diff options
| author | Adam Lopez <alopez@cs.jhu.edu> | 2012-09-06 15:00:45 -0400 |
|---|---|---|
| committer | Adam Lopez <alopez@cs.jhu.edu> | 2012-09-06 15:00:45 -0400 |
| commit | 5d159b948ad71850bcb03d0882ea7183a3a59b7e (patch) | |
| tree | da1dc6bd0b98bf640da62ec52192131c0caaa0ad | |
| parent | 1cef9b6842fec7598a0a0571f69bf4caab8e4c91 (diff) | |
add FeatureContext.input_span
| -rw-r--r-- | python/src/sa/_sa.c | 9715 | ||||
| -rw-r--r-- | python/src/sa/rulefactory.pxi | 16 |
2 files changed, 4896 insertions, 4835 deletions
diff --git a/python/src/sa/_sa.c b/python/src/sa/_sa.c index 6b6f0ef9..5b47fe8a 100644 --- a/python/src/sa/_sa.c +++ b/python/src/sa/_sa.c @@ -1,4 +1,4 @@ -/* Generated by Cython 0.17 on Thu Sep 6 17:27:34 2012 */ +/* Generated by Cython 0.17 on Thu Sep 6 14:56:12 2012 */ #define PY_SSIZE_T_CLEAN #include "Python.h" @@ -409,7 +409,7 @@ struct __pyx_t_3_sa__Trie_Node; struct __pyx_t_3_sa_match_node; struct __pyx_t_3_sa_Matching; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":9 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":9 * from libc.string cimport memset, strcpy * * cdef struct _node: # <<<<<<<<<<<<<< @@ -423,7 +423,7 @@ struct __pyx_t_3_sa__node { int val; }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":30 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":30 * _init_lower_mask() * * cdef struct _BitSet: # <<<<<<<<<<<<<< @@ -437,7 +437,7 @@ struct __pyx_t_3_sa__BitSet { int size; }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":168 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":168 * return result * * cdef struct _VEB: # <<<<<<<<<<<<<< @@ -454,7 +454,7 @@ struct __pyx_t_3_sa__VEB { void **bottom; }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":10 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":10 * cdef struct _Trie_Node # forward decl * * cdef struct _Trie_Edge: # <<<<<<<<<<<<<< @@ -468,7 +468,7 @@ struct __pyx_t_3_sa__Trie_Edge { struct __pyx_t_3_sa__Trie_Edge *smaller; }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":8 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":8 * from libc.string cimport memset, memcpy * * cdef struct _Trie_Node # forward decl # <<<<<<<<<<<<<< @@ -481,7 +481,7 @@ struct __pyx_t_3_sa__Trie_Node { int arr_len; }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":65 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":66 * * # linked list structure for storing matches in BaselineRuleFactory * cdef struct match_node: # <<<<<<<<<<<<<< @@ -493,7 +493,7 @@ struct __pyx_t_3_sa_match_node { struct __pyx_t_3_sa_match_node *next; }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":161 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":162 * * # struct used to encapsulate a single matching * cdef struct Matching: # <<<<<<<<<<<<<< @@ -508,7 +508,7 @@ struct __pyx_t_3_sa_Matching { int size; }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":217 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":218 * * * cdef class HieroCachingRuleFactory: # <<<<<<<<<<<<<< @@ -557,7 +557,7 @@ struct __pyx_obj_3_sa_HieroCachingRuleFactory { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":115 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":115 * for arc in node for node in lattice) * * def decode_sentence(lattice): # <<<<<<<<<<<<<< @@ -569,7 +569,7 @@ struct __pyx_obj_3_sa___pyx_scope_struct_9_decode_sentence { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":36 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":36 * logger.info("LCP array completed") * * def compute_stats(self, int max_n): # <<<<<<<<<<<<<< @@ -600,7 +600,7 @@ struct __pyx_obj_3_sa___pyx_scope_struct_3_compute_stats { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":21 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":21 * * def __str__(self): * return ' '.join('%s=%s' % feat for feat in self) # <<<<<<<<<<<<<< @@ -634,7 +634,7 @@ struct __pyx_obj_3_sa_IntList { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":340 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":340 * * * cdef class VEBIterator: # <<<<<<<<<<<<<< @@ -648,7 +648,7 @@ struct __pyx_obj_3_sa_VEBIterator { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":47 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":47 * * * cdef class BiLex: # <<<<<<<<<<<<<< @@ -669,7 +669,7 @@ struct __pyx_obj_3_sa_BiLex { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":354 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":354 * * * cdef class VEB: # <<<<<<<<<<<<<< @@ -683,7 +683,7 @@ struct __pyx_obj_3_sa_VEB { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":5 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":5 * as k most frequent n-grams""" * * cdef class LCP: # <<<<<<<<<<<<<< @@ -697,7 +697,7 @@ struct __pyx_obj_3_sa_LCP { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":9 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":9 * from libc.string cimport memset, strcpy * * cdef class DataArray: # <<<<<<<<<<<<<< @@ -716,7 +716,7 @@ struct __pyx_obj_3_sa_DataArray { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":100 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":100 * * * cdef class BitSetIterator: # <<<<<<<<<<<<<< @@ -730,7 +730,7 @@ struct __pyx_obj_3_sa_BitSetIterator { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":190 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":190 * return ' ||| '.join(fields) * * def alignments(self): # <<<<<<<<<<<<<< @@ -747,7 +747,7 @@ struct __pyx_obj_3_sa___pyx_scope_struct_14_alignments { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":188 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":188 * * * cdef class Precomputation: # <<<<<<<<<<<<<< @@ -768,7 +768,7 @@ struct __pyx_obj_3_sa_Precomputation { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":6 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":6 * from libc.stdio cimport FILE, fclose, fopen * * cdef class SuffixArray: # <<<<<<<<<<<<<< @@ -784,7 +784,7 @@ struct __pyx_obj_3_sa_SuffixArray { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":7 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":7 * cdef int INDEX_MASK = (1<<INDEX_SHIFT)-1 * * cdef class Alphabet: # <<<<<<<<<<<<<< @@ -820,7 +820,7 @@ struct __pyx_obj_3_sa_Rule { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":109 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":109 * def make_lattice(words): * word_ids = (sym_fromstring(word, True) for word in words) * return tuple(((word, None, 1), ) for word in word_ids) # <<<<<<<<<<<<<< @@ -837,7 +837,7 @@ struct __pyx_obj_3_sa___pyx_scope_struct_6_genexpr { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":74 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":74 * def read_bitext(self, char* filename, int side): * with gzip_or_text(filename) as fp: * data = (line.split(' ||| ')[side] for line in fp) # <<<<<<<<<<<<<< @@ -853,14 +853,6 @@ struct __pyx_obj_3_sa___pyx_scope_struct_2_genexpr { PyObject *(*__pyx_t_2)(PyObject *); }; - -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":73 - * # in the suffix array; if discontiguous, it is the set of - * # actual locations (packed into an array) - * cdef class PhraseLocation: # <<<<<<<<<<<<<< - * cdef int sa_low - * cdef int sa_high - */ struct __pyx_obj_3_sa_PhraseLocation { PyObject_HEAD struct __pyx_vtabstruct_3_sa_PhraseLocation *__pyx_vtab; @@ -873,7 +865,7 @@ struct __pyx_obj_3_sa_PhraseLocation { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":15 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":15 * self.values.append(value) * * def __iter__(self): # <<<<<<<<<<<<<< @@ -889,7 +881,7 @@ struct __pyx_obj_3_sa___pyx_scope_struct_16___iter__ { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":72 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":72 * self.read_text_data(fp) * * def read_bitext(self, char* filename, int side): # <<<<<<<<<<<<<< @@ -917,7 +909,7 @@ struct __pyx_obj_3_sa_FeatureVector { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":111 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":111 * return tuple(((word, None, 1), ) for word in word_ids) * * def decode_lattice(lattice): # <<<<<<<<<<<<<< @@ -930,7 +922,7 @@ struct __pyx_obj_3_sa___pyx_scope_struct_7_decode_lattice { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":23 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":23 * return ' '.join('%s=%s' % feat for feat in self) * * cdef class Scorer: # <<<<<<<<<<<<<< @@ -944,7 +936,7 @@ struct __pyx_obj_3_sa_Scorer { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":8 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":8 * # May need to revisit if things get really tight, though. * * cdef class Alignment: # <<<<<<<<<<<<<< @@ -959,7 +951,7 @@ struct __pyx_obj_3_sa_Alignment { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":118 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":118 * # (entirely C-implemented) _BitSet struct. * # Very slow; use only for debugging * cdef class BitSet: # <<<<<<<<<<<<<< @@ -972,7 +964,7 @@ struct __pyx_obj_3_sa_BitSet { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":95 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":96 * * * cdef class Sampler: # <<<<<<<<<<<<<< @@ -986,7 +978,7 @@ struct __pyx_obj_3_sa_Sampler { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/str_map.pxi":8 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/str_map.pxi":8 * char* stringmap_word(StrMap *vocab, int i) * * cdef class StringMap: # <<<<<<<<<<<<<< @@ -1000,7 +992,7 @@ struct __pyx_obj_3_sa_StringMap { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":20 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":20 * yield (FD.word(self.names[i]), self.values[i]) * * def __str__(self): # <<<<<<<<<<<<<< @@ -1013,7 +1005,7 @@ struct __pyx_obj_3_sa___pyx_scope_struct_17___str__ { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":35 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":36 * cdef int EPSILON = sym_fromstring('*EPS*', True) * * cdef class TrieNode: # <<<<<<<<<<<<<< @@ -1026,7 +1018,7 @@ struct __pyx_obj_3_sa_TrieNode { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":41 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":42 * self.children = {} * * cdef class ExtendedTrieNode(TrieNode): # <<<<<<<<<<<<<< @@ -1041,7 +1033,7 @@ struct __pyx_obj_3_sa_ExtendedTrieNode { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":109 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":109 * trie_node_to_map(edge.node, result, prefix, include_zeros) * * cdef class TrieMap: # <<<<<<<<<<<<<< @@ -1056,7 +1048,7 @@ struct __pyx_obj_3_sa_TrieMap { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":112 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":112 * * def decode_lattice(lattice): * return tuple((sym_tostring(sym), weight, dist) for (sym, weight, dist) in arc # <<<<<<<<<<<<<< @@ -1083,7 +1075,7 @@ struct __pyx_obj_3_sa___pyx_scope_struct_8_genexpr { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":107 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":107 * return ALPHABET.fromstring(string, terminal) * * def make_lattice(words): # <<<<<<<<<<<<<< @@ -1097,7 +1089,7 @@ struct __pyx_obj_3_sa___pyx_scope_struct_4_make_lattice { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":183 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":183 * return self.f.arity() * * def __str__(self): # <<<<<<<<<<<<<< @@ -1110,7 +1102,7 @@ struct __pyx_obj_3_sa___pyx_scope_struct_12___str__ { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":938 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":939 * return sorted(result); * * def input(self, fwords, meta): # <<<<<<<<<<<<<< @@ -1143,6 +1135,7 @@ struct __pyx_obj_3_sa___pyx_scope_struct_15_input { struct __pyx_obj_3_sa_Phrase *__pyx_v_hiero_phrase; long __pyx_v_hit; int __pyx_v_i; + PyObject *__pyx_v_input_match; PyObject *__pyx_v_is_shadow_path; int __pyx_v_j; int __pyx_v_k; @@ -1195,7 +1188,7 @@ struct __pyx_obj_3_sa___pyx_scope_struct_15_input { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":187 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":187 * fields = [sym_tostring(self.lhs), str(self.f), str(self.e), str(self.scores)] * if self.word_alignments is not None: * fields.append(' '.join('%d-%d' % a for a in self.alignments())) # <<<<<<<<<<<<<< @@ -1229,7 +1222,7 @@ struct __pyx_obj_3_sa_Phrase { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":81 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":81 * free(self.arr) * * def __iter__(self): # <<<<<<<<<<<<<< @@ -1245,7 +1238,7 @@ struct __pyx_obj_3_sa___pyx_scope_struct____iter__ { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":52 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":53 * * * cdef class TrieTable: # <<<<<<<<<<<<<< @@ -1260,7 +1253,7 @@ struct __pyx_obj_3_sa_TrieTable { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":141 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":141 * return self.syms[i] * * def __iter__(self): # <<<<<<<<<<<<<< @@ -1275,7 +1268,7 @@ struct __pyx_obj_3_sa___pyx_scope_struct_11___iter__ { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":108 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":108 * * def make_lattice(words): * word_ids = (sym_fromstring(word, True) for word in words) # <<<<<<<<<<<<<< @@ -1292,7 +1285,7 @@ struct __pyx_obj_3_sa___pyx_scope_struct_5_genexpr { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":116 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":116 * * def decode_sentence(lattice): * return tuple(sym_tostring(sym) for ((sym, _, _),) in lattice) # <<<<<<<<<<<<<< @@ -1326,7 +1319,7 @@ struct __pyx_obj_3_sa_FloatList { -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/str_map.pxi":8 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/str_map.pxi":8 * char* stringmap_word(StrMap *vocab, int i) * * cdef class StringMap: # <<<<<<<<<<<<<< @@ -1341,7 +1334,7 @@ struct __pyx_vtabstruct_3_sa_StringMap { static struct __pyx_vtabstruct_3_sa_StringMap *__pyx_vtabptr_3_sa_StringMap; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":9 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":9 * from libc.string cimport memset, strcpy * * cdef class DataArray: # <<<<<<<<<<<<<< @@ -1356,7 +1349,7 @@ struct __pyx_vtabstruct_3_sa_DataArray { static struct __pyx_vtabstruct_3_sa_DataArray *__pyx_vtabptr_3_sa_DataArray; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":109 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":109 * trie_node_to_map(edge.node, result, prefix, include_zeros) * * cdef class TrieMap: # <<<<<<<<<<<<<< @@ -1371,7 +1364,7 @@ struct __pyx_vtabstruct_3_sa_TrieMap { static struct __pyx_vtabstruct_3_sa_TrieMap *__pyx_vtabptr_3_sa_TrieMap; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":8 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":8 * # May need to revisit if things get really tight, though. * * cdef class Alignment: # <<<<<<<<<<<<<< @@ -1387,7 +1380,7 @@ struct __pyx_vtabstruct_3_sa_Alignment { static struct __pyx_vtabstruct_3_sa_Alignment *__pyx_vtabptr_3_sa_Alignment; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":47 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":47 * * * cdef class BiLex: # <<<<<<<<<<<<<< @@ -1406,7 +1399,7 @@ struct __pyx_vtabstruct_3_sa_BiLex { static struct __pyx_vtabstruct_3_sa_BiLex *__pyx_vtabptr_3_sa_BiLex; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":9 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":9 * from libc.string cimport memset, memcpy * * cdef class IntList: # <<<<<<<<<<<<<< @@ -1426,7 +1419,7 @@ struct __pyx_vtabstruct_3_sa_IntList { static struct __pyx_vtabstruct_3_sa_IntList *__pyx_vtabptr_3_sa_IntList; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":4 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":4 * from libc.string cimport strsep, strcpy, strlen * * cdef class Phrase: # <<<<<<<<<<<<<< @@ -1441,7 +1434,7 @@ struct __pyx_vtabstruct_3_sa_Phrase { static struct __pyx_vtabstruct_3_sa_Phrase *__pyx_vtabptr_3_sa_Phrase; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":73 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":74 * # in the suffix array; if discontiguous, it is the set of * # actual locations (packed into an array) * cdef class PhraseLocation: # <<<<<<<<<<<<<< @@ -1455,7 +1448,7 @@ struct __pyx_vtabstruct_3_sa_PhraseLocation { static struct __pyx_vtabstruct_3_sa_PhraseLocation *__pyx_vtabptr_3_sa_PhraseLocation; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":188 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":188 * * * cdef class Precomputation: # <<<<<<<<<<<<<< @@ -1470,7 +1463,7 @@ struct __pyx_vtabstruct_3_sa_Precomputation { static struct __pyx_vtabstruct_3_sa_Precomputation *__pyx_vtabptr_3_sa_Precomputation; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":23 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":23 * return ' '.join('%s=%s' % feat for feat in self) * * cdef class Scorer: # <<<<<<<<<<<<<< @@ -1484,7 +1477,7 @@ struct __pyx_vtabstruct_3_sa_Scorer { static struct __pyx_vtabstruct_3_sa_Scorer *__pyx_vtabptr_3_sa_Scorer; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":9 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":9 * from libc.string cimport memset, strcpy, strlen * * cdef class FloatList: # <<<<<<<<<<<<<< @@ -1500,7 +1493,7 @@ struct __pyx_vtabstruct_3_sa_FloatList { static struct __pyx_vtabstruct_3_sa_FloatList *__pyx_vtabptr_3_sa_FloatList; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":354 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":354 * * * cdef class VEB: # <<<<<<<<<<<<<< @@ -1516,7 +1509,7 @@ struct __pyx_vtabstruct_3_sa_VEB { static struct __pyx_vtabstruct_3_sa_VEB *__pyx_vtabptr_3_sa_VEB; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":7 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":7 * cdef int INDEX_MASK = (1<<INDEX_SHIFT)-1 * * cdef class Alphabet: # <<<<<<<<<<<<<< @@ -1539,7 +1532,7 @@ struct __pyx_vtabstruct_3_sa_Alphabet { static struct __pyx_vtabstruct_3_sa_Alphabet *__pyx_vtabptr_3_sa_Alphabet; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":217 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":218 * * * cdef class HieroCachingRuleFactory: # <<<<<<<<<<<<<< @@ -1567,7 +1560,7 @@ struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory { static struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *__pyx_vtabptr_3_sa_HieroCachingRuleFactory; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":6 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":6 * from libc.stdio cimport FILE, fclose, fopen * * cdef class SuffixArray: # <<<<<<<<<<<<<< @@ -2572,9 +2565,9 @@ static char __pyx_k_131[] = "Subphrase [%d, %d] failed integrity check"; static char __pyx_k_132[] = "Didn't extract anything from [%d, %d] -> [%d, %d]"; static char __pyx_k_133[] = "Unable to extract basic phrase"; static char __pyx_k_134[] = "%s=%s"; -static char __pyx_k_137[] = "/Users/vchahun/Sandbox/cdec/python/src/sa/_sa.pyx"; +static char __pyx_k_137[] = "/home/hltcoe/alopez/dev/cdec/python/src/sa/_sa.pyx"; static char __pyx_k_138[] = "cdec.sa"; -static char __pyx_k_142[] = "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi"; +static char __pyx_k_142[] = "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi"; static char __pyx_k_147[] = "*EPS*"; static char __pyx_k__gc[] = "gc"; static char __pyx_k__sa[] = "sa"; @@ -2723,6 +2716,7 @@ static char __pyx_k__collections[] = "collections"; static char __pyx_k__defaultdict[] = "defaultdict"; static char __pyx_k__from_binary[] = "from_binary"; static char __pyx_k__initial_len[] = "initial_len"; +static char __pyx_k__input_match[] = "input_match"; static char __pyx_k__next_states[] = "next_states"; static char __pyx_k__precomputed[] = "precomputed"; static char __pyx_k__read_binary[] = "read_binary"; @@ -2938,6 +2932,7 @@ static PyObject *__pyx_n_s__increment; static PyObject *__pyx_n_s__index; static PyObject *__pyx_n_s__info; static PyObject *__pyx_n_s__initial_len; +static PyObject *__pyx_n_s__input_match; static PyObject *__pyx_n_s__input_span; static PyObject *__pyx_n_s__insert; static PyObject *__pyx_n_s__isa; @@ -3419,7 +3414,7 @@ static int __pyx_pw_3_sa_9FloatList_1__cinit__(PyObject *__pyx_v_self, PyObject return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":11 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":11 * cdef class FloatList: * * def __cinit__(self, int size=0, int increment=1, int initial_len=0): # <<<<<<<<<<<<<< @@ -3433,7 +3428,7 @@ static int __pyx_pf_3_sa_9FloatList___cinit__(struct __pyx_obj_3_sa_FloatList *_ int __pyx_t_1; __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":12 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":12 * * def __cinit__(self, int size=0, int increment=1, int initial_len=0): * if initial_len > size: # <<<<<<<<<<<<<< @@ -3443,7 +3438,7 @@ static int __pyx_pf_3_sa_9FloatList___cinit__(struct __pyx_obj_3_sa_FloatList *_ __pyx_t_1 = (__pyx_v_initial_len > __pyx_v_size); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":13 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":13 * def __cinit__(self, int size=0, int increment=1, int initial_len=0): * if initial_len > size: * size = initial_len # <<<<<<<<<<<<<< @@ -3455,7 +3450,7 @@ static int __pyx_pf_3_sa_9FloatList___cinit__(struct __pyx_obj_3_sa_FloatList *_ } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":14 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":14 * if initial_len > size: * size = initial_len * self.size = size # <<<<<<<<<<<<<< @@ -3464,7 +3459,7 @@ static int __pyx_pf_3_sa_9FloatList___cinit__(struct __pyx_obj_3_sa_FloatList *_ */ __pyx_v_self->size = __pyx_v_size; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":15 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":15 * size = initial_len * self.size = size * self.increment = increment # <<<<<<<<<<<<<< @@ -3473,7 +3468,7 @@ static int __pyx_pf_3_sa_9FloatList___cinit__(struct __pyx_obj_3_sa_FloatList *_ */ __pyx_v_self->increment = __pyx_v_increment; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":16 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":16 * self.size = size * self.increment = increment * self.len = initial_len # <<<<<<<<<<<<<< @@ -3482,7 +3477,7 @@ static int __pyx_pf_3_sa_9FloatList___cinit__(struct __pyx_obj_3_sa_FloatList *_ */ __pyx_v_self->len = __pyx_v_initial_len; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":17 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":17 * self.increment = increment * self.len = initial_len * self.arr = <float*> malloc(size*sizeof(float)) # <<<<<<<<<<<<<< @@ -3491,7 +3486,7 @@ static int __pyx_pf_3_sa_9FloatList___cinit__(struct __pyx_obj_3_sa_FloatList *_ */ __pyx_v_self->arr = ((float *)malloc((__pyx_v_size * (sizeof(float))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":18 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":18 * self.len = initial_len * self.arr = <float*> malloc(size*sizeof(float)) * memset(self.arr, 0, initial_len*sizeof(float)) # <<<<<<<<<<<<<< @@ -3514,7 +3509,7 @@ static void __pyx_pw_3_sa_9FloatList_3__dealloc__(PyObject *__pyx_v_self) { __Pyx_RefNannyFinishContext(); } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":20 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":20 * memset(self.arr, 0, initial_len*sizeof(float)) * * def __dealloc__(self): # <<<<<<<<<<<<<< @@ -3526,7 +3521,7 @@ static void __pyx_pf_3_sa_9FloatList_2__dealloc__(struct __pyx_obj_3_sa_FloatLis __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("__dealloc__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":21 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":21 * * def __dealloc__(self): * free(self.arr) # <<<<<<<<<<<<<< @@ -3549,7 +3544,7 @@ static PyObject *__pyx_pw_3_sa_9FloatList_5__getitem__(PyObject *__pyx_v_self, P return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":23 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":23 * free(self.arr) * * def __getitem__(self, i): # <<<<<<<<<<<<<< @@ -3572,7 +3567,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_4__getitem__(struct __pyx_obj_3_sa_Flo int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__getitem__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":24 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":24 * * def __getitem__(self, i): * j = i # <<<<<<<<<<<<<< @@ -3582,7 +3577,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_4__getitem__(struct __pyx_obj_3_sa_Flo __Pyx_INCREF(__pyx_v_i); __pyx_v_j = __pyx_v_i; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":25 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":25 * def __getitem__(self, i): * j = i * if i<0: # <<<<<<<<<<<<<< @@ -3594,7 +3589,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_4__getitem__(struct __pyx_obj_3_sa_Flo __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":26 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":26 * j = i * if i<0: * j = self.len + i # <<<<<<<<<<<<<< @@ -3613,7 +3608,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_4__getitem__(struct __pyx_obj_3_sa_Flo } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":27 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":27 * if i<0: * j = self.len + i * if j<0 or j>=self.len: # <<<<<<<<<<<<<< @@ -3636,7 +3631,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_4__getitem__(struct __pyx_obj_3_sa_Flo } if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":28 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":28 * j = self.len + i * if j<0 or j>=self.len: * raise IndexError("Requested index %d of %d-length FloatList" % (i, self.len)) # <<<<<<<<<<<<<< @@ -3671,7 +3666,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_4__getitem__(struct __pyx_obj_3_sa_Flo } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":29 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":29 * if j<0 or j>=self.len: * raise IndexError("Requested index %d of %d-length FloatList" % (i, self.len)) * return self.arr[j] # <<<<<<<<<<<<<< @@ -3700,7 +3695,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_4__getitem__(struct __pyx_obj_3_sa_Flo return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":31 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":31 * return self.arr[j] * * cdef void set(self, int i, float v): # <<<<<<<<<<<<<< @@ -3722,7 +3717,7 @@ static void __pyx_f_3_sa_9FloatList_set(struct __pyx_obj_3_sa_FloatList *__pyx_v int __pyx_clineno = 0; __Pyx_RefNannySetupContext("set", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":32 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":32 * * cdef void set(self, int i, float v): * j = i # <<<<<<<<<<<<<< @@ -3731,7 +3726,7 @@ static void __pyx_f_3_sa_9FloatList_set(struct __pyx_obj_3_sa_FloatList *__pyx_v */ __pyx_v_j = __pyx_v_i; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":33 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":33 * cdef void set(self, int i, float v): * j = i * if i<0: # <<<<<<<<<<<<<< @@ -3741,7 +3736,7 @@ static void __pyx_f_3_sa_9FloatList_set(struct __pyx_obj_3_sa_FloatList *__pyx_v __pyx_t_1 = (__pyx_v_i < 0); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":34 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":34 * j = i * if i<0: * j = self.len + i # <<<<<<<<<<<<<< @@ -3753,7 +3748,7 @@ static void __pyx_f_3_sa_9FloatList_set(struct __pyx_obj_3_sa_FloatList *__pyx_v } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":35 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":35 * if i<0: * j = self.len + i * if j<0 or j>=self.len: # <<<<<<<<<<<<<< @@ -3769,7 +3764,7 @@ static void __pyx_f_3_sa_9FloatList_set(struct __pyx_obj_3_sa_FloatList *__pyx_v } if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":36 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":36 * j = self.len + i * if j<0 or j>=self.len: * raise IndexError("Requested index %d of %d-length FloatList" % (i, self.len)) # <<<<<<<<<<<<<< @@ -3806,7 +3801,7 @@ static void __pyx_f_3_sa_9FloatList_set(struct __pyx_obj_3_sa_FloatList *__pyx_v } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":37 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":37 * if j<0 or j>=self.len: * raise IndexError("Requested index %d of %d-length FloatList" % (i, self.len)) * self.arr[j] = v # <<<<<<<<<<<<<< @@ -3836,7 +3831,7 @@ static int __pyx_pw_3_sa_9FloatList_7__setitem__(PyObject *__pyx_v_self, PyObjec return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":39 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":39 * self.arr[j] = v * * def __setitem__(self, i, val): # <<<<<<<<<<<<<< @@ -3854,7 +3849,7 @@ static int __pyx_pf_3_sa_9FloatList_6__setitem__(struct __pyx_obj_3_sa_FloatList int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__setitem__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":40 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":40 * * def __setitem__(self, i, val): * self.set(i, val) # <<<<<<<<<<<<<< @@ -3886,7 +3881,7 @@ static Py_ssize_t __pyx_pw_3_sa_9FloatList_9__len__(PyObject *__pyx_v_self) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":42 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":42 * self.set(i, val) * * def __len__(self): # <<<<<<<<<<<<<< @@ -3899,7 +3894,7 @@ static Py_ssize_t __pyx_pf_3_sa_9FloatList_8__len__(struct __pyx_obj_3_sa_FloatL __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("__len__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":43 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":43 * * def __len__(self): * return self.len # <<<<<<<<<<<<<< @@ -3936,7 +3931,7 @@ static PyObject *__pyx_pw_3_sa_9FloatList_11append(PyObject *__pyx_v_self, PyObj return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":45 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":45 * return self.len * * def append(self, float val): # <<<<<<<<<<<<<< @@ -3950,7 +3945,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_10append(struct __pyx_obj_3_sa_FloatLi int __pyx_t_1; __Pyx_RefNannySetupContext("append", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":46 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":46 * * def append(self, float val): * if self.len == self.size: # <<<<<<<<<<<<<< @@ -3960,7 +3955,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_10append(struct __pyx_obj_3_sa_FloatLi __pyx_t_1 = (__pyx_v_self->len == __pyx_v_self->size); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":47 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":47 * def append(self, float val): * if self.len == self.size: * self.size = self.size + self.increment # <<<<<<<<<<<<<< @@ -3969,7 +3964,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_10append(struct __pyx_obj_3_sa_FloatLi */ __pyx_v_self->size = (__pyx_v_self->size + __pyx_v_self->increment); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":48 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":48 * if self.len == self.size: * self.size = self.size + self.increment * self.arr = <float*> realloc(self.arr, self.size*sizeof(float)) # <<<<<<<<<<<<<< @@ -3981,7 +3976,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_10append(struct __pyx_obj_3_sa_FloatLi } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":49 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":49 * self.size = self.size + self.increment * self.arr = <float*> realloc(self.arr, self.size*sizeof(float)) * self.arr[self.len] = val # <<<<<<<<<<<<<< @@ -3990,7 +3985,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_10append(struct __pyx_obj_3_sa_FloatLi */ (__pyx_v_self->arr[__pyx_v_self->len]) = __pyx_v_val; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":50 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":50 * self.arr = <float*> realloc(self.arr, self.size*sizeof(float)) * self.arr[self.len] = val * self.len = self.len + 1 # <<<<<<<<<<<<<< @@ -4005,7 +4000,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_10append(struct __pyx_obj_3_sa_FloatLi return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":52 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":52 * self.len = self.len + 1 * * cdef void write_handle(self, FILE* f): # <<<<<<<<<<<<<< @@ -4017,7 +4012,7 @@ static void __pyx_f_3_sa_9FloatList_write_handle(struct __pyx_obj_3_sa_FloatList __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("write_handle", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":53 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":53 * * cdef void write_handle(self, FILE* f): * fwrite(&(self.len), sizeof(float), 1, f) # <<<<<<<<<<<<<< @@ -4026,7 +4021,7 @@ static void __pyx_f_3_sa_9FloatList_write_handle(struct __pyx_obj_3_sa_FloatList */ fwrite((&__pyx_v_self->len), (sizeof(float)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":54 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":54 * cdef void write_handle(self, FILE* f): * fwrite(&(self.len), sizeof(float), 1, f) * fwrite(self.arr, sizeof(float), self.len, f) # <<<<<<<<<<<<<< @@ -4059,7 +4054,7 @@ static PyObject *__pyx_pw_3_sa_9FloatList_13write(PyObject *__pyx_v_self, PyObje return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":56 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":56 * fwrite(self.arr, sizeof(float), self.len, f) * * def write(self, char* filename): # <<<<<<<<<<<<<< @@ -4073,7 +4068,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_12write(struct __pyx_obj_3_sa_FloatLis __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("write", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":58 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":58 * def write(self, char* filename): * cdef FILE* f * f = fopen(filename, "w") # <<<<<<<<<<<<<< @@ -4082,7 +4077,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_12write(struct __pyx_obj_3_sa_FloatLis */ __pyx_v_f = fopen(__pyx_v_filename, __pyx_k__w); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":59 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":59 * cdef FILE* f * f = fopen(filename, "w") * self.write_handle(f) # <<<<<<<<<<<<<< @@ -4091,7 +4086,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_12write(struct __pyx_obj_3_sa_FloatLis */ ((struct __pyx_vtabstruct_3_sa_FloatList *)__pyx_v_self->__pyx_vtab)->write_handle(__pyx_v_self, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":60 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":60 * f = fopen(filename, "w") * self.write_handle(f) * fclose(f) # <<<<<<<<<<<<<< @@ -4106,7 +4101,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_12write(struct __pyx_obj_3_sa_FloatLis return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":62 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":62 * fclose(f) * * cdef void read_handle(self, FILE* f): # <<<<<<<<<<<<<< @@ -4118,7 +4113,7 @@ static void __pyx_f_3_sa_9FloatList_read_handle(struct __pyx_obj_3_sa_FloatList __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("read_handle", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":63 