  read_arpa.cc \ +#  search_hashed.cc \ +#  search_trie.cc \ +#  sizes.cc \ +#  trie.cc \ +#	trie_sort.cc \ +#	value_build.cc \ +#  virtual_interface.cc \ +#  vocab.cc +# +#AM_CPPFLAGS = -W -Wall -Wno-sign-compare -I$(top_srcdir)/klm +# diff --git a/klm/lm/Makefile.am b/klm/lm/Makefile.am deleted file mode 100644 index 48b0ba34..00000000 --- a/klm/lm/Makefile.am +++ /dev/null @@ -1,63 +0,0 @@ -bin_PROGRAMS = build_binary ngram_query - -build_binary_SOURCES = build_binary_main.cc -build_binary_LDADD = libklm.a ../util/libklm_util.a ../util/double-conversion/libklm_util_double.a -lz - -ngram_query_SOURCES = query_main.cc -ngram_query_LDADD = libklm.a ../util/libklm_util.a ../util/double-conversion/libklm_util_double.a -lz - -#noinst_PROGRAMS = \ -#  ngram_test -#TESTS = ngram_test -#ngram_test_SOURCES = ngram_test.cc -#ngram_test_LDADD = ../util/libklm_util.a - -noinst_LIBRARIES = libklm.a - -libklm_a_SOURCES = \ -  bhiksha.hh \ -  binary_format.hh \ -  blank.hh \ -  config.hh \ -  enumerate_vocab.hh \ -  facade.hh \ -  left.hh \ -  lm_exception.hh \ -  max_order.hh \ -  model.hh \ -  model_type.hh \ -  ngram_query.hh \ -  partial.hh \ -  quantize.hh \ -  read_arpa.hh \ -  return.hh \ -  search_hashed.hh \ -  search_trie.hh \ -  sizes.hh \ -  state.hh \ -  trie.hh \ -  trie_sort.hh \ -  value.hh \ -  value_build.hh \ -  virtual_interface.hh \ -  vocab.hh \ -  weights.hh \ -  word_index.hh \ -  bhiksha.cc \ -  binary_format.cc \ -  config.cc \ -  lm_exception.cc \ -	quantize.cc \ -  model.cc \ -  read_arpa.cc \ -  search_hashed.cc \ -  search_trie.cc \ -  sizes.cc \ -  trie.cc \ -	trie_sort.cc \ -	value_build.cc \ -  virtual_interface.cc \ -  vocab.cc - -AM_CPPFLAGS = -W -Wall -Wno-sign-compare -I$(top_srcdir)/klm - diff --git a/klm/lm/builder/CMakeLists.txt b/klm/lm/builder/CMakeLists.txt new file mode 100644 index 00000000..5fb1b2d2 --- /dev/null +++ b/klm/lm/builder/CMakeLists.txt @@ -0,0 +1,31 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../..) + +set(lmplz_SRCS +    lmplz_main.cc +    adjust_counts.cc +    adjust_counts.hh +    corpus_count.cc +    corpus_count.hh +    discount.hh +    hash_gamma.hh +    header_info.hh +    initial_probabilities.cc +    initial_probabilities.hh +    interpolate.cc +    interpolate.hh +    joint_order.hh +    multi_stream.hh +    ngram.hh +    ngram_stream.hh +    pipeline.cc +    pipeline.hh +    print.cc +    print.hh +    sort.hh) + +add_executable(lmplz ${lmplz_SRCS}) +target_link_libraries(lmplz klm klm_util_double klm_util_stream klm_util ${Boost_LIBRARIES}) + +set(dump_counts_SRCS print.cc dump_counts_main.cc) +add_executable(dump_counts ${dump_counts_SRCS}) +target_link_libraries(dump_counts klm klm_util_double klm_util_stream klm_util ${Boost_LIBRARIES}) diff --git a/klm/lm/builder/Makefile.am b/klm/lm/builder/Makefile.am deleted file mode 100644 index bb15ff04..00000000 --- a/klm/lm/builder/Makefile.am +++ /dev/null @@ -1,34 +0,0 @@ -bin_PROGRAMS = lmplz dump_counts - -dump_counts_SOURCES = \ -  print.cc \ -  dump_counts_main.cc - -lmplz_SOURCES = \ -  lmplz_main.cc \ -  adjust_counts.cc \ -  adjust_counts.hh \ -  corpus_count.cc \ -  corpus_count.hh \ -  discount.hh \ -  hash_gamma.hh \ -  header_info.hh \ -  initial_probabilities.cc \ -  initial_probabilities.hh \ -  interpolate.cc \ -  interpolate.hh \ -  joint_order.hh \ -  multi_stream.hh \ -  ngram.hh \ -  ngram_stream.hh \ -  pipeline.cc \ -  pipeline.hh \ -  print.cc \ -  print.hh \ -  sort.hh - -dump_counts_LDADD = ../libklm.a ../../util/double-conversion/libklm_util_double.a ../../util/stream/libklm_util_stream.a ../../util/libklm_util.a $(BOOST_THREAD_LIBS) -lmplz_LDADD = ../libklm.a ../../util/double-conversion/libklm_util_double.a ../../util/stream/libklm_util_stream.a ../../util/libklm_util.a $(BOOST_THREAD_LIBS) - -AM_CPPFLAGS = -W -Wall -I$(top_srcdir)/klm - diff --git a/klm/search/CMakeLists.txt b/klm/search/CMakeLists.txt new file mode 100644 index 00000000..af352499 --- /dev/null +++ b/klm/search/CMakeLists.txt @@ -0,0 +1,22 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/..) + +set(ksearch_STAT_SRCS +    applied.hh +    config.hh +    context.hh +    dedupe.hh +    edge.hh +    edge_generator.cc +    edge_generator.hh +    header.hh +    nbest.cc +    nbest.hh +    rule.cc +    rule.hh +    types.hh +    vertex.cc +    vertex.hh +    vertex_generator.hh) + +add_library(ksearch STATIC ${ksearch_STAT_SRCS}) + diff --git a/klm/search/Makefile.am b/klm/search/Makefile.am deleted file mode 100644 index b7f01c24..00000000 --- a/klm/search/Makefile.am +++ /dev/null @@ -1,22 +0,0 @@ -noinst_LIBRARIES = libksearch.a - -libksearch_a_SOURCES = \ -  applied.hh \ -  config.hh \ -  context.hh \ -  dedupe.hh \ -  edge.hh \ -  edge_generator.cc \ -  edge_generator.hh \ -  header.hh \ -  nbest.cc \ -  nbest.hh \ -  rule.cc \ -  rule.hh \ -  types.hh \ -  vertex.cc \ -  vertex.hh \ -  vertex_generator.hh - -AM_CPPFLAGS = -W -Wall -Wno-sign-compare -I.. - diff --git a/klm/util/CMakeLists.txt b/klm/util/CMakeLists.txt new file mode 100644 index 00000000..bef1db78 --- /dev/null +++ b/klm/util/CMakeLists.txt @@ -0,0 +1,53 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/..) + +set(cat_compressed_SRCS cat_compressed_main.cc) + +add_executable(cat_compressed ${cat_compressed_SRCS}) +target_link_libraries(cat_compressed klm_util) + +set(klm_util_STAT_SRCS +    bit_packing.cc +    bit_packing.hh +    ersatz_progress.cc +    ersatz_progress.hh +    exception.cc +    exception.hh +    fake_ofstream.hh +    file.cc +    file.hh +    file_piece.cc +    file_piece.hh +    fixed_array.hh +    getopt.c +    getopt.hh +    have.hh +    joint_sort.hh +    mmap.cc +    mmap.hh +    multi_intersection.hh +    murmur_hash.cc +    murmur_hash.hh +    parallel_read.cc +    parallel_read.hh +    pcqueue.hh +    pool.cc +    pool.hh +    probing_hash_table.hh +    proxy_iterator.hh +    read_compressed.cc +    read_compressed.hh +    scoped.cc +    scoped.hh +    sized_iterator.hh +    sorted_uniform.hh +    string_piece.cc +    string_piece.hh +    string_piece_hash.hh +    thread_pool.hh +    tokenize_piece.hh +    unistd.hh +    usage.cc +    usage.hh) + +add_library(klm_util STATIC ${klm_util_STAT_SRCS}) + diff --git a/klm/util/Makefile.am b/klm/util/Makefile.am deleted file mode 100644 index 5db6e340..00000000 --- a/klm/util/Makefile.am +++ /dev/null @@ -1,66 +0,0 @@ - -noinst_PROGRAMS = cat_compressed - -cat_compressed_SOURCES = cat_compressed_main.cc -cat_compressed_LDADD = libklm_util.a - -#TESTS = \ -#  file_piece_test \ -#  joint_sort_test \ -#  key_value_packing_test \ -#  probing_hash_table_test \ -#  sorted_uniform_test -#  file_piece_test \ -#  joint_sort_test \ -#  key_value_packing_test \ -#  probing_hash_table_test \ -#  sorted_uniform_test - -noinst_LIBRARIES = libklm_util.a - -libklm_util_a_SOURCES = \ -  bit_packing.cc \ -  bit_packing.hh \ -  ersatz_progress.cc \ -  ersatz_progress.hh \ -  exception.cc \ -  exception.hh \ -  fake_ofstream.hh \ -  file.cc \ -  file.hh \ -  file_piece.cc \ -  file_piece.hh \ -  fixed_array.hh \ -  getopt.c \ -  getopt.hh \ -  have.hh \ -  joint_sort.hh \ -  mmap.cc \ -  mmap.hh \ -  multi_intersection.hh \ -  murmur_hash.cc \ -  murmur_hash.hh \ -  parallel_read.cc \ -  parallel_read.hh \ -  pcqueue.hh \ -  pool.cc \ -  pool.hh \ -  probing_hash_table.hh \ -  proxy_iterator.hh \ -  read_compressed.cc \ -  read_compressed.hh \ -  scoped.cc \ -  scoped.hh \ -  sized_iterator.hh \ -  sorted_uniform.hh \ -  string_piece.cc \ -  string_piece.hh \ -  string_piece_hash.hh \ -  thread_pool.hh \ -  tokenize_piece.hh \ -  unistd.hh \ -  usage.cc \ -  usage.hh - -AM_CPPFLAGS = -W -Wall -I$(top_srcdir)/klm -I$(top_srcdir)/klm/util/double-conversion - diff --git a/klm/util/double-conversion/CMakeLists.txt b/klm/util/double-conversion/CMakeLists.txt new file mode 100644 index 00000000..df4162dc --- /dev/null +++ b/klm/util/double-conversion/CMakeLists.txt @@ -0,0 +1,24 @@ +  + +set(klm_util_double_STAT_SRCS +    bignum-dtoa.h +    bignum.h +    cached-powers.h +    diy-fp.h +    double-conversion.h +    fast-dtoa.h +    fixed-dtoa.h +    ieee.h +    strtod.h +    utils.h +    bignum.cc +    bignum-dtoa.cc +    cached-powers.cc +    diy-fp.cc +    double-conversion.cc +    fast-dtoa.cc +    fixed-dtoa.cc +    strtod.cc) + +add_library(klm_util_double STATIC ${klm_util_double_STAT_SRCS}) + diff --git a/klm/util/double-conversion/Makefile.am b/klm/util/double-conversion/Makefile.am deleted file mode 100644 index dfcfb009..00000000 --- a/klm/util/double-conversion/Makefile.am +++ /dev/null @@ -1,23 +0,0 @@ -noinst_LIBRARIES = libklm_util_double.a - -libklm_util_double_a_SOURCES = \ -  bignum-dtoa.h \ -  bignum.h \ -  cached-powers.h \ -  diy-fp.h \ -  double-conversion.h \ -  fast-dtoa.h \ -  fixed-dtoa.h \ -  ieee.h \ -  strtod.h \ -  utils.h \ -  bignum.cc \ -  bignum-dtoa.cc \ -  cached-powers.cc \ -  diy-fp.cc \ -  double-conversion.cc \ -  fast-dtoa.cc \ -  fixed-dtoa.cc \ -  strtod.cc - -AM_CPPFLAGS = -W -Wall -I$(top_srcdir)/klm -I$(top_srcdir)/klm/util/double-conversion diff --git a/klm/util/stream/CMakeLists.txt b/klm/util/stream/CMakeLists.txt new file mode 100644 index 00000000..3ca25f17 --- /dev/null +++ b/klm/util/stream/CMakeLists.txt @@ -0,0 +1,20 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../..) + +set(klm_util_stream_STAT_SRCS +    block.hh +    chain.cc +    chain.hh +    config.hh +    io.cc +    io.hh +    line_input.cc +    line_input.hh +    multi_progress.cc +    multi_progress.hh +    multi_stream.hh +    sort.hh +    stream.hh +    timer.hh) + +add_library(klm_util_stream STATIC ${klm_util_stream_STAT_SRCS}) + diff --git a/klm/util/stream/Makefile.am b/klm/util/stream/Makefile.am deleted file mode 100644 index 25817b50..00000000 --- a/klm/util/stream/Makefile.am +++ /dev/null @@ -1,21 +0,0 @@ -noinst_LIBRARIES = libklm_util_stream.a - -libklm_util_stream_a_SOURCES = \ -  block.hh \ -  chain.cc \ -  chain.hh \ -  config.hh \ -  io.cc \ -  io.hh \ -  line_input.cc \ -  line_input.hh \ -  multi_progress.cc \ -  multi_progress.hh \ -  multi_stream.hh \ -  sort.hh \ -  stream.hh \ -  timer.hh - -AM_CPPFLAGS = -W -Wall -I$(top_srcdir)/klm - -#-I$(top_srcdir)/klm/util/double-conversion diff --git a/m4/acx_pthread.m4 b/m4/acx_pthread.m4 deleted file mode 100644 index 2cf20de1..00000000 --- a/m4/acx_pthread.m4 +++ /dev/null @@ -1,363 +0,0 @@ -# This was retrieved from -#    http://svn.0pointer.de/viewvc/trunk/common/acx_pthread.m4?revision=1277&root=avahi -# See also (perhaps for new versions?) -#    http://svn.0pointer.de/viewvc/trunk/common/acx_pthread.m4?root=avahi -# -# We've rewritten the inconsistency check code (from avahi), to work -# more broadly.  