few small fixes of alignment tools, add new orthographic similarity feature for word aligner, final naming of directories, libraries in cdec

1 files changed, 0 insertions, 264 deletions

diff --git a/src/sparse_vector.h b/src/sparse_vector.h
deleted file mode 100644
index 6a8c9bf4..00000000
--- a/src/sparse_vector.h
+++ /dev/null
@@ -1,264 +0,0 @@
-#ifndef _SPARSE_VECTOR_H_
-#define _SPARSE_VECTOR_H_
-
-// this is a modified version of code originally written
-// by Phil Blunsom
-
-#include <iostream>
-#include <map>
-#include <vector>
-#include <valarray>
-
-#include "fdict.h"
-
-template <typename T>
-class SparseVector {
-public:
-    SparseVector() {}
-
-    const T operator[](int index) const {
-      typename std::map<int, T>::const_iterator found = _values.find(index);
-      if (found == _values.end())
-        return T(0);
-      else
-        return found->second;
-    }
-
-    void set_value(int index, const T &value) {
-        _values[index] = value;
-    }
-
-    void add_value(int index, const T &value) {
-        _values[index] += value;
-    }
-
-    T value(int index) const {
-        typename std::map<int, T>::const_iterator found = _values.find(index);
-        if (found != _values.end())
-            return found->second;
-        else
-            return T(0);
-    }
-
-    void store(std::valarray<T>* target) const {
-      (*target) *= 0;
-      for (typename std::map<int, T>::const_iterator 
-              it = _values.begin(); it != _values.end(); ++it) {
-        if (it->first >= target->size()) break;
-        (*target)[it->first] = it->second;
-      }
-    }
-
-    int max_index() const {
-        if (_values.empty()) return 0;
-        typename std::map<int, T>::const_iterator found =_values.end();
-        --found;
-        return found->first;
-    }
-
-    // dot product with a unit vector of the same length
-    // as the sparse vector
-    T dot() const {
-        T sum = 0;
-        for (typename std::map<int, T>::const_iterator 
-                it = _values.begin(); it != _values.end(); ++it)
-            sum += it->second;
-        return sum;
-    }
-
-    template<typename S>
-    S dot(const SparseVector<S> &vec) const {
-        S sum = 0;
-        for (typename std::map<int, T>::const_iterator 
-                it = _values.begin(); it != _values.end(); ++it)
-        {
-            typename std::map<int, T>::const_iterator 
-                found = vec._values.find(it->first);
-            if (found != vec._values.end())
-                sum += it->second * found->second;
-        }
-        return sum;
-    }
-    
-    template<typename S>
-    S dot(const std::vector<S> &vec) const {
-        S sum = 0;
-        for (typename std::map<int, T>::const_iterator 
-                it = _values.begin(); it != _values.end(); ++it)
-        {
-            if (it->first < static_cast<int>(vec.size()))
-                sum += it->second * vec[it->first];
-        }
-        return sum;
-    }
-
-    template<typename S>
-    S dot(const S *vec) const {
-        // this is not range checked!