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":63 * * cdef void read_handle(self, FILE* f): * free(self.arr) # <<<<<<<<<<<<<< @@ -4127,7 +4122,7 @@ static void __pyx_f_3_sa_9FloatList_read_handle(struct __pyx_obj_3_sa_FloatList */ free(__pyx_v_self->arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":64 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":64 * cdef void read_handle(self, FILE* f): * free(self.arr) * fread(&(self.len), sizeof(float), 1, f) # <<<<<<<<<<<<<< @@ -4136,7 +4131,7 @@ static void __pyx_f_3_sa_9FloatList_read_handle(struct __pyx_obj_3_sa_FloatList */ fread((&__pyx_v_self->len), (sizeof(float)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":65 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":65 * free(self.arr) * fread(&(self.len), sizeof(float), 1, f) * self.arr = <float*> malloc(self.len * sizeof(float)) # <<<<<<<<<<<<<< @@ -4145,7 +4140,7 @@ static void __pyx_f_3_sa_9FloatList_read_handle(struct __pyx_obj_3_sa_FloatList */ __pyx_v_self->arr = ((float *)malloc((__pyx_v_self->len * (sizeof(float))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":66 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":66 * fread(&(self.len), sizeof(float), 1, f) * self.arr = <float*> malloc(self.len * sizeof(float)) * self.size = self.len # <<<<<<<<<<<<<< @@ -4154,7 +4149,7 @@ static void __pyx_f_3_sa_9FloatList_read_handle(struct __pyx_obj_3_sa_FloatList */ __pyx_v_self->size = __pyx_v_self->len; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":67 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":67 * self.arr = <float*> malloc(self.len * sizeof(float)) * self.size = self.len * fread(self.arr, sizeof(float), self.len, f) # <<<<<<<<<<<<<< @@ -4187,7 +4182,7 @@ static PyObject *__pyx_pw_3_sa_9FloatList_15read(PyObject *__pyx_v_self, PyObjec return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":69 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":69 * fread(self.arr, sizeof(float), self.len, f) * * def read(self, char* filename): # <<<<<<<<<<<<<< @@ -4201,7 +4196,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_14read(struct __pyx_obj_3_sa_FloatList __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("read", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":71 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":71 * def read(self, char* filename): * cdef FILE* f * f = fopen(filename, "r") # <<<<<<<<<<<<<< @@ -4210,7 +4205,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_14read(struct __pyx_obj_3_sa_FloatList */ __pyx_v_f = fopen(__pyx_v_filename, __pyx_k__r); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":72 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":72 * cdef FILE* f * f = fopen(filename, "r") * self.read_handle(f) # <<<<<<<<<<<<<< @@ -4218,7 +4213,7 @@ static PyObject *__pyx_pf_3_sa_9FloatList_14read(struct __pyx_obj_3_sa_FloatList */ ((struct __pyx_vtabstruct_3_sa_FloatList *)__pyx_v_self->__pyx_vtab)->read_handle(__pyx_v_self, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/float_list.pxi":73 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/float_list.pxi":73 * f = fopen(filename, "r") * self.read_handle(f) * fclose(f) # <<<<<<<<<<<<<< @@ -4312,7 +4307,7 @@ static int __pyx_pw_3_sa_7IntList_1__cinit__(PyObject *__pyx_v_self, PyObject *_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":11 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":11 * cdef class IntList: * * def __cinit__(self, int size=0, int increment=1, int initial_len=0): # <<<<<<<<<<<<<< @@ -4326,7 +4321,7 @@ static int __pyx_pf_3_sa_7IntList___cinit__(struct __pyx_obj_3_sa_IntList *__pyx int __pyx_t_1; __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":12 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":12 * * def __cinit__(self, int size=0, int increment=1, int initial_len=0): * if initial_len > size: # <<<<<<<<<<<<<< @@ -4336,7 +4331,7 @@ static int __pyx_pf_3_sa_7IntList___cinit__(struct __pyx_obj_3_sa_IntList *__pyx __pyx_t_1 = (__pyx_v_initial_len > __pyx_v_size); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":13 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":13 * def __cinit__(self, int size=0, int increment=1, int initial_len=0): * if initial_len > size: * size = initial_len # <<<<<<<<<<<<<< @@ -4348,7 +4343,7 @@ static int __pyx_pf_3_sa_7IntList___cinit__(struct __pyx_obj_3_sa_IntList *__pyx } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":14 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":14 * if initial_len > size: * size = initial_len * self.size = size # <<<<<<<<<<<<<< @@ -4357,7 +4352,7 @@ static int __pyx_pf_3_sa_7IntList___cinit__(struct __pyx_obj_3_sa_IntList *__pyx */ __pyx_v_self->size = __pyx_v_size; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":15 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":15 * size = initial_len * self.size = size * self.increment = increment # <<<<<<<<<<<<<< @@ -4366,7 +4361,7 @@ static int __pyx_pf_3_sa_7IntList___cinit__(struct __pyx_obj_3_sa_IntList *__pyx */ __pyx_v_self->increment = __pyx_v_increment; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":16 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":16 * self.size = size * self.increment = increment * self.len = initial_len # <<<<<<<<<<<<<< @@ -4375,7 +4370,7 @@ static int __pyx_pf_3_sa_7IntList___cinit__(struct __pyx_obj_3_sa_IntList *__pyx */ __pyx_v_self->len = __pyx_v_initial_len; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":17 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":17 * self.increment = increment * self.len = initial_len * self.arr = <int*> malloc(size*sizeof(int)) # <<<<<<<<<<<<<< @@ -4384,7 +4379,7 @@ static int __pyx_pf_3_sa_7IntList___cinit__(struct __pyx_obj_3_sa_IntList *__pyx */ __pyx_v_self->arr = ((int *)malloc((__pyx_v_size * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":18 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":18 * self.len = initial_len * self.arr = <int*> malloc(size*sizeof(int)) * memset(self.arr, 0, initial_len*sizeof(int)) # <<<<<<<<<<<<<< @@ -4409,7 +4404,7 @@ static PyObject *__pyx_pw_3_sa_7IntList_3__str__(PyObject *__pyx_v_self) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":20 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":20 * memset(self.arr, 0, initial_len*sizeof(int)) * * def __str__(self): # <<<<<<<<<<<<<< @@ -4432,7 +4427,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_2__str__(struct __pyx_obj_3_sa_IntList * int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__str__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":22 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":22 * def __str__(self): * cdef unsigned i * ret = "IntList[" # <<<<<<<<<<<<<< @@ -4442,7 +4437,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_2__str__(struct __pyx_obj_3_sa_IntList * __Pyx_INCREF(((PyObject *)__pyx_kp_s_3)); __pyx_v_ret = ((PyObject *)__pyx_kp_s_3); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":23 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":23 * cdef unsigned i * ret = "IntList[" * for idx in range(self.size): # <<<<<<<<<<<<<< @@ -4453,7 +4448,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_2__str__(struct __pyx_obj_3_sa_IntList * for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_1; __pyx_t_2+=1) { __pyx_v_idx = __pyx_t_2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":24 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":24 * ret = "IntList[" * for idx in range(self.size): * if idx>0: # <<<<<<<<<<<<<< @@ -4463,7 +4458,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_2__str__(struct __pyx_obj_3_sa_IntList * __pyx_t_3 = (__pyx_v_idx > 0); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":25 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":25 * for idx in range(self.size): * if idx>0: * ret += "," # <<<<<<<<<<<<<< @@ -4479,7 +4474,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_2__str__(struct __pyx_obj_3_sa_IntList * } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":26 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":26 * if idx>0: * ret += "," * ret += str(self.arr[idx]) # <<<<<<<<<<<<<< @@ -4504,7 +4499,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_2__str__(struct __pyx_obj_3_sa_IntList * __pyx_t_5 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":27 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":27 * ret += "," * ret += str(self.arr[idx]) * ret += "]" # <<<<<<<<<<<<<< @@ -4517,7 +4512,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_2__str__(struct __pyx_obj_3_sa_IntList * __pyx_v_ret = __pyx_t_5; __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":28 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":28 * ret += str(self.arr[idx]) * ret += "]" * ret += "len=" # <<<<<<<<<<<<<< @@ -4530,7 +4525,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_2__str__(struct __pyx_obj_3_sa_IntList * __pyx_v_ret = __pyx_t_5; __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":29 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":29 * ret += "]" * ret += "len=" * ret += self.len # <<<<<<<<<<<<<< @@ -4546,7 +4541,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_2__str__(struct __pyx_obj_3_sa_IntList * __pyx_v_ret = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":30 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":30 * ret += "len=" * ret += self.len * return ret # <<<<<<<<<<<<<< @@ -4583,7 +4578,7 @@ static PyObject *__pyx_pw_3_sa_7IntList_5index(PyObject *__pyx_v_self, PyObject return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":32 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":32 * return ret * * def index(self, val): # <<<<<<<<<<<<<< @@ -4605,7 +4600,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_4index(struct __pyx_obj_3_sa_IntList *__ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("index", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":34 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":34 * def index(self, val): * cdef unsigned i * for i in range(self.len): # <<<<<<<<<<<<<< @@ -4616,7 +4611,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_4index(struct __pyx_obj_3_sa_IntList *__ for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_1; __pyx_t_2+=1) { __pyx_v_i = __pyx_t_2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":35 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":35 * cdef unsigned i * for i in range(self.len): * if self.arr[i] == val: # <<<<<<<<<<<<<< @@ -4631,7 +4626,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_4index(struct __pyx_obj_3_sa_IntList *__ __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":36 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":36 * for i in range(self.len): * if self.arr[i] == val: * return i # <<<<<<<<<<<<<< @@ -4649,7 +4644,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_4index(struct __pyx_obj_3_sa_IntList *__ __pyx_L5:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":37 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":37 * if self.arr[i] == val: * return i * return IndexError # <<<<<<<<<<<<<< @@ -4730,7 +4725,7 @@ static PyObject *__pyx_pw_3_sa_7IntList_7partition(PyObject *__pyx_v_self, PyObj return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":39 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":39 * return IndexError * * def partition(self,start,end): # <<<<<<<<<<<<<< @@ -4756,7 +4751,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList int __pyx_clineno = 0; __Pyx_RefNannySetupContext("partition", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":40 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":40 * * def partition(self,start,end): * pivot = self.arr[end] # <<<<<<<<<<<<<< @@ -4769,7 +4764,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList __pyx_v_pivot = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":41 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":41 * def partition(self,start,end): * pivot = self.arr[end] * bottom = start-1 # <<<<<<<<<<<<<< @@ -4781,7 +4776,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList __pyx_v_bottom = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":42 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":42 * pivot = self.arr[end] * bottom = start-1 * top = end # <<<<<<<<<<<<<< @@ -4791,7 +4786,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList __Pyx_INCREF(__pyx_v_end); __pyx_v_top = __pyx_v_end; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":43 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":43 * bottom = start-1 * top = end * done = 0 # <<<<<<<<<<<<<< @@ -4800,7 +4795,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList */ __pyx_v_done = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":44 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":44 * top = end * done = 0 * while not done: # <<<<<<<<<<<<<< @@ -4811,7 +4806,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList __pyx_t_3 = (!__pyx_v_done); if (!__pyx_t_3) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":45 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":45 * done = 0 * while not done: * while not done: # <<<<<<<<<<<<<< @@ -4822,7 +4817,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList __pyx_t_3 = (!__pyx_v_done); if (!__pyx_t_3) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":46 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":46 * while not done: * while not done: * bottom += 1 # <<<<<<<<<<<<<< @@ -4835,7 +4830,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList __pyx_v_bottom = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":47 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":47 * while not done: * bottom += 1 * if bottom == top: # <<<<<<<<<<<<<< @@ -4847,7 +4842,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":48 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":48 * bottom += 1 * if bottom == top: * done = 1 # <<<<<<<<<<<<<< @@ -4856,7 +4851,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList */ __pyx_v_done = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":49 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":49 * if bottom == top: * done = 1 * break # <<<<<<<<<<<<<< @@ -4868,7 +4863,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList } __pyx_L7:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":50 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":50 * done = 1 * break * if self.arr[bottom] > pivot: # <<<<<<<<<<<<<< @@ -4884,7 +4879,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":51 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":51 * break * if self.arr[bottom] > pivot: * self.arr[top] = self.arr[bottom] # <<<<<<<<<<<<<< @@ -4895,7 +4890,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList __pyx_t_5 = __Pyx_PyIndex_AsSsize_t(__pyx_v_top); if (unlikely((__pyx_t_5 == (Py_ssize_t)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 51; __pyx_clineno = __LINE__; goto __pyx_L1_error;} (__pyx_v_self->arr[__pyx_t_5]) = (__pyx_v_self->arr[__pyx_t_1]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":52 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":52 * if self.arr[bottom] > pivot: * self.arr[top] = self.arr[bottom] * break # <<<<<<<<<<<<<< @@ -4909,7 +4904,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList } __pyx_L6_break:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":53 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":53 * self.arr[top] = self.arr[bottom] * break * while not done: # <<<<<<<<<<<<<< @@ -4920,7 +4915,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList __pyx_t_3 = (!__pyx_v_done); if (!__pyx_t_3) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":54 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":54 * break * while not done: * top -= 1 # <<<<<<<<<<<<<< @@ -4933,7 +4928,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList __pyx_v_top = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":55 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":55 * while not done: * top -= 1 * if top == bottom: # <<<<<<<<<<<<<< @@ -4945,7 +4940,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":56 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":56 * top -= 1 * if top == bottom: * done = 1 # <<<<<<<<<<<<<< @@ -4954,7 +4949,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList */ __pyx_v_done = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":57 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":57 * if top == bottom: * done = 1 * break # <<<<<<<<<<<<<< @@ -4966,7 +4961,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList } __pyx_L11:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":58 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":58 * done = 1 * break * if self.arr[top] < pivot: # <<<<<<<<<<<<<< @@ -4982,7 +4977,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":59 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":59 * break * if self.arr[top] < pivot: * self.arr[bottom] = self.arr[top] # <<<<<<<<<<<<<< @@ -4993,7 +4988,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList __pyx_t_5 = __Pyx_PyIndex_AsSsize_t(__pyx_v_bottom); if (unlikely((__pyx_t_5 == (Py_ssize_t)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 59; __pyx_clineno = __LINE__; goto __pyx_L1_error;} (__pyx_v_self->arr[__pyx_t_5]) = (__pyx_v_self->arr[__pyx_t_1]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":60 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":60 * if self.arr[top] < pivot: * self.arr[bottom] = self.arr[top] * break # <<<<<<<<<<<<<< @@ -5008,7 +5003,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList __pyx_L10_break:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":61 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":61 * self.arr[bottom] = self.arr[top] * break * self.arr[top] = pivot # <<<<<<<<<<<<<< @@ -5019,7 +5014,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_6partition(struct __pyx_obj_3_sa_IntList __pyx_t_1 = __Pyx_PyIndex_AsSsize_t(__pyx_v_top); if (unlikely((__pyx_t_1 == (Py_ssize_t)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 61; __pyx_clineno = __LINE__; goto __pyx_L1_error;} (__pyx_v_self->arr[__pyx_t_1]) = __pyx_t_6; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":62 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":62 * break * self.arr[top] = pivot * return top # <<<<<<<<<<<<<< @@ -5103,7 +5098,7 @@ static PyObject *__pyx_pw_3_sa_7IntList_9_doquicksort(PyObject *__pyx_v_self, Py return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":64 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":64 * return top * * def _doquicksort(self,start,end): # <<<<<<<<<<<<<< @@ -5124,7 +5119,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_8_doquicksort(struct __pyx_obj_3_sa_IntL int __pyx_clineno = 0; __Pyx_RefNannySetupContext("_doquicksort", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":65 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":65 * * def _doquicksort(self,start,end): * if start < end: # <<<<<<<<<<<<<< @@ -5136,7 +5131,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_8_doquicksort(struct __pyx_obj_3_sa_IntL __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":66 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":66 * def _doquicksort(self,start,end): * if start < end: * split = self.partition(start,end) # <<<<<<<<<<<<<< @@ -5160,7 +5155,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_8_doquicksort(struct __pyx_obj_3_sa_IntL __pyx_v_split = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":67 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":67 * if start < end: * split = self.partition(start,end) * self._doquicksort(start,split-1) # <<<<<<<<<<<<<< @@ -5185,7 +5180,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_8_doquicksort(struct __pyx_obj_3_sa_IntL __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":68 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":68 * split = self.partition(start,end) * self._doquicksort(start,split-1) * self._doquicksort(split+1,end) # <<<<<<<<<<<<<< @@ -5213,7 +5208,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_8_doquicksort(struct __pyx_obj_3_sa_IntL } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":70 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":70 * self._doquicksort(split+1,end) * else: * return # <<<<<<<<<<<<<< @@ -5252,7 +5247,7 @@ static PyObject *__pyx_pw_3_sa_7IntList_11sort(PyObject *__pyx_v_self, CYTHON_UN return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":72 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":72 * return * * def sort(self): # <<<<<<<<<<<<<< @@ -5271,7 +5266,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_10sort(struct __pyx_obj_3_sa_IntList *__ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("sort", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":73 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":73 * * def sort(self): * self._doquicksort(0,self.len-1) # <<<<<<<<<<<<<< @@ -5321,7 +5316,7 @@ static PyObject *__pyx_pw_3_sa_7IntList_13reset(PyObject *__pyx_v_self, CYTHON_U return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":75 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":75 * self._doquicksort(0,self.len-1) * * def reset(self): # <<<<<<<<<<<<<< @@ -5334,7 +5329,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_12reset(struct __pyx_obj_3_sa_IntList *_ __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("reset", 0); 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if (unlikely(!__pyx_sent_value)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 81; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":83 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":83 * def __iter__(self): * cdef int i * for i in range(self.len): # <<<<<<<<<<<<<< @@ -5468,7 +5463,7 @@ static PyObject *__pyx_gb_3_sa_7IntList_18generator(__pyx_GeneratorObject *__pyx for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_1; __pyx_t_2+=1) { __pyx_cur_scope->__pyx_v_i = __pyx_t_2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":84 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":84 * cdef int i * for i in range(self.len): * yield self.arr[i] # <<<<<<<<<<<<<< @@ -5515,7 +5510,7 @@ static PyObject *__pyx_pw_3_sa_7IntList_20__getitem__(PyObject *__pyx_v_self, Py return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":86 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":86 * yield self.arr[i] * * def __getitem__(self, index): # <<<<<<<<<<<<<< @@ -5545,7 +5540,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL int __pyx_clineno = 0; 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if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":91 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":91 * j = index * if j < 0: * j = self.len + j # <<<<<<<<<<<<<< @@ -5590,7 +5585,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":92 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":92 * if j < 0: * j = self.len + j * if j<0 or j>=self.len: # <<<<<<<<<<<<<< @@ -5606,7 +5601,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL } if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":93 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":93 * j = self.len + j * if j<0 or j>=self.len: * raise IndexError("Requested index %d of %d-length IntList" % (index, self.len)) # <<<<<<<<<<<<<< @@ -5641,7 +5636,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":94 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":94 * if j<0 or j>=self.len: * raise IndexError("Requested index %d of %d-length IntList" % (index, self.len)) * return self.arr[j] # <<<<<<<<<<<<<< @@ -5657,7 +5652,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL goto __pyx_L3; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":95 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":95 * raise IndexError("Requested index %d of %d-length IntList" % (index, self.len)) * return self.arr[j] * elif isinstance(index, slice): # <<<<<<<<<<<<<< @@ -5670,7 +5665,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":96 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":96 * return self.arr[j] * elif isinstance(index, slice): * i = index.start # <<<<<<<<<<<<<< @@ -5683,7 +5678,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_v_i = __pyx_t_3; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":97 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":97 * elif isinstance(index, slice): * i = index.start * j = index.stop # <<<<<<<<<<<<<< @@ -5696,7 +5691,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_v_j = __pyx_t_3; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":98 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":98 * i = index.start * j = index.stop * if i < 0: # <<<<<<<<<<<<<< @@ -5706,7 +5701,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL __pyx_t_5 = (__pyx_v_i < 0); if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":99 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":99 * j = index.stop * if i < 0: * i = self.len + i # <<<<<<<<<<<<<< @@ -5718,7 +5713,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL } __pyx_L6:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":100 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":100 * if i < 0: * i = self.len + i * if j < 0: # <<<<<<<<<<<<<< @@ -5728,7 +5723,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL __pyx_t_5 = (__pyx_v_j < 0); if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":101 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":101 * i = self.len + i * if j < 0: * j = self.len + j # <<<<<<<<<<<<<< @@ -5740,7 +5735,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL } __pyx_L7:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":102 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":102 * if j < 0: * j = self.len + j * if i < 0 or i >= self.len or j < 0 or j > self.len: # <<<<<<<<<<<<<< @@ -5768,7 +5763,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL } if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":103 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":103 * j = self.len + j * if i < 0 or i >= self.len or j < 0 or j > self.len: * raise IndexError("Requested index %d:%d of %d-length IntList" % (index.start, index.stop, self.len)) # <<<<<<<<<<<<<< @@ -5810,7 +5805,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL } __pyx_L8:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":104 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":104 * if i < 0 or i >= self.len or j < 0 or j > self.len: * raise IndexError("Requested index %d:%d of %d-length IntList" % (index.start, index.stop, self.len)) * result = () # <<<<<<<<<<<<<< @@ -5820,7 +5815,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL __Pyx_INCREF(((PyObject *)__pyx_empty_tuple)); __pyx_v_result = __pyx_empty_tuple; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":105 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":105 * raise IndexError("Requested index %d:%d of %d-length IntList" % (index.start, index.stop, self.len)) * result = () * for k from i <= k < j: # <<<<<<<<<<<<<< @@ -5830,7 +5825,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL __pyx_t_3 = __pyx_v_j; for (__pyx_v_k = __pyx_v_i; __pyx_v_k < __pyx_t_3; __pyx_v_k++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":106 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":106 * result = () * for k from i <= k < j: * result = result + (self.arr[k],) # <<<<<<<<<<<<<< @@ -5852,7 +5847,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL __pyx_t_9 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":107 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":107 * for k from i <= k < j: * result = result + (self.arr[k],) * return result # <<<<<<<<<<<<<< @@ -5867,7 +5862,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":109 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":109 * return result * else: * raise TypeError("Illegal key type %s for IntList" % type(index)) # <<<<<<<<<<<<<< @@ -5906,7 +5901,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_19__getitem__(struct __pyx_obj_3_sa_IntL return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":111 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":111 * raise TypeError("Illegal key type %s for IntList" % type(index)) * * cdef void set(self, int i, int val): # <<<<<<<<<<<<<< @@ -5928,7 +5923,7 @@ static void __pyx_f_3_sa_7IntList_set(struct __pyx_obj_3_sa_IntList *__pyx_v_sel int __pyx_clineno = 0; 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- /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":115 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":115 * if i<0: * j = self.len + i * if j<0 or j>=self.len: # <<<<<<<<<<<<<< @@ -5975,7 +5970,7 @@ static void __pyx_f_3_sa_7IntList_set(struct __pyx_obj_3_sa_IntList *__pyx_v_sel } if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":116 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":116 * j = self.len + i * if j<0 or j>=self.len: * raise IndexError("Requested index %d of %d-length IntList" % (i, self.len)) # <<<<<<<<<<<<<< @@ -6012,7 +6007,7 @@ static void __pyx_f_3_sa_7IntList_set(struct __pyx_obj_3_sa_IntList *__pyx_v_sel } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":117 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":117 * if j<0 or j>=self.len: * raise IndexError("Requested index %d of %d-length IntList" % (i, self.len)) * self.arr[j] = val # <<<<<<<<<<<<<< @@ -6042,7 +6037,7 @@ static int __pyx_pw_3_sa_7IntList_22__setitem__(PyObject *__pyx_v_self, PyObject return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":119 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":119 * self.arr[j] = val * * def __setitem__(self, i, val): # <<<<<<<<<<<<<< @@ -6060,7 +6055,7 @@ static int __pyx_pf_3_sa_7IntList_21__setitem__(struct __pyx_obj_3_sa_IntList *_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__setitem__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":120 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":120 * * def __setitem__(self, i, val): * self.set(i, val) # <<<<<<<<<<<<<< @@ -6092,7 +6087,7 @@ static Py_ssize_t __pyx_pw_3_sa_7IntList_24__len__(PyObject *__pyx_v_self) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":122 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":122 * self.set(i, val) * * def __len__(self): # <<<<<<<<<<<<<< @@ -6105,7 +6100,7 @@ static Py_ssize_t __pyx_pf_3_sa_7IntList_23__len__(struct __pyx_obj_3_sa_IntList __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("__len__", 0); 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- /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":129 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":129 * * def append(self, int val): * self._append(val) # <<<<<<<<<<<<<< @@ -6224,7 +6219,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_27append(struct __pyx_obj_3_sa_IntList * return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":131 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":131 * self._append(val) * * cdef void _append(self, int val): # <<<<<<<<<<<<<< @@ -6237,7 +6232,7 @@ static void __pyx_f_3_sa_7IntList__append(struct __pyx_obj_3_sa_IntList *__pyx_v int __pyx_t_1; __Pyx_RefNannySetupContext("_append", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":132 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":132 * * cdef void _append(self, int val): * if self.len == self.size: # <<<<<<<<<<<<<< @@ -6247,7 +6242,7 @@ static void __pyx_f_3_sa_7IntList__append(struct __pyx_obj_3_sa_IntList *__pyx_v __pyx_t_1 = (__pyx_v_self->len == __pyx_v_self->size); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":133 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":133 * cdef void _append(self, int val): * if self.len == self.size: * self.size = self.size + self.increment # <<<<<<<<<<<<<< @@ -6256,7 +6251,7 @@ static void __pyx_f_3_sa_7IntList__append(struct __pyx_obj_3_sa_IntList *__pyx_v */ __pyx_v_self->size = (__pyx_v_self->size + __pyx_v_self->increment); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":134 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":134 * if self.len == self.size: * self.size = self.size + self.increment * self.arr = <int*> realloc(self.arr, self.size*sizeof(int)) # <<<<<<<<<<<<<< @@ -6268,7 +6263,7 @@ static void __pyx_f_3_sa_7IntList__append(struct __pyx_obj_3_sa_IntList *__pyx_v } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":135 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/int_list.pxi":135 * self.size = self.size + self.increment * self.arr = <int*> realloc(self.arr, self.size*sizeof(int)) * self.arr[self.len] = val # <<<<<<<<<<<<<< @@ -6277,7 +6272,7 @@ static void __pyx_f_3_sa_7IntList__append(struct __pyx_obj_3_sa_IntList *__pyx_v */ (__pyx_v_self->arr[__pyx_v_self->len]) = __pyx_v_val; 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} -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/str_map.pxi":19 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/str_map.pxi":19 * stringmap_delete(self.vocab) * * cdef char *word(self, int i): # <<<<<<<<<<<<<< @@ -6795,7 +6790,7 @@ static char *__pyx_f_3_sa_9StringMap_word(struct __pyx_obj_3_sa_StringMap *__pyx __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("word", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/str_map.pxi":20 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/str_map.pxi":20 * * cdef char *word(self, int i): * return stringmap_word(self.vocab, i) # <<<<<<<<<<<<<< @@ -6811,7 +6806,7 @@ static char *__pyx_f_3_sa_9StringMap_word(struct __pyx_obj_3_sa_StringMap *__pyx return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/str_map.pxi":22 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/str_map.pxi":22 * return stringmap_word(self.vocab, i) * * cdef int index(self, char *s): # <<<<<<<<<<<<<< @@ -6823,7 +6818,7 @@ static int __pyx_f_3_sa_9StringMap_index(struct __pyx_obj_3_sa_StringMap *__pyx_ __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("index", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/str_map.pxi":23 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/str_map.pxi":23 * * cdef int index(self, char *s): * return stringmap_index(self.vocab, s) # <<<<<<<<<<<<<< @@ -6851,7 +6846,7 @@ static int __pyx_pw_3_sa_9DataArray_1__cinit__(PyObject *__pyx_v_self, PyObject static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__from_binary,&__pyx_n_s__from_text,&__pyx_n_s__side,&__pyx_n_s__use_sent_id,0}; PyObject* values[4] = {0,0,0,0}; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":17 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":17 * cdef bint use_sent_id * * def __cinit__(self, from_binary=None, from_text=None, side=None, bint use_sent_id=False): # <<<<<<<<<<<<<< @@ -6943,7 +6938,7 @@ static int __pyx_pf_3_sa_9DataArray___cinit__(struct __pyx_obj_3_sa_DataArray *_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":18 