In particular, it no longer assumes ld accepts -zdefs. -# This caused a restructing of the code, but the functionality has only -# changed a little. - -dnl @synopsis ACX_PTHREAD([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]]) -dnl -dnl @summary figure out how to build C programs using POSIX threads -dnl -dnl This macro figures out how to build C programs using POSIX threads. -dnl It sets the PTHREAD_LIBS output variable to the threads library and -dnl linker flags, and the PTHREAD_CFLAGS output variable to any special -dnl C compiler flags that are needed. (The user can also force certain -dnl compiler flags/libs to be tested by setting these environment -dnl variables.) -dnl -dnl Also sets PTHREAD_CC to any special C compiler that is needed for -dnl multi-threaded programs (defaults to the value of CC otherwise). -dnl (This is necessary on AIX to use the special cc_r compiler alias.) -dnl -dnl NOTE: You are assumed to not only compile your program with these -dnl flags, but also link it with them as well. e.g. you should link -dnl with $PTHREAD_CC $CFLAGS $PTHREAD_CFLAGS $LDFLAGS ... $PTHREAD_LIBS -dnl $LIBS -dnl -dnl If you are only building threads programs, you may wish to use -dnl these variables in your default LIBS, CFLAGS, and CC: -dnl -dnl        LIBS="$PTHREAD_LIBS $LIBS" -dnl        CFLAGS="$CFLAGS $PTHREAD_CFLAGS" -dnl        CC="$PTHREAD_CC" -dnl -dnl In addition, if the PTHREAD_CREATE_JOINABLE thread-attribute -dnl constant has a nonstandard name, defines PTHREAD_CREATE_JOINABLE to -dnl that name (e.g. PTHREAD_CREATE_UNDETACHED on AIX). -dnl -dnl ACTION-IF-FOUND is a list of shell commands to run if a threads -dnl library is found, and ACTION-IF-NOT-FOUND is a list of commands to -dnl run it if it is not found. If ACTION-IF-FOUND is not specified, the -dnl default action will define HAVE_PTHREAD. -dnl -dnl Please let the authors know if this macro fails on any platform, or -dnl if you have any other suggestions or comments. This macro was based -dnl on work by SGJ on autoconf scripts for FFTW (www.fftw.org) (with -dnl help from M. Frigo), as well as ac_pthread and hb_pthread macros -dnl posted by Alejandro Forero Cuervo to the autoconf macro repository. -dnl We are also grateful for the helpful feedback of numerous users. -dnl -dnl @category InstalledPackages -dnl @author Steven G. Johnson <stevenj@alum.mit.edu> -dnl @version 2006-05-29 -dnl @license GPLWithACException -dnl  -dnl Checks for GCC shared/pthread inconsistency based on work by -dnl Marcin Owsiany <marcin@owsiany.pl> - - -AC_DEFUN([ACX_PTHREAD], [ -AC_REQUIRE([AC_CANONICAL_HOST]) -AC_LANG_SAVE -AC_LANG_C -acx_pthread_ok=no - -# We used to check for pthread.h first, but this fails if pthread.h -# requires special compiler flags (e.g. on True64 or Sequent). -# It gets checked for in the link test anyway. - -# First of all, check if the user has set any of the PTHREAD_LIBS, -# etcetera environment variables, and if threads linking works using -# them: -if test x"$PTHREAD_LIBS$PTHREAD_CFLAGS" != x; then -        save_CFLAGS="$CFLAGS" -        CFLAGS="$CFLAGS $PTHREAD_CFLAGS" -        save_LIBS="$LIBS" -        LIBS="$PTHREAD_LIBS $LIBS" -        AC_MSG_CHECKING([for pthread_join in LIBS=$PTHREAD_LIBS with CFLAGS=$PTHREAD_CFLAGS]) -        AC_TRY_LINK_FUNC(pthread_join, acx_pthread_ok=yes) -        AC_MSG_RESULT($acx_pthread_ok) -        if test x"$acx_pthread_ok" = xno; then -                PTHREAD_LIBS="" -                PTHREAD_CFLAGS="" -        fi -        LIBS="$save_LIBS" -        CFLAGS="$save_CFLAGS" -fi - -# We must check for the threads library under a number of different -# names; the ordering is very important because some systems -# (e.g. DEC) have both -lpthread and -lpthreads, where one of the -# libraries is broken (non-POSIX). - -# Create a list of thread flags to try.  Items starting with a "-" are -# C compiler flags, and other items are library names, except for "none" -# which indicates that we try without any flags at all, and "pthread-config" -# which is a program returning the flags for the Pth emulation library. - -acx_pthread_flags="pthreads none -Kthread -kthread lthread -pthread -pthreads -mthreads pthread --thread-safe -mt pthread-config" - -# The ordering *is* (sometimes) important.  Some notes on the -# individual items follow: - -# pthreads: AIX (must check this before -lpthread) -# none: in case threads are in libc; should be tried before -Kthread and -#       other compiler flags to prevent continual compiler warnings -# -Kthread: Sequent (threads in libc, but -Kthread needed for pthread.h) -# -kthread: FreeBSD kernel threads (preferred to -pthread since SMP-able) -# lthread: LinuxThreads port on FreeBSD (also preferred to -pthread) -# -pthread: Linux/gcc (kernel threads), BSD/gcc (userland threads) -# -pthreads: Solaris/gcc -# -mthreads: Mingw32/gcc, Lynx/gcc -# -mt: Sun Workshop C (may only link SunOS threads [-lthread], but it -#      doesn't hurt to check since this sometimes defines pthreads too; -#      also defines -D_REENTRANT) -#      ... -mt is also the pthreads flag for HP/aCC -# pthread: Linux, etcetera -# --thread-safe: KAI C++ -# pthread-config: use pthread-config program (for GNU Pth library) - -case "${host_cpu}-${host_os}" in -        *solaris*) - -        # On Solaris (at least, for some versions), libc contains stubbed -        # (non-functional) versions of the pthreads routines, so link-based -        # tests will erroneously succeed.  (We need to link with -pthreads/-mt/ -        # -lpthread.)  (The stubs are missing pthread_cleanup_push, or rather -        # a function called by this macro, so we could check for that, but -        # who knows whether they'll stub that too in a future libc.)  So, -        # we'll just look for -pthreads and -lpthread first: - -        acx_pthread_flags="-pthreads pthread -mt -pthread $acx_pthread_flags" -        ;; -esac - -if test x"$acx_pthread_ok" = xno; then -for flag in $acx_pthread_flags; do - -        case $flag in -                none) -                AC_MSG_CHECKING([whether pthreads work without any flags]) -                ;; - -                -*) -                AC_MSG_CHECKING([whether pthreads work with $flag]) -                PTHREAD_CFLAGS="$flag" -                ;; - -		pthread-config) -		AC_CHECK_PROG(acx_pthread_config, pthread-config, yes, no) -		if test x"$acx_pthread_config" = xno; then continue; fi -		PTHREAD_CFLAGS="`pthread-config --cflags`" -		PTHREAD_LIBS="`pthread-config --ldflags` `pthread-config --libs`" -		;; - -                *) -                AC_MSG_CHECKING([for the pthreads library -l$flag]) -                PTHREAD_LIBS="-l$flag" -                ;; -        esac - -        save_LIBS="$LIBS" -        save_CFLAGS="$CFLAGS" -        LIBS="$PTHREAD_LIBS $LIBS" -        CFLAGS="$CFLAGS $PTHREAD_CFLAGS" - -        # Check for various functions.  We must include pthread.h, -        # since some functions may be macros.  (On the Sequent, we -        # need a special flag -Kthread to make this header compile.) -        # We check for pthread_join because it is in -lpthread on IRIX -        # while pthread_create is in libc.  We check for pthread_attr_init -        # due to DEC craziness with -lpthreads.  