-        S sum = 0;
-        for (typename std::map<int, T>::const_iterator 
-                it = _values.begin(); it != _values.end(); ++it)
-            sum += it->second * vec[it->first];
-        std::cout << "dot(*vec) " << sum << std::endl;
-        return sum;
-    }
-
-    T l1norm() const {
-      T sum = 0;
-      for (typename std::map<int, T>::const_iterator 
-              it = _values.begin(); it != _values.end(); ++it)
-        sum += fabs(it->second);
-      return sum;
-    }
-    
-    T l2norm() const {
-      T sum = 0;
-      for (typename std::map<int, T>::const_iterator 
-              it = _values.begin(); it != _values.end(); ++it)
-        sum += it->second * it->second;
-      return sqrt(sum);
-    }
-    
-    SparseVector<T> &operator+=(const SparseVector<T> &other) {
-        for (typename std::map<int, T>::const_iterator 
-                it = other._values.begin(); it != other._values.end(); ++it)
-        {
-            T v = (_values[it->first] += it->second);
-            if (v == 0)
-                _values.erase(it->first);
-        }
-        return *this;
-    }
-
-    SparseVector<T> &operator-=(const SparseVector<T> &other) {
-        for (typename std::map<int, T>::const_iterator 
-                it = other._values.begin(); it != other._values.end(); ++it)
-        {
-            T v = (_values[it->first] -= it->second);
-            if (v == 0)
-                _values.erase(it->first);
-        }
-        return *this;
-    }
-
-    SparseVector<T> &operator-=(const double &x) {
-        for (typename std::map<int, T>::iterator 
-                it = _values.begin(); it != _values.end(); ++it)
-            it->second -= x;
-        return *this;
-    }
-
-    SparseVector<T> &operator+=(const double &x) {
-        for (typename std::map<int, T>::iterator 
-                it = _values.begin(); it != _values.end(); ++it)
-            it->second += x;
-        return *this;
-    }
-
-    SparseVector<T> &operator/=(const double &x) {
-        for (typename std::map<int, T>::iterator 
-                it = _values.begin(); it != _values.end(); ++it)
-            it->second /= x;
-        return *this;
-    }
-
-    SparseVector<T> &operator*=(const T& x) {
-        for (typename std::map<int, T>::iterator 
-                it = _values.begin(); it != _values.end(); ++it)
-            it->second *= x;
-        return *this;
-    }
-
-    SparseVector<T> operator+(const double &x) const {
-        SparseVector<T> result = *this;
-        return result += x;
-    }
-
-    SparseVector<T> operator-(const double &x) const {
-        SparseVector<T> result = *this;
-        return result -= x;
-    }
-
-    SparseVector<T> operator/(const double &x) const {
-        SparseVector<T> result = *this;
-        return result /= x;
-    }
-
-    std::ostream &operator<<(std::ostream &out) const {
-        for (typename std::map<int, T>::const_iterator 
-                it = _values.begin(); it != _values.end(); ++it)
-            out << (it == _values.begin() ? "" : ";")
-	        << FD::Convert(it->first) << '=' << it->second;
-        return out;
-    }
-
-    bool operator<(const SparseVector<T> &other) const {
-        typename std::map<int, T>::const_iterator it = _values.begin();
-        typename std::map<int, T>::const_iterator other_it = other._values.begin();
-
-        for (; it != _values.end() && other_it != other._values.end(); ++it, ++other_it)
-        {
-            if (it->first < other_it->first) return true;
-            if (it->first > other_it->first) return false;
-            if (it->second < other_it->second) return true;
-            if (it->second > other_it->second) return false;
-        }
-        return _values.size() < other._values.size();
-    }
-
-    int num_active() const { return _values.size(); }
-    bool empty() const { return _values.empty(); }
-
-    typedef typename std::map<int, T>::const_iterator const_iterator;
-    const_iterator begin() const { return _values.begin(); }
-    const_iterator end() const { return _values.end(); }
-
-    void clear() {
-        _values.clear();
-    }
-
-    void swap(SparseVector<T>& other) {
-      _values.swap(other._values);
-    }
-
-private:
-    std::map<int, T> _values;
-};
-
-template <typename T>
-SparseVector<T> operator+(const SparseVector<T>& a, const SparseVector<T>& b) {
-  SparseVector<T> result = a;
-  return result += b;
-}
-
-template <typename T>
-SparseVector<T> operator*(const SparseVector<T>& a, const double& b) {
-  SparseVector<T> result = a;
-  return result *= b;
-}
-
-template <typename T>
-SparseVector<T> operator*(const SparseVector<T>& a, const T& b) {
-  SparseVector<T> result = a;
-  return result *= b;
-}
-
-template <typename T>
-SparseVector<T> operator*(const double& a, const SparseVector<T>& b) {
-  SparseVector<T> result = b;
-  return result *= a;
-}
-
-template <typename T>
-std::ostream &operator<<(std::ostream &out, const SparseVector<T> &vec)
-{
-    return vec.operator<<(out);
-}
-
-namespace B64 {
-  void Encode(double objective, const SparseVector<double>& v, std::ostream* out);
-  // returns false if failed to decode
-  bool Decode(double* objective, SparseVector<double>* v, const char* data, size_t size);
-}
-
-#endif