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":18 * * def __cinit__(self, from_binary=None, from_text=None, side=None, bint use_sent_id=False): * self.word2id = {"END_OF_FILE":0, "END_OF_LINE":1} # <<<<<<<<<<<<<< @@ -6960,7 +6955,7 @@ static int __pyx_pf_3_sa_9DataArray___cinit__(struct __pyx_obj_3_sa_DataArray *_ __pyx_v_self->word2id = ((PyObject *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":19 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":19 * def __cinit__(self, from_binary=None, from_text=None, side=None, bint use_sent_id=False): * self.word2id = {"END_OF_FILE":0, "END_OF_LINE":1} * self.id2word = ["END_OF_FILE", "END_OF_LINE"] # <<<<<<<<<<<<<< @@ -6981,7 +6976,7 @@ static int __pyx_pf_3_sa_9DataArray___cinit__(struct __pyx_obj_3_sa_DataArray *_ __pyx_v_self->id2word = ((PyObject *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":20 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":20 * self.word2id = {"END_OF_FILE":0, "END_OF_LINE":1} * self.id2word = ["END_OF_FILE", "END_OF_LINE"] * self.data = IntList(1000,1000) # <<<<<<<<<<<<<< @@ -6996,7 +6991,7 @@ static int __pyx_pf_3_sa_9DataArray___cinit__(struct __pyx_obj_3_sa_DataArray *_ __pyx_v_self->data = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":21 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":21 * self.id2word = ["END_OF_FILE", "END_OF_LINE"] * self.data = IntList(1000,1000) * self.sent_id = IntList(1000,1000) # <<<<<<<<<<<<<< @@ -7011,7 +7006,7 @@ static int __pyx_pf_3_sa_9DataArray___cinit__(struct __pyx_obj_3_sa_DataArray *_ __pyx_v_self->sent_id = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":22 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":22 * self.data = IntList(1000,1000) * self.sent_id = IntList(1000,1000) * self.sent_index = IntList(1000,1000) # <<<<<<<<<<<<<< @@ -7026,7 +7021,7 @@ static int __pyx_pf_3_sa_9DataArray___cinit__(struct __pyx_obj_3_sa_DataArray *_ __pyx_v_self->sent_index = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":23 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":23 * self.sent_id = IntList(1000,1000) * self.sent_index = IntList(1000,1000) * self.use_sent_id = use_sent_id # <<<<<<<<<<<<<< @@ -7035,7 +7030,7 @@ static int __pyx_pf_3_sa_9DataArray___cinit__(struct __pyx_obj_3_sa_DataArray *_ */ __pyx_v_self->use_sent_id = __pyx_v_use_sent_id; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":24 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":24 * self.sent_index = IntList(1000,1000) * self.use_sent_id = use_sent_id * if from_binary: # <<<<<<<<<<<<<< @@ -7045,7 +7040,7 @@ static int __pyx_pf_3_sa_9DataArray___cinit__(struct __pyx_obj_3_sa_DataArray *_ __pyx_t_2 = __Pyx_PyObject_IsTrue(__pyx_v_from_binary); if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 24; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":25 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":25 * self.use_sent_id = use_sent_id * if from_binary: * self.read_binary(from_binary) # <<<<<<<<<<<<<< @@ -7067,7 +7062,7 @@ static int __pyx_pf_3_sa_9DataArray___cinit__(struct __pyx_obj_3_sa_DataArray *_ goto __pyx_L3; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":26 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":26 * if from_binary: * self.read_binary(from_binary) * elif from_text: # <<<<<<<<<<<<<< @@ -7077,7 +7072,7 @@ static int __pyx_pf_3_sa_9DataArray___cinit__(struct __pyx_obj_3_sa_DataArray *_ __pyx_t_2 = __Pyx_PyObject_IsTrue(__pyx_v_from_text); if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":27 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":27 * self.read_binary(from_binary) * elif from_text: * if side: # <<<<<<<<<<<<<< @@ -7087,7 +7082,7 @@ static int __pyx_pf_3_sa_9DataArray___cinit__(struct __pyx_obj_3_sa_DataArray *_ __pyx_t_2 = __Pyx_PyObject_IsTrue(__pyx_v_side); if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 27; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":28 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":28 * elif from_text: * if side: * self.read_bitext(from_text, (0 if side == 'source' else 1)) # <<<<<<<<<<<<<< @@ -7123,7 +7118,7 @@ static int __pyx_pf_3_sa_9DataArray___cinit__(struct __pyx_obj_3_sa_DataArray *_ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":30 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":30 * self.read_bitext(from_text, (0 if side == 'source' else 1)) * else: * self.read_text(from_text) # <<<<<<<<<<<<<< @@ -7172,7 +7167,7 @@ static Py_ssize_t __pyx_pw_3_sa_9DataArray_3__len__(PyObject *__pyx_v_self) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":32 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":32 * self.read_text(from_text) * * def __len__(self): # <<<<<<<<<<<<<< @@ -7190,7 +7185,7 @@ static Py_ssize_t __pyx_pf_3_sa_9DataArray_2__len__(struct __pyx_obj_3_sa_DataAr int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__len__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":33 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":33 * * def __len__(self): * return len(self.data) # <<<<<<<<<<<<<< @@ -7226,7 +7221,7 @@ static PyObject *__pyx_pw_3_sa_9DataArray_5get_sentence_id(PyObject *__pyx_v_sel return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":35 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":35 * return len(self.data) * * def get_sentence_id(self, i): # <<<<<<<<<<<<<< @@ -7244,7 +7239,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_4get_sentence_id(struct __pyx_obj_3_sa int __pyx_clineno = 0; __Pyx_RefNannySetupContext("get_sentence_id", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":36 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":36 * * def get_sentence_id(self, i): * return self.sent_id.arr[i] # <<<<<<<<<<<<<< @@ -7282,7 +7277,7 @@ static PyObject *__pyx_pw_3_sa_9DataArray_7get_sentence(PyObject *__pyx_v_self, return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":38 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":38 * return self.sent_id.arr[i] * * def get_sentence(self, i): # <<<<<<<<<<<<<< @@ -7307,7 +7302,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_6get_sentence(struct __pyx_obj_3_sa_Da __Pyx_RefNannySetupContext("get_sentence", 0); __Pyx_INCREF(__pyx_v_i); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":40 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":40 * def get_sentence(self, i): * cdef int j, start, stop * sent = [] # <<<<<<<<<<<<<< @@ -7319,7 +7314,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_6get_sentence(struct __pyx_obj_3_sa_Da __pyx_v_sent = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":41 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":41 * cdef int j, start, stop * sent = [] * start = self.sent_index.arr[i] # <<<<<<<<<<<<<< @@ -7329,7 +7324,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_6get_sentence(struct __pyx_obj_3_sa_Da __pyx_t_2 = __Pyx_PyIndex_AsSsize_t(__pyx_v_i); if (unlikely((__pyx_t_2 == (Py_ssize_t)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 41; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_start = (__pyx_v_self->sent_index->arr[__pyx_t_2]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":42 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":42 * sent = [] * start = self.sent_index.arr[i] * stop = self.sent_index.arr[i+1] # <<<<<<<<<<<<<< @@ -7342,7 +7337,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_6get_sentence(struct __pyx_obj_3_sa_Da __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_v_stop = (__pyx_v_self->sent_index->arr[__pyx_t_2]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":43 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":43 * start = self.sent_index.arr[i] * stop = self.sent_index.arr[i+1] * for i from start <= i < stop: # <<<<<<<<<<<<<< @@ -7357,7 +7352,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_6get_sentence(struct __pyx_obj_3_sa_Da __pyx_v_i = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":44 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":44 * stop = self.sent_index.arr[i+1] * for i from start <= i < stop: * sent.append(self.id2word[self.data.arr[i]]) # <<<<<<<<<<<<<< @@ -7372,7 +7367,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_6get_sentence(struct __pyx_obj_3_sa_Da __pyx_t_4 = __Pyx_PyInt_AsInt(__pyx_v_i); if (unlikely((__pyx_t_4 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 43; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":43 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":43 * start = self.sent_index.arr[i] * stop = self.sent_index.arr[i+1] * for i from start <= i < stop: # <<<<<<<<<<<<<< @@ -7385,7 +7380,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_6get_sentence(struct __pyx_obj_3_sa_Da __pyx_v_i = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":45 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":45 * for i from start <= i < stop: * sent.append(self.id2word[self.data.arr[i]]) * return sent # <<<<<<<<<<<<<< @@ -7422,7 +7417,7 @@ static PyObject *__pyx_pw_3_sa_9DataArray_9get_id(PyObject *__pyx_v_self, PyObje return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":47 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":47 * return sent * * def get_id(self, word): # <<<<<<<<<<<<<< @@ -7442,7 +7437,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_8get_id(struct __pyx_obj_3_sa_DataArra int __pyx_clineno = 0; __Pyx_RefNannySetupContext("get_id", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":48 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":48 * * def get_id(self, word): * if not word in self.word2id: # <<<<<<<<<<<<<< @@ -7453,7 +7448,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_8get_id(struct __pyx_obj_3_sa_DataArra __pyx_t_2 = (!__pyx_t_1); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":49 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":49 * def get_id(self, word): * if not word in self.word2id: * self.word2id[word] = len(self.id2word) # <<<<<<<<<<<<<< @@ -7469,7 +7464,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_8get_id(struct __pyx_obj_3_sa_DataArra if (PyObject_SetItem(__pyx_v_self->word2id, __pyx_v_word, __pyx_t_3) < 0) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 49; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":50 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":50 * if not word in self.word2id: * self.word2id[word] = len(self.id2word) * self.id2word.append(word) # <<<<<<<<<<<<<< @@ -7483,7 +7478,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_8get_id(struct __pyx_obj_3_sa_DataArra } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":51 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":51 * self.word2id[word] = len(self.id2word) * self.id2word.append(word) * return self.word2id[word] # <<<<<<<<<<<<<< @@ -7520,7 +7515,7 @@ static PyObject *__pyx_pw_3_sa_9DataArray_11__getitem__(PyObject *__pyx_v_self, return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":53 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":53 * return self.word2id[word] * * def __getitem__(self, loc): # <<<<<<<<<<<<<< @@ -7538,7 +7533,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_10__getitem__(struct __pyx_obj_3_sa_Da int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__getitem__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":54 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":54 * * def __getitem__(self, loc): * return self.id2word[self.data.arr[loc]] # <<<<<<<<<<<<<< @@ -7576,7 +7571,7 @@ static PyObject *__pyx_pw_3_sa_9DataArray_13get_sentence_bounds(PyObject *__pyx_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":56 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":56 * return self.id2word[self.data.arr[loc]] * * def get_sentence_bounds(self, loc): # <<<<<<<<<<<<<< @@ -7597,7 +7592,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_12get_sentence_bounds(struct __pyx_obj int __pyx_clineno = 0; __Pyx_RefNannySetupContext("get_sentence_bounds", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":57 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":57 * * def get_sentence_bounds(self, loc): * cdef int sid = self.sent_id.arr[loc] # <<<<<<<<<<<<<< @@ -7607,7 +7602,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_12get_sentence_bounds(struct __pyx_obj __pyx_t_1 = __Pyx_PyIndex_AsSsize_t(__pyx_v_loc); 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__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":70 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":70 * def read_text(self, char* filename): * with gzip_or_text(filename) as fp: * self.read_text_data(fp) # <<<<<<<<<<<<<< @@ -8090,7 +8085,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_16read_text(struct __pyx_obj_3_sa_Data __Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_XDECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":69 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":69 * * def read_text(self, char* filename): * with gzip_or_text(filename) as fp: # <<<<<<<<<<<<<< @@ -8243,7 +8238,7 @@ static PyObject *__pyx_pw_3_sa_9DataArray_19read_bitext(PyObject *__pyx_v_self, } static PyObject *__pyx_gb_3_sa_9DataArray_11read_bitext_2generator6(__pyx_GeneratorObject *__pyx_generator, PyObject *__pyx_sent_value); /* proto */ -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":74 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":74 * def read_bitext(self, char* filename, int side): * with gzip_or_text(filename) as fp: * data = (line.split(' ||| ')[side] for line in fp) # <<<<<<<<<<<<<< @@ -8390,7 +8385,7 @@ static PyObject *__pyx_gb_3_sa_9DataArray_11read_bitext_2generator6(__pyx_Genera return NULL; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":72 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":72 * self.read_text_data(fp) * * def read_bitext(self, char* filename, int side): # <<<<<<<<<<<<<< @@ -8426,7 +8421,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_18read_bitext(struct __pyx_obj_3_sa_Da __Pyx_GOTREF(__pyx_cur_scope); __pyx_cur_scope->__pyx_v_side = __pyx_v_side; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":73 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":73 * * def read_bitext(self, char* filename, int side): * with gzip_or_text(filename) as fp: # <<<<<<<<<<<<<< @@ -8467,7 +8462,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_18read_bitext(struct __pyx_obj_3_sa_Da __pyx_cur_scope->__pyx_v_fp = __pyx_t_1; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":74 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":74 * def read_bitext(self, char* filename, int side): * with gzip_or_text(filename) as fp: * data = (line.split(' ||| ')[side] for line in fp) # <<<<<<<<<<<<<< @@ -8479,7 +8474,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_18read_bitext(struct __pyx_obj_3_sa_Da __pyx_v_data = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":75 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":75 * with gzip_or_text(filename) as fp: * data = (line.split(' ||| ')[side] for line in fp) * self.read_text_data(data) # <<<<<<<<<<<<<< @@ -8508,7 +8503,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_18read_bitext(struct __pyx_obj_3_sa_Da __Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_XDECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":73 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":73 * * def read_bitext(self, char* filename, int side): * with gzip_or_text(filename) as fp: # <<<<<<<<<<<<<< @@ -8616,7 +8611,7 @@ static PyObject *__pyx_pw_3_sa_9DataArray_21read_text_data(PyObject *__pyx_v_sel return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":77 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":77 * self.read_text_data(data) * * def read_text_data(self, data): # <<<<<<<<<<<<<< @@ -8646,7 +8641,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_20read_text_data(struct __pyx_obj_3_sa int __pyx_clineno = 0; 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- /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":89 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":89 * if self.use_sent_id: * self.sent_id.append(line_num) * word_count = word_count + 1 # <<<<<<<<<<<<<< @@ -8878,7 +8873,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_20read_text_data(struct __pyx_obj_3_sa __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":90 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":90 * self.sent_id.append(line_num) * word_count = word_count + 1 * self.data.append(0) # <<<<<<<<<<<<<< @@ -8889,7 +8884,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_20read_text_data(struct __pyx_obj_3_sa __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":91 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":91 * word_count = word_count + 1 * self.data.append(0) * self.sent_index.append(word_count) # <<<<<<<<<<<<<< @@ -8944,7 +8939,7 @@ static PyObject *__pyx_pw_3_sa_9DataArray_23read_binary(PyObject *__pyx_v_self, return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":94 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":94 * * * def read_binary(self, char* filename): # <<<<<<<<<<<<<< @@ -8958,7 +8953,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_22read_binary(struct __pyx_obj_3_sa_Da __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("read_binary", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":96 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":96 * def read_binary(self, char* filename): * cdef FILE* f * f = fopen(filename, "r") # <<<<<<<<<<<<<< @@ -8967,7 +8962,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_22read_binary(struct __pyx_obj_3_sa_Da */ __pyx_v_f = fopen(__pyx_v_filename, __pyx_k__r); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":97 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":97 * cdef FILE* f * f = fopen(filename, "r") * self.read_handle(f) # <<<<<<<<<<<<<< @@ -8976,7 +8971,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_22read_binary(struct __pyx_obj_3_sa_Da */ ((struct __pyx_vtabstruct_3_sa_DataArray *)__pyx_v_self->__pyx_vtab)->read_handle(__pyx_v_self, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":98 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":98 * f = fopen(filename, "r") * self.read_handle(f) * fclose(f) # <<<<<<<<<<<<<< @@ -8991,7 +8986,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_22read_binary(struct __pyx_obj_3_sa_Da return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":100 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":100 * fclose(f) * * cdef void read_handle(self, FILE* f): # <<<<<<<<<<<<<< @@ -9016,7 +9011,7 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray int __pyx_clineno = 0; __Pyx_RefNannySetupContext("read_handle", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":105 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":105 * cdef char* word * * self.data.read_handle(f) # <<<<<<<<<<<<<< @@ -9025,7 +9020,7 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->data->__pyx_vtab)->read_handle(__pyx_v_self->data, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":106 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":106 * * self.data.read_handle(f) * self.sent_index.read_handle(f) # <<<<<<<<<<<<<< @@ -9034,7 +9029,7 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->sent_index->__pyx_vtab)->read_handle(__pyx_v_self->sent_index, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":107 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":107 * self.data.read_handle(f) * self.sent_index.read_handle(f) * self.sent_id.read_handle(f) # <<<<<<<<<<<<<< @@ -9043,7 +9038,7 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->sent_id->__pyx_vtab)->read_handle(__pyx_v_self->sent_id, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":108 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":108 * self.sent_index.read_handle(f) * self.sent_id.read_handle(f) * fread(&(num_words), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -9052,7 +9047,7 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray */ fread((&__pyx_v_num_words), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":109 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":109 * self.sent_id.read_handle(f) * fread(&(num_words), sizeof(int), 1, f) * for i in range(num_words): # <<<<<<<<<<<<<< @@ -9063,7 +9058,7 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_1; __pyx_t_2+=1) { __pyx_v_i = __pyx_t_2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":110 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":110 * fread(&(num_words), sizeof(int), 1, f) * for i in range(num_words): * fread(&(word_len), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -9072,7 +9067,7 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray */ fread((&__pyx_v_word_len), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":111 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":111 * for i in range(num_words): * fread(&(word_len), sizeof(int), 1, f) * word = <char*> malloc (word_len * sizeof(char)) # <<<<<<<<<<<<<< @@ -9081,7 +9076,7 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray */ __pyx_v_word = ((char *)malloc((__pyx_v_word_len * (sizeof(char))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":112 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":112 * fread(&(word_len), sizeof(int), 1, f) * word = <char*> malloc (word_len * sizeof(char)) * fread(word, sizeof(char), word_len, f) # <<<<<<<<<<<<<< @@ -9090,7 +9085,7 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray */ fread(__pyx_v_word, (sizeof(char)), __pyx_v_word_len, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":113 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":113 * word = <char*> malloc (word_len * sizeof(char)) * fread(word, sizeof(char), word_len, f) * self.word2id[word] = len(self.id2word) # <<<<<<<<<<<<<< @@ -9109,7 +9104,7 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray __Pyx_DECREF(((PyObject *)__pyx_t_5)); __pyx_t_5 = 0; __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":114 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":114 * fread(word, sizeof(char), word_len, f) * self.word2id[word] = len(self.id2word) * self.id2word.append(word) # <<<<<<<<<<<<<< @@ -9123,7 +9118,7 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray __Pyx_DECREF(((PyObject *)__pyx_t_3)); __pyx_t_3 = 0; __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":115 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":115 * self.word2id[word] = len(self.id2word) * self.id2word.append(word) * free(word) # <<<<<<<<<<<<<< @@ -9133,7 +9128,7 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray free(__pyx_v_word); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":116 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":116 * self.id2word.append(word) * free(word) * if len(self.sent_id) == 0: # <<<<<<<<<<<<<< @@ -9147,7 +9142,7 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray __pyx_t_6 = (__pyx_t_4 == 0); if (__pyx_t_6) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":117 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":117 * free(word) * if len(self.sent_id) == 0: * self.use_sent_id = False # <<<<<<<<<<<<<< @@ -9159,7 +9154,7 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":119 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":119 * self.use_sent_id = False * else: * self.use_sent_id = True # <<<<<<<<<<<<<< @@ -9179,7 +9174,7 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray __Pyx_RefNannyFinishContext(); } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":121 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":121 * self.use_sent_id = True * * cdef void write_handle(self, FILE* f): # <<<<<<<<<<<<<< @@ -9203,7 +9198,7 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray int __pyx_clineno = 0; __Pyx_RefNannySetupContext("write_handle", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":125 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":125 * cdef int num_words * * self.data.write_handle(f) # <<<<<<<<<<<<<< @@ -9212,7 +9207,7 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->data->__pyx_vtab)->write_handle(__pyx_v_self->data, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":126 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":126 * * self.data.write_handle(f) * self.sent_index.write_handle(f) # <<<<<<<<<<<<<< @@ -9221,7 +9216,7 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->sent_index->__pyx_vtab)->write_handle(__pyx_v_self->sent_index, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":127 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":127 * self.data.write_handle(f) * self.sent_index.write_handle(f) * self.sent_id.write_handle(f) # <<<<<<<<<<<<<< @@ -9230,7 +9225,7 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->sent_id->__pyx_vtab)->write_handle(__pyx_v_self->sent_id, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":128 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":128 * self.sent_index.write_handle(f) * self.sent_id.write_handle(f) * num_words = len(self.id2word) - 2 # <<<<<<<<<<<<<< @@ -9243,7 +9238,7 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_v_num_words = (__pyx_t_2 - 2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":129 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":129 * self.sent_id.write_handle(f) * num_words = len(self.id2word) - 2 * fwrite(&(num_words), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -9252,7 +9247,7 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray */ fwrite((&__pyx_v_num_words), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":130 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":130 * num_words = len(self.id2word) - 2 * fwrite(&(num_words), sizeof(int), 1, f) * for word in self.id2word[2:]: # <<<<<<<<<<<<<< @@ -9300,7 +9295,7 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray __pyx_v_word = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":131 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":131 * fwrite(&(num_words), sizeof(int), 1, f) * for word in self.id2word[2:]: * word_len = len(word) + 1 # <<<<<<<<<<<<<< @@ -9310,7 +9305,7 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray __pyx_t_5 = PyObject_Length(__pyx_v_word); if (unlikely(__pyx_t_5 == -1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 131; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_word_len = (__pyx_t_5 + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":132 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":132 * for word in self.id2word[2:]: * word_len = len(word) + 1 * fwrite(&(word_len), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -9319,7 +9314,7 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray */ fwrite((&__pyx_v_word_len), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":133 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":133 * word_len = len(word) + 1 * fwrite(&(word_len), sizeof(int), 1, f) * fwrite(<char *>word, sizeof(char), word_len, f) # <<<<<<<<<<<<<< @@ -9362,7 +9357,7 @@ static PyObject *__pyx_pw_3_sa_9DataArray_25write_binary(PyObject *__pyx_v_self, return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":135 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":135 * fwrite(<char *>word, sizeof(char), word_len, f) * * def write_binary(self, char* filename): # <<<<<<<<<<<<<< @@ -9376,7 +9371,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_24write_binary(struct __pyx_obj_3_sa_D __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("write_binary", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":137 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":137 * def write_binary(self, char* filename): * cdef FILE* f * f = fopen(filename, "w") # <<<<<<<<<<<<<< @@ -9385,7 +9380,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_24write_binary(struct __pyx_obj_3_sa_D */ __pyx_v_f = fopen(__pyx_v_filename, __pyx_k__w); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":138 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":138 * cdef FILE* f * f = fopen(filename, "w") * self.write_handle(f) # <<<<<<<<<<<<<< @@ -9394,7 +9389,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_24write_binary(struct __pyx_obj_3_sa_D */ ((struct __pyx_vtabstruct_3_sa_DataArray *)__pyx_v_self->__pyx_vtab)->write_handle(__pyx_v_self, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":139 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":139 * f = fopen(filename, "w") * self.write_handle(f) * fclose(f) # <<<<<<<<<<<<<< @@ -9420,7 +9415,7 @@ static PyObject *__pyx_pw_3_sa_9DataArray_27write_enhanced_handle(PyObject *__py return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":141 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":141 * fclose(f) * * def write_enhanced_handle(self, f): # <<<<<<<<<<<<<< @@ -9444,7 +9439,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_26write_enhanced_handle(struct __pyx_o int __pyx_clineno = 0; __Pyx_RefNannySetupContext("write_enhanced_handle", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":142 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":142 * * def write_enhanced_handle(self, f): * for i in self.data: # <<<<<<<<<<<<<< @@ -9489,7 +9484,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_26write_enhanced_handle(struct __pyx_o __pyx_v_i = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":143 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":143 * def write_enhanced_handle(self, f): * for i in self.data: * f.write("%d " %i) # <<<<<<<<<<<<<< @@ -9513,7 +9508,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_26write_enhanced_handle(struct __pyx_o } __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":144 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":144 * for i in self.data: * f.write("%d " %i) * f.write("\n") # <<<<<<<<<<<<<< @@ -9527,7 +9522,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_26write_enhanced_handle(struct __pyx_o __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":145 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":145 * f.write("%d " %i) * f.write("\n") * for i in self.sent_index: # <<<<<<<<<<<<<< @@ -9572,7 +9567,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_26write_enhanced_handle(struct __pyx_o __pyx_v_i = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":146 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":146 * f.write("\n") * for i in self.sent_index: * f.write("%d " %i) # <<<<<<<<<<<<<< @@ -9596,7 +9591,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_26write_enhanced_handle(struct __pyx_o } __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":147 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":147 * for i in self.sent_index: * f.write("%d " %i) * f.write("\n") # <<<<<<<<<<<<<< @@ -9610,7 +9605,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_26write_enhanced_handle(struct __pyx_o __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":148 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":148 * f.write("%d " %i) * f.write("\n") * for i in self.sent_id: # <<<<<<<<<<<<<< @@ -9655,7 +9650,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_26write_enhanced_handle(struct __pyx_o __pyx_v_i = __pyx_t_5; __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":149 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":149 * f.write("\n") * for i in self.sent_id: * f.write("%d " %i) # <<<<<<<<<<<<<< @@ -9679,7 +9674,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_26write_enhanced_handle(struct __pyx_o } __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":150 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":150 * for i in self.sent_id: * f.write("%d " %i) * f.write("\n") # <<<<<<<<<<<<<< @@ -9693,7 +9688,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_26write_enhanced_handle(struct __pyx_o __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":151 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":151 * f.write("%d " %i) * f.write("\n") * for word in self.id2word: # <<<<<<<<<<<<<< @@ -9738,7 +9733,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_26write_enhanced_handle(struct __pyx_o __pyx_v_word = __pyx_t_6; __pyx_t_6 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":152 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":152 * f.write("\n") * for word in self.id2word: * f.write("%s %d " % (word, self.word2id[word])) # <<<<<<<<<<<<<< @@ -9773,7 +9768,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_26write_enhanced_handle(struct __pyx_o } __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":153 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":153 * for word in self.id2word: * f.write("%s %d " % (word, self.word2id[word])) * f.write("\n") # <<<<<<<<<<<<<< @@ -9825,7 +9820,7 @@ static PyObject *__pyx_pw_3_sa_9DataArray_29write_enhanced(PyObject *__pyx_v_sel return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":155 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":155 * f.write("\n") * * def write_enhanced(self, char* filename): # <<<<<<<<<<<<<< @@ -9853,7 +9848,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_28write_enhanced(struct __pyx_obj_3_sa int __pyx_clineno = 0; __Pyx_RefNannySetupContext("write_enhanced", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":156 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":156 * * def write_enhanced(self, char* filename): * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -9892,7 +9887,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_28write_enhanced(struct __pyx_obj_3_sa __pyx_v_f = __pyx_t_4; __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":157 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":157 * def write_enhanced(self, char* filename): * with open(filename, "w") as f: * self.write_enhanced_handle(self, f) # <<<<<<<<<<<<<< @@ -9922,7 +9917,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_28write_enhanced(struct __pyx_obj_3_sa __Pyx_XDECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":156 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":156 * * def write_enhanced(self, char* filename): * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -10028,7 +10023,7 @@ static PyObject *__pyx_pw_3_sa_9DataArray_7word2id_1__get__(PyObject *__pyx_v_se return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":10 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":10 * * cdef class DataArray: * cdef public word2id # <<<<<<<<<<<<<< @@ -10115,7 +10110,7 @@ static PyObject *__pyx_pw_3_sa_9DataArray_7id2word_1__get__(PyObject *__pyx_v_se return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":11 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":11 * cdef class DataArray: * cdef public word2id * cdef public id2word # <<<<<<<<<<<<<< @@ -10202,7 +10197,7 @@ static PyObject *__pyx_pw_3_sa_9DataArray_4data_1__get__(PyObject *__pyx_v_self) return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":12 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":12 * cdef public word2id * cdef public id2word * cdef public