We check for -        # pthread_cleanup_push because it is one of the few pthread -        # functions on Solaris that doesn't have a non-functional libc stub. -        # We try pthread_create on general principles. -        AC_TRY_LINK([#include <pthread.h>], -                    [pthread_t th; pthread_join(th, 0); -                     pthread_attr_init(0); pthread_cleanup_push(0, 0); -                     pthread_create(0,0,0,0); pthread_cleanup_pop(0); ], -                    [acx_pthread_ok=yes]) - -        LIBS="$save_LIBS" -        CFLAGS="$save_CFLAGS" - -        AC_MSG_RESULT($acx_pthread_ok) -        if test "x$acx_pthread_ok" = xyes; then -                break; -        fi - -        PTHREAD_LIBS="" -        PTHREAD_CFLAGS="" -done -fi - -# Various other checks: -if test "x$acx_pthread_ok" = xyes; then -        save_LIBS="$LIBS" -        LIBS="$PTHREAD_LIBS $LIBS" -        save_CFLAGS="$CFLAGS" -        CFLAGS="$CFLAGS $PTHREAD_CFLAGS" - -        # Detect AIX lossage: JOINABLE attribute is called UNDETACHED. -	AC_MSG_CHECKING([for joinable pthread attribute]) -	attr_name=unknown -	for attr in PTHREAD_CREATE_JOINABLE PTHREAD_CREATE_UNDETACHED; do -	    AC_TRY_LINK([#include <pthread.h>], [int attr=$attr; return attr;], -                        [attr_name=$attr; break]) -	done -        AC_MSG_RESULT($attr_name) -        if test "$attr_name" != PTHREAD_CREATE_JOINABLE; then -            AC_DEFINE_UNQUOTED(PTHREAD_CREATE_JOINABLE, $attr_name, -                               [Define to necessary symbol if this constant -                                uses a non-standard name on your system.]) -        fi - -        AC_MSG_CHECKING([if more special flags are required for pthreads]) -        flag=no -        case "${host_cpu}-${host_os}" in -            *-aix* | *-freebsd* | *-darwin*) flag="-D_THREAD_SAFE";; -            *solaris* | *-osf* | *-hpux*) flag="-D_REENTRANT";; -        esac -        AC_MSG_RESULT(${flag}) -        if test "x$flag" != xno; then -            PTHREAD_CFLAGS="$flag $PTHREAD_CFLAGS" -        fi - -        LIBS="$save_LIBS" -        CFLAGS="$save_CFLAGS" -        # More AIX lossage: must compile with xlc_r or cc_r -	if test x"$GCC" != xyes; then -          AC_CHECK_PROGS(PTHREAD_CC, xlc_r cc_r, ${CC}) -        else -          PTHREAD_CC=$CC -	fi - -	# The next part tries to detect GCC inconsistency with -shared on some -	# architectures and systems. The problem is that in certain -	# configurations, when -shared is specified, GCC "forgets" to -	# internally use various flags which are still necessary. -	 -	# -	# Prepare the flags -	# -	save_CFLAGS="$CFLAGS" -	save_LIBS="$LIBS" -	save_CC="$CC" -	 -	# Try with the flags determined by the earlier checks. -	# -	# -Wl,-z,defs forces link-time symbol resolution, so that the -	# linking checks with -shared actually have any value -	# -	# FIXME: -fPIC is required for -shared on many architectures, -	# so we specify it here, but the right way would probably be to -	# properly detect whether it is actually required. -	CFLAGS="-shared -fPIC -Wl,-z,defs $CFLAGS $PTHREAD_CFLAGS" -	LIBS="$PTHREAD_LIBS $LIBS" -	CC="$PTHREAD_CC" -	 -	# In order not to create several levels of indentation, we test -	# the value of "$done" until we find the cure or run out of ideas. -	done="no" -	 -	# First, make sure the CFLAGS we added are actually accepted by our -	# compiler.  If not (and OS X's ld, for instance, does not accept -z), -	# then we can't do this test. -	if test x"$done" = xno; then -	   AC_MSG_CHECKING([whether to check for GCC pthread/shared inconsistencies]) -	   AC_TRY_LINK(,, , [done=yes]) -	 -	   if test "x$done" = xyes ; then -	      AC_MSG_RESULT([no]) -	   else -	      AC_MSG_RESULT([yes]) -	   fi -	fi -	 -	if test x"$done" = xno; then -	   AC_MSG_CHECKING([whether -pthread is sufficient with -shared]) -	   AC_TRY_LINK([#include <pthread.h>], -	      [pthread_t th; pthread_join(th, 0); -	      pthread_attr_init(0); pthread_cleanup_push(0, 0); -	      pthread_create(0,0,0,0); pthread_cleanup_pop(0); ], -	      [done=yes]) -	    -	   if test "x$done" = xyes; then -	      AC_MSG_RESULT([yes]) -	   else -	      AC_MSG_RESULT([no]) -	   fi -	fi -	 -	# -	# Linux gcc on some architectures such as mips/mipsel forgets -	# about -lpthread -	# -	if test x"$done" = xno; then -	   AC_MSG_CHECKING([whether -lpthread fixes that]) -	   LIBS="-lpthread $PTHREAD_LIBS $save_LIBS" -	   AC_TRY_LINK([#include <pthread.h>], -	      [pthread_t th; pthread_join(th, 0); -	      pthread_attr_init(0); pthread_cleanup_push(0, 0); -	      pthread_create(0,0,0,0); pthread_cleanup_pop(0); ], -	      [done=yes]) -	 -	   if test "x$done" = xyes; then -	      AC_MSG_RESULT([yes]) -	      PTHREAD_LIBS="-lpthread $PTHREAD_LIBS" -	   else -	      AC_MSG_RESULT([no]) -	   fi -	fi -	# -	# FreeBSD 4.10 gcc forgets to use -lc_r instead of -lc -	# -	if test x"$done" = xno; then -	   AC_MSG_CHECKING([whether -lc_r fixes that]) -	   LIBS="-lc_r $PTHREAD_LIBS $save_LIBS" -	   AC_TRY_LINK([#include <pthread.h>], -	       [pthread_t th; pthread_join(th, 0); -	        pthread_attr_init(0); pthread_cleanup_push(0, 0); -	        pthread_create(0,0,0,0); pthread_cleanup_pop(0); ], -	       [done=yes]) -	 -	   if test "x$done" = xyes; then -	      AC_MSG_RESULT([yes]) -	      PTHREAD_LIBS="-lc_r $PTHREAD_LIBS" -	   else -	      AC_MSG_RESULT([no]) -	   fi -	fi -	if test x"$done" = xno; then -	   # OK, we have run out of ideas -	   AC_MSG_WARN([Impossible to determine how to use pthreads with shared libraries]) -	 -	   # so it's not safe to assume that we may use pthreads -	   acx_pthread_ok=no -	fi -	 -	CFLAGS="$save_CFLAGS" -	LIBS="$save_LIBS" -	CC="$save_CC" -else -        PTHREAD_CC="$CC" -fi - -AC_SUBST(PTHREAD_LIBS) -AC_SUBST(PTHREAD_CFLAGS) -AC_SUBST(PTHREAD_CC) - -# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND: -if test x"$acx_pthread_ok" = xyes; then -        ifelse([$1],,AC_DEFINE(HAVE_PTHREAD,1,[Define if you have POSIX threads libraries and header files.]),[$1]) -        : -else -        acx_pthread_ok=no -        $2 -fi -AC_LANG_RESTORE -])dnl ACX_PTHREAD diff --git a/m4/ax_cxx_compile_stdcxx_11.m4 b/m4/ax_cxx_compile_stdcxx_11.m4 deleted file mode 100644 index f6cf4a15..00000000 --- a/m4/ax_cxx_compile_stdcxx_11.m4 +++ /dev/null @@ -1,140 +0,0 @@ -# ============================================================================ -#  http://www.gnu.org/software/autoconf-archive/ax_cxx_compile_stdcxx_11.html -# ============================================================================ -# -# SYNOPSIS -# -#   AX_CXX_COMPILE_STDCXX_11([ext|noext],[mandatory|optional]) -# -# DESCRIPTION -# -#   Check for baseline language coverage in the compiler for the C++11 -#   standard; if necessary, add switches to CXXFLAGS to enable support. -# -#   The first argument, if specified, indicates whether you insist on an -#   extended mode (e.g. -std=gnu++11) or a strict conformance mode (e.g. -#   -std=c++11).  If neither is specified, you get whatever works, with -#   preference for an extended mode. -# -#   The second argument, if specified 'mandatory' or if left unspecified, -#   indicates that baseline C++11 support is required and that the macro -#   should error out if no mode with that support is found.  If specified -#   'optional', then configuration proceeds regardless, after defining -#   HAVE_CXX11 if and only if a supporting mode is found. -# -# LICENSE -# -#   Copyright (c) 2008 Benjamin Kosnik <bkoz@redhat.com> -#   Copyright (c) 2012 Zack Weinberg <zackw@panix.com> -#   Copyright (c) 2013 Roy Stogner <roystgnr@ices.utexas.edu> -# -#   Copying and distribution of this file, with or without modification, are -#   permitted in any medium without royalty provided the copyright notice -#   and this notice are preserved. This file is offered as-is, without any -#   warranty. - -#serial 3 - -m4_define([_AX_CXX_COMPILE_STDCXX_11_testbody], [ -  template <typename T> -    struct check -    { -      static_assert(sizeof(int) <= sizeof(T), "not big enough"); -    }; - -    typedef check<check<bool>> right_angle_brackets; - -    int a; -    decltype(a) b; - -    typedef check<int> check_type; -    check_type c; -    check_type&& cr = static_cast<check_type&&>(c); - -    auto d = a; -]) - -AC_DEFUN([AX_CXX_COMPILE_STDCXX_11], [dnl -  m4_if([$1], [], [], -        [$1], [ext], [], -        [$1], [noext], [], -        [m4_fatal([invalid argument `$1' to AX_CXX_COMPILE_STDCXX_11])])dnl -  m4_if([$2], [], [ax_cxx_compile_cxx11_required=true], -        [$2], [mandatory], [ax_cxx_compile_cxx11_required=true], -        [$2], [optional], [ax_cxx_compile_cxx11_required=false], -        [m4_fatal([invalid second argument `$2' to AX_CXX_COMPILE_STDCXX_11])])dnl -  AC_LANG_PUSH([C++])dnl -  ac_success=no -  AC_CACHE_CHECK(whether $CXX supports C++11 features by default, -  ax_cv_cxx_compile_cxx11, -  [AC_COMPILE_IFELSE([AC_LANG_SOURCE([_AX_CXX_COMPILE_STDCXX_11_testbody])], -    [ax_cv_cxx_compile_cxx11=yes], -    [ax_cv_cxx_compile_cxx11=no])]) -  if test x$ax_cv_cxx_compile_cxx11 = xyes; then -    ac_success=yes -  fi - -  restore_it="$CXXFLAGS" -  m4_if([$1], [noext], [], [dnl -  if test x$ac_success = xno; then -    for switch in -std=gnu++11 -std=gnu++0x; do -      cachevar=AS_TR_SH([ax_cv_cxx_compile_cxx11_$switch]) -      AC_CACHE_CHECK(whether $CXX supports C++11 features with $switch, -                     $cachevar, -        [ac_save_CXXFLAGS="$CXXFLAGS" -         CXXFLAGS="$CXXFLAGS $switch" -         AC_COMPILE_IFELSE([AC_LANG_SOURCE([_AX_CXX_COMPILE_STDCXX_11_testbody])], -          [eval $cachevar=yes], -          [eval $cachevar=no]) -         CXXFLAGS="$ac_save_CXXFLAGS"]) -      if eval test x\$$cachevar = xyes; then -        CXXFLAGS="$CXXFLAGS" -        c11switch="$switch" -        ac_success=yes -        break -      fi -    done -  fi]) - -  m4_if([$1], [ext], [], [dnl -  if test x$ac_success = xno; then -    for switch in -std=c++11 -std=c++0x; do -      cachevar=AS_TR_SH([ax_cv_cxx_compile_cxx11_$switch]) -      AC_CACHE_CHECK(whether $CXX supports C++11 features with $switch, -                     $cachevar, -        [ac_save_CXXFLAGS="$CXXFLAGS" -         CXXFLAGS="$CXXFLAGS $switch" -         AC_COMPILE_IFELSE([AC_LANG_SOURCE([_AX_CXX_COMPILE_STDCXX_11_testbody])], -          [eval $cachevar=yes], -          [eval $cachevar=no]) -         CXXFLAGS="$ac_save_CXXFLAGS"]) -      if eval test x\$$cachevar = xyes; then -        CXXFLAGS="$CXXFLAGS" -        c11switch="$switch" -        ac_success=yes -        break -      fi -    done -  fi]) -  CXXFLAGS="$restore_it" -  AC_SUBST([CXX11_SWITCH], ["$c11switch"]) -  AC_LANG_POP([C++]) -  if test x$ax_cxx_compile_cxx11_required = xtrue; then -    if test x$ac_success = xno; then -      AC_MSG_ERROR([*** A compiler with support for C++11 language features is required.]) -    fi -  else -    if test x$ac_success = xno; then -      