cdec cleanup, remove bayesian stuff, parsing stuff

1 files changed, 0 insertions, 275 deletions

diff --git a/gi/pyp-topics/src/workers.hh b/gi/pyp-topics/src/workers.hh
deleted file mode 100644
index 95b18947..00000000
--- a/gi/pyp-topics/src/workers.hh
+++ /dev/null
@@ -1,275 +0,0 @@
-/**
-  Basic thread-pool tools using Boost.Thread.
-  (Jan Botha, 7/2010)
-
-  --Simple usage--
-  Use SimpleWorker.
-    Example, call a function that returns an int in a new thread:
-    typedef boost::function<int()> JobType;
-    JobType job = boost::bind(funcname);
-      //or boost::bind(&class::funcname, this) for a member function
-    SimpleWorker<JobType, int> worker(job);
-    int result = worker.getResult(); //blocks until result is ready
-
-  --Extended usage--
-  Use WorkerPool, which uses Queuemt (a synchronized queue) and Worker.
-  Example:
-    (same context and typedef
-    WorkerPool<JobType, int> pool(num_threads);
-    JobType job = ...
-    pool.addJob(job);
-    ...
-    pool.get_result(); //blocks until all workers are done, returns the some of their results.  
-    
-    Jobs added to a WorkerPool need to be the same type. A WorkerPool instance should not be reused (e.g. adding jobs) after calling get_result(). 
-*/
-
-#ifndef WORKERS_HH
-#define WORKERS_HH
-
-#include <iostream>
-#include <boost/bind.hpp>
-#include <boost/function.hpp>
-#include <queue>
-#include <boost/ptr_container/ptr_vector.hpp>
-#include <boost/thread/thread.hpp>
-#include <boost/thread/mutex.hpp>
-#include <boost/thread/shared_mutex.hpp>
-#include <boost/thread/future.hpp>
-#include <boost/thread/condition.hpp>
-
-#include <boost/date_time/posix_time/posix_time_types.hpp>
-#include "timing.h"
-
-/** Implements a synchronized queue*/
-template<typename J>
-class Queuemt
-{
-
-public:
-    boost::condition_variable_any cond;
-    const bool& running;
-
-    Queuemt() { }
-    Queuemt(const bool& running) : running(running), maxsize(0), qsize(0) 
-    { 
-    }
-
-    ~Queuemt() { 
-     }
-
-    J pop()
-    {
-        J job;
-        {
-            boost::unique_lock<boost::shared_mutex> qlock(q_mutex);
-            while (running && qsize == 0)
-                cond.wait(qlock);
-
-            if (qsize > 0)
-            {
-                job = q.front();
-                q.pop();
-                --qsize;      
-            }
-        }
-        if (job)
-            cond.notify_one();
-        return job;
-
-    }
-
-    void push(J job)
-    {
-        {
-            boost::unique_lock<boost::shared_mutex> lock(q_mutex);
-            q.push(job);
-            ++qsize;
-        }
-        if (qsize > maxsize)
-            maxsize = qsize;
-        
-        cond.notify_one();
-    }
-
-    int getMaxsize()
-    {
-        return maxsize;
-    }
-
-    int size()
-    {
-        return qsize;
-    }
-
-private:
-    boost::shared_mutex q_mutex;
-    std::queue<J> q;
-    int maxsize;
-    volatile int qsize;
-};
-
-
-template<typename J, typename R>
-class Worker
-{
-typedef boost::packaged_task<R> PackagedTask;
-public:
-    Worker(Queuemt<J>& queue, int id, int num_workers) :  
-      q(queue), tasktime(0.0), id(id), num_workers(num_workers)
-    {
-        PackagedTask task(boost::bind(&Worker<J, R>::run, this));
-        future = task.get_future();
-        boost::thread t(boost::move(task));
-    }
-
-    R run() //this is called upon thread creation
-    {
-        R wresult = 0;
-        while (isRunning())
-        {
-            J job = q.pop();
-
-            if (job)
-            {
-                timer.Reset();
-                wresult += job();
-                tasktime += timer.Elapsed();
-            }
-        }
-        return wresult;
-    }
-
-    R getResult()
-    {
-        if (!future.is_ready())
-            future.wait();
-        assert(future.is_ready());
-        return future.get();
-    }
-
-    double getTaskTime()
-    {
-        return tasktime;
-    }
-
-private:
-
-    Queuemt<J>& q;
-
-    boost::unique_future<R> future;
-
-    bool isRunning()
-    {
-        return q.running || q.size() > 0;
-    }
-    
-    Timer timer;
-    double tasktime;
-    int id;
-    int num_workers;
-};
-
-template<typename J, typename R>
-class WorkerPool
-{
-typedef boost::packaged_task<R> PackagedTask;
-typedef Worker<J,R> WJR;
-typedef boost::ptr_vector<WJR> WorkerVector;
-public:
-
-    WorkerPool(int num_workers)
-    {
-        q.reset(new Queuemt<J>(running));
-        running = true;
-        for (int i = 0; i < num_workers; ++i)
-            workers.push_back( new Worker<J, R>(*q, i, num_workers) );
-    }
-
-    ~WorkerPool()
-    {
-    }
-
-    R get_result()
-    {
-        running = false;
-        q->cond.notify_all();
-        R tmp = 0;
-        double tasktime = 0.0;
-        for (typename WorkerVector::iterator it = workers.begin(); it != workers.end(); it++)
-        {
-            R res = it->getResult();
-            tmp += res;
-            //std::cerr << "tasktime: " << it->getTaskTime() << std::endl; 
-            tasktime += it->getTaskTime();
-        }
-//        std::cerr << " maxQ = " << q->getMaxsize() << std::endl;
-        return tmp;
-    }
-
-    void addJob(J job)
-    {
-        q->push(job);
-    }
-
-private:
-
-    WorkerVector workers;
-
-    boost::shared_ptr<Queuemt<J> > q;
-
-    bool running;
-};
-
-///////////////////
-template <typename J, typename R>
-class SimpleWorker
-{
-typedef boost::packaged_task<R> PackagedTask;
-public:
-    SimpleWorker(J& job) : job(job), tasktime(0.0)
-    {
-        PackagedTask task(boost::bind(&SimpleWorker<J, R>::run, this));
-        future = task.get_future();
-        boost::thread t(boost::move(task));
-    }
-
-    R run() //this is called upon thread creation
-    {
-        R wresult = 0;
-
-        assert(job);
-        timer.Reset();
-        wresult = job();
-        tasktime = timer.Elapsed();
-        std::cerr << tasktime << " s" << std::endl; 
-        return wresult;
-    }
-
-    R getResult()
-    {
-        if (!future.is_ready())
-            future.wait();
-        assert(future.is_ready());
-        return future.get();
-    }
-
-    double getTaskTime()
-    {
-        return tasktime;
-    }
-
-private:
-
-    J job;
-
-    boost::unique_future<R> future;
-
-    Timer timer;
-    double tasktime;
-
-};
-
-
-
-#endif