IntList data # <<<<<<<<<<<<<< @@ -10298,7 +10293,7 @@ static PyObject *__pyx_pw_3_sa_9DataArray_7sent_id_1__get__(PyObject *__pyx_v_se return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":13 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":13 * cdef public id2word * cdef public IntList data * cdef public IntList sent_id # <<<<<<<<<<<<<< @@ -10394,7 +10389,7 @@ static PyObject *__pyx_pw_3_sa_9DataArray_10sent_index_1__get__(PyObject *__pyx_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":14 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":14 * cdef public IntList data * cdef public IntList sent_id * cdef public IntList sent_index # <<<<<<<<<<<<<< @@ -10479,7 +10474,7 @@ static int __pyx_pf_3_sa_9DataArray_10sent_index_4__del__(struct __pyx_obj_3_sa_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":12 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":12 * cdef IntList sent_index * * cdef int link(self, int i, int j): # <<<<<<<<<<<<<< @@ -10492,7 +10487,7 @@ static int __pyx_f_3_sa_9Alignment_link(CYTHON_UNUSED struct __pyx_obj_3_sa_Alig __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("link", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":14 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":14 * cdef int link(self, int i, int j): * """Integerizes an alignment link pair""" * return i*65536 + j # <<<<<<<<<<<<<< @@ -10520,7 +10515,7 @@ static PyObject *__pyx_pw_3_sa_9Alignment_1unlink(PyObject *__pyx_v_self, PyObje return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":16 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":16 * return i*65536 + j * * def unlink(self, link): # <<<<<<<<<<<<<< @@ -10539,7 +10534,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_unlink(CYTHON_UNUSED struct __pyx_obj_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("unlink", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":18 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":18 * def unlink(self, link): * """De-integerizes an alignment link pair""" * return (link/65536, link%65536) # <<<<<<<<<<<<<< @@ -10577,7 +10572,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_unlink(CYTHON_UNUSED struct __pyx_obj_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":20 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":20 * return (link/65536, link%65536) * * cdef _unlink(self, int link, int* f, int* e): # <<<<<<<<<<<<<< @@ -10590,7 +10585,7 @@ static PyObject *__pyx_f_3_sa_9Alignment__unlink(CYTHON_UNUSED struct __pyx_obj_ __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("_unlink", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":21 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":21 * * cdef _unlink(self, int link, int* f, int* e): * f[0] = link/65536 # <<<<<<<<<<<<<< @@ -10599,7 +10594,7 @@ static PyObject *__pyx_f_3_sa_9Alignment__unlink(CYTHON_UNUSED struct __pyx_obj_ */ (__pyx_v_f[0]) = __Pyx_div_long(__pyx_v_link, 65536); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":22 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":22 * cdef _unlink(self, int link, int* f, int* e): * f[0] = link/65536 * e[0] = link%65536 # <<<<<<<<<<<<<< @@ -10635,7 +10630,7 @@ static PyObject *__pyx_pw_3_sa_9Alignment_3get_sent_links(PyObject *__pyx_v_self return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":24 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":24 * e[0] = link%65536 * * def get_sent_links(self, int sent_id): # <<<<<<<<<<<<<< @@ -10655,7 +10650,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_2get_sent_links(struct __pyx_obj_3_sa_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("get_sent_links", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":28 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":28 * cdef int* arr * cdef int arr_len * sent_links = IntList() # <<<<<<<<<<<<<< @@ -10667,7 +10662,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_2get_sent_links(struct __pyx_obj_3_sa_ __pyx_v_sent_links = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":29 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":29 * cdef int arr_len * sent_links = IntList() * arr = self._get_sent_links(sent_id, &arr_len) # <<<<<<<<<<<<<< @@ -10676,7 +10671,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_2get_sent_links(struct __pyx_obj_3_sa_ */ __pyx_v_arr = ((struct __pyx_vtabstruct_3_sa_Alignment *)__pyx_v_self->__pyx_vtab)->_get_sent_links(__pyx_v_self, __pyx_v_sent_id, (&__pyx_v_arr_len)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":30 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":30 * sent_links = IntList() * arr = self._get_sent_links(sent_id, &arr_len) * sent_links._extend_arr(arr, arr_len*2) # <<<<<<<<<<<<<< @@ -10685,7 +10680,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_2get_sent_links(struct __pyx_obj_3_sa_ */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_sent_links->__pyx_vtab)->_extend_arr(__pyx_v_sent_links, __pyx_v_arr, (__pyx_v_arr_len * 2)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":31 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":31 * arr = self._get_sent_links(sent_id, &arr_len) * sent_links._extend_arr(arr, arr_len*2) * free(arr) # <<<<<<<<<<<<<< @@ -10694,7 +10689,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_2get_sent_links(struct __pyx_obj_3_sa_ */ free(__pyx_v_arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":32 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":32 * sent_links._extend_arr(arr, arr_len*2) * free(arr) * return sent_links # <<<<<<<<<<<<<< @@ -10719,7 +10714,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_2get_sent_links(struct __pyx_obj_3_sa_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":34 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":34 * return sent_links * * cdef int* _get_sent_links(self, int sent_id, int* num_links): # <<<<<<<<<<<<<< @@ -10741,7 +10736,7 @@ static int *__pyx_f_3_sa_9Alignment__get_sent_links(struct __pyx_obj_3_sa_Alignm int __pyx_clineno = 0; __Pyx_RefNannySetupContext("_get_sent_links", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":37 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":37 * cdef int* sent_links * cdef int i, start, end * start = self.sent_index.arr[sent_id] # <<<<<<<<<<<<<< @@ -10750,7 +10745,7 @@ static int *__pyx_f_3_sa_9Alignment__get_sent_links(struct __pyx_obj_3_sa_Alignm */ __pyx_v_start = (__pyx_v_self->sent_index->arr[__pyx_v_sent_id]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":38 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":38 * cdef int i, start, end * start = self.sent_index.arr[sent_id] * end = self.sent_index.arr[sent_id+1] # <<<<<<<<<<<<<< @@ -10759,7 +10754,7 @@ static int *__pyx_f_3_sa_9Alignment__get_sent_links(struct __pyx_obj_3_sa_Alignm */ __pyx_v_end = (__pyx_v_self->sent_index->arr[(__pyx_v_sent_id + 1)]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":39 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":39 * start = self.sent_index.arr[sent_id] * end = self.sent_index.arr[sent_id+1] * num_links[0] = end - start # <<<<<<<<<<<<<< @@ -10768,7 +10763,7 @@ static int *__pyx_f_3_sa_9Alignment__get_sent_links(struct __pyx_obj_3_sa_Alignm */ (__pyx_v_num_links[0]) = (__pyx_v_end - __pyx_v_start); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":40 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":40 * end = self.sent_index.arr[sent_id+1] * num_links[0] = end - start * sent_links = <int*> malloc(2*num_links[0]*sizeof(int)) # <<<<<<<<<<<<<< @@ -10777,7 +10772,7 @@ static int *__pyx_f_3_sa_9Alignment__get_sent_links(struct __pyx_obj_3_sa_Alignm */ __pyx_v_sent_links = ((int *)malloc(((2 * (__pyx_v_num_links[0])) * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":41 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":41 * num_links[0] = end - start * sent_links = <int*> malloc(2*num_links[0]*sizeof(int)) * for i from 0 <= i < num_links[0]: # <<<<<<<<<<<<<< @@ -10787,7 +10782,7 @@ static int *__pyx_f_3_sa_9Alignment__get_sent_links(struct __pyx_obj_3_sa_Alignm __pyx_t_1 = (__pyx_v_num_links[0]); for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_1; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":42 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":42 * sent_links = <int*> malloc(2*num_links[0]*sizeof(int)) * for i from 0 <= i < num_links[0]: * self._unlink(self.links.arr[start + i], sent_links + (2*i), sent_links + (2*i) + 1) # <<<<<<<<<<<<<< @@ -10799,7 +10794,7 @@ static int *__pyx_f_3_sa_9Alignment__get_sent_links(struct __pyx_obj_3_sa_Alignm __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":43 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":43 * for i from 0 <= i < num_links[0]: * self._unlink(self.links.arr[start + i], sent_links + (2*i), sent_links + (2*i) + 1) * return sent_links # <<<<<<<<<<<<<< @@ -10832,7 +10827,7 @@ static int __pyx_pw_3_sa_9Alignment_5__cinit__(PyObject *__pyx_v_self, PyObject static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__from_binary,&__pyx_n_s__from_text,0}; PyObject* values[2] = {0,0}; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":45 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":45 * return sent_links * * def __cinit__(self, from_binary=None, from_text=None): # <<<<<<<<<<<<<< @@ -10902,7 +10897,7 @@ static int __pyx_pf_3_sa_9Alignment_4__cinit__(struct __pyx_obj_3_sa_Alignment * int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":46 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":46 * * def __cinit__(self, from_binary=None, from_text=None): * self.links = IntList(1000,1000) # <<<<<<<<<<<<<< @@ -10917,7 +10912,7 @@ static int __pyx_pf_3_sa_9Alignment_4__cinit__(struct __pyx_obj_3_sa_Alignment * __pyx_v_self->links = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":47 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":47 * def __cinit__(self, from_binary=None, from_text=None): * self.links = IntList(1000,1000) * self.sent_index = IntList(1000,1000) # <<<<<<<<<<<<<< @@ -10932,7 +10927,7 @@ static int __pyx_pf_3_sa_9Alignment_4__cinit__(struct __pyx_obj_3_sa_Alignment * __pyx_v_self->sent_index = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":48 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":48 * self.links = IntList(1000,1000) * self.sent_index = IntList(1000,1000) * if from_binary: # <<<<<<<<<<<<<< @@ -10942,7 +10937,7 @@ static int __pyx_pf_3_sa_9Alignment_4__cinit__(struct __pyx_obj_3_sa_Alignment * __pyx_t_2 = __Pyx_PyObject_IsTrue(__pyx_v_from_binary); if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 48; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":49 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":49 * self.sent_index = IntList(1000,1000) * if from_binary: * self.read_binary(from_binary) # <<<<<<<<<<<<<< @@ -10964,7 +10959,7 @@ static int __pyx_pf_3_sa_9Alignment_4__cinit__(struct __pyx_obj_3_sa_Alignment * goto __pyx_L3; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":50 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":50 * if from_binary: * self.read_binary(from_binary) * elif from_text: # <<<<<<<<<<<<<< @@ -10974,7 +10969,7 @@ static int __pyx_pf_3_sa_9Alignment_4__cinit__(struct __pyx_obj_3_sa_Alignment * __pyx_t_2 = __Pyx_PyObject_IsTrue(__pyx_v_from_text); if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 50; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":51 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":51 * self.read_binary(from_binary) * elif from_text: * self.read_text(from_text) # <<<<<<<<<<<<<< @@ -11031,7 +11026,7 @@ static PyObject *__pyx_pw_3_sa_9Alignment_7read_text(PyObject *__pyx_v_self, PyO return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":53 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":53 * self.read_text(from_text) * * def read_text(self, char* filename): # <<<<<<<<<<<<<< @@ -11073,7 +11068,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_6read_text(struct __pyx_obj_3_sa_Align int __pyx_clineno = 0; __Pyx_RefNannySetupContext("read_text", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":54 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":54 * * def read_text(self, char* filename): * with gzip_or_text(filename) as f: # <<<<<<<<<<<<<< @@ -11113,7 +11108,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_6read_text(struct __pyx_obj_3_sa_Align __pyx_v_f = __pyx_t_1; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":55 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":55 * def read_text(self, char* filename): * with gzip_or_text(filename) as f: * for line in f: # <<<<<<<<<<<<<< @@ -11158,7 +11153,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_6read_text(struct __pyx_obj_3_sa_Align __pyx_v_line = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":56 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":56 * with gzip_or_text(filename) as f: * for line in f: * self.sent_index.append(len(self.links)) # <<<<<<<<<<<<<< @@ -11176,7 +11171,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_6read_text(struct __pyx_obj_3_sa_Align __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":57 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":57 * for line in f: * self.sent_index.append(len(self.links)) * pairs = line.split() # <<<<<<<<<<<<<< @@ -11192,7 +11187,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_6read_text(struct __pyx_obj_3_sa_Align __pyx_v_pairs = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":58 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":58 * self.sent_index.append(len(self.links)) * pairs = line.split() * for pair in pairs: # <<<<<<<<<<<<<< @@ -11237,7 +11232,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_6read_text(struct __pyx_obj_3_sa_Align __pyx_v_pair = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":59 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":59 * pairs = line.split() * for pair in pairs: * (i, j) = map(int, pair.split('-')) # <<<<<<<<<<<<<< @@ -11316,7 +11311,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_6read_text(struct __pyx_obj_3_sa_Align __pyx_v_j = __pyx_t_13; __pyx_t_13 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":60 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":60 * for pair in pairs: * (i, j) = map(int, pair.split('-')) * self.links.append(self.link(i, j)) # <<<<<<<<<<<<<< @@ -11336,7 +11331,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_6read_text(struct __pyx_obj_3_sa_Align } __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":61 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":61 * (i, j) = map(int, pair.split('-')) * self.links.append(self.link(i, j)) * self.sent_index.append(len(self.links)) # <<<<<<<<<<<<<< @@ -11366,7 +11361,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_6read_text(struct __pyx_obj_3_sa_Align __Pyx_XDECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":54 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":54 * * def read_text(self, char* filename): * with gzip_or_text(filename) as f: # <<<<<<<<<<<<<< @@ -11490,7 +11485,7 @@ static PyObject *__pyx_pw_3_sa_9Alignment_9read_binary(PyObject *__pyx_v_self, P return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":63 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":63 * self.sent_index.append(len(self.links)) * * def read_binary(self, char* filename): # <<<<<<<<<<<<<< @@ -11504,7 +11499,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_8read_binary(struct __pyx_obj_3_sa_Ali __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("read_binary", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":65 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":65 * def read_binary(self, char* filename): * cdef FILE* f * f = fopen(filename, "r") # <<<<<<<<<<<<<< @@ -11513,7 +11508,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_8read_binary(struct __pyx_obj_3_sa_Ali */ __pyx_v_f = fopen(__pyx_v_filename, __pyx_k__r); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":66 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":66 * cdef FILE* f * f = fopen(filename, "r") * self.links.read_handle(f) # <<<<<<<<<<<<<< @@ -11522,7 +11517,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_8read_binary(struct __pyx_obj_3_sa_Ali */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->links->__pyx_vtab)->read_handle(__pyx_v_self->links, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":67 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":67 * f = fopen(filename, "r") * self.links.read_handle(f) * self.sent_index.read_handle(f) # <<<<<<<<<<<<<< @@ -11531,7 +11526,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_8read_binary(struct __pyx_obj_3_sa_Ali */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->sent_index->__pyx_vtab)->read_handle(__pyx_v_self->sent_index, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":68 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":68 * self.links.read_handle(f) * self.sent_index.read_handle(f) * fclose(f) # <<<<<<<<<<<<<< @@ -11567,7 +11562,7 @@ static PyObject *__pyx_pw_3_sa_9Alignment_11write_text(PyObject *__pyx_v_self, P return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":70 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":70 * fclose(f) * * def write_text(self, char* filename): # <<<<<<<<<<<<<< @@ -11602,7 +11597,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_10write_text(struct __pyx_obj_3_sa_Ali int __pyx_clineno = 0; __Pyx_RefNannySetupContext("write_text", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":71 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":71 * * def write_text(self, char* filename): * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -11642,7 +11637,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_10write_text(struct __pyx_obj_3_sa_Ali __pyx_v_f = __pyx_t_4; __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":72 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":72 * def write_text(self, char* filename): * with open(filename, "w") as f: * sent_num = 0 # <<<<<<<<<<<<<< @@ -11652,7 +11647,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_10write_text(struct __pyx_obj_3_sa_Ali __Pyx_INCREF(__pyx_int_0); __pyx_v_sent_num = __pyx_int_0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":73 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":73 * with open(filename, "w") as f: * sent_num = 0 * for i, link in enumerate(self.links): # <<<<<<<<<<<<<< @@ -11707,7 +11702,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_10write_text(struct __pyx_obj_3_sa_Ali __pyx_t_4 = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":74 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":74 * sent_num = 0 * for i, link in enumerate(self.links): * while i >= self.sent_index[sent_num]: # <<<<<<<<<<<<<< @@ -11723,7 +11718,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_10write_text(struct __pyx_obj_3_sa_Ali __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; if (!__pyx_t_11) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":75 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":75 * for i, link in enumerate(self.links): * while i >= self.sent_index[sent_num]: * f.write("\n") # <<<<<<<<<<<<<< @@ -11737,7 +11732,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_10write_text(struct __pyx_obj_3_sa_Ali __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":76 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":76 * while i >= self.sent_index[sent_num]: * f.write("\n") * sent_num = sent_num + 1 # <<<<<<<<<<<<<< @@ -11751,7 +11746,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_10write_text(struct __pyx_obj_3_sa_Ali __pyx_t_2 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":77 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":77 * f.write("\n") * sent_num = sent_num + 1 * f.write("%d-%d " % self.unlink(link)) # <<<<<<<<<<<<<< @@ -11788,7 +11783,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_10write_text(struct __pyx_obj_3_sa_Ali __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":78 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":78 * sent_num = sent_num + 1 * f.write("%d-%d " % self.unlink(link)) * f.write("\n") # <<<<<<<<<<<<<< @@ -11814,7 +11809,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_10write_text(struct __pyx_obj_3_sa_Ali __Pyx_XDECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_XDECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":71 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":71 * * def write_text(self, char* filename): * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -11936,7 +11931,7 @@ static PyObject *__pyx_pw_3_sa_9Alignment_13write_binary(PyObject *__pyx_v_self, return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":80 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":80 * f.write("\n") * * def write_binary(self, char* filename): # <<<<<<<<<<<<<< @@ -11950,7 +11945,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_12write_binary(struct __pyx_obj_3_sa_A __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("write_binary", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":82 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":82 * def write_binary(self, char* filename): * cdef FILE* f * f = fopen(filename, "w") # <<<<<<<<<<<<<< @@ -11959,7 +11954,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_12write_binary(struct __pyx_obj_3_sa_A */ __pyx_v_f = fopen(__pyx_v_filename, __pyx_k__w); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":83 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":83 * cdef FILE* f * f = fopen(filename, "w") * self.links.write_handle(f) # <<<<<<<<<<<<<< @@ -11968,7 +11963,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_12write_binary(struct __pyx_obj_3_sa_A */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->links->__pyx_vtab)->write_handle(__pyx_v_self->links, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":84 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":84 * f = fopen(filename, "w") * self.links.write_handle(f) * self.sent_index.write_handle(f) # <<<<<<<<<<<<<< @@ -11977,7 +11972,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_12write_binary(struct __pyx_obj_3_sa_A */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->sent_index->__pyx_vtab)->write_handle(__pyx_v_self->sent_index, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":85 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":85 * self.links.write_handle(f) * self.sent_index.write_handle(f) * fclose(f) # <<<<<<<<<<<<<< @@ -12013,7 +12008,7 @@ static PyObject *__pyx_pw_3_sa_9Alignment_15write_enhanced(PyObject *__pyx_v_sel return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":87 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":87 * fclose(f) * * def write_enhanced(self, char* filename): # <<<<<<<<<<<<<< @@ -12046,7 +12041,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_14write_enhanced(struct __pyx_obj_3_sa int __pyx_clineno = 0; 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__pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":91 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":91 * sent_num = 1 * for link in self.links: * f.write("%d " % link) # <<<<<<<<<<<<<< @@ -12164,7 +12159,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_14write_enhanced(struct __pyx_obj_3_sa } __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":92 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":92 * for link in self.links: * f.write("%d " % link) * f.write("\n") # <<<<<<<<<<<<<< @@ -12178,7 +12173,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_14write_enhanced(struct __pyx_obj_3_sa __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":93 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":93 * f.write("%d " % link) * f.write("\n") * for i in self.sent_index: # <<<<<<<<<<<<<< @@ -12223,7 +12218,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_14write_enhanced(struct __pyx_obj_3_sa __pyx_v_i = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":94 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":94 * f.write("\n") * for i in self.sent_index: * f.write("%d " % i) # <<<<<<<<<<<<<< @@ -12247,7 +12242,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_14write_enhanced(struct __pyx_obj_3_sa } __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":95 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":95 * for i in self.sent_index: * f.write("%d " % i) * f.write("\n") # <<<<<<<<<<<<<< @@ -12271,7 +12266,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_14write_enhanced(struct __pyx_obj_3_sa __Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_XDECREF(__pyx_t_10); __pyx_t_10 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":88 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":88 * * def write_enhanced(self, char* filename): * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -12381,7 +12376,7 @@ static PyObject *__pyx_pw_3_sa_9Alignment_17alignment(PyObject *__pyx_v_self, Py return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":97 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":97 * f.write("\n") * * def alignment(self, i): # <<<<<<<<<<<<<< @@ -12407,7 +12402,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_16alignment(struct __pyx_obj_3_sa_Alig int __pyx_clineno = 0; __Pyx_RefNannySetupContext("alignment", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":100 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":100 * """Return all (e,f) pairs for sentence i""" * cdef int j, start, end * result = [] # <<<<<<<<<<<<<< @@ -12419,7 +12414,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_16alignment(struct __pyx_obj_3_sa_Alig __pyx_v_result = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":101 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":101 * cdef int j, start, end * result = [] * start = self.sent_index.arr[i] # <<<<<<<<<<<<<< @@ -12429,7 +12424,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_16alignment(struct __pyx_obj_3_sa_Alig __pyx_t_2 = __Pyx_PyIndex_AsSsize_t(__pyx_v_i); if (unlikely((__pyx_t_2 == (Py_ssize_t)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 101; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_start = (__pyx_v_self->sent_index->arr[__pyx_t_2]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":102 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":102 * result = [] * start = self.sent_index.arr[i] * end = self.sent_index.arr[i+1] # <<<<<<<<<<<<<< @@ -12442,7 +12437,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_16alignment(struct __pyx_obj_3_sa_Alig __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_v_end = (__pyx_v_self->sent_index->arr[__pyx_t_2]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":103 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":103 * start = self.sent_index.arr[i] * end = self.sent_index.arr[i+1] * for j from start <= j < end: # <<<<<<<<<<<<<< @@ -12452,7 +12447,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_16alignment(struct __pyx_obj_3_sa_Alig __pyx_t_3 = __pyx_v_end; for (__pyx_v_j = __pyx_v_start; __pyx_v_j < __pyx_t_3; __pyx_v_j++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":104 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":104 * end = self.sent_index.arr[i+1] * for j from start <= j < end: * result.append(self.unlink(self.links.arr[j])) # <<<<<<<<<<<<<< @@ -12475,7 +12470,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_16alignment(struct __pyx_obj_3_sa_Alig __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":105 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":105 * for j from start <= j < end: * result.append(self.unlink(self.links.arr[j])) * return result # <<<<<<<<<<<<<< @@ -12500,7 +12495,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_16alignment(struct __pyx_obj_3_sa_Alig return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":15 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":15 * int val * * cdef _node* new_node(int key): # <<<<<<<<<<<<<< @@ -12514,7 +12509,7 @@ static struct __pyx_t_3_sa__node *__pyx_f_3_sa_new_node(int __pyx_v_key) { __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("new_node", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":17 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":17 * cdef _node* new_node(int key): * cdef _node* n * n = <_node*> malloc(sizeof(_node)) # <<<<<<<<<<<<<< @@ -12523,7 +12518,7 @@ static struct __pyx_t_3_sa__node *__pyx_f_3_sa_new_node(int __pyx_v_key) { */ __pyx_v_n = ((struct __pyx_t_3_sa__node *)malloc((sizeof(struct __pyx_t_3_sa__node)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":18 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":18 * cdef _node* n * n = <_node*> malloc(sizeof(_node)) * n.smaller = NULL # <<<<<<<<<<<<<< @@ -12532,7 +12527,7 @@ static struct __pyx_t_3_sa__node *__pyx_f_3_sa_new_node(int __pyx_v_key) { */ __pyx_v_n->smaller = NULL; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":19 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":19 * n = <_node*> malloc(sizeof(_node)) * n.smaller = NULL * n.bigger = NULL # <<<<<<<<<<<<<< @@ -12541,7 +12536,7 @@ static struct __pyx_t_3_sa__node *__pyx_f_3_sa_new_node(int __pyx_v_key) { */ __pyx_v_n->bigger = NULL; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":20 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":20 * n.smaller = NULL * n.bigger = NULL * n.key = key # <<<<<<<<<<<<<< @@ -12550,7 +12545,7 @@ static struct __pyx_t_3_sa__node *__pyx_f_3_sa_new_node(int __pyx_v_key) { */ __pyx_v_n->key = __pyx_v_key; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":21 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":21 * n.bigger = NULL * n.key = key * n.val = 0 # <<<<<<<<<<<<<< @@ -12559,7 +12554,7 @@ static struct __pyx_t_3_sa__node *__pyx_f_3_sa_new_node(int __pyx_v_key) { */ __pyx_v_n->val = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":22 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":22 * n.key = key * n.val = 0 * return n # <<<<<<<<<<<<<< @@ -12575,7 +12570,7 @@ static struct __pyx_t_3_sa__node *__pyx_f_3_sa_new_node(int __pyx_v_key) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":25 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":25 * * * cdef del_node(_node* n): # <<<<<<<<<<<<<< @@ -12593,7 +12588,7 @@ static PyObject *__pyx_f_3_sa_del_node(struct __pyx_t_3_sa__node *__pyx_v_n) { int __pyx_clineno = 0; __Pyx_RefNannySetupContext("del_node", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":26 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":26 * * cdef del_node(_node* n): * if n.smaller != NULL: # <<<<<<<<<<<<<< @@ -12603,7 +12598,7 @@ static PyObject *__pyx_f_3_sa_del_node(struct __pyx_t_3_sa__node *__pyx_v_n) { __pyx_t_1 = (__pyx_v_n->smaller != NULL); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":27 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":27 * cdef del_node(_node* n): * if n.smaller != NULL: * del_node(n.smaller) # <<<<<<<<<<<<<< @@ -12617,7 +12612,7 @@ static PyObject *__pyx_f_3_sa_del_node(struct __pyx_t_3_sa__node *__pyx_v_n) { } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":28 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":28 * if n.smaller != NULL: * del_node(n.smaller) * if n.bigger != NULL: # <<<<<<<<<<<<<< @@ -12627,7 +12622,7 @@ static PyObject *__pyx_f_3_sa_del_node(struct __pyx_t_3_sa__node *__pyx_v_n) { __pyx_t_1 = (__pyx_v_n->bigger != NULL); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":29 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":29 * del_node(n.smaller) * if n.bigger != NULL: * del_node(n.bigger) # <<<<<<<<<<<<<< @@ -12641,7 +12636,7 @@ static PyObject *__pyx_f_3_sa_del_node(struct __pyx_t_3_sa__node *__pyx_v_n) { } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":30 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":30 * if n.bigger != NULL: * del_node(n.bigger) * free(n) # <<<<<<<<<<<<<< @@ -12662,7 +12657,7 @@ static PyObject *__pyx_f_3_sa_del_node(struct __pyx_t_3_sa__node *__pyx_v_n) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":32 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":32 * free(n) * * cdef int* get_val(_node* n, int key): # <<<<<<<<<<<<<< @@ -12676,7 +12671,7 @@ static int *__pyx_f_3_sa_get_val(struct __pyx_t_3_sa__node *__pyx_v_n, int __pyx int __pyx_t_1; __Pyx_RefNannySetupContext("get_val", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":33 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":33 * * cdef int* get_val(_node* n, int key): * if key == n.key: # <<<<<<<<<<<<<< @@ -12686,7 +12681,7 @@ static int *__pyx_f_3_sa_get_val(struct __pyx_t_3_sa__node *__pyx_v_n, int __pyx __pyx_t_1 = (__pyx_v_key == __pyx_v_n->key); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":34 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":34 * cdef int* get_val(_node* n, int key): * if key == n.key: * return &n.val # <<<<<<<<<<<<<< @@ -12698,7 +12693,7 @@ static int *__pyx_f_3_sa_get_val(struct __pyx_t_3_sa__node *__pyx_v_n, int __pyx goto __pyx_L3; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":35 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":35 * if key == n.key: * return &n.val * elif key < n.key: # <<<<<<<<<<<<<< @@ -12708,7 +12703,7 @@ static int *__pyx_f_3_sa_get_val(struct __pyx_t_3_sa__node *__pyx_v_n, int __pyx __pyx_t_1 = (__pyx_v_key < __pyx_v_n->key); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":36 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":36 * return &n.val * elif key < n.key: * if n.smaller == NULL: # <<<<<<<<<<<<<< @@ -12718,7 +12713,7 @@ static int *__pyx_f_3_sa_get_val(struct __pyx_t_3_sa__node *__pyx_v_n, int __pyx __pyx_t_1 = (__pyx_v_n->smaller == NULL); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":37 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":37 * elif key < n.key: * if n.smaller == NULL: * n.smaller = new_node(key) # <<<<<<<<<<<<<< @@ -12727,7 +12722,7 @@ static int *__pyx_f_3_sa_get_val(struct __pyx_t_3_sa__node *__pyx_v_n, int __pyx */ __pyx_v_n->smaller = __pyx_f_3_sa_new_node(__pyx_v_key); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":38 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":38 * if n.smaller == NULL: * n.smaller = new_node(key) * return &(n.smaller.val) # <<<<<<<<<<<<<< @@ -12740,7 +12735,7 @@ static int *__pyx_f_3_sa_get_val(struct __pyx_t_3_sa__node *__pyx_v_n, int __pyx } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":39 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":39 * n.smaller = new_node(key) * return &(n.smaller.val) * return get_val(n.smaller, key) # <<<<<<<<<<<<<< @@ -12753,7 +12748,7 @@ static int *__pyx_f_3_sa_get_val(struct __pyx_t_3_sa__node *__pyx_v_n, int __pyx } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":41 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":41 * return get_val(n.smaller, key) * else: * if n.bigger == NULL: # <<<<<<<<<<<<<< @@ -12763,7 +12758,7 @@ static int *__pyx_f_3_sa_get_val(struct __pyx_t_3_sa__node *__pyx_v_n, int __pyx __pyx_t_1 = (__pyx_v_n->bigger == NULL); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":42 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":42 * else: * if n.bigger == NULL: * n.bigger = new_node(key) # <<<<<<<<<<<<<< @@ -12772,7 +12767,7 @@ static int *__pyx_f_3_sa_get_val(struct __pyx_t_3_sa__node *__pyx_v_n, int __pyx */ __pyx_v_n->bigger = __pyx_f_3_sa_new_node(__pyx_v_key); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":43 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":43 * if n.bigger == NULL: * n.bigger = new_node(key) * return &(n.bigger.val) # <<<<<<<<<<<<<< @@ -12785,7 +12780,7 @@ static int *__pyx_f_3_sa_get_val(struct __pyx_t_3_sa__node *__pyx_v_n, int __pyx } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":44 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":44 * n.bigger = new_node(key) * return &(n.bigger.val) * return get_val(n.bigger, key) # <<<<<<<<<<<<<< @@ -12819,7 +12814,7 @@ static int __pyx_pw_3_sa_5BiLex_1__cinit__(PyObject *__pyx_v_self, PyObject *__p static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__from_text,&__pyx_n_s__from_data,&__pyx_n_s__from_binary,&__pyx_n_s__earray,&__pyx_n_s__fsarray,&__pyx_n_s__alignment,0}; PyObject* values[6] = {0,0,0,0,0,0}; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":54 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":54 * cdef id2eword, id2fword, eword2id, fword2id * * def __cinit__(self, from_text=None, from_data=False, from_binary=None, # <<<<<<<<<<<<<< @@ -12830,7 +12825,7 @@ static int __pyx_pw_3_sa_5BiLex_1__cinit__(PyObject *__pyx_v_self, PyObject *__p values[1] = __pyx_k_41; values[2] = ((PyObject *)Py_None); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":55 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":55 * * def __cinit__(self, from_text=None, from_data=False, from_binary=None, * earray=None, fsarray=None, alignment=None): # <<<<<<<<<<<<<< @@ -12921,7 +12916,7 @@ static int __pyx_pw_3_sa_5BiLex_1__cinit__(PyObject *__pyx_v_self, PyObject *__p return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":54 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":54 * cdef id2eword, id2fword, eword2id, fword2id * * def __cinit__(self, from_text=None, from_data=False, from_binary=None, # <<<<<<<<<<<<<< @@ -12942,7 +12937,7 @@ static int __pyx_pf_3_sa_5BiLex___cinit__(struct __pyx_obj_3_sa_BiLex *__pyx_v_s int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":56 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":56 * def __cinit__(self, from_text=None, from_data=False, from_binary=None, * earray=None, fsarray=None, alignment=None): * self.id2eword = [] # <<<<<<<<<<<<<< @@ -12957,7 +12952,7 @@ static int __pyx_pf_3_sa_5BiLex___cinit__(struct __pyx_obj_3_sa_BiLex *__pyx_v_s __pyx_v_self->id2eword = ((PyObject *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":57 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":57 * earray=None, fsarray=None, alignment=None): * self.id2eword = [] * self.id2fword = [] # <<<<<<<<<<<<<< @@ -12972,7 +12967,7 @@ static int __pyx_pf_3_sa_5BiLex___cinit__(struct __pyx_obj_3_sa_BiLex *__pyx_v_s __pyx_v_self->id2fword = ((PyObject *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":58 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":58 * self.id2eword = [] * self.id2fword = [] * self.eword2id = {} # <<<<<<<<<<<<<< @@ -12987,7 +12982,7 @@ static int __pyx_pf_3_sa_5BiLex___cinit__(struct __pyx_obj_3_sa_BiLex *__pyx_v_s __pyx_v_self->eword2id = ((PyObject *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":59 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":59 * self.id2fword = [] * self.eword2id = {} * self.fword2id = {} # <<<<<<<<<<<<<< @@ -13002,7 +12997,7 @@ static int __pyx_pf_3_sa_5BiLex___cinit__(struct __pyx_obj_3_sa_BiLex *__pyx_v_s __pyx_v_self->fword2id = ((PyObject *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":60 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":60 * self.eword2id = {} * self.fword2id = {} * self.e_index = IntList() # <<<<<<<<<<<<<< @@ -13017,7 +13012,7 @@ static int __pyx_pf_3_sa_5BiLex___cinit__(struct __pyx_obj_3_sa_BiLex *__pyx_v_s __pyx_v_self->e_index = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":61 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":61 * self.fword2id = {} * self.e_index = IntList() * self.f_index = IntList() # <<<<<<<<<<<<<< @@ -13032,7 +13027,7 @@ static int __pyx_pf_3_sa_5BiLex___cinit__(struct __pyx_obj_3_sa_BiLex *__pyx_v_s __pyx_v_self->f_index = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":62 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":62 * self.e_index = IntList() * self.f_index = IntList() * self.col1 = FloatList() # <<<<<<<<<<<<<< @@ -13047,7 +13042,7 @@ static int __pyx_pf_3_sa_5BiLex___cinit__(struct __pyx_obj_3_sa_BiLex *__pyx_v_s __pyx_v_self->col1 = ((struct __pyx_obj_3_sa_FloatList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":63 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":63 * self.f_index = IntList() * self.col1 = FloatList() * self.col2 = FloatList() # <<<<<<<<<<<<<< @@ -13062,7 +13057,7 @@ static int __pyx_pf_3_sa_5BiLex___cinit__(struct __pyx_obj_3_sa_BiLex *__pyx_v_s __pyx_v_self->col2 = ((struct __pyx_obj_3_sa_FloatList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":64 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":64 * self.col1 = FloatList() * self.col2 = FloatList() * if from_binary: # <<<<<<<<<<<<<< @@ -13072,7 +13067,7 @@ static int __pyx_pf_3_sa_5BiLex___cinit__(struct __pyx_obj_3_sa_BiLex *__pyx_v_s __pyx_t_2 = __Pyx_PyObject_IsTrue(__pyx_v_from_binary); if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 64; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":65 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":65 * self.col2 = FloatList() * if from_binary: * self.read_binary(from_binary) # <<<<<<<<<<<<<< @@ -13094,7 +13089,7 @@ static int __pyx_pf_3_sa_5BiLex___cinit__(struct __pyx_obj_3_sa_BiLex *__pyx_v_s goto __pyx_L3; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":66 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":66 * if from_binary: * self.read_binary(from_binary) * elif from_data: # <<<<<<<<<<<<<< @@ -13104,7 +13099,7 @@ static int __pyx_pf_3_sa_5BiLex___cinit__(struct __pyx_obj_3_sa_BiLex *__pyx_v_s __pyx_t_2 = __Pyx_PyObject_IsTrue(__pyx_v_from_data); if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 66; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":67 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":67 * self.read_binary(from_binary) * elif from_data: * self.compute_from_data(fsarray, earray, alignment) # <<<<<<<<<<<<<< @@ -13130,7 +13125,7 @@ static int __pyx_pf_3_sa_5BiLex___cinit__(struct __pyx_obj_3_sa_BiLex *__pyx_v_s } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":69 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":69 * self.compute_from_data(fsarray, earray, alignment) * else: * self.read_text(from_text) # <<<<<<<<<<<<<< @@ -13166,7 +13161,7 @@ static int __pyx_pf_3_sa_5BiLex___cinit__(struct __pyx_obj_3_sa_BiLex *__pyx_v_s return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":72 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":72 * * * cdef compute_from_data(self, SuffixArray fsa, DataArray eda, Alignment aa): # <<<<<<<<<<<<<< @@ -13220,7 +13215,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL int __pyx_clineno = 0; __Pyx_RefNannySetupContext("compute_from_data", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":79 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":79 * cdef int null_word * * null_word = 0 # <<<<<<<<<<<<<< @@ -13229,7 +13224,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_null_word = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":80 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":80 * * null_word = 0 * for word in fsa.darray.id2word: # I miss list comprehensions # <<<<<<<<<<<<<< @@ -13274,7 +13269,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_v_word = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":81 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":81 * null_word = 0 * for word in fsa.darray.id2word: # I miss list comprehensions * self.id2fword.append(word) # <<<<<<<<<<<<<< @@ -13287,7 +13282,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL } __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":82 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":82 * for word in fsa.darray.id2word: # I miss list comprehensions * self.id2fword.append(word) * self.id2fword[null_word] = "NULL" # <<<<<<<<<<<<<< @@ -13296,7 +13291,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ if (__Pyx_SetItemInt(__pyx_v_self->id2fword, __pyx_v_null_word, ((PyObject *)__pyx_n_s__NULL), sizeof(int), PyInt_FromLong) < 0) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 82; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":83 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":83 * self.id2fword.append(word) * self.id2fword[null_word] = "NULL" * for id, word in enumerate(self.id2fword): # <<<<<<<<<<<<<< @@ -13351,7 +13346,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_t_1 = __pyx_t_5; __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":84 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":84 * self.id2fword[null_word] = "NULL" * for id, word in enumerate(self.id2fword): * self.fword2id[word] = id # <<<<<<<<<<<<<< @@ -13363,7 +13358,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":86 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":86 * self.fword2id[word] = id * * for word in eda.id2word: # <<<<<<<<<<<<<< @@ -13408,7 +13403,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_v_word = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":87 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":87 * * for word in eda.id2word: * self.id2eword.append(word) # <<<<<<<<<<<<<< @@ -13421,7 +13416,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL } __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":88 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":88 * for word in eda.id2word: * self.id2eword.append(word) * self.id2eword[null_word] = "NULL" # <<<<<<<<<<<<<< @@ -13430,7 +13425,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ if (__Pyx_SetItemInt(__pyx_v_self->id2eword, __pyx_v_null_word, ((PyObject *)__pyx_n_s__NULL), sizeof(int), PyInt_FromLong) < 0) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 88; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":89 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":89 * self.id2eword.append(word) * self.id2eword[null_word] = "NULL" * for id, word in enumerate(self.id2eword): # <<<<<<<<<<<<<< @@ -13485,7 +13480,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_t_1 = __pyx_t_5; __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":90 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":90 * self.id2eword[null_word] = "NULL" * for id, word in enumerate(self.id2eword): * self.eword2id[word] = id # <<<<<<<<<<<<<< @@ -13497,7 +13492,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":92 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":92 * self.eword2id[word] = id * * num_pairs = 0 # <<<<<<<<<<<<<< @@ -13506,7 +13501,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_num_pairs = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":94 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":94 * num_pairs = 0 * * V_E = len(eda.id2word) # <<<<<<<<<<<<<< @@ -13519,7 +13514,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_v_V_E = __pyx_t_2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":95 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":95 * * V_E = len(eda.id2word) * V_F = len(fsa.darray.id2word) # <<<<<<<<<<<<<< @@ -13532,7 +13527,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_v_V_F = __pyx_t_2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":96 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":96 * V_E = len(eda.id2word) * V_F = len(fsa.darray.id2word) * fmargin = <int*> malloc(V_F*sizeof(int)) # <<<<<<<<<<<<<< @@ -13541,7 +13536,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_fmargin = ((int *)malloc((__pyx_v_V_F * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":97 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":97 * V_F = len(fsa.darray.id2word) * fmargin = <int*> malloc(V_F*sizeof(int)) * emargin = <int*> malloc(V_E*sizeof(int)) # <<<<<<<<<<<<<< @@ -13550,7 +13545,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_emargin = ((int *)malloc((__pyx_v_V_E * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":98 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":98 * fmargin = <int*> malloc(V_F*sizeof(int)) * emargin = <int*> malloc(V_E*sizeof(int)) * memset(fmargin, 0, V_F*sizeof(int)) # <<<<<<<<<<<<<< @@ -13559,7 +13554,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ memset(__pyx_v_fmargin, 0, (__pyx_v_V_F * (sizeof(int)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":99 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":99 * emargin = <int*> malloc(V_E*sizeof(int)) * memset(fmargin, 0, V_F*sizeof(int)) * memset(emargin, 0, V_E*sizeof(int)) # <<<<<<<<<<<<<< @@ -13568,7 +13563,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ memset(__pyx_v_emargin, 0, (__pyx_v_V_E * (sizeof(int)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":101 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":101 * memset(emargin, 0, V_E*sizeof(int)) * * dict = <_node**> malloc(V_F*sizeof(_node*)) # <<<<<<<<<<<<<< @@ -13577,7 +13572,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_dict = ((struct __pyx_t_3_sa__node **)malloc((__pyx_v_V_F * (sizeof(struct __pyx_t_3_sa__node *))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":102 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":102 * * dict = <_node**> malloc(V_F*sizeof(_node*)) * memset(dict, 0, V_F*sizeof(_node*)) # <<<<<<<<<<<<<< @@ -13586,7 +13581,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ memset(__pyx_v_dict, 0, (__pyx_v_V_F * (sizeof(struct __pyx_t_3_sa__node *)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":104 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":104 * memset(dict, 0, V_F*sizeof(_node*)) * * num_sents = len(fsa.darray.sent_index) # <<<<<<<<<<<<<< @@ -13602,7 +13597,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_v_num_sents = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":105 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":105 * * num_sents = len(fsa.darray.sent_index) * for sent_id from 0 <= sent_id < num_sents-1: # <<<<<<<<<<<<<< @@ -13615,7 +13610,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; for (__pyx_v_sent_id = 0; __pyx_v_sent_id < __pyx_t_6; __pyx_v_sent_id++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":107 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":107 * for sent_id from 0 <= sent_id < num_sents-1: * * fsent = fsa.darray.data.arr + fsa.darray.sent_index.arr[sent_id] # <<<<<<<<<<<<<< @@ -13624,7 +13619,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_fsent = (__pyx_v_fsa->darray->data->arr + (__pyx_v_fsa->darray->sent_index->arr[__pyx_v_sent_id])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":108 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":108 * * fsent = fsa.darray.data.arr + fsa.darray.sent_index.arr[sent_id] * I = fsa.darray.sent_index.arr[sent_id+1] - fsa.darray.sent_index.arr[sent_id] - 1 # <<<<<<<<<<<<<< @@ -13633,7 +13628,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_I = (((__pyx_v_fsa->darray->sent_index->arr[(__pyx_v_sent_id + 1)]) - (__pyx_v_fsa->darray->sent_index->arr[__pyx_v_sent_id])) - 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":109 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":109 * fsent = fsa.darray.data.arr + fsa.darray.sent_index.arr[sent_id] * I = fsa.darray.sent_index.arr[sent_id+1] - fsa.darray.sent_index.arr[sent_id] - 1 * faligned = <int*> malloc(I*sizeof(int)) # <<<<<<<<<<<<<< @@ -13642,7 +13637,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_faligned = ((int *)malloc((__pyx_v_I * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":110 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":110 * I = fsa.darray.sent_index.arr[sent_id+1] - fsa.darray.sent_index.arr[sent_id] - 1 * faligned = <int*> malloc(I*sizeof(int)) * memset(faligned, 0, I*sizeof(int)) # <<<<<<<<<<<<<< @@ -13651,7 +13646,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ memset(__pyx_v_faligned, 0, (__pyx_v_I * (sizeof(int)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":112 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":112 * memset(faligned, 0, I*sizeof(int)) * * esent = eda.data.arr + eda.sent_index.arr[sent_id] # <<<<<<<<<<<<<< @@ -13660,7 +13655,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_esent = (__pyx_v_eda->data->arr + (__pyx_v_eda->sent_index->arr[__pyx_v_sent_id])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":113 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":113 * * esent = eda.data.arr + eda.sent_index.arr[sent_id] * J = eda.sent_index.arr[sent_id+1] - eda.sent_index.arr[sent_id] - 1 # <<<<<<<<<<<<<< @@ -13669,7 +13664,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_J = (((__pyx_v_eda->sent_index->arr[(__pyx_v_sent_id + 1)]) - (__pyx_v_eda->sent_index->arr[__pyx_v_sent_id])) - 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":114 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":114 * esent = eda.data.arr + eda.sent_index.arr[sent_id] * J = eda.sent_index.arr[sent_id+1] - eda.sent_index.arr[sent_id] - 1 * ealigned = <int*> malloc(J*sizeof(int)) # <<<<<<<<<<<<<< @@ -13678,7 +13673,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_ealigned = ((int *)malloc((__pyx_v_J * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":115 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":115 * J = eda.sent_index.arr[sent_id+1] - eda.sent_index.arr[sent_id] - 1 * ealigned = <int*> malloc(J*sizeof(int)) * memset(ealigned, 0, J*sizeof(int)) # <<<<<<<<<<<<<< @@ -13687,7 +13682,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ memset(__pyx_v_ealigned, 0, (__pyx_v_J * (sizeof(int)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":117 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":117 * memset(ealigned, 0, J*sizeof(int)) * * links = aa._get_sent_links(sent_id, &num_links) # <<<<<<<<<<<<<< @@ -13696,7 +13691,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_links = ((struct __pyx_vtabstruct_3_sa_Alignment *)__pyx_v_aa->__pyx_vtab)->_get_sent_links(__pyx_v_aa, __pyx_v_sent_id, (&__pyx_v_num_links)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":119 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":119 * links = aa._get_sent_links(sent_id, &num_links) * * for l from 0 <= l < num_links: # <<<<<<<<<<<<<< @@ -13706,7 +13701,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_t_7 = __pyx_v_num_links; for (__pyx_v_l = 0; __pyx_v_l < __pyx_t_7; __pyx_v_l++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":120 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":120 * * for l from 0 <= l < num_links: * i = links[l*2] # <<<<<<<<<<<<<< @@ -13715,7 +13710,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_i = (__pyx_v_links[(__pyx_v_l * 2)]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":121 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":121 * for l from 0 <= l < num_links: * i = links[l*2] * j = links[l*2+1] # <<<<<<<<<<<<<< @@ -13724,7 +13719,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_j = (__pyx_v_links[((__pyx_v_l * 2) + 1)]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":122 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":122 * i = links[l*2] * j = links[l*2+1] * if i >= I or j >= J: # <<<<<<<<<<<<<< @@ -13740,7 +13735,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL } if (__pyx_t_10) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":123 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":123 * j = links[l*2+1] * if i >= I or j >= J: * raise Exception("%d-%d out of bounds (I=%d,J=%d) in line %d\n" % (i,j,I,J,sent_id+1)) # <<<<<<<<<<<<<< @@ -13792,7 +13787,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL } __pyx_L15:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":124 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":124 * if i >= I or j >= J: * raise Exception("%d-%d out of bounds (I=%d,J=%d) in line %d\n" % (i,j,I,J,sent_id+1)) * f_i = fsent[i] # <<<<<<<<<<<<<< @@ -13801,7 +13796,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_f_i = (__pyx_v_fsent[__pyx_v_i]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":125 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":125 * raise Exception("%d-%d out of bounds (I=%d,J=%d) in line %d\n" % (i,j,I,J,sent_id+1)) * f_i = fsent[i] * e_j = esent[j] # <<<<<<<<<<<<<< @@ -13810,7 +13805,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_e_j = (__pyx_v_esent[__pyx_v_j]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":126 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":126 * f_i = fsent[i] * e_j = esent[j] * fmargin[f_i] = fmargin[f_i]+1 # <<<<<<<<<<<<<< @@ -13819,7 +13814,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ (__pyx_v_fmargin[__pyx_v_f_i]) = ((__pyx_v_fmargin[__pyx_v_f_i]) + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":127 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":127 * e_j = esent[j] * fmargin[f_i] = fmargin[f_i]+1 * emargin[e_j] = emargin[e_j]+1 # <<<<<<<<<<<<<< @@ -13828,7 +13823,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ (__pyx_v_emargin[__pyx_v_e_j]) = ((__pyx_v_emargin[__pyx_v_e_j]) + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":128 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":128 * fmargin[f_i] = fmargin[f_i]+1 * emargin[e_j] = emargin[e_j]+1 * if dict[f_i] == NULL: # <<<<<<<<<<<<<< @@ -13838,7 +13833,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_t_10 = ((__pyx_v_dict[__pyx_v_f_i]) == NULL); if (__pyx_t_10) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":129 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":129 * emargin[e_j] = emargin[e_j]+1 * if dict[f_i] == NULL: * dict[f_i] = new_node(e_j) # <<<<<<<<<<<<<< @@ -13847,7 +13842,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ (__pyx_v_dict[__pyx_v_f_i]) = __pyx_f_3_sa_new_node(__pyx_v_e_j); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":130 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":130 * if dict[f_i] == NULL: * dict[f_i] = new_node(e_j) * dict[f_i].val = 1 # <<<<<<<<<<<<<< @@ -13856,7 +13851,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ (__pyx_v_dict[__pyx_v_f_i])->val = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":131 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":131 * dict[f_i] = new_node(e_j) * dict[f_i].val = 1 * num_pairs = num_pairs + 1 # <<<<<<<<<<<<<< @@ -13868,7 +13863,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":133 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":133 * num_pairs = num_pairs + 1 * else: * count = get_val(dict[f_i], e_j) # <<<<<<<<<<<<<< @@ -13877,7 +13872,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_count = __pyx_f_3_sa_get_val((__pyx_v_dict[__pyx_v_f_i]), __pyx_v_e_j); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":134 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":134 * else: * count = get_val(dict[f_i], e_j) * if count[0] == 0: # <<<<<<<<<<<<<< @@ -13887,7 +13882,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_t_10 = ((__pyx_v_count[0]) == 0); if (__pyx_t_10) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":135 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":135 * count = get_val(dict[f_i], e_j) * if count[0] == 0: * num_pairs = num_pairs + 1 # <<<<<<<<<<<<<< @@ -13899,7 +13894,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL } __pyx_L17:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":136 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":136 * if count[0] == 0: * num_pairs = num_pairs + 1 * count[0] = count[0] + 1 # <<<<<<<<<<<<<< @@ -13910,7 +13905,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL } __pyx_L16:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":138 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":138 * count[0] = count[0] + 1 * # add count * faligned[i] = 1 # <<<<<<<<<<<<<< @@ -13919,7 +13914,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ (__pyx_v_faligned[__pyx_v_i]) = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":139 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":139 * # add count * faligned[i] = 1 * ealigned[j] = 1 # <<<<<<<<<<<<<< @@ -13929,7 +13924,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL (__pyx_v_ealigned[__pyx_v_j]) = 1; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":140 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":140 * faligned[i] = 1 * ealigned[j] = 1 * for i from 0 <= i < I: # <<<<<<<<<<<<<< @@ -13939,7 +13934,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_t_7 = __pyx_v_I; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_7; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":141 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":141 * ealigned[j] = 1 * for i from 0 <= i < I: * if faligned[i] == 0: # <<<<<<<<<<<<<< @@ -13949,7 +13944,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_t_10 = ((__pyx_v_faligned[__pyx_v_i]) == 0); if (__pyx_t_10) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":142 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":142 * for i from 0 <= i < I: * if faligned[i] == 0: * f_i = fsent[i] # <<<<<<<<<<<<<< @@ -13958,7 +13953,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_f_i = (__pyx_v_fsent[__pyx_v_i]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":143 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":143 * if faligned[i] == 0: * f_i = fsent[i] * fmargin[f_i] = fmargin[f_i] + 1 # <<<<<<<<<<<<<< @@ -13967,7 +13962,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ (__pyx_v_fmargin[__pyx_v_f_i]) = ((__pyx_v_fmargin[__pyx_v_f_i]) + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":144 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":144 * f_i = fsent[i] * fmargin[f_i] = fmargin[f_i] + 1 * emargin[null_word] = emargin[null_word] + 1 # <<<<<<<<<<<<<< @@ -13976,7 +13971,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ (__pyx_v_emargin[__pyx_v_null_word]) = ((__pyx_v_emargin[__pyx_v_null_word]) + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":145 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":145 * fmargin[f_i] = fmargin[f_i] + 1 * emargin[null_word] = emargin[null_word] + 1 * if dict[f_i] == NULL: # <<<<<<<<<<<<<< @@ -13986,7 +13981,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_t_10 = ((__pyx_v_dict[__pyx_v_f_i]) == NULL); if (__pyx_t_10) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":146 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":146 * emargin[null_word] = emargin[null_word] + 1 * if dict[f_i] == NULL: * dict[f_i] = new_node(null_word) # <<<<<<<<<<<<<< @@ -13995,7 +13990,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ (__pyx_v_dict[__pyx_v_f_i]) = __pyx_f_3_sa_new_node(__pyx_v_null_word); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":147 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":147 * if dict[f_i] == NULL: * dict[f_i] = new_node(null_word) * dict[f_i].val = 1 # <<<<<<<<<<<<<< @@ -14004,7 +13999,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ (__pyx_v_dict[__pyx_v_f_i])->val = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":148 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":148 * dict[f_i] = new_node(null_word) * dict[f_i].val = 1 * num_pairs = num_pairs + 1 # <<<<<<<<<<<<<< @@ -14016,7 +14011,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":150 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":150 * num_pairs = num_pairs + 1 * else: * count = get_val(dict[f_i], null_word) # <<<<<<<<<<<<<< @@ -14025,7 +14020,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_count = __pyx_f_3_sa_get_val((__pyx_v_dict[__pyx_v_f_i]), __pyx_v_null_word); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":151 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":151 * else: * count = get_val(dict[f_i], null_word) * if count[0] == 0: # <<<<<<<<<<<<<< @@ -14035,7 +14030,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_t_10 = ((__pyx_v_count[0]) == 0); if (__pyx_t_10) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":152 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":152 * count = get_val(dict[f_i], null_word) * if count[0] == 0: * num_pairs = num_pairs + 1 # <<<<<<<<<<<<<< @@ -14047,7 +14042,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL } __pyx_L22:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":153 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":153 * if count[0] == 0: * num_pairs = num_pairs + 1 * count[0] = count[0] + 1 # <<<<<<<<<<<<<< @@ -14062,7 +14057,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_L20:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":154 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":154 * num_pairs = num_pairs + 1 * count[0] = count[0] + 1 * for j from 0 <= j < J: # <<<<<<<<<<<<<< @@ -14072,7 +14067,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_t_7 = __pyx_v_J; for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_7; __pyx_v_j++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":155 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":155 * count[0] = count[0] + 1 * for j from 0 <= j < J: * if ealigned[j] == 0: # <<<<<<<<<<<<<< @@ -14082,7 +14077,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_t_10 = ((__pyx_v_ealigned[__pyx_v_j]) == 0); if (__pyx_t_10) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":156 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":156 * for j from 0 <= j < J: * if ealigned[j] == 0: * e_j = esent[j] # <<<<<<<<<<<<<< @@ -14091,7 +14086,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_e_j = (__pyx_v_esent[__pyx_v_j]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":157 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":157 * if ealigned[j] == 0: * e_j = esent[j] * fmargin[null_word] = fmargin[null_word] + 1 # <<<<<<<<<<<<<< @@ -14100,7 +14095,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ (__pyx_v_fmargin[__pyx_v_null_word]) = ((__pyx_v_fmargin[__pyx_v_null_word]) + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":158 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":158 * e_j = esent[j] * fmargin[null_word] = fmargin[null_word] + 1 * emargin[e_j] = emargin[e_j] + 1 # <<<<<<<<<<<<<< @@ -14109,7 +14104,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ (__pyx_v_emargin[__pyx_v_e_j]) = ((__pyx_v_emargin[__pyx_v_e_j]) + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":159 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":159 * fmargin[null_word] = fmargin[null_word] + 1 * emargin[e_j] = emargin[e_j] + 1 * if dict[null_word] == NULL: # <<<<<<<<<<<<<< @@ -14119,7 +14114,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_t_10 = ((__pyx_v_dict[__pyx_v_null_word]) == NULL); if (__pyx_t_10) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":160 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":160 * emargin[e_j] = emargin[e_j] + 1 * if dict[null_word] == NULL: * dict[null_word] = new_node(e_j) # <<<<<<<<<<<<<< @@ -14128,7 +14123,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ (__pyx_v_dict[__pyx_v_null_word]) = __pyx_f_3_sa_new_node(__pyx_v_e_j); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":161 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":161 * if dict[null_word] == NULL: * dict[null_word] = new_node(e_j) * dict[null_word].val = 1 # <<<<<<<<<<<<<< @@ -14137,7 +14132,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ (__pyx_v_dict[__pyx_v_null_word])->val = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":162 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":162 * dict[null_word] = new_node(e_j) * dict[null_word].val = 1 * num_pairs = num_pairs + 1 # <<<<<<<<<<<<<< @@ -14149,7 +14144,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":164 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":164 * num_pairs = num_pairs + 1 * else: * count = get_val(dict[null_word], e_j) # <<<<<<<<<<<<<< @@ -14158,7 +14153,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_count = __pyx_f_3_sa_get_val((__pyx_v_dict[__pyx_v_null_word]), __pyx_v_e_j); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":165 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":165 * else: * count = get_val(dict[null_word], e_j) * if count[0] == 0: # <<<<<<<<<<<<<< @@ -14168,7 +14163,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_t_10 = ((__pyx_v_count[0]) == 0); if (__pyx_t_10) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":166 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":166 * count = get_val(dict[null_word], e_j) * if count[0] == 0: * num_pairs = num_pairs + 1 # <<<<<<<<<<<<<< @@ -14180,7 +14175,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL } __pyx_L27:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":167 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":167 * if count[0] == 0: * num_pairs = num_pairs + 1 * count[0] = count[0] + 1 # <<<<<<<<<<<<<< @@ -14195,7 +14190,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_L25:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":168 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":168 * num_pairs = num_pairs + 1 * count[0] = count[0] + 1 * free(links) # <<<<<<<<<<<<<< @@ -14204,7 +14199,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ free(__pyx_v_links); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":169 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":169 * count[0] = count[0] + 1 * free(links) * free(faligned) # <<<<<<<<<<<<<< @@ -14213,7 +14208,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ free(__pyx_v_faligned); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":170 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":170 * free(links) * free(faligned) * free(ealigned) # <<<<<<<<<<<<<< @@ -14223,7 +14218,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL free(__pyx_v_ealigned); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":171 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":171 * free(faligned) * free(ealigned) * self.f_index = IntList(initial_len=V_F) # <<<<<<<<<<<<<< @@ -14245,7 +14240,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_v_self->f_index = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_13); __pyx_t_13 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":172 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":172 * free(ealigned) * self.f_index = IntList(initial_len=V_F) * self.e_index = IntList(initial_len=num_pairs) # <<<<<<<<<<<<<< @@ -14267,7 +14262,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_v_self->e_index = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_12); __pyx_t_12 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":173 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":173 * self.f_index = IntList(initial_len=V_F) * self.e_index = IntList(initial_len=num_pairs) * self.col1 = FloatList(initial_len=num_pairs) # <<<<<<<<<<<<<< @@ -14289,7 +14284,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_v_self->col1 = ((struct __pyx_obj_3_sa_FloatList *)__pyx_t_13); __pyx_t_13 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":174 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":174 * self.e_index = IntList(initial_len=num_pairs) * self.col1 = FloatList(initial_len=num_pairs) * self.col2 = FloatList(initial_len=num_pairs) # <<<<<<<<<<<<<< @@ -14311,7 +14306,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_v_self->col2 = ((struct __pyx_obj_3_sa_FloatList *)__pyx_t_12); __pyx_t_12 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":176 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":176 * self.col2 = FloatList(initial_len=num_pairs) * * num_pairs = 0 # <<<<<<<<<<<<<< @@ -14320,7 +14315,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ __pyx_v_num_pairs = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":177 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":177 * * num_pairs = 0 * for i from 0 <= i < V_F: # <<<<<<<<<<<<<< @@ -14330,7 +14325,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_t_6 = __pyx_v_V_F; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_6; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":179 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":179 * for i from 0 <= i < V_F: * #self.f_index[i] = num_pairs * self.f_index.set(i, num_pairs) # <<<<<<<<<<<<<< @@ -14339,7 +14334,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->f_index->__pyx_vtab)->set(__pyx_v_self->f_index, __pyx_v_i, __pyx_v_num_pairs); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":180 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":180 * #self.f_index[i] = num_pairs * self.f_index.set(i, num_pairs) * if dict[i] != NULL: # <<<<<<<<<<<<<< @@ -14349,7 +14344,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_t_10 = ((__pyx_v_dict[__pyx_v_i]) != NULL); if (__pyx_t_10) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":181 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":181 * self.f_index.set(i, num_pairs) * if dict[i] != NULL: * self._add_node(dict[i], &num_pairs, float(fmargin[i]), emargin) # <<<<<<<<<<<<<< @@ -14360,7 +14355,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __Pyx_GOTREF(__pyx_t_12); __Pyx_DECREF(__pyx_t_12); __pyx_t_12 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":182 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":182 * if dict[i] != NULL: * self._add_node(dict[i], &num_pairs, float(fmargin[i]), emargin) * del_node(dict[i]) # <<<<<<<<<<<<<< @@ -14375,7 +14370,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_L30:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":183 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":183 * self._add_node(dict[i], &num_pairs, float(fmargin[i]), emargin) * del_node(dict[i]) * free(fmargin) # <<<<<<<<<<<<<< @@ -14384,7 +14379,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ free(__pyx_v_fmargin); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":184 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":184 * del_node(dict[i]) * free(fmargin) * free(emargin) # <<<<<<<<<<<<<< @@ -14393,7 +14388,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ free(__pyx_v_emargin); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":185 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":185 * free(fmargin) * free(emargin) * free(dict) # <<<<<<<<<<<<<< @@ -14402,7 +14397,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL */ free(__pyx_v_dict); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":186 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":186 * free(emargin) * free(dict) * return # <<<<<<<<<<<<<< @@ -14433,7 +14428,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":189 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":189 * * * cdef _add_node(self, _node* n, int* num_pairs, float fmargin, int* emargin): # <<<<<<<<<<<<<< @@ -14452,7 +14447,7 @@ static PyObject *__pyx_f_3_sa_5BiLex__add_node(struct __pyx_obj_3_sa_BiLex *__py int __pyx_clineno = 0; __Pyx_RefNannySetupContext("_add_node", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":191 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":191 * cdef _add_node(self, _node* n, int* num_pairs, float fmargin, int* emargin): * cdef int loc * if n.smaller != NULL: # <<<<<<<<<<<<<< @@ -14462,7 +14457,7 @@ static PyObject *__pyx_f_3_sa_5BiLex__add_node(struct __pyx_obj_3_sa_BiLex *__py __pyx_t_1 = (__pyx_v_n->smaller != NULL); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":192 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":192 * cdef int loc * if n.smaller != NULL: * self._add_node(n.smaller, num_pairs, fmargin, emargin) # <<<<<<<<<<<<<< @@ -14476,7 +14471,7 @@ static PyObject *__pyx_f_3_sa_5BiLex__add_node(struct __pyx_obj_3_sa_BiLex *__py } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":193 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":193 * if n.smaller != NULL: * self._add_node(n.smaller, num_pairs, fmargin, emargin) * loc = num_pairs[0] # <<<<<<<<<<<<<< @@ -14485,7 +14480,7 @@ static PyObject *__pyx_f_3_sa_5BiLex__add_node(struct __pyx_obj_3_sa_BiLex *__py */ __pyx_v_loc = (__pyx_v_num_pairs[0]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":194 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":194 * self._add_node(n.smaller, num_pairs, fmargin, emargin) * loc = num_pairs[0] * self.e_index.set(loc, n.key) # <<<<<<<<<<<<<< @@ -14494,7 +14489,7 @@ static PyObject *__pyx_f_3_sa_5BiLex__add_node(struct __pyx_obj_3_sa_BiLex *__py */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->e_index->__pyx_vtab)->set(__pyx_v_self->e_index, __pyx_v_loc, __pyx_v_n->key); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":195 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":195 * loc = num_pairs[0] * self.e_index.set(loc, n.key) * self.col1.set(loc, float(n.val)/fmargin) # <<<<<<<<<<<<<< @@ -14507,7 +14502,7 @@ static PyObject *__pyx_f_3_sa_5BiLex__add_node(struct __pyx_obj_3_sa_BiLex *__py } ((struct __pyx_vtabstruct_3_sa_FloatList *)__pyx_v_self->col1->__pyx_vtab)->set(__pyx_v_self->col1, __pyx_v_loc, (((double)__pyx_v_n->val) / __pyx_v_fmargin)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":196 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":196 * self.e_index.set(loc, n.key) * self.col1.set(loc, float(n.val)/fmargin) * self.col2.set(loc, float(n.val)/float(emargin[n.key])) # <<<<<<<<<<<<<< @@ -14520,7 +14515,7 @@ static PyObject *__pyx_f_3_sa_5BiLex__add_node(struct __pyx_obj_3_sa_BiLex *__py } ((struct __pyx_vtabstruct_3_sa_FloatList *)__pyx_v_self->col2->__pyx_vtab)->set(__pyx_v_self->col2, __pyx_v_loc, (((double)__pyx_v_n->val) / ((double)(__pyx_v_emargin[__pyx_v_n->key])))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":197 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":197 * self.col1.set(loc, float(n.val)/fmargin) * self.col2.set(loc, float(n.val)/float(emargin[n.key])) * num_pairs[0] = loc + 1 # <<<<<<<<<<<<<< @@ -14529,7 +14524,7 @@ static PyObject *__pyx_f_3_sa_5BiLex__add_node(struct __pyx_obj_3_sa_BiLex *__py */ (__pyx_v_num_pairs[0]) = (__pyx_v_loc + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":198 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":198 * self.col2.set(loc, float(n.val)/float(emargin[n.key])) * num_pairs[0] = loc + 1 * if n.bigger != NULL: # <<<<<<<<<<<<<< @@ -14539,7 +14534,7 @@ static PyObject *__pyx_f_3_sa_5BiLex__add_node(struct __pyx_obj_3_sa_BiLex *__py __pyx_t_1 = (__pyx_v_n->bigger != NULL); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":199 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":199 * num_pairs[0] = loc + 1 * if n.bigger != NULL: * self._add_node(n.bigger, num_pairs, fmargin, emargin) # <<<<<<<<<<<<<< @@ -14586,7 +14581,7 @@ static PyObject *__pyx_pw_3_sa_5BiLex_3write_binary(PyObject *__pyx_v_self, PyOb return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":202 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":202 * * * def write_binary(self, char* filename): # <<<<<<<<<<<<<< @@ -14605,7 +14600,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_2write_binary(struct __pyx_obj_3_sa_BiLex int __pyx_clineno = 0; __Pyx_RefNannySetupContext("write_binary", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":204 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":204 * def write_binary(self, char* filename): * cdef FILE* f * f = fopen(filename, "w") # <<<<<<<<<<<<<< @@ -14614,7 +14609,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_2write_binary(struct __pyx_obj_3_sa_BiLex */ __pyx_v_f = fopen(__pyx_v_filename, __pyx_k__w); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":205 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":205 * cdef FILE* f * f = fopen(filename, "w") * self.f_index.write_handle(f) # <<<<<<<<<<<<<< @@ -14623,7 +14618,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_2write_binary(struct __pyx_obj_3_sa_BiLex */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->f_index->__pyx_vtab)->write_handle(__pyx_v_self->f_index, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":206 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":206 * f = fopen(filename, "w") * self.f_index.write_handle(f) * self.e_index.write_handle(f) # <<<<<<<<<<<<<< @@ -14632,7 +14627,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_2write_binary(struct __pyx_obj_3_sa_BiLex */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->e_index->__pyx_vtab)->write_handle(__pyx_v_self->e_index, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":207 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":207 * self.f_index.write_handle(f) * self.e_index.write_handle(f) * self.col1.write_handle(f) # <<<<<<<<<<<<<< @@ -14641,7 +14636,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_2write_binary(struct __pyx_obj_3_sa_BiLex */ ((struct __pyx_vtabstruct_3_sa_FloatList *)__pyx_v_self->col1->__pyx_vtab)->write_handle(__pyx_v_self->col1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":208 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":208 * self.e_index.write_handle(f) * self.col1.write_handle(f) * self.col2.write_handle(f) # <<<<<<<<<<<<<< @@ -14650,7 +14645,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_2write_binary(struct __pyx_obj_3_sa_BiLex */ ((struct __pyx_vtabstruct_3_sa_FloatList *)__pyx_v_self->col2->__pyx_vtab)->write_handle(__pyx_v_self->col2, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":209 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":209 * self.col1.write_handle(f) * self.col2.write_handle(f) * self.write_wordlist(self.id2fword, f) # <<<<<<<<<<<<<< @@ -14664,7 +14659,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_2write_binary(struct __pyx_obj_3_sa_BiLex __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":210 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":210 * self.col2.write_handle(f) * self.write_wordlist(self.id2fword, f) * self.write_wordlist(self.id2eword, f) # <<<<<<<<<<<<<< @@ -14678,7 +14673,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_2write_binary(struct __pyx_obj_3_sa_BiLex __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":211 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":211 * self.write_wordlist(self.id2fword, f) * self.write_wordlist(self.id2eword, f) * fclose(f) # <<<<<<<<<<<<<< @@ -14700,7 +14695,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_2write_binary(struct __pyx_obj_3_sa_BiLex return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":214 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":214 * * * cdef write_wordlist(self, wordlist, FILE* f): # <<<<<<<<<<<<<< @@ -14725,7 +14720,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_write_wordlist(CYTHON_UNUSED struct __pyx_o int __pyx_clineno = 0; __Pyx_RefNannySetupContext("write_wordlist", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":218 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":218 * cdef int num_words * * num_words = len(wordlist) # <<<<<<<<<<<<<< @@ -14735,7 +14730,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_write_wordlist(CYTHON_UNUSED struct __pyx_o __pyx_t_1 = PyObject_Length(__pyx_v_wordlist); if (unlikely(__pyx_t_1 == -1)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_num_words = __pyx_t_1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":219 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":219 * * num_words = len(wordlist) * fwrite(&(num_words), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -14744,7 +14739,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_write_wordlist(CYTHON_UNUSED struct __pyx_o */ fwrite((&__pyx_v_num_words), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":220 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":220 * num_words = len(wordlist) * fwrite(&(num_words), sizeof(int), 1, f) * for word in wordlist: # <<<<<<<<<<<<<< @@ -14789,7 +14784,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_write_wordlist(CYTHON_UNUSED struct __pyx_o __pyx_v_word = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":221 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":221 * fwrite(&(num_words), sizeof(int), 1, f) * for word in wordlist: * word_len = len(word) + 1 # <<<<<<<<<<<<<< @@ -14799,7 +14794,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_write_wordlist(CYTHON_UNUSED struct __pyx_o __pyx_t_5 = PyObject_Length(__pyx_v_word); if (unlikely(__pyx_t_5 == -1)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 221; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_word_len = (__pyx_t_5 + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":222 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":222 * for word in wordlist: * word_len = len(word) + 1 * fwrite(&(word_len), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -14808,7 +14803,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_write_wordlist(CYTHON_UNUSED struct __pyx_o */ fwrite((&__pyx_v_word_len), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":223 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":223 * word_len = len(word) + 1 * fwrite(&(word_len), sizeof(int), 1, f) * fwrite(<char *>word, sizeof(char), word_len, f) # <<<<<<<<<<<<<< @@ -14834,7 +14829,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_write_wordlist(CYTHON_UNUSED struct __pyx_o return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":226 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":226 * * * cdef read_wordlist(self, word2id, id2word, FILE* f): # <<<<<<<<<<<<<< @@ -14858,7 +14853,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_read_wordlist(CYTHON_UNUSED struct __pyx_ob int __pyx_clineno = 0; __Pyx_RefNannySetupContext("read_wordlist", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":231 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":231 * cdef char* word * * fread(&(num_words), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -14867,7 +14862,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_read_wordlist(CYTHON_UNUSED struct __pyx_ob */ fread((&__pyx_v_num_words), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":232 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":232 * * fread(&(num_words), sizeof(int), 1, f) * for i from 0 <= i < num_words: # <<<<<<<<<<<<<< @@ -14877,7 +14872,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_read_wordlist(CYTHON_UNUSED struct __pyx_ob __pyx_t_1 = __pyx_v_num_words; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_1; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":233 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":233 * fread(&(num_words), sizeof(int), 1, f) * for i from 0 <= i < num_words: * fread(&(word_len), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -14886,7 +14881,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_read_wordlist(CYTHON_UNUSED struct __pyx_ob */ fread((&__pyx_v_word_len), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":234 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":234 * for i from 0 <= i < num_words: * fread(&(word_len), sizeof(int), 1, f) * word = <char*> malloc (word_len * sizeof(char)) # <<<<<<<<<<<<<< @@ -14895,7 +14890,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_read_wordlist(CYTHON_UNUSED struct __pyx_ob */ __pyx_v_word = ((char *)malloc((__pyx_v_word_len * (sizeof(char))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":235 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":235 * fread(&(word_len), sizeof(int), 1, f) * word = <char*> malloc (word_len * sizeof(char)) * fread(word, sizeof(char), word_len, f) # <<<<<<<<<<<<<< @@ -14904,7 +14899,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_read_wordlist(CYTHON_UNUSED struct __pyx_ob */ fread(__pyx_v_word, (sizeof(char)), __pyx_v_word_len, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":236 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":236 * word = <char*> malloc (word_len * sizeof(char)) * fread(word, sizeof(char), word_len, f) * word2id[word] = len(id2word) # <<<<<<<<<<<<<< @@ -14920,7 +14915,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_read_wordlist(CYTHON_UNUSED struct __pyx_ob __Pyx_DECREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0; __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":237 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":237 * fread(word, sizeof(char), word_len, f) * word2id[word] = len(id2word) * id2word.append(word) # <<<<<<<<<<<<<< @@ -14934,7 +14929,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_read_wordlist(CYTHON_UNUSED struct __pyx_ob __Pyx_DECREF(((PyObject *)__pyx_t_3)); __pyx_t_3 = 0; __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":238 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":238 * word2id[word] = len(id2word) * id2word.append(word) * free(word) # <<<<<<<<<<<<<< @@ -14978,7 +14973,7 @@ static PyObject *__pyx_pw_3_sa_5BiLex_5read_binary(PyObject *__pyx_v_self, PyObj return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":240 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":240 * free(word) * * def read_binary(self, char* filename): # <<<<<<<<<<<<<< @@ -14998,7 +14993,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_4read_binary(struct __pyx_obj_3_sa_BiLex * int __pyx_clineno = 0; __Pyx_RefNannySetupContext("read_binary", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":242 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":242 * def read_binary(self, char* filename): * cdef FILE* f * f = fopen(filename, "r") # <<<<<<<<<<<<<< @@ -15007,7 +15002,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_4read_binary(struct __pyx_obj_3_sa_BiLex * */ __pyx_v_f = fopen(__pyx_v_filename, __pyx_k__r); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":243 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":243 * cdef FILE* f * f = fopen(filename, "r") * self.f_index.read_handle(f) # <<<<<<<<<<<<<< @@ -15016,7 +15011,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_4read_binary(struct __pyx_obj_3_sa_BiLex * */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->f_index->__pyx_vtab)->read_handle(__pyx_v_self->f_index, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":244 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":244 * f = fopen(filename, "r") * self.f_index.read_handle(f) * self.e_index.read_handle(f) # <<<<<<<<<<<<<< @@ -15025,7 +15020,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_4read_binary(struct __pyx_obj_3_sa_BiLex * */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->e_index->__pyx_vtab)->read_handle(__pyx_v_self->e_index, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":245 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":245 * self.f_index.read_handle(f) * self.e_index.read_handle(f) * self.col1.read_handle(f) # <<<<<<<<<<<<<< @@ -15034,7 +15029,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_4read_binary(struct __pyx_obj_3_sa_BiLex * */ ((struct __pyx_vtabstruct_3_sa_FloatList *)__pyx_v_self->col1->__pyx_vtab)->read_handle(__pyx_v_self->col1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":246 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":246 * self.e_index.read_handle(f) * self.col1.read_handle(f) * self.col2.read_handle(f) # <<<<<<<<<<<<<< @@ -15043,7 +15038,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_4read_binary(struct __pyx_obj_3_sa_BiLex * */ ((struct __pyx_vtabstruct_3_sa_FloatList *)__pyx_v_self->col2->__pyx_vtab)->read_handle(__pyx_v_self->col2, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":247 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":247 * self.col1.read_handle(f) * self.col2.read_handle(f) * self.read_wordlist(self.fword2id, self.id2fword, f) # <<<<<<<<<<<<<< @@ -15060,7 +15055,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_4read_binary(struct __pyx_obj_3_sa_BiLex * __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":248 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":248 * self.col2.read_handle(f) * self.read_wordlist(self.fword2id, self.id2fword, f) * self.read_wordlist(self.eword2id, self.id2eword, f) # <<<<<<<<<<<<<< @@ -15077,7 +15072,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_4read_binary(struct __pyx_obj_3_sa_BiLex * __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":249 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":249 * self.read_wordlist(self.fword2id, self.id2fword, f) * self.read_wordlist(self.eword2id, self.id2eword, f) * fclose(f) # <<<<<<<<<<<<<< @@ -15111,7 +15106,7 @@ static PyObject *__pyx_pw_3_sa_5BiLex_7get_e_id(PyObject *__pyx_v_self, PyObject return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":252 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":252 * * * def get_e_id(self, eword): # <<<<<<<<<<<<<< @@ -15131,7 +15126,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_6get_e_id(struct __pyx_obj_3_sa_BiLex *__p int __pyx_clineno = 0; __Pyx_RefNannySetupContext("get_e_id", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":253 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":253 * * def get_e_id(self, eword): * if eword not in self.eword2id: # <<<<<<<<<<<<<< @@ -15141,7 +15136,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_6get_e_id(struct __pyx_obj_3_sa_BiLex *__p __pyx_t_1 = (__Pyx_PySequence_Contains(__pyx_v_eword, __pyx_v_self->eword2id, Py_NE)); if (unlikely(__pyx_t_1 < 0)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 253; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":254 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":254 * def get_e_id(self, eword): * if eword not in self.eword2id: * e_id = len(self.id2eword) # <<<<<<<<<<<<<< @@ -15157,7 +15152,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_6get_e_id(struct __pyx_obj_3_sa_BiLex *__p __pyx_v_e_id = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":255 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":255 * if eword not in self.eword2id: * e_id = len(self.id2eword) * self.id2eword.append(eword) # <<<<<<<<<<<<<< @@ -15168,7 +15163,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_6get_e_id(struct __pyx_obj_3_sa_BiLex *__p __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":256 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":256 * e_id = len(self.id2eword) * self.id2eword.append(eword) * self.eword2id[eword] = e_id # <<<<<<<<<<<<<< @@ -15180,7 +15175,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_6get_e_id(struct __pyx_obj_3_sa_BiLex *__p } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":257 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":257 * self.id2eword.append(eword) * self.eword2id[eword] = e_id * return self.eword2id[eword] # <<<<<<<<<<<<<< @@ -15218,7 +15213,7 @@ static PyObject *__pyx_pw_3_sa_5BiLex_9get_f_id(PyObject *__pyx_v_self, PyObject return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":260 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":260 * * * def get_f_id(self, fword): # <<<<<<<<<<<<<< @@ -15238,7 +15233,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_8get_f_id(struct __pyx_obj_3_sa_BiLex *__p int __pyx_clineno = 0; __Pyx_RefNannySetupContext("get_f_id", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":261 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":261 * * def get_f_id(self, fword): * if fword not in self.fword2id: # <<<<<<<<<<<<<< @@ -15248,7 +15243,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_8get_f_id(struct __pyx_obj_3_sa_BiLex *__p __pyx_t_1 = (__Pyx_PySequence_Contains(__pyx_v_fword, __pyx_v_self->fword2id, Py_NE)); if (unlikely(__pyx_t_1 < 0)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 261; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":262 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":262 * def get_f_id(self, fword): * if fword not in self.fword2id: * f_id = len(self.id2fword) # <<<<<<<<<<<<<< @@ -15264,7 +15259,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_8get_f_id(struct __pyx_obj_3_sa_BiLex *__p __pyx_v_f_id = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":263 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":263 * if fword not in self.fword2id: * f_id = len(self.id2fword) * self.id2fword.append(fword) # <<<<<<<<<<<<<< @@ -15275,7 +15270,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_8get_f_id(struct __pyx_obj_3_sa_BiLex *__p __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":264 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":264 * f_id = len(self.id2fword) * self.id2fword.append(fword) * self.fword2id[fword] = f_id # <<<<<<<<<<<<<< @@ -15287,7 +15282,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_8get_f_id(struct __pyx_obj_3_sa_BiLex *__p } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":265 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":265 * self.id2fword.append(fword) * self.fword2id[fword] = f_id * return self.fword2id[fword] # <<<<<<<<<<<<<< @@ -15335,7 +15330,7 @@ static PyObject *__pyx_pw_3_sa_5BiLex_11read_text(PyObject *__pyx_v_self, PyObje return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":268 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":268 * * * def read_text(self, char* filename): # <<<<<<<<<<<<<< @@ -15390,7 +15385,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("read_text", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":272 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":272 * cdef IntList fcount * * fcount = IntList() # <<<<<<<<<<<<<< @@ -15402,7 +15397,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_fcount = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":273 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":273 * * fcount = IntList() * with gzip_or_text(filename) as f: # <<<<<<<<<<<<<< @@ -15442,7 +15437,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_f = __pyx_t_1; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":275 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":275 * with gzip_or_text(filename) as f: * # first loop merely establishes size of array objects * for line in f: # <<<<<<<<<<<<<< @@ -15487,7 +15482,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_line = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":276 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":276 * # first loop merely establishes size of array objects * for line in f: * (fword, eword, score1, score2) = line.split() # <<<<<<<<<<<<<< @@ -15573,7 +15568,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_score2 = __pyx_t_12; __pyx_t_12 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":277 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":277 * for line in f: * (fword, eword, score1, score2) = line.split() * f_id = self.get_f_id(fword) # <<<<<<<<<<<<<< @@ -15595,7 +15590,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_f_id = __pyx_t_11; __pyx_t_11 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":278 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":278 * (fword, eword, score1, score2) = line.split() * f_id = self.get_f_id(fword) * e_id = self.get_e_id(eword) # <<<<<<<<<<<<<< @@ -15617,7 +15612,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_e_id = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":279 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":279 * f_id = self.get_f_id(fword) * e_id = self.get_e_id(eword) * while f_id >= len(fcount): # <<<<<<<<<<<<<< @@ -15634,7 +15629,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __Pyx_DECREF(__pyx_t_12); __pyx_t_12 = 0; if (!__pyx_t_16) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":280 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":280 * e_id = self.get_e_id(eword) * while f_id >= len(fcount): * fcount.append(0) # <<<<<<<<<<<<<< @@ -15646,7 +15641,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __Pyx_DECREF(__pyx_t_12); __pyx_t_12 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":281 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":281 * while f_id >= len(fcount): * fcount.append(0) * fcount.arr[f_id] = fcount.arr[f_id] + 1 # <<<<<<<<<<<<<< @@ -15659,7 +15654,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ } __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":284 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":284 * * # Allocate space for dictionary in arrays * N = 0 # <<<<<<<<<<<<<< @@ -15669,7 +15664,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __Pyx_INCREF(__pyx_int_0); __pyx_v_N = __pyx_int_0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":285 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":285 * # Allocate space for dictionary in arrays * N = 0 * n_f = len(fcount) # <<<<<<<<<<<<<< @@ -15682,7 +15677,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_n_f = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":286 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":286 * N = 0 * n_f = len(fcount) * self.f_index = IntList(initial_len=n_f+1) # <<<<<<<<<<<<<< @@ -15704,7 +15699,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_self->f_index = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_12); __pyx_t_12 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":287 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":287 * n_f = len(fcount) * self.f_index = IntList(initial_len=n_f+1) * for i from 0 <= i < n_f: # <<<<<<<<<<<<<< @@ -15719,7 +15714,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_i = __pyx_t_12; __pyx_t_12 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":288 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":288 * self.f_index = IntList(initial_len=n_f+1) * for i from 0 <= i < n_f: * self.f_index.arr[i] = N # <<<<<<<<<<<<<< @@ -15730,7 +15725,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_t_8 = __Pyx_PyIndex_AsSsize_t(__pyx_v_i); if (unlikely((__pyx_t_8 == (Py_ssize_t)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 288; __pyx_clineno = __LINE__; goto __pyx_L7_error;} (__pyx_v_self->f_index->arr[__pyx_t_8]) = __pyx_t_20; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":289 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":289 * for i from 0 <= i < n_f: * self.f_index.arr[i] = N * N = N + fcount.arr[i] # <<<<<<<<<<<<<< @@ -15747,7 +15742,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_N = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":290 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":290 * self.f_index.arr[i] = N * N = N + fcount.arr[i] * fcount.arr[i] = 0 # <<<<<<<<<<<<<< @@ -15759,7 +15754,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_t_19 = __Pyx_PyInt_AsLong(__pyx_v_i); if (unlikely((__pyx_t_19 == (long)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 287; __pyx_clineno = __LINE__; goto __pyx_L7_error;} } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":287 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":287 * n_f = len(fcount) * self.f_index = IntList(initial_len=n_f+1) * for i from 0 <= i < n_f: # <<<<<<<<<<<<<< @@ -15772,7 +15767,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_i = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":291 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":291 * N = N + fcount.arr[i] * fcount.arr[i] = 0 * self.f_index.arr[n_f] = N # <<<<<<<<<<<<<< @@ -15783,7 +15778,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_t_8 = __Pyx_PyIndex_AsSsize_t(__pyx_v_n_f); if (unlikely((__pyx_t_8 == (Py_ssize_t)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 291; __pyx_clineno = __LINE__; goto __pyx_L7_error;} (__pyx_v_self->f_index->arr[__pyx_t_8]) = __pyx_t_20; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":292 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":292 * fcount.arr[i] = 0 * self.f_index.arr[n_f] = N * self.e_index = IntList(initial_len=N) # <<<<<<<<<<<<<< @@ -15802,7 +15797,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_self->e_index = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_12); __pyx_t_12 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":293 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":293 * self.f_index.arr[n_f] = N * self.e_index = IntList(initial_len=N) * self.col1 = FloatList(initial_len=N) # <<<<<<<<<<<<<< @@ -15821,7 +15816,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_self->col1 = ((struct __pyx_obj_3_sa_FloatList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":294 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":294 * self.e_index = IntList(initial_len=N) * self.col1 = FloatList(initial_len=N) * self.col2 = FloatList(initial_len=N) # <<<<<<<<<<<<<< @@ -15840,7 +15835,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_self->col2 = ((struct __pyx_obj_3_sa_FloatList *)__pyx_t_12); __pyx_t_12 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":297 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":297 * * # Re-read file, placing words into buckets * f.seek(0) # <<<<<<<<<<<<<< @@ -15854,7 +15849,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __Pyx_DECREF(__pyx_t_12); __pyx_t_12 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":298 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":298 * # Re-read file, placing words into buckets * f.seek(0) * for line in f: # <<<<<<<<<<<<<< @@ -15899,7 +15894,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_line = __pyx_t_12; __pyx_t_12 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":299 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":299 * f.seek(0) * for line in f: * (fword, eword, score1, score2) = line.split() # <<<<<<<<<<<<<< @@ -15985,7 +15980,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_score2 = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":300 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":300 * for line in f: * (fword, eword, score1, score2) = line.split() * f_id = self.get_f_id(fword) # <<<<<<<<<<<<<< @@ -16007,7 +16002,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_f_id = __pyx_t_10; __pyx_t_10 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":301 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":301 * (fword, eword, score1, score2) = line.split() * f_id = self.get_f_id(fword) * e_id = self.get_e_id(eword) # <<<<<<<<<<<<<< @@ -16029,7 +16024,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_e_id = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":302 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":302 * f_id = self.get_f_id(fword) * e_id = self.get_e_id(eword) * index = self.f_index.arr[f_id] + fcount.arr[f_id] # <<<<<<<<<<<<<< @@ -16044,7 +16039,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_index = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":303 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":303 * e_id = self.get_e_id(eword) * index = self.f_index.arr[f_id] + fcount.arr[f_id] * fcount.arr[f_id] = fcount.arr[f_id] + 1 # <<<<<<<<<<<<<< @@ -16055,7 +16050,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_t_15 = __Pyx_PyIndex_AsSsize_t(__pyx_v_f_id); if (unlikely((__pyx_t_15 == (Py_ssize_t)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 303; __pyx_clineno = __LINE__; goto __pyx_L7_error;} (__pyx_v_fcount->arr[__pyx_t_15]) = ((__pyx_v_fcount->arr[__pyx_t_17]) + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":304 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":304 * index = self.f_index.arr[f_id] + fcount.arr[f_id] * fcount.arr[f_id] = fcount.arr[f_id] + 1 * self.e_index.arr[index] = int(e_id) # <<<<<<<<<<<<<< @@ -16075,7 +16070,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_t_17 = __Pyx_PyIndex_AsSsize_t(__pyx_v_index); if (unlikely((__pyx_t_17 == (Py_ssize_t)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 304; __pyx_clineno = __LINE__; goto __pyx_L7_error;} (__pyx_v_self->e_index->arr[__pyx_t_17]) = __pyx_t_20; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":305 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":305 * fcount.arr[f_id] = fcount.arr[f_id] + 1 * self.e_index.arr[index] = int(e_id) * self.col1[index] = float(score1) # <<<<<<<<<<<<<< @@ -16088,7 +16083,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ if (PyObject_SetItem(((PyObject *)__pyx_v_self->col1), __pyx_v_index, __pyx_t_2) < 0) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 305; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":306 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":306 * self.e_index.arr[index] = int(e_id) * self.col1[index] = float(score1) * self.col2[index] = float(score2) # <<<<<<<<<<<<<< @@ -16116,7 +16111,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_XDECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":273 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":273 * * fcount = IntList() * with gzip_or_text(filename) as f: # <<<<<<<<<<<<<< @@ -16196,7 +16191,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_L31:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":309 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":309 * * # Sort buckets by eword * for b from 0 <= b < n_f: # <<<<<<<<<<<<<< @@ -16212,7 +16207,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_b = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":310 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":310 * # Sort buckets by eword * for b from 0 <= b < n_f: * i = self.f_index.arr[b] # <<<<<<<<<<<<<< @@ -16226,7 +16221,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_i = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":311 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":311 * for b from 0 <= b < n_f: * i = self.f_index.arr[b] * j = self.f_index.arr[b+1] # <<<<<<<<<<<<<< @@ -16243,7 +16238,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_j = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":312 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":312 * i = self.f_index.arr[b] * j = self.f_index.arr[b+1] * self.qsort(i,j, "") # <<<<<<<<<<<<<< @@ -16261,7 +16256,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ __pyx_t_18 = __Pyx_PyInt_AsLong(__pyx_v_b); if (unlikely((__pyx_t_18 == (long)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 309; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":309 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":309 * * # Sort buckets by eword * for b from 0 <= b < n_f: # <<<<<<<<<<<<<< @@ -16307,7 +16302,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":315 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":315 * * * cdef swap(self, int i, int j): # <<<<<<<<<<<<<< @@ -16323,7 +16318,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_swap(struct __pyx_obj_3_sa_BiLex *__pyx_v_s int __pyx_t_1; __Pyx_RefNannySetupContext("swap", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":319 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":319 * cdef float ftmp * * if i == j: # <<<<<<<<<<<<<< @@ -16333,7 +16328,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_swap(struct __pyx_obj_3_sa_BiLex *__pyx_v_s __pyx_t_1 = (__pyx_v_i == __pyx_v_j); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":320 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":320 * * if i == j: * return # <<<<<<<<<<<<<< @@ -16347,7 +16342,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_swap(struct __pyx_obj_3_sa_BiLex *__pyx_v_s } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":322 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":322 * return * * itmp = self.e_index.arr[i] # <<<<<<<<<<<<<< @@ -16356,7 +16351,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_swap(struct __pyx_obj_3_sa_BiLex *__pyx_v_s */ __pyx_v_itmp = (__pyx_v_self->e_index->arr[__pyx_v_i]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":323 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":323 * * itmp = self.e_index.arr[i] * self.e_index.arr[i] = self.e_index.arr[j] # <<<<<<<<<<<<<< @@ -16365,7 +16360,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_swap(struct __pyx_obj_3_sa_BiLex *__pyx_v_s */ (__pyx_v_self->e_index->arr[__pyx_v_i]) = (__pyx_v_self->e_index->arr[__pyx_v_j]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":324 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":324 * itmp = self.e_index.arr[i] * self.e_index.arr[i] = self.e_index.arr[j] * self.e_index.arr[j] = itmp # <<<<<<<<<<<<<< @@ -16374,7 +16369,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_swap(struct __pyx_obj_3_sa_BiLex *__pyx_v_s */ (__pyx_v_self->e_index->arr[__pyx_v_j]) = __pyx_v_itmp; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":326 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":326 * self.e_index.arr[j] = itmp * * ftmp = self.col1.arr[i] # <<<<<<<<<<<<<< @@ -16383,7 +16378,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_swap(struct __pyx_obj_3_sa_BiLex *__pyx_v_s */ __pyx_v_ftmp = (__pyx_v_self->col1->arr[__pyx_v_i]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":327 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":327 * * ftmp = self.col1.arr[i] * self.col1.arr[i] = self.col1.arr[j] # <<<<<<<<<<<<<< @@ -16392,7 +16387,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_swap(struct __pyx_obj_3_sa_BiLex *__pyx_v_s */ (__pyx_v_self->col1->arr[__pyx_v_i]) = (__pyx_v_self->col1->arr[__pyx_v_j]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":328 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":328 * ftmp = self.col1.arr[i] * self.col1.arr[i] = self.col1.arr[j] * self.col1.arr[j] = ftmp # <<<<<<<<<<<<<< @@ -16401,7 +16396,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_swap(struct __pyx_obj_3_sa_BiLex *__pyx_v_s */ (__pyx_v_self->col1->arr[__pyx_v_j]) = __pyx_v_ftmp; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":330 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":330 * self.col1.arr[j] = ftmp * * ftmp = self.col2.arr[i] # <<<<<<<<<<<<<< @@ -16410,7 +16405,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_swap(struct __pyx_obj_3_sa_BiLex *__pyx_v_s */ __pyx_v_ftmp = (__pyx_v_self->col2->arr[__pyx_v_i]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":331 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":331 * * ftmp = self.col2.arr[i] * self.col2.arr[i] = self.col2.arr[j] # <<<<<<<<<<<<<< @@ -16419,7 +16414,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_swap(struct __pyx_obj_3_sa_BiLex *__pyx_v_s */ (__pyx_v_self->col2->arr[__pyx_v_i]) = (__pyx_v_self->col2->arr[__pyx_v_j]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":332 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":332 * ftmp = self.col2.arr[i] * self.col2.arr[i] = self.col2.arr[j] * self.col2.arr[j] = ftmp # <<<<<<<<<<<<<< @@ -16435,7 +16430,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_swap(struct __pyx_obj_3_sa_BiLex *__pyx_v_s return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":335 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":335 * * * cdef qsort(self, int i, int j, pad): # <<<<<<<<<<<<<< @@ -16458,7 +16453,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("qsort", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":338 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":338 * cdef int pval, p * * if i > j: # <<<<<<<<<<<<<< @@ -16468,7 +16463,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ __pyx_t_1 = (__pyx_v_i > __pyx_v_j); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":339 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":339 * * if i > j: * raise Exception("Sort error in CLex") # <<<<<<<<<<<<<< @@ -16484,7 +16479,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":340 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":340 * if i > j: * raise Exception("Sort error in CLex") * if i == j: #empty interval # <<<<<<<<<<<<<< @@ -16494,7 +16489,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ __pyx_t_1 = (__pyx_v_i == __pyx_v_j); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":341 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":341 * raise Exception("Sort error in CLex") * if i == j: #empty interval * return # <<<<<<<<<<<<<< @@ -16508,7 +16503,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":342 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":342 * if i == j: #empty interval * return * if i == j-1: # singleton interval # <<<<<<<<<<<<<< @@ -16518,7 +16513,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ __pyx_t_1 = (__pyx_v_i == (__pyx_v_j - 1)); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":343 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":343 * return * if i == j-1: # singleton interval * return # <<<<<<<<<<<<<< @@ -16532,7 +16527,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":345 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":345 * return * * p = (i+j)/2 # <<<<<<<<<<<<<< @@ -16541,7 +16536,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ */ __pyx_v_p = __Pyx_div_long((__pyx_v_i + __pyx_v_j), 2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":346 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":346 * * p = (i+j)/2 * pval = self.e_index.arr[p] # <<<<<<<<<<<<<< @@ -16550,7 +16545,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ */ __pyx_v_pval = (__pyx_v_self->e_index->arr[__pyx_v_p]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":347 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":347 * p = (i+j)/2 * pval = self.e_index.arr[p] * self.swap(i, p) # <<<<<<<<<<<<<< @@ -16561,7 +16556,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":348 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":348 * pval = self.e_index.arr[p] * self.swap(i, p) * p = i # <<<<<<<<<<<<<< @@ -16570,7 +16565,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ */ __pyx_v_p = __pyx_v_i; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":349 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":349 * self.swap(i, p) * p = i * for k from i+1 <= k < j: # <<<<<<<<<<<<<< @@ -16580,7 +16575,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ __pyx_t_3 = __pyx_v_j; for (__pyx_v_k = (__pyx_v_i + 1); __pyx_v_k < __pyx_t_3; __pyx_v_k++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":350 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":350 * p = i * for k from i+1 <= k < j: * if pval >= self.e_index.arr[k]: # <<<<<<<<<<<<<< @@ -16590,7 +16585,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ __pyx_t_1 = (__pyx_v_pval >= (__pyx_v_self->e_index->arr[__pyx_v_k])); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":351 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":351 * for k from i+1 <= k < j: * if pval >= self.e_index.arr[k]: * self.swap(p+1, k) # <<<<<<<<<<<<<< @@ -16601,7 +16596,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":352 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":352 * if pval >= self.e_index.arr[k]: * self.swap(p+1, k) * self.swap(p, p+1) # <<<<<<<<<<<<<< @@ -16612,7 +16607,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":353 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":353 * self.swap(p+1, k) * self.swap(p, p+1) * p = p + 1 # <<<<<<<<<<<<<< @@ -16625,7 +16620,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ __pyx_L8:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":354 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":354 * self.swap(p, p+1) * p = p + 1 * self.qsort(i,p, pad+" ") # <<<<<<<<<<<<<< @@ -16639,7 +16634,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":355 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":355 * p = p + 1 * self.qsort(i,p, pad+" ") * self.qsort(p+1,j, pad+" ") # <<<<<<<<<<<<<< @@ -16687,7 +16682,7 @@ static PyObject *__pyx_pw_3_sa_5BiLex_13write_enhanced(PyObject *__pyx_v_self, P return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":358 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":358 * * * def write_enhanced(self, char* filename): # <<<<<<<<<<<<<< @@ -16724,7 +16719,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL int __pyx_clineno = 0; __Pyx_RefNannySetupContext("write_enhanced", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":359 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":359 * * def write_enhanced(self, char* filename): * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -16764,7 +16759,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL __pyx_v_f = __pyx_t_4; __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":360 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":360 * def write_enhanced(self, char* filename): * with open(filename, "w") as f: * for i in self.f_index: # <<<<<<<<<<<<<< @@ -16809,7 +16804,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL __pyx_v_i = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":361 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":361 * with open(filename, "w") as f: * for i in self.f_index: * f.write("%d " % i) # <<<<<<<<<<<<<< @@ -16833,7 +16828,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL } __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":362 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":362 * for i in self.f_index: * f.write("%d " % i) * f.write("\n") # <<<<<<<<<<<<<< @@ -16847,7 +16842,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":363 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":363 * f.write("%d " % i) * f.write("\n") * for i, s1, s2 in zip(self.e_index, self.col1, self.col2): # <<<<<<<<<<<<<< @@ -16968,7 +16963,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL __pyx_v_s2 = __pyx_t_11; __pyx_t_11 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":364 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":364 * f.write("\n") * for i, s1, s2 in zip(self.e_index, self.col1, self.col2): * f.write("%d %f %f " % (i, s1, s2)) # <<<<<<<<<<<<<< @@ -17004,7 +16999,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL } __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":365 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":365 * for i, s1, s2 in zip(self.e_index, self.col1, self.col2): * f.write("%d %f %f " % (i, s1, s2)) * f.write("\n") # <<<<<<<<<<<<<< @@ -17018,7 +17013,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":366 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":366 * f.write("%d %f %f " % (i, s1, s2)) * f.write("\n") * for i, w in enumerate(self.id2fword): # <<<<<<<<<<<<<< @@ -17073,7 +17068,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL __pyx_t_1 = __pyx_t_11; __pyx_t_11 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":367 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":367 * f.write("\n") * for i, w in enumerate(self.id2fword): * f.write("%d %s " % (i, w)) # <<<<<<<<<<<<<< @@ -17107,7 +17102,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":368 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":368 * for i, w in enumerate(self.id2fword): * f.write("%d %s " % (i, w)) * f.write("\n") # <<<<<<<<<<<<<< @@ -17121,7 +17116,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":369 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":369 * f.write("%d %s " % (i, w)) * f.write("\n") * for i, w in enumerate(self.id2eword): # <<<<<<<<<<<<<< @@ -17176,7 +17171,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL __pyx_t_2 = __pyx_t_10; __pyx_t_10 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":370 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":370 * f.write("\n") * for i, w in enumerate(self.id2eword): * f.write("%d %s " % (i, w)) # <<<<<<<<<<<<<< @@ -17210,7 +17205,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":371 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":371 * for i, w in enumerate(self.id2eword): * f.write("%d %s " % (i, w)) * f.write("\n") # <<<<<<<<<<<<<< @@ -17236,7 +17231,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL __Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_XDECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":359 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":359 * * def write_enhanced(self, char* filename): * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -17403,7 +17398,7 @@ static PyObject *__pyx_pw_3_sa_5BiLex_15get_score(PyObject *__pyx_v_self, PyObje return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":374 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":374 * * * def get_score(self, fword, eword, col): # <<<<<<<<<<<<<< @@ -17429,7 +17424,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("get_score", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":377 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":377 * cdef e_id, f_id, low, high, midpoint, val * * if eword not in self.eword2id: # <<<<<<<<<<<<<< @@ -17439,7 +17434,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ __pyx_t_1 = (__Pyx_PySequence_Contains(__pyx_v_eword, __pyx_v_self->eword2id, Py_NE)); if (unlikely(__pyx_t_1 < 0)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 377; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":378 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":378 * * if eword not in self.eword2id: * return None # <<<<<<<<<<<<<< @@ -17454,7 +17449,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":379 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":379 * if eword not in self.eword2id: * return None * if fword not in self.fword2id: # <<<<<<<<<<<<<< @@ -17464,7 +17459,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ __pyx_t_1 = (__Pyx_PySequence_Contains(__pyx_v_fword, __pyx_v_self->fword2id, Py_NE)); if (unlikely(__pyx_t_1 < 0)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 379; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":380 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":380 * return None * if fword not in self.fword2id: * return None # <<<<<<<<<<<<<< @@ -17479,7 +17474,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":381 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":381 * if fword not in self.fword2id: * return None * f_id = self.fword2id[fword] # <<<<<<<<<<<<<< @@ -17491,7 +17486,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_f_id = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":382 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":382 * return None * f_id = self.fword2id[fword] * e_id = self.eword2id[eword] # <<<<<<<<<<<<<< @@ -17503,7 +17498,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_e_id = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":383 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":383 * f_id = self.fword2id[fword] * e_id = self.eword2id[eword] * low = self.f_index.arr[f_id] # <<<<<<<<<<<<<< @@ -17516,7 +17511,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_low = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":384 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":384 * e_id = self.eword2id[eword] * low = self.f_index.arr[f_id] * high = self.f_index.arr[f_id+1] # <<<<<<<<<<<<<< @@ -17532,7 +17527,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_high = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":385 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":385 * low = self.f_index.arr[f_id] * high = self.f_index.arr[f_id+1] * while high - low > 0: # <<<<<<<<<<<<<< @@ -17548,7 +17543,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; if (!__pyx_t_1) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":386 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":386 * high = self.f_index.arr[f_id+1] * while high - low > 0: * midpoint = (low+high)/2 # <<<<<<<<<<<<<< @@ -17564,7 +17559,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_midpoint = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":387 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":387 * while high - low > 0: * midpoint = (low+high)/2 * val = self.e_index.arr[midpoint] # <<<<<<<<<<<<<< @@ -17578,7 +17573,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ __pyx_v_val = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":388 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":388 * midpoint = (low+high)/2 * val = self.e_index.arr[midpoint] * if val == e_id: # <<<<<<<<<<<<<< @@ -17590,7 +17585,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":389 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":389 * val = self.e_index.arr[midpoint] * if val == e_id: * if col == 0: # <<<<<<<<<<<<<< @@ -17602,7 +17597,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":390 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":390 * if val == e_id: * if col == 0: * return self.col1.arr[midpoint] # <<<<<<<<<<<<<< @@ -17620,7 +17615,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ } __pyx_L8:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":391 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":391 * if col == 0: * return self.col1.arr[midpoint] * if col == 1: # <<<<<<<<<<<<<< @@ -17632,7 +17627,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":392 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":392 * return self.col1.arr[midpoint] * if col == 1: * return self.col2.arr[midpoint] # <<<<<<<<<<<<<< @@ -17653,7 +17648,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ } __pyx_L7:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":393 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":393 * if col == 1: * return self.col2.arr[midpoint] * if val > e_id: # <<<<<<<<<<<<<< @@ -17665,7 +17660,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":394 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":394 * return self.col2.arr[midpoint] * if val > e_id: * high = midpoint # <<<<<<<<<<<<<< @@ -17679,7 +17674,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ } __pyx_L10:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":395 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":395 * if val > e_id: * high = midpoint * if val < e_id: # <<<<<<<<<<<<<< @@ -17691,7 +17686,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":396 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":396 * high = midpoint * if val < e_id: * low = midpoint + 1 # <<<<<<<<<<<<<< @@ -17708,7 +17703,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_14get_score(struct __pyx_obj_3_sa_BiLex *_ __pyx_L11:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":397 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":397 * if val < e_id: * low = midpoint + 1 * return None # <<<<<<<<<<<<<< @@ -17761,7 +17756,7 @@ static PyObject *__pyx_pw_3_sa_5BiLex_17write_text(PyObject *__pyx_v_self, PyObj return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":400 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":400 * * * def write_text(self, char* filename): # <<<<<<<<<<<<<< @@ -17798,7 +17793,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_16write_text(struct __pyx_obj_3_sa_BiLex * int __pyx_clineno = 0; __Pyx_RefNannySetupContext("write_text", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":404 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":404 * cdef i, N, e_id, f_id * * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -17838,7 +17833,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_16write_text(struct __pyx_obj_3_sa_BiLex * __pyx_v_f = __pyx_t_4; __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":405 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":405 * * with open(filename, "w") as f: * N = len(self.e_index) # <<<<<<<<<<<<<< @@ -17854,7 +17849,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_16write_text(struct __pyx_obj_3_sa_BiLex * __pyx_v_N = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":406 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":406 * with open(filename, "w") as f: * N = len(self.e_index) * f_id = 0 # <<<<<<<<<<<<<< @@ -17864,7 +17859,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_16write_text(struct __pyx_obj_3_sa_BiLex * __Pyx_INCREF(__pyx_int_0); __pyx_v_f_id = __pyx_int_0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":407 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":407 * N = len(self.e_index) * f_id = 0 * for i from 0 <= i < N: # <<<<<<<<<<<<<< @@ -17879,7 +17874,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_16write_text(struct __pyx_obj_3_sa_BiLex * __pyx_v_i = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":408 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":408 * f_id = 0 * for i from 0 <= i < N: * while self.f_index.arr[f_id+1] == i: # <<<<<<<<<<<<<< @@ -17899,7 +17894,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_16write_text(struct __pyx_obj_3_sa_BiLex * __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; if (!__pyx_t_11) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":409 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":409 * for i from 0 <= i < N: * while self.f_index.arr[f_id+1] == i: * f_id = f_id + 1 # <<<<<<<<<<<<<< @@ -17913,7 +17908,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_16write_text(struct __pyx_obj_3_sa_BiLex * __pyx_t_1 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":410 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":410 * while self.f_index.arr[f_id+1] == i: * f_id = f_id + 1 * e_id = self.e_index.arr[i] # <<<<<<<<<<<<<< @@ -17927,7 +17922,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_16write_text(struct __pyx_obj_3_sa_BiLex * __pyx_v_e_id = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":411 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":411 * f_id = f_id + 1 * e_id = self.e_index.arr[i] * score1 = self.col1.arr[i] # <<<<<<<<<<<<<< @@ -17941,7 +17936,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_16write_text(struct __pyx_obj_3_sa_BiLex * __pyx_v_score1 = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":412 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":412 * e_id = self.e_index.arr[i] * score1 = self.col1.arr[i] * score2 = self.col2.arr[i] # <<<<<<<<<<<<<< @@ -17954,7 +17949,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_16write_text(struct __pyx_obj_3_sa_BiLex * __pyx_v_score2 = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":413 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":413 * score1 = self.col1.arr[i] * score2 = self.col2.arr[i] * f.write("%s %s %.6f %.6f\n" % (self.id2fword[f_id], self.id2eword[e_id], score1, score2)) # <<<<<<<<<<<<<< @@ -17995,7 +17990,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_16write_text(struct __pyx_obj_3_sa_BiLex * __pyx_t_10 = __Pyx_PyInt_AsLong(__pyx_v_i); if (unlikely((__pyx_t_10 == (long)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 407; __pyx_clineno = __LINE__; goto __pyx_L7_error;} } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":407 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":407 * N = len(self.e_index) * f_id = 0 * for i from 0 <= i < N: # <<<<<<<<<<<<<< @@ -18018,7 +18013,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_16write_text(struct __pyx_obj_3_sa_BiLex * __Pyx_XDECREF(__pyx_t_12); __pyx_t_12 = 0; __Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":404 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":404 * cdef i, N, e_id, f_id * * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -18120,7 +18115,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_16write_text(struct __pyx_obj_3_sa_BiLex * return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":21 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":21 * cdef int LOWER_MASK[32] * * cdef void _init_lower_mask(): # <<<<<<<<<<<<<< @@ -18136,7 +18131,7 @@ static void __pyx_f_3_sa__init_lower_mask(void) { unsigned int __pyx_t_2; __Pyx_RefNannySetupContext("_init_lower_mask", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":23 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":23 * cdef void _init_lower_mask(): * cdef unsigned i * cdef int mask = 0 # <<<<<<<<<<<<<< @@ -18145,7 +18140,7 @@ static void __pyx_f_3_sa__init_lower_mask(void) { */ __pyx_v_mask = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":24 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":24 * cdef unsigned i * cdef int mask = 0 * for i in range(MIN_BOTTOM_SIZE): # <<<<<<<<<<<<<< @@ -18156,7 +18151,7 @@ static void __pyx_f_3_sa__init_lower_mask(void) { for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_1; __pyx_t_2+=1) { __pyx_v_i = __pyx_t_2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":25 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":25 * cdef int mask = 0 * for i in range(MIN_BOTTOM_SIZE): * mask = (mask << 1) + 1 # <<<<<<<<<<<<<< @@ -18165,7 +18160,7 @@ static void __pyx_f_3_sa__init_lower_mask(void) { */ __pyx_v_mask = ((__pyx_v_mask << 1) + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":26 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":26 * for i in range(MIN_BOTTOM_SIZE): * mask = (mask << 1) + 1 * LOWER_MASK[i] = mask # <<<<<<<<<<<<<< @@ -18178,7 +18173,7 @@ static void __pyx_f_3_sa__init_lower_mask(void) { __Pyx_RefNannyFinishContext(); } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":37 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":37 * * * cdef _BitSet* new_BitSet(): # <<<<<<<<<<<<<< @@ -18192,7 +18187,7 @@ static struct __pyx_t_3_sa__BitSet *__pyx_f_3_sa_new_BitSet(void) { __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("new_BitSet", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":40 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":40 * cdef _BitSet* b * * b = <_BitSet*> malloc(sizeof(_BitSet)) # <<<<<<<<<<<<<< @@ -18201,7 +18196,7 @@ static struct __pyx_t_3_sa__BitSet *__pyx_f_3_sa_new_BitSet(void) { */ __pyx_v_b = ((struct __pyx_t_3_sa__BitSet *)malloc((sizeof(struct __pyx_t_3_sa__BitSet)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":41 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":41 * * b = <_BitSet*> malloc(sizeof(_BitSet)) * b.bitset = 0 # <<<<<<<<<<<<<< @@ -18210,7 +18205,7 @@ static struct __pyx_t_3_sa__BitSet *__pyx_f_3_sa_new_BitSet(void) { */ __pyx_v_b->bitset = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":42 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":42 * b = <_BitSet*> malloc(sizeof(_BitSet)) * b.bitset = 0 * b.min_val = -1 # <<<<<<<<<<<<<< @@ -18219,7 +18214,7 @@ static struct __pyx_t_3_sa__BitSet *__pyx_f_3_sa_new_BitSet(void) { */ __pyx_v_b->min_val = -1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":43 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":43 * b.bitset = 0 * b.min_val = -1 * b.max_val = -1 # <<<<<<<<<<<<<< @@ -18228,7 +18223,7 @@ static struct __pyx_t_3_sa__BitSet *__pyx_f_3_sa_new_BitSet(void) { */ __pyx_v_b->max_val = -1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":44 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":44 * b.min_val = -1 * b.max_val = -1 * b.size = 0 # <<<<<<<<<<<<<< @@ -18237,7 +18232,7 @@ static struct __pyx_t_3_sa__BitSet *__pyx_f_3_sa_new_BitSet(void) { */ __pyx_v_b->size = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":45 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":45 * b.max_val = -1 * b.size = 0 * return b # <<<<<<<<<<<<<< @@ -18253,7 +18248,7 @@ static struct __pyx_t_3_sa__BitSet *__pyx_f_3_sa_new_BitSet(void) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":48 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":48 * * * cdef int bitset_findsucc(_BitSet* b, int i): # <<<<<<<<<<<<<< @@ -18274,7 +18269,7 @@ static int __pyx_f_3_sa_bitset_findsucc(struct __pyx_t_3_sa__BitSet *__pyx_v_b, int __pyx_t_3; __Pyx_RefNannySetupContext("bitset_findsucc", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":52 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":52 * cdef int low, high, mid * * if b.max_val == -1 or i >= b.max_val: # <<<<<<<<<<<<<< @@ -18290,7 +18285,7 @@ static int __pyx_f_3_sa_bitset_findsucc(struct __pyx_t_3_sa__BitSet *__pyx_v_b, } if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":53 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":53 * * if b.max_val == -1 or i >= b.max_val: * return -1 # <<<<<<<<<<<<<< @@ -18303,7 +18298,7 @@ static int __pyx_f_3_sa_bitset_findsucc(struct __pyx_t_3_sa__BitSet *__pyx_v_b, } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":54 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":54 * if b.max_val == -1 or i >= b.max_val: * return -1 * if i < b.min_val: # <<<<<<<<<<<<<< @@ -18313,7 +18308,7 @@ static int __pyx_f_3_sa_bitset_findsucc(struct __pyx_t_3_sa__BitSet *__pyx_v_b, __pyx_t_3 = (__pyx_v_i < __pyx_v_b->min_val); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":55 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":55 * return -1 * if i < b.min_val: * return b.min_val # <<<<<<<<<<<<<< @@ -18326,7 +18321,7 @@ static int __pyx_f_3_sa_bitset_findsucc(struct __pyx_t_3_sa__BitSet *__pyx_v_b, } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":57 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":57 * return b.min_val * * bitset = b.bitset & ~LOWER_MASK[i] # <<<<<<<<<<<<<< @@ -18335,7 +18330,7 @@ static int __pyx_f_3_sa_bitset_findsucc(struct __pyx_t_3_sa__BitSet *__pyx_v_b, */ __pyx_v_bitset = (__pyx_v_b->bitset & (~(__pyx_v_3_sa_LOWER_MASK[__pyx_v_i]))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":58 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":58 * * bitset = b.bitset & ~LOWER_MASK[i] * low = i+1 # <<<<<<<<<<<<<< @@ -18344,7 +18339,7 @@ static int __pyx_f_3_sa_bitset_findsucc(struct __pyx_t_3_sa__BitSet *__pyx_v_b, */ __pyx_v_low = (__pyx_v_i + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":59 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":59 * bitset = b.bitset & ~LOWER_MASK[i] * low = i+1 * high = b.max_val+1 # <<<<<<<<<<<<<< @@ -18353,7 +18348,7 @@ static int __pyx_f_3_sa_bitset_findsucc(struct __pyx_t_3_sa__BitSet *__pyx_v_b, */ __pyx_v_high = (__pyx_v_b->max_val + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":60 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":60 * low = i+1 * high = b.max_val+1 * while low < high-1: # <<<<<<<<<<<<<< @@ -18364,7 +18359,7 @@ static int __pyx_f_3_sa_bitset_findsucc(struct __pyx_t_3_sa__BitSet *__pyx_v_b, __pyx_t_3 = (__pyx_v_low < (__pyx_v_high - 1)); if (!