HAVE_CXX11=0 -      AC_MSG_NOTICE([No compiler with C++11 support was found]) -    else -      HAVE_CXX11=1 -      AC_DEFINE(HAVE_CXX11,1, -                [define if the compiler supports basic C++11 syntax]) -    fi -    AM_CONDITIONAL([HAVE_CXX11],[test "x$HAVE_CXX11" = "x1"]) - -    AC_SUBST(HAVE_CXX11) -  fi -]) - diff --git a/m4/ax_pthread.m4 b/m4/ax_pthread.m4 deleted file mode 100644 index d383ad5c..00000000 --- a/m4/ax_pthread.m4 +++ /dev/null @@ -1,332 +0,0 @@ -# =========================================================================== -#        http://www.gnu.org/software/autoconf-archive/ax_pthread.html -# =========================================================================== -# -# SYNOPSIS -# -#   AX_PTHREAD([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]]) -# -# DESCRIPTION -# -#   This macro figures out how to build C programs using POSIX threads. It -#   sets the PTHREAD_LIBS output variable to the threads library and linker -#   flags, and the PTHREAD_CFLAGS output variable to any special C compiler -#   flags that are needed. (The user can also force certain compiler -#   flags/libs to be tested by setting these environment variables.) -# -#   Also sets PTHREAD_CC to any special C compiler that is needed for -#   multi-threaded programs (defaults to the value of CC otherwise). (This -#   is necessary on AIX to use the special cc_r compiler alias.) -# -#   NOTE: You are assumed to not only compile your program with these flags, -#   but also link it with them as well. e.g. you should link with -#   $PTHREAD_CC $CFLAGS $PTHREAD_CFLAGS $LDFLAGS ... $PTHREAD_LIBS $LIBS -# -#   If you are only building threads programs, you may wish to use these -#   variables in your default LIBS, CFLAGS, and CC: -# -#     LIBS="$PTHREAD_LIBS $LIBS" -#     CFLAGS="$CFLAGS $PTHREAD_CFLAGS" -#     CC="$PTHREAD_CC" -# -#   In addition, if the PTHREAD_CREATE_JOINABLE thread-attribute constant -#   has a nonstandard name, defines PTHREAD_CREATE_JOINABLE to that name -#   (e.g. PTHREAD_CREATE_UNDETACHED on AIX). -# -#   Also HAVE_PTHREAD_PRIO_INHERIT is defined if pthread is found and the -#   PTHREAD_PRIO_INHERIT symbol is defined when compiling with -#   PTHREAD_CFLAGS. -# -#   ACTION-IF-FOUND is a list of shell commands to run if a threads library -#   is found, and ACTION-IF-NOT-FOUND is a list of commands to run it if it -#   is not found. If ACTION-IF-FOUND is not specified, the default action -#   will define HAVE_PTHREAD. -# -#   Please let the authors know if this macro fails on any platform, or if -#   you have any other suggestions or comments. This macro was based on work -#   by SGJ on autoconf scripts for FFTW (http://www.fftw.org/) (with help -#   from M. Frigo), as well as ac_pthread and hb_pthread macros posted by -#   Alejandro Forero Cuervo to the autoconf macro repository. We are also -#   grateful for the helpful feedback of numerous users. -# -#   Updated for Autoconf 2.68 by Daniel Richard G. -# -# LICENSE -# -#   Copyright (c) 2008 Steven G. Johnson <stevenj@alum.mit.edu> -#   Copyright (c) 2011 Daniel Richard G. <skunk@iSKUNK.ORG> -# -#   This program is free software: you can redistribute it and/or modify it -#   under the terms of the GNU General Public License as published by the -#   Free Software Foundation, either version 3 of the License, or (at your -#   option) any later version. -# -#   This program is distributed in the hope that it will be useful, but -#   WITHOUT ANY WARRANTY; without even the implied warranty of -#   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General -#   Public License for more details. -# -#   You should have received a copy of the GNU General Public License along -#   with this program. If not, see <http://www.gnu.org/licenses/>. -# -#   As a special exception, the respective Autoconf Macro's copyright owner -#   gives unlimited permission to copy, distribute and modify the configure -#   scripts that are the output of Autoconf when processing the Macro. You -#   need not follow the terms of the GNU General Public License when using -#   or distributing such scripts, even though portions of the text of the -#   Macro appear in them. The GNU General Public License (GPL) does govern -#   all other use of the material that constitutes the Autoconf Macro. -# -#   This special exception to the GPL applies to versions of the Autoconf -#   Macro released by the Autoconf Archive. When you make and distribute a -#   modified version of the Autoconf Macro, you may extend this special -#   exception to the GPL to apply to your modified version as well. - -#serial 21 - -AU_ALIAS([ACX_PTHREAD], [AX_PTHREAD]) -AC_DEFUN([AX_PTHREAD], [ -AC_REQUIRE([AC_CANONICAL_HOST]) -AC_LANG_PUSH([C]) -ax_pthread_ok=no - -# We used to check for pthread.h first, but this fails if pthread.h -# requires special compiler flags (e.g. on True64 or Sequent). -# It gets checked for in the link test anyway. - -# First of all, check if the user has set any of the PTHREAD_LIBS, -# etcetera environment variables, and if threads linking works using -# them: -if test x"$PTHREAD_LIBS$PTHREAD_CFLAGS" != x; then -        save_CFLAGS="$CFLAGS" -        CFLAGS="$CFLAGS $PTHREAD_CFLAGS" -        save_LIBS="$LIBS" -        LIBS="$PTHREAD_LIBS $LIBS" -        AC_MSG_CHECKING([for pthread_join in LIBS=$PTHREAD_LIBS with CFLAGS=$PTHREAD_CFLAGS]) -        AC_TRY_LINK_FUNC([pthread_join], [ax_pthread_ok=yes]) -        AC_MSG_RESULT([$ax_pthread_ok]) -        if test x"$ax_pthread_ok" = xno; then -                PTHREAD_LIBS="" -                PTHREAD_CFLAGS="" -        fi -        LIBS="$save_LIBS" -        CFLAGS="$save_CFLAGS" -fi - -# We must check for the threads library under a number of different -# names; the ordering is very important because some systems -# (e.g. DEC) have both -lpthread and -lpthreads, where one of the -# libraries is broken (non-POSIX). - -# Create a list of thread flags to try.  Items starting with a "-" are -# C compiler flags, and other items are library names, except for "none" -# which indicates that we try without any flags at all, and "pthread-config" -# which is a program returning the flags for the Pth emulation library. - -ax_pthread_flags="pthreads none -Kthread -kthread lthread -pthread -pthreads -mthreads pthread --thread-safe -mt pthread-config" - -# The ordering *is* (sometimes) important.  Some notes on the -# individual items follow: - -# pthreads: AIX (must check this before -lpthread) -# none: in case threads are in libc; should be tried before -Kthread and -#       other compiler flags to prevent continual compiler warnings -# -Kthread: Sequent (threads in libc, but -Kthread needed for pthread.h) -# -kthread: FreeBSD kernel threads (preferred to -pthread since SMP-able) -# lthread: LinuxThreads port on FreeBSD (also preferred to -pthread) -# -pthread: Linux/gcc (kernel threads), BSD/gcc (userland threads) -# -pthreads: Solaris/gcc -# -mthreads: Mingw32/gcc, Lynx/gcc -# -mt: Sun Workshop C (may only link SunOS threads [-lthread], but it -#      doesn't hurt to check since this sometimes defines pthreads too; -#      also defines -D_REENTRANT) -#      ... -mt is also the pthreads flag for HP/aCC -# pthread: Linux, etcetera -# --thread-safe: KAI C++ -# pthread-config: use pthread-config program (for GNU Pth library) - -case ${host_os} in -        solaris*) - -        # On Solaris (at least, for some versions), libc contains stubbed -        # (non-functional) versions of the pthreads routines, so link-based -        # tests will erroneously succeed.  (We need to link with -pthreads/-mt/ -        # -lpthread.)  (The stubs are missing pthread_cleanup_push, or rather -        # a function called by this macro, so we could check for that, but -        # who knows whether they'll stub that too in a future libc.)  So, -        # we'll just look for -pthreads and -lpthread first: - -        ax_pthread_flags="-pthreads pthread -mt -pthread $ax_pthread_flags" -        ;; - -        darwin*) -        ax_pthread_flags="-pthread $ax_pthread_flags" -        ;; -esac - -# Clang doesn't consider unrecognized options an error unless we specify -# -Werror. 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 LIBS="-l$1 $LIBS" -])], -      [$4])dnl -AS_VAR_POPDEF([ac_Lib])dnl -])# AC_CHECK_LIB diff --git a/mteval/CMakeLists.txt b/mteval/CMakeLists.txt new file mode 100644 index 00000000..8217c116 --- /dev/null +++ b/mteval/CMakeLists.txt @@ -0,0 +1,68 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../utils) + +set(fast_score_SRCS fast_score.cc) +add_executable(fast_score ${fast_score_SRCS}) +target_link_libraries(fast_score mteval utils ${Boost_LIBRARIES} ${ZLIB_LIBRARIES}) + +set(mbr_kbest_SRCS mbr_kbest.cc) +add_executable(mbr_kbest ${mbr_kbest_SRCS}) +target_link_libraries(mbr_kbest mteval utils ${Boost_LIBRARIES} ${ZLIB_LIBRARIES}) + +set(TEST_SRCS scorer_test.cc) + +foreach(testSrc ${TEST_SRCS}) +  #Extract the filename without an extension (NAME_WE) +  get_filename_component(testName ${testSrc} NAME_WE) + +  #Add compile target +  set_source_files_properties(${testSrc} PROPERTIES COMPILE_FLAGS "-DBOOST_TEST_DYN_LINK -DTEST_DATA=\\\"test_data/\\\"") +  add_executable(${testName} ${testSrc}) + +  #link to Boost libraries AND your targets and dependencies +  target_link_libraries(${testName} mteval utils ${Boost_LIBRARIES} ${ZLIB_LIBRARIES}) + +  #I like to move testing binaries into a testBin directory +  set_target_properties(${testName} PROPERTIES  +      RUNTIME_OUTPUT_DIRECTORY  ${CMAKE_CURRENT_SOURCE_DIR}) + +  #Finally add it to test execution -  +  #Notice the WORKING_DIRECTORY and COMMAND +  add_test(NAME ${testName} COMMAND ${CMAKE_CURRENT_SOURCE_DIR}/${testName}  +     WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}) +endforeach(testSrc) + + + +set(mteval_STAT_SRCS +    aer_scorer.h +    comb_scorer.h +    external_scorer.h +    levenshtein.h +    ns.h +    ns_cer.h +    ns_comb.h +    ns_docscorer.h +    ns_ext.h +    ns_ssk.h +    ns_ter.h +    ns_wer.h +    scorer.h +    ter.h +    aer_scorer.cc +    comb_scorer.cc +    external_scorer.cc +    meteor_jar.cc +    ns.cc +    ns_cer.cc +    ns_comb.cc +    ns_docscorer.cc +    ns_ext.cc +    ns_ssk.cc +    ns_ter.cc +    ns_wer.cc +    scorer.cc +    ter.cc) + +add_library(mteval STATIC ${mteval_STAT_SRCS}) + + diff --git a/mteval/Makefile.am b/mteval/Makefile.am deleted file mode 100644 index aac3e6b5..00000000 --- a/mteval/Makefile.am +++ /dev/null @@ -1,52 +0,0 @@ -bin_PROGRAMS = \ -  fast_score \ -  mbr_kbest - -noinst_PROGRAMS = \ -  scorer_test -TESTS = scorer_test - -noinst_LIBRARIES = libmteval.a - -EXTRA_DIST = test_data - -libmteval_a_SOURCES = \ -  aer_scorer.h \ -  comb_scorer.h \ -  external_scorer.h \ -  levenshtein.h \ -  ns.h \ -  ns_cer.h \ -  ns_comb.h \ -  ns_docscorer.h \ -  ns_ext.h \ -  ns_ssk.h \ -  ns_ter.h \ -  ns_wer.h \ -  scorer.h \ -  ter.h \ -  aer_scorer.cc \ -  comb_scorer.cc \ -  external_scorer.cc \ -  meteor_jar.cc \ -  ns.cc \ -  ns_cer.cc \ -  ns_comb.cc \ -  ns_docscorer.cc \ -  ns_ext.cc \ -  ns_ssk.cc \ -  ns_ter.cc \ -  ns_wer.cc \ -  scorer.cc \ -  ter.cc - -fast_score_SOURCES = fast_score.cc -fast_score_LDADD = libmteval.a ../utils/libutils.a - -mbr_kbest_SOURCES = mbr_kbest.cc -mbr_kbest_LDADD = libmteval.a ../utils/libutils.a - -scorer_test_SOURCES = scorer_test.cc -scorer_test_LDADD = libmteval.a ../utils/libutils.a $(BOOST_UNIT_TEST_FRAMEWORK_LDFLAGS) $(BOOST_UNIT_TEST_FRAMEWORK_LIBS) - -AM_CPPFLAGS = -DTEST_DATA=\"$(top_srcdir)/mteval/test_data\" -DBOOST_TEST_DYN_LINK -W -Wall -Wno-sign-compare -I$(top_srcdir) -I$(top_srcdir)/utils -I$(top_srcdir)/klm diff --git a/mteval/ns.cc b/mteval/ns.cc index 075e0121..2c8bd806 100644 --- a/mteval/ns.cc +++ b/mteval/ns.cc @@ -13,6 +13,8 @@  #include <iostream>  #include <sstream> +#include "config.h" +  #include "tdict.h"  #include "filelib.h"  #include "stringlib.h" @@ -272,14 +274,14 @@ EvaluationMetric* EvaluationMetric::Instance(const string& imetric_id) {      } else if (metric_id == "TER") {        m = new TERMetric;      } else if (metric_id == "METEOR") { -#if HAVE_METEOR +#ifdef METEOR_JAR        if (!FileExists(meteor_jar_path)) {          cerr << meteor_jar_path << " not found!\n";          abort();        }        m = new ExternalMetric("METEOR", string("java -Xmx1536m -jar ") + meteor_jar_path + " - - -mira -lower -t tune -l en");  #else -      cerr << "cdec was not built with the --with-meteor option." << endl; +      cerr << "cdec was not built with the -DMETEOR_JAR=/path/to/meteor.jar option." << endl;        abort();  #endif      } else if (metric_id.find("COMB:") == 0) { diff --git a/training/CMakeLists.txt b/training/CMakeLists.txt new file mode 100644 index 00000000..c0ae42e8 --- /dev/null +++ b/training/CMakeLists.txt @@ -0,0 +1,14 @@ + +add_subdirectory(liblbfgs) +add_subdirectory(utils) +add_subdirectory(crf) +add_subdirectory(minrisk) +add_subdirectory(dpmert) +add_subdirectory(pro) +add_subdirectory(dtrain) +add_subdirectory(latent_svm) +add_subdirectory(mira) +add_subdirectory(rampion) +add_subdirectory(const_reorder) + + diff --git a/training/Makefile.am b/training/Makefile.am deleted file mode 100644 index 2812a9be..00000000 --- a/training/Makefile.am +++ /dev/null @@ -1,12 +0,0 @@ -SUBDIRS = \ -  liblbfgs \ -  utils \ -  crf \ -  minrisk \ -  dpmert \ -  pro \ -  dtrain \ -  latent_svm \ -  mira \ -  rampion \ -  const_reorder diff --git a/training/const_reorder/CMakeLists.txt b/training/const_reorder/CMakeLists.txt new file mode 100644 index 00000000..da074a23 --- /dev/null +++ b/training/const_reorder/CMakeLists.txt @@ -0,0 +1,9 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../utils) + +set(const_reorder_model_trainer_SRCS constituent_reorder_model.cc trainer.h trainer.cc) +add_executable(const_reorder_model_trainer ${const_reorder_model_trainer_SRCS}) +target_link_libraries(const_reorder_model_trainer utils ${Boost_LIBRARIES} z) + +set(argument_reorder_model_trainer_SRCS argument_reorder_model.cc trainer.h trainer.cc) +add_executable(argument_reorder_model_trainer ${argument_reorder_model_trainer_SRCS}) +target_link_libraries(argument_reorder_model_trainer utils ${Boost_LIBRARIES} z) diff --git a/training/const_reorder/Makefile.am b/training/const_reorder/Makefile.am deleted file mode 100644 index 2c681398..00000000 --- a/training/const_reorder/Makefile.am +++ /dev/null @@ -1,8 +0,0 @@ -bin_PROGRAMS = const_reorder_model_trainer argument_reorder_model_trainer - -AM_CPPFLAGS = -I$(top_srcdir) -I$(top_srcdir)/utils -I$(top_srcdir)/decoder - -const_reorder_model_trainer_SOURCES = constituent_reorder_model.cc trainer.h trainer.cc -const_reorder_model_trainer_LDADD = ../../utils/libutils.a -argument_reorder_model_trainer_SOURCES = argument_reorder_model.cc trainer.h trainer.cc -argument_reorder_model_trainer_LDADD = ../../utils/libutils.a diff --git a/training/crf/CMakeLists.txt b/training/crf/CMakeLists.txt new file mode 100644 index 00000000..4792983e --- /dev/null +++ b/training/crf/CMakeLists.txt @@ -0,0 +1,78 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../mteval) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../decoder) + + + +########### next target ############### + +set(mpi_batch_optimize_SRCS mpi_batch_optimize.cc cllh_observer.cc cllh_observer.h) +add_executable(mpi_batch_optimize ${mpi_batch_optimize_SRCS}) +target_link_libraries(mpi_batch_optimize training_utils libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) + +########### next target ############### + +set(mpi_adagrad_optimize_SRCS mpi_adagrad_optimize.cc cllh_observer.cc cllh_observer.h) + +add_executable(mpi_adagrad_optimize ${mpi_adagrad_optimize_SRCS}) + +target_link_libraries(mpi_adagrad_optimize ${KDE4_KDECORE_LIBS} training_utils libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) + + + +########### next target ############### + +set(mpi_compute_cllh_SRCS mpi_compute_cllh.cc cllh_observer.cc cllh_observer.h) + +add_executable(mpi_compute_cllh ${mpi_compute_cllh_SRCS}) + +target_link_libraries(mpi_compute_cllh ${KDE4_KDECORE_LIBS} libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) + + + +########### next target ############### + +set(mpi_extract_features_SRCS mpi_extract_features.cc) + +add_executable(mpi_extract_features ${mpi_extract_features_SRCS}) + +target_link_libraries(mpi_extract_features ${KDE4_KDECORE_LIBS} libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) + + + +########### next target ############### + +set(mpi_extract_reachable_SRCS mpi_extract_reachable.cc) + +add_executable(mpi_extract_reachable ${mpi_extract_reachable_SRCS}) + +target_link_libraries(mpi_extract_reachable ${KDE4_KDECORE_LIBS} libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) + + +########### next target ############### + +set(mpi_flex_optimize_SRCS mpi_flex_optimize.cc) + +add_executable(mpi_flex_optimize ${mpi_flex_optimize_SRCS}) + +target_link_libraries(mpi_flex_optimize ${KDE4_KDECORE_LIBS} training_utils libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) + + +########### next target ############### + +set(mpi_online_optimize_SRCS mpi_online_optimize.cc) + +add_executable(mpi_online_optimize ${mpi_online_optimize_SRCS}) + +target_link_libraries(mpi_online_optimize ${KDE4_KDECORE_LIBS} training_utils libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) + +########### next target ############### + +set(mpi_baum_welch_SRCS mpi_baum_welch.cc) + +add_executable(mpi_baum_welch ${mpi_baum_welch_SRCS}) + +target_link_libraries(mpi_baum_welch ${KDE4_KDECORE_LIBS} libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) + + diff --git a/training/crf/Makefile.am b/training/crf/Makefile.am deleted file mode 100644 index 87d9f838..00000000 --- a/training/crf/Makefile.am +++ /dev/null @@ -1,36 +0,0 @@ -bin_PROGRAMS = \ -  mpi_batch_optimize \ -  mpi_adagrad_optimize \ -  mpi_compute_cllh \ -  mpi_extract_features \ -  mpi_extract_reachable \ -  mpi_flex_optimize \ -  mpi_online_optimize \ -  mpi_baum_welch - -mpi_baum_welch_SOURCES = mpi_baum_welch.cc -mpi_baum_welch_LDADD = ../../decoder/libcdec.a ../../klm/search/libksearch.a ../../mteval/libmteval.a ../../utils/libutils.a ../../klm/lm/libklm.a ../../klm/util/libklm_util.a ../../klm/util/double-conversion/libklm_util_double.a $(BOOST_MPI_LDFLAGS) $(BOOST_MPI_LIBS) -lz - -mpi_adagrad_optimize_SOURCES = mpi_adagrad_optimize.cc cllh_observer.cc cllh_observer.h -mpi_adagrad_optimize_LDADD = ../../training/utils/libtraining_utils.a ../../decoder/libcdec.a ../../klm/search/libksearch.a ../../mteval/libmteval.a ../../utils/libutils.a ../../klm/lm/libklm.a ../../klm/util/libklm_util.a ../../klm/util/double-conversion/libklm_util_double.a $(BOOST_MPI_LDFLAGS) $(BOOST_MPI_LIBS) -lz - -mpi_online_optimize_SOURCES = mpi_online_optimize.cc -mpi_online_optimize_LDADD = ../../training/utils/libtraining_utils.a ../../decoder/libcdec.a ../../klm/search/libksearch.a ../../mteval/libmteval.a ../../utils/libutils.a ../../klm/lm/libklm.a ../../klm/util/libklm_util.a ../../klm/util/double-conversion/libklm_util_double.a $(BOOST_MPI_LDFLAGS) $(BOOST_MPI_LIBS) -lz - -mpi_flex_optimize_SOURCES = mpi_flex_optimize.cc -mpi_flex_optimize_LDADD = ../../training/utils/libtraining_utils.a ../../decoder/libcdec.a ../../klm/search/libksearch.a ../../mteval/libmteval.a ../../utils/libutils.a ../../klm/lm/libklm.a ../../klm/util/libklm_util.a ../../klm/util/double-conversion/libklm_util_double.a $(BOOST_MPI_LDFLAGS) $(BOOST_MPI_LIBS) -lz - -mpi_extract_reachable_SOURCES = mpi_extract_reachable.cc -mpi_extract_reachable_LDADD = ../../decoder/libcdec.a ../../klm/search/libksearch.a ../../mteval/libmteval.a ../../utils/libutils.a ../../klm/lm/libklm.a ../../klm/util/libklm_util.a ../../klm/util/double-conversion/libklm_util_double.a $(BOOST_MPI_LDFLAGS) $(BOOST_MPI_LIBS) -lz - -mpi_extract_features_SOURCES = mpi_extract_features.cc -mpi_extract_features_LDADD = ../../decoder/libcdec.a ../../klm/search/libksearch.a ../../mteval/libmteval.a ../../utils/libutils.a ../../klm/lm/libklm.a ../../klm/util/libklm_util.a ../../klm/util/double-conversion/libklm_util_double.a $(BOOST_MPI_LDFLAGS) $(BOOST_MPI_LIBS) -lz - -mpi_batch_optimize_SOURCES = mpi_batch_optimize.cc cllh_observer.cc cllh_observer.h -mpi_batch_optimize_LDADD = ../../training/utils/libtraining_utils.a ../../decoder/libcdec.a ../../klm/search/libksearch.a ../../mteval/libmteval.a ../../utils/libutils.a ../../klm/lm/libklm.a ../../klm/util/libklm_util.a ../../klm/util/double-conversion/libklm_util_double.a $(BOOST_MPI_LDFLAGS) $(BOOST_MPI_LIBS) -lz - -mpi_compute_cllh_SOURCES = mpi_compute_cllh.cc cllh_observer.cc cllh_observer.h -mpi_compute_cllh_LDADD = ../../decoder/libcdec.a ../../klm/search/libksearch.a ../../mteval/libmteval.a ../../utils/libutils.a ../../klm/lm/libklm.a ../../klm/util/libklm_util.a ../../klm/util/double-conversion/libklm_util_double.a $(BOOST_MPI_LDFLAGS) $(BOOST_MPI_LIBS) -lz - -AM_CPPFLAGS = -DBOOST_TEST_DYN_LINK -W -Wall -Wno-sign-compare -I$(top_srcdir)/training -I$(top_srcdir)/training/utils -I$(top_srcdir)/utils -I$(top_srcdir)/decoder -I$(top_srcdir)/mteval - diff --git a/training/dpmert/CMakeLists.txt b/training/dpmert/CMakeLists.txt new file mode 100644 index 00000000..382af070 --- /dev/null +++ b/training/dpmert/CMakeLists.txt @@ -0,0 +1,59 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../mteval) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../decoder) + +set(dpmert_SRCS +    mert_geometry.cc +    ces.cc +    error_surface.cc +    mr_dpmert_map.cc +    line_optimizer.cc +    ces.h +    error_surface.h +    line_optimizer.h +    mert_geometry.h) +add_library(dpmert ${dpmert_SRCS}) + +set(mr_dpmert_map_SRCS mr_dpmert_map.cc) + +add_executable(mr_dpmert_map ${mr_dpmert_map_SRCS}) +target_link_libraries(mr_dpmert_map dpmert training_utils libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) + +########### next target ############### + +set(mr_dpmert_reduce_SRCS +    mr_dpmert_reduce.cc) + +add_executable(mr_dpmert_reduce ${mr_dpmert_reduce_SRCS}) +target_link_libraries(mr_dpmert_reduce dpmert training_utils libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) + + +set(mr_dpmert_generate_mapper_input_SRCS mr_dpmert_generate_mapper_input.cc) +add_executable(mr_dpmert_generate_mapper_input ${mr_dpmert_generate_mapper_input_SRCS}) +target_link_libraries(mr_dpmert_generate_mapper_input dpmert training_utils libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) + +set(TEST_SRCS lo_test.cc) +foreach(testSrc ${TEST_SRCS}) +  #Extract the filename without an extension (NAME_WE) +  get_filename_component(testName ${testSrc} NAME_WE) + +  #Add compile target +  set_source_files_properties(${testSrc} PROPERTIES COMPILE_FLAGS "-DBOOST_TEST_DYN_LINK -DTEST_DATA=\\\"test_data/\\\"") +  add_executable(${testName} ${testSrc}) + +  #link to Boost libraries AND your targets and dependencies +  target_link_libraries(${testName} dpmert training_utils libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} ${ZLIB_LIBRARIES}) + +  #I like to move testing binaries into a testBin directory +  set_target_properties(${testName} PROPERTIES  +      RUNTIME_OUTPUT_DIRECTORY  ${CMAKE_CURRENT_SOURCE_DIR}) + +  #Finally add it to test execution -  +  #Notice the WORKING_DIRECTORY and COMMAND +  add_test(NAME ${testName} COMMAND ${CMAKE_CURRENT_SOURCE_DIR}/${testName}  +     WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}) +endforeach(testSrc) + + + diff --git a/training/dpmert/Makefile.am b/training/dpmert/Makefile.am deleted file mode 100644 index b85bb275..00000000 --- a/training/dpmert/Makefile.am +++ /dev/null @@ -1,27 +0,0 @@ -bin_PROGRAMS = \ -  mr_dpmert_map \ -  mr_dpmert_reduce \ -  mr_dpmert_generate_mapper_input - -noinst_PROGRAMS = \ -  lo_test -TESTS = lo_test - -mr_dpmert_generate_mapper_input_SOURCES = mr_dpmert_generate_mapper_input.cc line_optimizer.cc -mr_dpmert_generate_mapper_input_LDADD = ../../decoder/libcdec.a ../../mteval/libmteval.a ../../utils/libutils.a - -# nbest2hg_SOURCES = nbest2hg.cc -# nbest2hg_LDADD = $(top_srcdir)/decoder/libcdec.a $(top_srcdir)/mteval/libmteval.a $(top_srcdir)/utils/libutils.a -lfst - -mr_dpmert_map_SOURCES = mert_geometry.cc ces.cc error_surface.cc mr_dpmert_map.cc line_optimizer.cc ces.h error_surface.h line_optimizer.h mert_geometry.h -mr_dpmert_map_LDADD = ../../decoder/libcdec.a ../../mteval/libmteval.a ../../utils/libutils.a - -mr_dpmert_reduce_SOURCES = error_surface.cc ces.cc mr_dpmert_reduce.cc line_optimizer.cc mert_geometry.cc ces.h error_surface.h line_optimizer.h mert_geometry.h -mr_dpmert_reduce_LDADD = ../../decoder/libcdec.a ../../mteval/libmteval.a ../../utils/libutils.a - -lo_test_SOURCES = lo_test.cc ces.cc mert_geometry.cc error_surface.cc line_optimizer.cc ces.h error_surface.h line_optimizer.h mert_geometry.h -lo_test_LDADD = $(BOOST_UNIT_TEST_FRAMEWORK_LDFLAGS) $(BOOST_UNIT_TEST_FRAMEWORK_LIBS) ../../decoder/libcdec.a ../../mteval/libmteval.a ../../utils/libutils.a - -EXTRA_DIST = test_data dpmert.pl - -AM_CPPFLAGS = -DTEST_DATA=\"$(top_srcdir)/training/dpmert/test_data\" -DBOOST_TEST_DYN_LINK -W -Wall -Wno-sign-compare -I$(top_srcdir)/utils -I$(top_srcdir)/decoder -I$(top_srcdir)/mteval diff --git a/training/dpmert/ces.h b/training/dpmert/ces.h index e4fa2080..b179499d 100644 --- a/training/dpmert/ces.h +++ b/training/dpmert/ces.h @@ -1,9 +1,9 @@  #ifndef _CES_H_  #define _CES_H_ -class ConvexHull; +struct ConvexHull;  class Hypergraph; -class SegmentEvaluator; +struct SegmentEvaluator;  class ErrorSurface;  class EvaluationMetric; diff --git a/training/dtrain/CMakeLists.txt b/training/dtrain/CMakeLists.txt new file mode 100644 index 00000000..653cfe2b --- /dev/null +++ b/training/dtrain/CMakeLists.txt @@ -0,0 +1,15 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../mteval) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../decoder) + +set(dtrain_SRCS +    dtrain.cc +    score.cc +    dtrain.h +    kbestget.h +    ksampler.h +    pairsampling.h +    score.h) +add_executable(dtrain ${dtrain_SRCS}) +target_link_libraries(dtrain libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) diff --git a/training/dtrain/Makefile.am b/training/dtrain/Makefile.am deleted file mode 100644 index 844c790d..00000000 --- a/training/dtrain/Makefile.am +++ /dev/null @@ -1,7 +0,0 @@ -bin_PROGRAMS = dtrain - -dtrain_SOURCES = dtrain.cc score.cc dtrain.h kbestget.h ksampler.h pairsampling.h score.h -dtrain_LDADD   = ../../decoder/libcdec.a ../../klm/search/libksearch.a ../../mteval/libmteval.a ../../utils/libutils.a ../../klm/lm/libklm.a ../../klm/util/libklm_util.a ../../klm/util/double-conversion/libklm_util_double.a - -AM_CPPFLAGS = -W -Wall -Wno-sign-compare -I$(top_srcdir)/utils -I$(top_srcdir)/decoder -I$(top_srcdir)/mteval - diff --git a/training/latent_svm/CMakeLists.txt b/training/latent_svm/CMakeLists.txt new file mode 100644 index 00000000..ec48e02f --- /dev/null +++ b/training/latent_svm/CMakeLists.txt @@ -0,0 +1,8 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../mteval) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../decoder) + +set(latent_svm_SRCS latent_svm.cc) +add_executable(latent_svm ${latent_svm_SRCS}) +target_link_libraries(latent_svm libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) diff --git a/training/latent_svm/Makefile.am b/training/latent_svm/Makefile.am deleted file mode 100644 index 65c5e038..00000000 --- a/training/latent_svm/Makefile.am +++ /dev/null @@ -1,6 +0,0 @@ -bin_PROGRAMS = latent_svm - -latent_svm_SOURCES = latent_svm.cc -latent_svm_LDADD = ../..//decoder/libcdec.a ../../klm/search/libksearch.a ../../mteval/libmteval.a ../../utils/libutils.a ../../klm/lm/libklm.a ../../klm/util/libklm_util.a ../../klm/util/double-conversion/libklm_util_double.a - -AM_CPPFLAGS = -W -Wall -Wno-sign-compare -I$(top_srcdir)/utils -I$(top_srcdir)/decoder -I$(top_srcdir)/mteval diff --git a/training/liblbfgs/CMakeLists.txt b/training/liblbfgs/CMakeLists.txt new file mode 100644 index 00000000..d936c0ab --- /dev/null +++ b/training/liblbfgs/CMakeLists.txt @@ -0,0 +1,37 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/..) + + +set(lbfgs_STAT_SRCS +    lbfgs.c +    arithmetic_ansi.h +    arithmetic_sse_double.h +    arithmetic_sse_float.h +    lbfgs++.h +    lbfgs.h) + +add_library(lbfgs STATIC ${lbfgs_STAT_SRCS}) + +set(TEST_SRCS ll_test.cc) + +foreach(testSrc ${TEST_SRCS}) +  #Extract the filename without an extension (NAME_WE) +  get_filename_component(testName ${testSrc} NAME_WE) + +  #Add compile target +  set_source_files_properties(${testSrc} PROPERTIES COMPILE_FLAGS "-DBOOST_TEST_DYN_LINK -DTEST_DATA=\\\"test_data/\\\"") +  add_executable(${testName} ${testSrc}) + +  #link to Boost libraries AND your targets and dependencies +  target_link_libraries(${testName} lbfgs ${Boost_LIBRARIES} ${ZLIB_LIBRARIES}) + +  #I like to move testing binaries into a testBin directory +  set_target_properties(${testName} PROPERTIES  +      RUNTIME_OUTPUT_DIRECTORY  ${CMAKE_CURRENT_SOURCE_DIR}) + +  #Finally add it to test execution -  +  #Notice the WORKING_DIRECTORY and COMMAND +  add_test(NAME ${testName} COMMAND ${CMAKE_CURRENT_SOURCE_DIR}/${testName}  +     WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}) +endforeach(testSrc) + + diff --git a/training/liblbfgs/Makefile.am b/training/liblbfgs/Makefile.am deleted file mode 100644 index aa3af377..00000000 --- a/training/liblbfgs/Makefile.am +++ /dev/null @@ -1,21 +0,0 @@ -noinst_LIBRARIES = liblbfgs.a - -noinst_PROGRAMS = ll_test -ll_test_SOURCES = ll_test.cc -ll_test_LDADD = liblbfgs.a -lz -TESTS = ll_test - -liblbfgs_a_SOURCES = \ -  lbfgs.c \ -  arithmetic_ansi.h \ -  arithmetic_sse_double.h \ -  arithmetic_sse_float.h \ -  lbfgs++.h \ -  lbfgs.h - -################################################################ -# do NOT NOT NOT add any other -I includes NO NO NO NO NO ###### -AM_LDFLAGS = liblbfgs.a -lz -AM_CPPFLAGS = -DBOOST_TEST_DYN_LINK -W -Wall -I$(top_srcdir)/training -I$(top_srcdir)/training/liblbfgs -################################################################ - diff --git a/training/minrisk/CMakeLists.txt b/training/minrisk/CMakeLists.txt new file mode 100644 index 00000000..0795bc54 --- /dev/null +++ b/training/minrisk/CMakeLists.txt @@ -0,0 +1,9 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/..) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../mteval) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../decoder) + +set(minrisk_optimize_SRCS minrisk_optimize.cc) +add_executable(minrisk_optimize ${minrisk_optimize_SRCS}) +target_link_libraries(minrisk_optimize training_utils libcdec mteval utils lbfgs ${Boost_LIBRARIES} z) diff --git a/training/minrisk/Makefile.am b/training/minrisk/Makefile.am deleted file mode 100644 index ebf6fa91..00000000 --- a/training/minrisk/Makefile.am +++ /dev/null @@ -1,8 +0,0 @@ -bin_PROGRAMS = minrisk_optimize - -minrisk_optimize_SOURCES = minrisk_optimize.cc -minrisk_optimize_LDADD = ../../training/utils/libtraining_utils.a ../../decoder/libcdec.a ../../mteval/libmteval.a ../../utils/libutils.a ../../training/liblbfgs/liblbfgs.a - -EXTRA_DIST = minrisk.pl minrisk_generate_input.pl - -AM_CPPFLAGS = -W -Wall -I$(top_srcdir)/utils -I$(top_srcdir)/decoder -I$(top_srcdir)/mteval -I$(top_srcdir)/training -I$(top_srcdir)/training/utils diff --git a/training/minrisk/minrisk_optimize.cc b/training/minrisk/minrisk_optimize.cc index a2938fb0..f90c7118 100644 --- a/training/minrisk/minrisk_optimize.cc +++ b/training/minrisk/minrisk_optimize.cc @@ -163,7 +163,7 @@ int main(int argc, char** argv) {    cerr << "Loading hypergraphs...\n";    while(getline(in, line)) {      istringstream is(line); -    int sent_id; +    int sent_id = 0;      kis.resize(kis.size() + 1);      training::CandidateSet& curkbest = kis.back();      string kbest_file; diff --git a/training/mira/CMakeLists.txt b/training/mira/CMakeLists.txt new file mode 100644 index 00000000..3a8fa516 --- /dev/null +++ b/training/mira/CMakeLists.txt @@ -0,0 +1,17 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../mteval) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../decoder) + +set(kbest_mira_SRCS kbest_mira.cc) +add_executable(kbest_mira ${kbest_mira_SRCS}) +target_link_libraries(kbest_mira ${KDE4_KDECORE_LIBS} libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) + +set(kbest_cut_mira_SRCS kbest_cut_mira.cc) +add_executable(kbest_cut_mira ${kbest_cut_mira_SRCS}) +target_link_libraries(kbest_cut_mira ${KDE4_KDECORE_LIBS} libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) + +set(ada_opt_sm_SRCS ada_opt_sm.cc) +add_executable(ada_opt_sm ${ada_opt_sm_SRCS}) +target_link_libraries(ada_opt_sm ${KDE4_KDECORE_LIBS} training_utils libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) + diff --git a/training/mira/Makefile.am b/training/mira/Makefile.am deleted file mode 100644 index a318cf6e..00000000 --- a/training/mira/Makefile.am +++ /dev/null @@ -1,20 +0,0 @@ -bin_PROGRAMS = \ -  kbest_mira \ -  kbest_cut_mira \ -  ada_opt_sm - -EXTRA_DIST = mira.py - -ada_opt_sm_SOURCES = ada_opt_sm.cc -ada_opt_sm_LDFLAGS= -rdynamic -ada_opt_sm_LDADD = ../utils/libtraining_utils.a ../../decoder/libcdec.a ../../klm/search/libksearch.a ../../mteval/libmteval.a ../../utils/libutils.a ../../klm/lm/libklm.a ../../klm/util/libklm_util.a ../../klm/util/double-conversion/libklm_util_double.a - -kbest_mira_SOURCES = kbest_mira.cc -kbest_mira_LDFLAGS= -rdynamic -kbest_mira_LDADD = ../../decoder/libcdec.a ../../klm/search/libksearch.a ../../mteval/libmteval.a ../../utils/libutils.a ../../klm/lm/libklm.a ../../klm/util/libklm_util.a ../../klm/util/double-conversion/libklm_util_double.a - -kbest_cut_mira_SOURCES = kbest_cut_mira.cc -kbest_cut_mira_LDFLAGS= -rdynamic -kbest_cut_mira_LDADD = ../../decoder/libcdec.a ../../klm/search/libksearch.a ../../mteval/libmteval.a ../../utils/libutils.a ../../klm/lm/libklm.a ../../klm/util/libklm_util.a ../../klm/util/double-conversion/libklm_util_double.a - -AM_CPPFLAGS = -W -Wall -Wno-sign-compare -I$(top_srcdir)/utils -I$(top_srcdir)/decoder -I$(top_srcdir)/mteval -I$(top_srcdir)/training/utils diff --git a/training/pro/CMakeLists.txt b/training/pro/CMakeLists.txt new file mode 100644 index 00000000..5ee09a74 --- /dev/null +++ b/training/pro/CMakeLists.txt @@ -0,0 +1,18 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/..) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../mteval) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../decoder) + +########### next target ############### + +set(mr_pro_map_SRCS mr_pro_map.cc) +add_executable(mr_pro_map ${mr_pro_map_SRCS}) +target_link_libraries(mr_pro_map training_utils libcdec ksearch mteval utils klm klm_util klm_util_double ${Boost_LIBRARIES} z) + +########### next target ############### + +set(mr_pro_reduce_SRCS mr_pro_reduce.cc) +add_executable(mr_pro_reduce ${mr_pro_reduce_SRCS}) +target_link_libraries(mr_pro_reduce lbfgs utils ${Boost_LIBRARIES} z) + diff --git a/training/pro/Makefile.am b/training/pro/Makefile.am deleted file mode 100644 index 09364804..00000000 --- a/training/pro/Makefile.am +++ /dev/null @@ -1,13 +0,0 @@ -bin_PROGRAMS = \ -  mr_pro_map \ -  mr_pro_reduce - -mr_pro_map_SOURCES = mr_pro_map.cc -mr_pro_map_LDADD = ../../training/utils/libtraining_utils.a ../../decoder/libcdec.a ../../mteval/libmteval.a ../../utils/libutils.a - -mr_pro_reduce_SOURCES = mr_pro_reduce.cc -mr_pro_reduce_LDADD = ../../training/liblbfgs/liblbfgs.a ../../utils/libutils.a - -EXTRA_DIST = mr_pro_generate_mapper_input.pl pro.pl - -AM_CPPFLAGS = -W -Wall -Wno-sign-compare -I$(top_srcdir)/utils -I$(top_srcdir)/decoder -I$(top_srcdir)/mteval -I$(top_srcdir)/training/utils -I$(top_srcdir)/training diff --git a/training/rampion/CMakeLists.txt b/training/rampion/CMakeLists.txt new file mode 100644 index 00000000..8a60b5ff --- /dev/null +++ b/training/rampion/CMakeLists.txt @@ -0,0 +1,8 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../mteval) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../decoder) + +set(rampion_cccp_SRCS rampion_cccp.cc) +add_executable(rampion_cccp ${rampion_cccp_SRCS}) +target_link_libraries(rampion_cccp training_utils libcdec mteval utils ${Boost_LIBRARIES} z) diff --git a/training/rampion/Makefile.am b/training/rampion/Makefile.am deleted file mode 100644 index c72283cd..00000000 --- a/training/rampion/Makefile.am +++ /dev/null @@ -1,8 +0,0 @@ -bin_PROGRAMS = rampion_cccp - -rampion_cccp_SOURCES = rampion_cccp.cc -rampion_cccp_LDADD = ../../training/utils/libtraining_utils.a ../../decoder/libcdec.a ../../mteval/libmteval.a ../../utils/libutils.a - -EXTRA_DIST = rampion.pl rampion_generate_input.pl - -AM_CPPFLAGS = -W -Wall $(GTEST_CPPFLAGS) -I$(top_srcdir)/utils -I$(top_srcdir)/decoder -I$(top_srcdir)/mteval -I$(top_srcdir)/training/utils diff --git a/training/utils/CMakeLists.txt b/training/utils/CMakeLists.txt new file mode 100644 index 00000000..1734ee73 --- /dev/null +++ b/training/utils/CMakeLists.txt @@ -0,0 +1,32 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../utils) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../mteval) +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../../decoder) + +set(training_utils_STAT_SRCS +    candidate_set.h +    entropy.h +    lbfgs.h +    online_optimizer.h +    optimize.h +    risk.h +    sentserver.h +    candidate_set.cc +    entropy.cc +    optimize.cc +    online_optimizer.cc +    risk.cc) + +add_library(training_utils STATIC ${training_utils_STAT_SRCS}) + + +set(sentserver_SRCS sentserver.cc) +add_executable(sentserver ${sentserver_SRCS}) +target_link_libraries(sentserver) + +set(sentclient_SRCS sentclient.cc) +add_executable(sentclient ${sentclient_SRCS}) +target_link_libraries(sentclient) + +set(grammar_convert_SRCS grammar_convert.cc) +add_executable(grammar_convert ${grammar_convert_SRCS}) +target_link_libraries(grammar_convert libcdec mteval utils ${Boost_LIBRARIES} z) diff --git a/training/utils/Makefile.am b/training/utils/Makefile.am deleted file mode 100644 index edaaf3d4..00000000 --- a/training/utils/Makefile.am +++ /dev/null @@ -1,48 +0,0 @@ -noinst_LIBRARIES = libtraining_utils.a - -bin_PROGRAMS = \ -  sentserver \ -  sentclient \ -  grammar_convert - -noinst_PROGRAMS = \ -  lbfgs_test \ -  optimize_test - -EXTRA_DIST = decode-and-evaluate.pl libcall.pl parallelize.pl - -sentserver_SOURCES = sentserver.cc -sentserver_LDFLAGS = $(PTHREAD_LIBS) -sentserver_CXXFLAGS = $(PTHREAD_CFLAGS) - -sentclient_SOURCES = sentclient.cc -sentclient_LDFLAGS = $(PTHREAD_LIBS) -sentclient_CXXFLAGS = $(PTHREAD_CFLAGS) - -TESTS = lbfgs_test optimize_test - -libtraining_utils_a_SOURCES = \ -  candidate_set.h \ -  entropy.h \ -  lbfgs.h \ -  online_optimizer.h \ -  optimize.h \ -  risk.h \ -  sentserver.h \ -  candidate_set.cc \ -  entropy.cc \ -  optimize.cc \ -  online_optimizer.cc \ -  risk.cc - -optimize_test_SOURCES = optimize_test.cc -optimize_test_LDADD = libtraining_utils.a ../../utils/libutils.a - -grammar_convert_SOURCES = grammar_convert.cc -grammar_convert_LDADD = ../../decoder/libcdec.a ../../mteval/libmteval.a ../../utils/libutils.a - -lbfgs_test_SOURCES = lbfgs_test.cc -lbfgs_test_LDADD = ../../utils/libutils.a - -AM_CPPFLAGS = -W -Wall -Wno-sign-compare -I$(top_srcdir)/decoder -I$(top_srcdir)/utils -I$(top_srcdir)/mteval -I$(top_srcdir)/klm - diff --git a/utils/CMakeLists.txt b/utils/CMakeLists.txt new file mode 100644 index 00000000..17436263 --- /dev/null +++ b/utils/CMakeLists.txt @@ -0,0 +1,115 @@ +include_directories() + +set(TEST_SRCS dict_test.cc +  logval_test.cc +  m_test.cc +  small_vector_test.cc +  stringlib_test.cc +  sv_test.cc +  ts.cc +  weights_test.cc) + +foreach(testSrc ${TEST_SRCS}) +  #Extract the filename without an extension (NAME_WE) +  get_filename_component(testName ${testSrc} NAME_WE) + +  #Add compile target +  set_source_files_properties(${testSrc} PROPERTIES COMPILE_FLAGS "-DBOOST_TEST_DYN_LINK -DTEST_DATA=\\\"test_data/\\\"") +  add_executable(${testName} ${testSrc}) + +  #link to Boost libraries AND your targets and dependencies +  target_link_libraries(${testName} utils ${Boost_LIBRARIES} ${ZLIB_LIBRARIES}) + +  #I like to move testing binaries into a testBin directory +  set_target_properties(${testName} PROPERTIES  +      RUNTIME_OUTPUT_DIRECTORY  ${CMAKE_CURRENT_SOURCE_DIR}) + +  #Finally add it to test execution -  +  #Notice the WORKING_DIRECTORY and COMMAND +  add_test(NAME ${testName} COMMAND ${CMAKE_CURRENT_SOURCE_DIR}/${testName}  +     WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR}) +endforeach(testSrc) + + +set(atools_SRCS atools.cc) +add_executable(atools ${atools_SRCS}) +target_link_libraries(atools utils ${Boost_LIBRARIES} ${ZLIB_LIBRARIES}) + +set(dedup_corpus_SRCS dedup_corpus.cc) +add_executable(dedup_corpus ${dedup_corpus_SRCS}) +target_link_libraries(dedup_corpus utils ${Boost_LIBRARIES} ${ZLIB_LIBRARIES}) + +set(utils_STAT_SRCS +    test_data +    alias_sampler.h +    alignment_io.h +    array2d.h +    b64featvector.h +    b64tools.h +    batched_append.h +    city.h +    citycrc.h +    corpus_tools.h +    dict.h +    exp_semiring.h +    fast_sparse_vector.h +    fdict.h +    feature_vector.h +    filelib.h +    gzstream.h +    hash.h +    have_64_bits.h +    indices_after.h +    kernel_string_subseq.h +    logval.h +    m.h +    maxent.h +    maxent.cpp +    murmur_hash3.h +    murmur_hash3.cc +    named_enum.h +    null_deleter.h +    null_traits.h +    perfect_hash.h +    prob.h +    sampler.h +    semiring.h +    show.h +    small_vector.h +    sparse_vector.h +    star.h +    static_utoa.h +    stringlib.h +    string_piece.hh +    tdict.h +    timing_stats.h +    utoa.h +    value_array.h +    verbose.h +    warning_compiler.h +    warning_pop.h +    warning_push.h +    weights.h +    wordid.h +    writer.h +    fast_lexical_cast.hpp +    intrusive_refcount.hpp +    alignment_io.cc +    b64featvector.cc +    b64tools.cc +    corpus_tools.cc +    dict.cc +    tdict.cc +    fdict.cc +    gzstream.cc +    filelib.cc +    stringlib.cc +    string_piece.cc +    sparse_vector.cc +    timing_stats.cc +    verbose.cc +    weights.cc) + +add_library(utils STATIC ${utils_STAT_SRCS}) + + diff --git a/utils/Makefile.am b/utils/Makefile.am deleted file mode 100644 index c858ac7e..00000000 --- a/utils/Makefile.am +++ /dev/null @@ -1,127 +0,0 @@ -bin_PROGRAMS = reconstruct_weights atools dedup_corpus - -noinst_PROGRAMS = \ -  ts \ -  phmt \ -  dict_test \ -  m_test \ -  weights_test \ -  logval_test \ -  small_vector_test \ -  stringlib_test \ -  sv_test - -TESTS = ts small_vector_test logval_test weights_test dict_test m_test sv_test stringlib_test - -noinst_LIBRARIES = libutils.a - -# EXTRA_DIST = test_data - -libutils_a_SOURCES = \ -  test_data \ -  alias_sampler.h \ -  alignment_io.h \ -  array2d.h \ -  b64featvector.h \ -  b64tools.h \ -  batched_append.h \ -  city.h \ -  citycrc.h \ -  corpus_tools.h \ -  dict.h \ -  exp_semiring.h \ -  fast_sparse_vector.h \ -  fdict.h \ -  feature_vector.h \ -  filelib.h \ -  gzstream.h \ -  hash.h \ -  have_64_bits.h \ -  indices_after.h \ -  kernel_string_subseq.h \ -  logval.h \ -  m.h \ -  maxent.h \ -  maxent.cpp \ -  murmur_hash3.h \ -  murmur_hash3.cc \ -  named_enum.h \ -  null_deleter.h \ -  null_traits.h \ -  perfect_hash.h \ -  prob.h \ -  sampler.h \ -  semiring.h \ -  show.h \ -  small_vector.h \ -  sparse_vector.h \ -  star.h \ -  static_utoa.h \ -  stringlib.h \ -  string_piece.hh \ -  tdict.h \ -  timing_stats.h \ -  utoa.h \ -  value_array.h \ -  verbose.h \ -  warning_compiler.h \ -  warning_pop.h \ -  warning_push.h \ -  weights.h \ -  wordid.h \ -  writer.h \ -  fast_lexical_cast.hpp \ -  intrusive_refcount.hpp \ -  alignment_io.cc \ -  b64featvector.cc \ -  b64tools.cc \ -  corpus_tools.cc \ -  dict.cc \ -  tdict.cc \ -  fdict.cc \ -  gzstream.cc \ -  filelib.cc \ -  stringlib.cc \ -  string_piece.cc \ -  sparse_vector.cc \ -  timing_stats.cc \ -  verbose.cc \ -  weights.cc - -if HAVE_CMPH -  libutils_a_SOURCES += perfect_hash.cc -endif - -reconstruct_weights_SOURCES = reconstruct_weights.cc -reconstruct_weights_LDADD = libutils.a -atools_SOURCES = atools.cc -atools_LDADD = libutils.a -atools_LDFLAGS = $(STATIC_FLAGS) - -dedup_corpus_SOURCES = dedup_corpus.cc -dedup_corpus_LDADD = libutils.a -dedup_corpus_LDFLAGS = $(STATIC_FLAGS) - -phmt_SOURCES = phmt.cc -phmt_LDADD = libutils.a $(BOOST_UNIT_TEST_FRAMEWORK_LDFLAGS) $(BOOST_UNIT_TEST_FRAMEWORK_LIBS) -ts_SOURCES = ts.cc -ts_LDADD = libutils.a $(BOOST_UNIT_TEST_FRAMEWORK_LDFLAGS) $(BOOST_UNIT_TEST_FRAMEWORK_LIBS) -m_test_SOURCES = m_test.cc -m_test_LDADD = libutils.a $(BOOST_UNIT_TEST_FRAMEWORK_LDFLAGS) $(BOOST_UNIT_TEST_FRAMEWORK_LIBS) -dict_test_SOURCES = dict_test.cc -dict_test_LDADD = libutils.a $(BOOST_UNIT_TEST_FRAMEWORK_LDFLAGS) $(BOOST_UNIT_TEST_FRAMEWORK_LIBS) -weights_test_SOURCES = weights_test.cc -weights_test_LDADD = libutils.a $(BOOST_UNIT_TEST_FRAMEWORK_LDFLAGS) $(BOOST_UNIT_TEST_FRAMEWORK_LIBS) -logval_test_SOURCES = logval_test.cc -logval_test_LDADD = libutils.a $(BOOST_UNIT_TEST_FRAMEWORK_LDFLAGS) $(BOOST_UNIT_TEST_FRAMEWORK_LIBS) -small_vector_test_SOURCES = small_vector_test.cc -small_vector_test_LDADD = libutils.a $(BOOST_UNIT_TEST_FRAMEWORK_LDFLAGS) $(BOOST_UNIT_TEST_FRAMEWORK_LIBS) -sv_test_SOURCES = sv_test.cc -sv_test_LDADD = libutils.a $(BOOST_UNIT_TEST_FRAMEWORK_LDFLAGS) $(BOOST_UNIT_TEST_FRAMEWORK_LIBS) -stringlib_test_SOURCES = stringlib_test.cc -stringlib_test_LDADD = libutils.a $(BOOST_UNIT_TEST_FRAMEWORK_LDFLAGS) $(BOOST_UNIT_TEST_FRAMEWORK_LIBS) - -################################################################ -# do NOT NOT NOT add any other -I includes NO NO NO NO NO ###### -AM_CPPFLAGS = -DBOOST_TEST_DYN_LINK -W -Wall -I. -I$(top_srcdir) -DTEST_DATA=\"$(top_srcdir)/utils/test_data\" -################################################################ diff --git a/utils/fast_sparse_vector.h b/utils/fast_sparse_vector.h index 1e0ab428..0697fc44 100644 --- a/utils/fast_sparse_vector.h +++ b/utils/fast_sparse_vector.h @@ -20,9 +20,7 @@  #endif  #include <boost/static_assert.hpp> -#if HAVE_BOOST_ARCHIVE_TEXT_OARCHIVE_HPP  #include <boost/serialization/map.hpp> -#endif  #include "fdict.h" @@ -471,7 +469,6 @@ class FastSparseVector {    unsigned char local_size_;    bool is_remote_; -#if HAVE_BOOST_ARCHIVE_TEXT_OARCHIVE_HPP   private:    friend class boost::serialization::access;    template<class Archive> @@ -502,12 +499,9 @@ class FastSparseVector {      }    }    BOOST_SERIALIZATION_SPLIT_MEMBER() -#endif  }; -#if HAVE_BOOST_ARCHIVE_TEXT_OARCHIVE_HPP  BOOST_CLASS_TRACKING(FastSparseVector<double>,track_never) -#endif  template <typename T>  const FastSparseVector<T> operator+(const FastSparseVector<T>& x, const FastSparseVector<T>& y) { diff --git a/utils/gzstream.cc b/utils/gzstream.cc index 88cd1bd2..dbfa2f53 100644 --- a/utils/gzstream.cc +++ b/utils/gzstream.cc @@ -26,7 +26,7 @@  // Standard C++ Library".  // ============================================================================ -#include <gzstream.h> +#include "gzstream.h"  #include <iostream>  #include <cstring>  // for memcpy  #include <stdexcept> diff --git a/word-aligner/CMakeLists.txt b/word-aligner/CMakeLists.txt new file mode 100644 index 00000000..baf85b31 --- /dev/null +++ b/word-aligner/CMakeLists.txt @@ -0,0 +1,10 @@ +INCLUDE_DIRECTORIES(${CMAKE_CURRENT_SOURCE_DIR}/../utils) + +set(fast_align_SRCS +    fast_align.cc +    ttables.cc +    da.h +    ttables.h) +add_executable(fast_align ${fast_align_SRCS}) +target_link_libraries(fast_align utils ${Boost_LIBRARIES} z) + diff --git a/word-aligner/Makefile.am b/word-aligner/Makefile.am deleted file mode 100644 index 071e4977..00000000 --- a/word-aligner/Makefile.am +++ /dev/null @@ -1,12 +0,0 @@ -bin_PROGRAMS = fast_align binderiv - -fast_align_SOURCES = fast_align.cc ttables.cc da.h ttables.h -fast_align_LDADD = ../utils/libutils.a -fast_align_LDFLAGS = $(STATIC_FLAGS) - -binderiv_SOURCES = binderiv.cc -binderiv_LDADD = ../utils/libutils.a - -EXTRA_DIST = aligner.pl ortho-norm support makefiles stemmers - -AM_CPPFLAGS = -W -Wall -I$(top_srcdir) -I$(top_srcdir)/utils -I$(top_srcdir)/training  | 