__pyx_t_3) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":61 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":61 * high = b.max_val+1 * while low < high-1: * mid = (high + low)/2 # <<<<<<<<<<<<<< @@ -18373,7 +18368,7 @@ static int __pyx_f_3_sa_bitset_findsucc(struct __pyx_t_3_sa__BitSet *__pyx_v_b, */ __pyx_v_mid = __Pyx_div_long((__pyx_v_high + __pyx_v_low), 2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":62 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":62 * while low < high-1: * mid = (high + low)/2 * mask = ~(LOWER_MASK[high-1] ^ LOWER_MASK[mid-1]) # <<<<<<<<<<<<<< @@ -18382,7 +18377,7 @@ static int __pyx_f_3_sa_bitset_findsucc(struct __pyx_t_3_sa__BitSet *__pyx_v_b, */ __pyx_v_mask = (~((__pyx_v_3_sa_LOWER_MASK[(__pyx_v_high - 1)]) ^ (__pyx_v_3_sa_LOWER_MASK[(__pyx_v_mid - 1)]))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":63 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":63 * mid = (high + low)/2 * mask = ~(LOWER_MASK[high-1] ^ LOWER_MASK[mid-1]) * if bitset & mask == 0: # <<<<<<<<<<<<<< @@ -18392,7 +18387,7 @@ static int __pyx_f_3_sa_bitset_findsucc(struct __pyx_t_3_sa__BitSet *__pyx_v_b, __pyx_t_3 = ((__pyx_v_bitset & __pyx_v_mask) == 0); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":64 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":64 * mask = ~(LOWER_MASK[high-1] ^ LOWER_MASK[mid-1]) * if bitset & mask == 0: * low = mid # <<<<<<<<<<<<<< @@ -18404,7 +18399,7 @@ static int __pyx_f_3_sa_bitset_findsucc(struct __pyx_t_3_sa__BitSet *__pyx_v_b, } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":66 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":66 * low = mid * else: * bitset = bitset & mask # <<<<<<<<<<<<<< @@ -18413,7 +18408,7 @@ static int __pyx_f_3_sa_bitset_findsucc(struct __pyx_t_3_sa__BitSet *__pyx_v_b, */ __pyx_v_bitset = (__pyx_v_bitset & __pyx_v_mask); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":67 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":67 * else: * bitset = bitset & mask * high = mid # <<<<<<<<<<<<<< @@ -18425,7 +18420,7 @@ static int __pyx_f_3_sa_bitset_findsucc(struct __pyx_t_3_sa__BitSet *__pyx_v_b, __pyx_L7:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":68 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":68 * bitset = bitset & mask * high = mid * return low # <<<<<<<<<<<<<< @@ -18441,7 +18436,7 @@ static int __pyx_f_3_sa_bitset_findsucc(struct __pyx_t_3_sa__BitSet *__pyx_v_b, return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":71 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":71 * * * cdef int bitset_insert(_BitSet* b, int i): # <<<<<<<<<<<<<< @@ -18456,7 +18451,7 @@ static int __pyx_f_3_sa_bitset_insert(struct __pyx_t_3_sa__BitSet *__pyx_v_b, in int __pyx_t_1; __Pyx_RefNannySetupContext("bitset_insert", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":74 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":74 * cdef int val * * val = 1 << i # <<<<<<<<<<<<<< @@ -18465,7 +18460,7 @@ static int __pyx_f_3_sa_bitset_insert(struct __pyx_t_3_sa__BitSet *__pyx_v_b, in */ __pyx_v_val = (1 << __pyx_v_i); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":75 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":75 * * val = 1 << i * if b.bitset & val == 0: # <<<<<<<<<<<<<< @@ -18475,7 +18470,7 @@ static int __pyx_f_3_sa_bitset_insert(struct __pyx_t_3_sa__BitSet *__pyx_v_b, in __pyx_t_1 = ((__pyx_v_b->bitset & __pyx_v_val) == 0); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":76 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":76 * val = 1 << i * if b.bitset & val == 0: * b.bitset = b.bitset | val # <<<<<<<<<<<<<< @@ -18484,7 +18479,7 @@ static int __pyx_f_3_sa_bitset_insert(struct __pyx_t_3_sa__BitSet *__pyx_v_b, in */ __pyx_v_b->bitset = (__pyx_v_b->bitset | __pyx_v_val); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":77 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":77 * if b.bitset & val == 0: * b.bitset = b.bitset | val * if b.size == 0: # <<<<<<<<<<<<<< @@ -18494,7 +18489,7 @@ static int __pyx_f_3_sa_bitset_insert(struct __pyx_t_3_sa__BitSet *__pyx_v_b, in __pyx_t_1 = (__pyx_v_b->size == 0); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":78 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":78 * b.bitset = b.bitset | val * if b.size == 0: * b.min_val = i # <<<<<<<<<<<<<< @@ -18503,7 +18498,7 @@ static int __pyx_f_3_sa_bitset_insert(struct __pyx_t_3_sa__BitSet *__pyx_v_b, in */ __pyx_v_b->min_val = __pyx_v_i; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":79 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":79 * if b.size == 0: * b.min_val = i * b.max_val = i # <<<<<<<<<<<<<< @@ -18515,7 +18510,7 @@ static int __pyx_f_3_sa_bitset_insert(struct __pyx_t_3_sa__BitSet *__pyx_v_b, in } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":81 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":81 * b.max_val = i * else: * if i < b.min_val: # <<<<<<<<<<<<<< @@ -18525,7 +18520,7 @@ static int __pyx_f_3_sa_bitset_insert(struct __pyx_t_3_sa__BitSet *__pyx_v_b, in __pyx_t_1 = (__pyx_v_i < __pyx_v_b->min_val); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":82 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":82 * else: * if i < b.min_val: * b.min_val = i # <<<<<<<<<<<<<< @@ -18537,7 +18532,7 @@ static int __pyx_f_3_sa_bitset_insert(struct __pyx_t_3_sa__BitSet *__pyx_v_b, in } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":83 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":83 * if i < b.min_val: * b.min_val = i * if i > b.max_val: # <<<<<<<<<<<<<< @@ -18547,7 +18542,7 @@ static int __pyx_f_3_sa_bitset_insert(struct __pyx_t_3_sa__BitSet *__pyx_v_b, in __pyx_t_1 = (__pyx_v_i > __pyx_v_b->max_val); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":84 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":84 * b.min_val = i * if i > b.max_val: * b.max_val = i # <<<<<<<<<<<<<< @@ -18561,7 +18556,7 @@ static int __pyx_f_3_sa_bitset_insert(struct __pyx_t_3_sa__BitSet *__pyx_v_b, in } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":85 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":85 * if i > b.max_val: * b.max_val = i * b.size = b.size + 1 # <<<<<<<<<<<<<< @@ -18570,7 +18565,7 @@ static int __pyx_f_3_sa_bitset_insert(struct __pyx_t_3_sa__BitSet *__pyx_v_b, in */ __pyx_v_b->size = (__pyx_v_b->size + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":86 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":86 * b.max_val = i * b.size = b.size + 1 * return 1 # <<<<<<<<<<<<<< @@ -18583,7 +18578,7 @@ static int __pyx_f_3_sa_bitset_insert(struct __pyx_t_3_sa__BitSet *__pyx_v_b, in } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":87 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":87 * b.size = b.size + 1 * return 1 * return 0 # <<<<<<<<<<<<<< @@ -18599,7 +18594,7 @@ static int __pyx_f_3_sa_bitset_insert(struct __pyx_t_3_sa__BitSet *__pyx_v_b, in return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":90 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":90 * * * cdef int bitset_contains(_BitSet* b, int i): # <<<<<<<<<<<<<< @@ -18614,7 +18609,7 @@ static int __pyx_f_3_sa_bitset_contains(struct __pyx_t_3_sa__BitSet *__pyx_v_b, int __pyx_t_1; __Pyx_RefNannySetupContext("bitset_contains", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":93 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":93 * cdef int val * * val = 1 << i # <<<<<<<<<<<<<< @@ -18623,7 +18618,7 @@ static int __pyx_f_3_sa_bitset_contains(struct __pyx_t_3_sa__BitSet *__pyx_v_b, */ __pyx_v_val = (1 << __pyx_v_i); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":94 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":94 * * val = 1 << i * if b.bitset & val == 0: # <<<<<<<<<<<<<< @@ -18633,7 +18628,7 @@ static int __pyx_f_3_sa_bitset_contains(struct __pyx_t_3_sa__BitSet *__pyx_v_b, __pyx_t_1 = ((__pyx_v_b->bitset & __pyx_v_val) == 0); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":95 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":95 * val = 1 << i * if b.bitset & val == 0: * return 0 # <<<<<<<<<<<<<< @@ -18646,7 +18641,7 @@ static int __pyx_f_3_sa_bitset_contains(struct __pyx_t_3_sa__BitSet *__pyx_v_b, } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":97 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":97 * return 0 * else: * return 1 # <<<<<<<<<<<<<< @@ -18675,7 +18670,7 @@ static PyObject *__pyx_pw_3_sa_14BitSetIterator_1__next__(PyObject *__pyx_v_self return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":104 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":104 * cdef int next_val * * def __next__(self): # <<<<<<<<<<<<<< @@ -18694,7 +18689,7 @@ static PyObject *__pyx_pf_3_sa_14BitSetIterator___next__(struct __pyx_obj_3_sa_B int __pyx_clineno = 0; 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- /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":110 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":110 * raise StopIteration() * ret_val = self.next_val * self.next_val = bitset_findsucc(self.b, ret_val) # <<<<<<<<<<<<<< @@ -18738,7 +18733,7 @@ static PyObject *__pyx_pf_3_sa_14BitSetIterator___next__(struct __pyx_obj_3_sa_B */ __pyx_v_self->next_val = __pyx_f_3_sa_bitset_findsucc(__pyx_v_self->b, __pyx_v_ret_val); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":111 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":111 * ret_val = self.next_val * self.next_val = bitset_findsucc(self.b, ret_val) * return ret_val # <<<<<<<<<<<<<< @@ -18778,7 +18773,7 @@ static int __pyx_pw_3_sa_6BitSet_1__cinit__(PyObject *__pyx_v_self, PyObject *__ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":122 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":122 * cdef _BitSet* b * * def __cinit__(self): # <<<<<<<<<<<<<< @@ -18791,7 +18786,7 @@ static int __pyx_pf_3_sa_6BitSet___cinit__(struct __pyx_obj_3_sa_BitSet *__pyx_v __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":123 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":123 * * def __cinit__(self): * self.b = new_BitSet() # <<<<<<<<<<<<<< @@ -18814,7 +18809,7 @@ static void __pyx_pw_3_sa_6BitSet_3__dealloc__(PyObject *__pyx_v_self) { __Pyx_RefNannyFinishContext(); } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":125 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":125 * self.b = new_BitSet() * * def __dealloc__(self): # <<<<<<<<<<<<<< @@ -18826,7 +18821,7 @@ static void __pyx_pf_3_sa_6BitSet_2__dealloc__(struct __pyx_obj_3_sa_BitSet *__p __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("__dealloc__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":126 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":126 * * def __dealloc__(self): * free(self.b) # <<<<<<<<<<<<<< @@ -18849,7 +18844,7 @@ static PyObject *__pyx_pw_3_sa_6BitSet_5__iter__(PyObject *__pyx_v_self) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":128 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":128 * free(self.b) * * def __iter__(self): # <<<<<<<<<<<<<< @@ -18867,7 +18862,7 @@ static PyObject *__pyx_pf_3_sa_6BitSet_4__iter__(struct __pyx_obj_3_sa_BitSet *_ int __pyx_clineno = 0; 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- /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":133 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":133 * it.b = self.b * it.next_val = self.b.min_val * return it # <<<<<<<<<<<<<< @@ -18933,7 +18928,7 @@ static PyObject *__pyx_pw_3_sa_6BitSet_7insert(PyObject *__pyx_v_self, PyObject return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":135 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":135 * return it * * def insert(self, i): # <<<<<<<<<<<<<< @@ -18951,7 +18946,7 @@ static PyObject *__pyx_pf_3_sa_6BitSet_6insert(struct __pyx_obj_3_sa_BitSet *__p int __pyx_clineno = 0; __Pyx_RefNannySetupContext("insert", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":136 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":136 * * def insert(self, i): * return bitset_insert(self.b, i) # <<<<<<<<<<<<<< @@ -18989,7 +18984,7 @@ static PyObject *__pyx_pw_3_sa_6BitSet_9findsucc(PyObject *__pyx_v_self, PyObjec return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":138 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":138 * return bitset_insert(self.b, i) * * def findsucc(self, i): # <<<<<<<<<<<<<< @@ -19007,7 +19002,7 @@ static PyObject *__pyx_pf_3_sa_6BitSet_8findsucc(struct __pyx_obj_3_sa_BitSet *_ int __pyx_clineno = 0; 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} -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":144 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":144 * return dec2bin(self.b.bitset)+" ("+str(self.b.size)+","+str(self.b.min_val)+","+str(self.b.max_val)+")" * * def min(self): # <<<<<<<<<<<<<< @@ -19174,7 +19169,7 @@ static PyObject *__pyx_pf_3_sa_6BitSet_12min(struct __pyx_obj_3_sa_BitSet *__pyx int __pyx_clineno = 0; __Pyx_RefNannySetupContext("min", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":145 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":145 * * def min(self): * return self.b.min_val # <<<<<<<<<<<<<< @@ -19211,7 +19206,7 @@ static PyObject *__pyx_pw_3_sa_6BitSet_15max(PyObject *__pyx_v_self, CYTHON_UNUS return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":147 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":147 * return self.b.min_val * * def max(self): # <<<<<<<<<<<<<< @@ -19228,7 +19223,7 @@ static PyObject *__pyx_pf_3_sa_6BitSet_14max(struct __pyx_obj_3_sa_BitSet *__pyx int __pyx_clineno = 0; 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- /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":158 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":158 * * cdef str dec2bin(long i): * cdef str result = "" # <<<<<<<<<<<<<< @@ -19382,7 +19377,7 @@ static PyObject *__pyx_f_3_sa_dec2bin(long __pyx_v_i) { __Pyx_INCREF(((PyObject *)__pyx_kp_s_45)); __pyx_v_result = __pyx_kp_s_45; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":160 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":160 * cdef str result = "" * cdef unsigned d * for d in range(MIN_BOTTOM_SIZE): # <<<<<<<<<<<<<< @@ -19393,7 +19388,7 @@ static PyObject *__pyx_f_3_sa_dec2bin(long __pyx_v_i) { for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_1; __pyx_t_2+=1) { __pyx_v_d = __pyx_t_2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":161 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":161 * cdef unsigned d * for d in range(MIN_BOTTOM_SIZE): * if i & LOWER_MASK[0] == 0: # <<<<<<<<<<<<<< @@ -19403,7 +19398,7 @@ static PyObject *__pyx_f_3_sa_dec2bin(long __pyx_v_i) { __pyx_t_3 = ((__pyx_v_i & (__pyx_v_3_sa_LOWER_MASK[0])) == 0); 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- /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":184 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":184 * * num_bits = int(ceil(log(n) / log(2))) * veb.num_bottom_bits = num_bits/2 # <<<<<<<<<<<<<< @@ -19523,7 +19518,7 @@ static struct __pyx_t_3_sa__VEB *__pyx_f_3_sa_new_VEB(int __pyx_v_n) { */ __pyx_v_veb->num_bottom_bits = __Pyx_div_long(__pyx_v_num_bits, 2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":185 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":185 * num_bits = int(ceil(log(n) / log(2))) * veb.num_bottom_bits = num_bits/2 * if veb.num_bottom_bits < MIN_BOTTOM_BITS: # <<<<<<<<<<<<<< @@ -19533,7 +19528,7 @@ static struct __pyx_t_3_sa__VEB *__pyx_f_3_sa_new_VEB(int __pyx_v_n) { __pyx_t_3 = (__pyx_v_veb->num_bottom_bits < __pyx_v_3_sa_MIN_BOTTOM_BITS); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":186 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":186 * veb.num_bottom_bits = num_bits/2 * if veb.num_bottom_bits < MIN_BOTTOM_BITS: * veb.num_bottom_bits = MIN_BOTTOM_BITS # <<<<<<<<<<<<<< @@ -19545,7 +19540,7 @@ static struct __pyx_t_3_sa__VEB *__pyx_f_3_sa_new_VEB(int __pyx_v_n) { } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":187 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":187 * if veb.num_bottom_bits < MIN_BOTTOM_BITS: * veb.num_bottom_bits = MIN_BOTTOM_BITS * veb.top_universe_size = (n >> veb.num_bottom_bits) + 1 # <<<<<<<<<<<<<< @@ -19554,7 +19549,7 @@ static struct __pyx_t_3_sa__VEB *__pyx_f_3_sa_new_VEB(int __pyx_v_n) { */ __pyx_v_veb->top_universe_size = ((__pyx_v_n >> __pyx_v_veb->num_bottom_bits) + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":189 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":189 * veb.top_universe_size = (n >> veb.num_bottom_bits) + 1 * * veb.bottom = <void**> malloc(veb.top_universe_size * sizeof(void*)) # <<<<<<<<<<<<<< @@ -19563,7 +19558,7 @@ static struct __pyx_t_3_sa__VEB *__pyx_f_3_sa_new_VEB(int __pyx_v_n) { */ __pyx_v_veb->bottom = ((void **)malloc((__pyx_v_veb->top_universe_size * (sizeof(void *))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":190 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":190 * * veb.bottom = <void**> malloc(veb.top_universe_size * sizeof(void*)) * memset(veb.bottom, 0, veb.top_universe_size * sizeof(void*)) # <<<<<<<<<<<<<< @@ -19572,7 +19567,7 @@ static struct __pyx_t_3_sa__VEB *__pyx_f_3_sa_new_VEB(int __pyx_v_n) { */ memset(__pyx_v_veb->bottom, 0, (__pyx_v_veb->top_universe_size * (sizeof(void *)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":192 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":192 * memset(veb.bottom, 0, veb.top_universe_size * sizeof(void*)) * * if veb.top_universe_size > MIN_BOTTOM_SIZE: # <<<<<<<<<<<<<< @@ -19582,7 +19577,7 @@ static struct __pyx_t_3_sa__VEB *__pyx_f_3_sa_new_VEB(int __pyx_v_n) { __pyx_t_3 = (__pyx_v_veb->top_universe_size > __pyx_v_3_sa_MIN_BOTTOM_SIZE); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":193 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":193 * * if veb.top_universe_size > MIN_BOTTOM_SIZE: * veb.top = new_VEB(veb.top_universe_size) # <<<<<<<<<<<<<< @@ -19594,7 +19589,7 @@ static struct __pyx_t_3_sa__VEB *__pyx_f_3_sa_new_VEB(int __pyx_v_n) { } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":195 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":195 * veb.top = new_VEB(veb.top_universe_size) * else: * veb.top = new_BitSet() # <<<<<<<<<<<<<< @@ -19605,7 +19600,7 @@ static struct __pyx_t_3_sa__VEB *__pyx_f_3_sa_new_VEB(int __pyx_v_n) { } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":197 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":197 * veb.top = new_BitSet() * * veb.max_val = -1 # <<<<<<<<<<<<<< @@ -19614,7 +19609,7 @@ static struct __pyx_t_3_sa__VEB *__pyx_f_3_sa_new_VEB(int __pyx_v_n) { */ __pyx_v_veb->max_val = -1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":198 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":198 * * veb.max_val = -1 * veb.min_val = -1 # <<<<<<<<<<<<<< @@ -19623,7 +19618,7 @@ static struct __pyx_t_3_sa__VEB *__pyx_f_3_sa_new_VEB(int __pyx_v_n) { */ __pyx_v_veb->min_val = -1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":199 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":199 * veb.max_val = -1 * veb.min_val = -1 * veb.size = 0 # <<<<<<<<<<<<<< @@ -19632,7 +19627,7 @@ static struct __pyx_t_3_sa__VEB *__pyx_f_3_sa_new_VEB(int __pyx_v_n) { */ __pyx_v_veb->size = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":200 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":200 * veb.min_val = -1 * veb.size = 0 * return veb # <<<<<<<<<<<<<< @@ -19652,7 +19647,7 @@ static struct __pyx_t_3_sa__VEB *__pyx_f_3_sa_new_VEB(int __pyx_v_n) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":203 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":203 * * * cdef int VEB_insert(_VEB* veb, int i): # <<<<<<<<<<<<<< @@ -19673,7 +19668,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ int __pyx_t_3; __Pyx_RefNannySetupContext("VEB_insert", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":208 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":208 * cdef int a, b, tmp * * if veb.size == 0: # <<<<<<<<<<<<<< @@ -19683,7 +19678,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ __pyx_t_1 = (__pyx_v_veb->size == 0); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":209 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":209 * * if veb.size == 0: * veb.min_val = i # <<<<<<<<<<<<<< @@ -19692,7 +19687,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ */ __pyx_v_veb->min_val = __pyx_v_i; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":210 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":210 * if veb.size == 0: * veb.min_val = i * veb.max_val = i # <<<<<<<<<<<<<< @@ -19703,7 +19698,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ goto __pyx_L3; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":211 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":211 * veb.min_val = i * veb.max_val = i * elif i == veb.min_val or i == veb.max_val: # <<<<<<<<<<<<<< @@ -19719,7 +19714,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ } if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":212 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":212 * veb.max_val = i * elif i == veb.min_val or i == veb.max_val: * return 0 # <<<<<<<<<<<<<< @@ -19732,7 +19727,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":214 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":214 * return 0 * else: * if i < veb.min_val: # <<<<<<<<<<<<<< @@ -19742,7 +19737,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ __pyx_t_3 = (__pyx_v_i < __pyx_v_veb->min_val); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":215 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":215 * else: * if i < veb.min_val: * tmp = i # <<<<<<<<<<<<<< @@ -19751,7 +19746,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ */ __pyx_v_tmp = __pyx_v_i; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":216 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":216 * if i < veb.min_val: * tmp = i * i = veb.min_val # <<<<<<<<<<<<<< @@ -19760,7 +19755,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ */ __pyx_v_i = __pyx_v_veb->min_val; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":217 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":217 * tmp = i * i = veb.min_val * veb.min_val = tmp # <<<<<<<<<<<<<< @@ -19772,7 +19767,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":218 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":218 * i = veb.min_val * veb.min_val = tmp * a = i >> veb.num_bottom_bits # <<<<<<<<<<<<<< @@ -19781,7 +19776,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ */ __pyx_v_a = (__pyx_v_i >> __pyx_v_veb->num_bottom_bits); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":219 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":219 * veb.min_val = tmp * a = i >> veb.num_bottom_bits * b = i & LOWER_MASK[veb.num_bottom_bits-1] # <<<<<<<<<<<<<< @@ -19790,7 +19785,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ */ __pyx_v_b = (__pyx_v_i & (__pyx_v_3_sa_LOWER_MASK[(__pyx_v_veb->num_bottom_bits - 1)])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":220 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":220 * a = i >> veb.num_bottom_bits * b = i & LOWER_MASK[veb.num_bottom_bits-1] * if veb.bottom[a] == NULL: # <<<<<<<<<<<<<< @@ -19800,7 +19795,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ __pyx_t_3 = ((__pyx_v_veb->bottom[__pyx_v_a]) == NULL); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":221 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":221 * b = i & LOWER_MASK[veb.num_bottom_bits-1] * if veb.bottom[a] == NULL: * if veb.top_universe_size > MIN_BOTTOM_SIZE: # <<<<<<<<<<<<<< @@ -19810,7 +19805,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ __pyx_t_3 = (__pyx_v_veb->top_universe_size > __pyx_v_3_sa_MIN_BOTTOM_SIZE); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":222 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":222 * if veb.bottom[a] == NULL: * if veb.top_universe_size > MIN_BOTTOM_SIZE: * subv = <_VEB*> veb.top # <<<<<<<<<<<<<< @@ -19819,7 +19814,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ */ __pyx_v_subv = ((struct __pyx_t_3_sa__VEB *)__pyx_v_veb->top); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":223 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":223 * if veb.top_universe_size > MIN_BOTTOM_SIZE: * subv = <_VEB*> veb.top * VEB_insert(subv, a) # <<<<<<<<<<<<<< @@ -19831,7 +19826,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":225 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":225 * VEB_insert(subv, a) * else: * subb = <_BitSet*> veb.top # <<<<<<<<<<<<<< @@ -19840,7 +19835,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ */ __pyx_v_subb = ((struct __pyx_t_3_sa__BitSet *)__pyx_v_veb->top); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":226 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":226 * else: * subb = <_BitSet*> veb.top * bitset_insert(subb, a) # <<<<<<<<<<<<<< @@ -19851,7 +19846,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ } __pyx_L6:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":227 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":227 * subb = <_BitSet*> veb.top * bitset_insert(subb, a) * if veb.num_bottom_bits > MIN_BOTTOM_BITS: # <<<<<<<<<<<<<< @@ -19861,7 +19856,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ __pyx_t_3 = (__pyx_v_veb->num_bottom_bits > __pyx_v_3_sa_MIN_BOTTOM_BITS); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":228 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":228 * bitset_insert(subb, a) * if veb.num_bottom_bits > MIN_BOTTOM_BITS: * veb.bottom[a] = new_VEB(1 << veb.num_bottom_bits) # <<<<<<<<<<<<<< @@ -19873,7 +19868,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":230 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":230 * veb.bottom[a] = new_VEB(1 << veb.num_bottom_bits) * else: * veb.bottom[a] = new_BitSet() # <<<<<<<<<<<<<< @@ -19887,7 +19882,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":231 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":231 * else: * veb.bottom[a] = new_BitSet() * if veb.num_bottom_bits > MIN_BOTTOM_BITS: # <<<<<<<<<<<<<< @@ -19897,7 +19892,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ __pyx_t_3 = (__pyx_v_veb->num_bottom_bits > __pyx_v_3_sa_MIN_BOTTOM_BITS); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":232 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":232 * veb.bottom[a] = new_BitSet() * if veb.num_bottom_bits > MIN_BOTTOM_BITS: * subv = <_VEB*> veb.bottom[a] # <<<<<<<<<<<<<< @@ -19906,7 +19901,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ */ __pyx_v_subv = ((struct __pyx_t_3_sa__VEB *)(__pyx_v_veb->bottom[__pyx_v_a])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":233 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":233 * if veb.num_bottom_bits > MIN_BOTTOM_BITS: * subv = <_VEB*> veb.bottom[a] * if VEB_insert(subv, b) == 0: # <<<<<<<<<<<<<< @@ -19916,7 +19911,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ __pyx_t_3 = (__pyx_f_3_sa_VEB_insert(__pyx_v_subv, __pyx_v_b) == 0); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":234 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":234 * subv = <_VEB*> veb.bottom[a] * if VEB_insert(subv, b) == 0: * return 0 # <<<<<<<<<<<<<< @@ -19932,7 +19927,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":236 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":236 * return 0 * else: * subb = <_BitSet*> veb.bottom[a] # <<<<<<<<<<<<<< @@ -19941,7 +19936,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ */ __pyx_v_subb = ((struct __pyx_t_3_sa__BitSet *)(__pyx_v_veb->bottom[__pyx_v_a])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":237 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":237 * else: * subb = <_BitSet*> veb.bottom[a] * if bitset_insert(subb, b) == 0: # <<<<<<<<<<<<<< @@ -19951,7 +19946,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ __pyx_t_3 = (__pyx_f_3_sa_bitset_insert(__pyx_v_subb, __pyx_v_b) == 0); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":238 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":238 * subb = <_BitSet*> veb.bottom[a] * if bitset_insert(subb, b) == 0: * return 0 # <<<<<<<<<<<<<< @@ -19966,7 +19961,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ } __pyx_L8:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":240 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":240 * return 0 * * if i > veb.max_val: # <<<<<<<<<<<<<< @@ -19976,7 +19971,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ __pyx_t_3 = (__pyx_v_i > __pyx_v_veb->max_val); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":241 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":241 * * if i > veb.max_val: * veb.max_val = i # <<<<<<<<<<<<<< @@ -19990,7 +19985,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":242 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":242 * if i > veb.max_val: * veb.max_val = i * veb.size = veb.size + 1 # <<<<<<<<<<<<<< @@ -19999,7 +19994,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ */ __pyx_v_veb->size = (__pyx_v_veb->size + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":243 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":243 * veb.max_val = i * veb.size = veb.size + 1 * return 1 # <<<<<<<<<<<<<< @@ -20015,7 +20010,7 @@ static int __pyx_f_3_sa_VEB_insert(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":246 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":246 * * * cdef del_VEB(_VEB* veb): # <<<<<<<<<<<<<< @@ -20034,7 +20029,7 @@ static PyObject *__pyx_f_3_sa_del_VEB(struct __pyx_t_3_sa__VEB *__pyx_v_veb) { int __pyx_clineno = 0; __Pyx_RefNannySetupContext("del_VEB", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":249 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":249 * cdef int i * * if veb.top_universe_size > MIN_BOTTOM_SIZE: # <<<<<<<<<<<<<< @@ -20044,7 +20039,7 @@ static PyObject *__pyx_f_3_sa_del_VEB(struct __pyx_t_3_sa__VEB *__pyx_v_veb) { __pyx_t_1 = (__pyx_v_veb->top_universe_size > __pyx_v_3_sa_MIN_BOTTOM_SIZE); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":250 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":250 * * if veb.top_universe_size > MIN_BOTTOM_SIZE: * i = (<_VEB*> veb.top).min_val # <<<<<<<<<<<<<< @@ -20056,7 +20051,7 @@ static PyObject *__pyx_f_3_sa_del_VEB(struct __pyx_t_3_sa__VEB *__pyx_v_veb) { } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":252 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":252 * i = (<_VEB*> veb.top).min_val * else: * i = (<_BitSet*> veb.top).min_val # <<<<<<<<<<<<<< @@ -20067,7 +20062,7 @@ static PyObject *__pyx_f_3_sa_del_VEB(struct __pyx_t_3_sa__VEB *__pyx_v_veb) { } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":254 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":254 * i = (<_BitSet*> veb.top).min_val * * while i != -1: # <<<<<<<<<<<<<< @@ -20078,7 +20073,7 @@ static PyObject *__pyx_f_3_sa_del_VEB(struct __pyx_t_3_sa__VEB *__pyx_v_veb) { __pyx_t_1 = (__pyx_v_i != -1); if (!__pyx_t_1) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":255 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":255 * * while i != -1: * if veb.num_bottom_bits > MIN_BOTTOM_BITS: # <<<<<<<<<<<<<< @@ -20088,7 +20083,7 @@ static PyObject *__pyx_f_3_sa_del_VEB(struct __pyx_t_3_sa__VEB *__pyx_v_veb) { __pyx_t_1 = (__pyx_v_veb->num_bottom_bits > __pyx_v_3_sa_MIN_BOTTOM_BITS); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":256 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":256 * while i != -1: * if veb.num_bottom_bits > MIN_BOTTOM_BITS: * del_VEB(<_VEB*> veb.bottom[i]) # <<<<<<<<<<<<<< @@ -20102,7 +20097,7 @@ static PyObject *__pyx_f_3_sa_del_VEB(struct __pyx_t_3_sa__VEB *__pyx_v_veb) { } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":258 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":258 * del_VEB(<_VEB*> veb.bottom[i]) * else: * free(<_BitSet*> veb.bottom[i]) # <<<<<<<<<<<<<< @@ -20113,7 +20108,7 @@ static PyObject *__pyx_f_3_sa_del_VEB(struct __pyx_t_3_sa__VEB *__pyx_v_veb) { } __pyx_L6:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":260 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":260 * free(<_BitSet*> veb.bottom[i]) * * if veb.top_universe_size > MIN_BOTTOM_SIZE: # <<<<<<<<<<<<<< @@ -20123,7 +20118,7 @@ static PyObject *__pyx_f_3_sa_del_VEB(struct __pyx_t_3_sa__VEB *__pyx_v_veb) { __pyx_t_1 = (__pyx_v_veb->top_universe_size > __pyx_v_3_sa_MIN_BOTTOM_SIZE); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":261 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":261 * * if veb.top_universe_size > MIN_BOTTOM_SIZE: * i = VEB_findsucc(<_VEB*> veb.top, i) # <<<<<<<<<<<<<< @@ -20135,7 +20130,7 @@ static PyObject *__pyx_f_3_sa_del_VEB(struct __pyx_t_3_sa__VEB *__pyx_v_veb) { } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":263 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":263 * i = VEB_findsucc(<_VEB*> veb.top, i) * else: * i = bitset_findsucc(<_BitSet*> veb.top, i) # <<<<<<<<<<<<<< @@ -20147,7 +20142,7 @@ static PyObject *__pyx_f_3_sa_del_VEB(struct __pyx_t_3_sa__VEB *__pyx_v_veb) { __pyx_L7:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":265 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":265 * i = bitset_findsucc(<_BitSet*> veb.top, i) * * if veb.top_universe_size > MIN_BOTTOM_SIZE: # <<<<<<<<<<<<<< @@ -20157,7 +20152,7 @@ static PyObject *__pyx_f_3_sa_del_VEB(struct __pyx_t_3_sa__VEB *__pyx_v_veb) { __pyx_t_1 = (__pyx_v_veb->top_universe_size > __pyx_v_3_sa_MIN_BOTTOM_SIZE); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":266 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":266 * * if veb.top_universe_size > MIN_BOTTOM_SIZE: * del_VEB(<_VEB*> veb.top) # <<<<<<<<<<<<<< @@ -20171,7 +20166,7 @@ static PyObject *__pyx_f_3_sa_del_VEB(struct __pyx_t_3_sa__VEB *__pyx_v_veb) { } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":268 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":268 * del_VEB(<_VEB*> veb.top) * else: * free(<_BitSet*> veb.top) # <<<<<<<<<<<<<< @@ -20182,7 +20177,7 @@ static PyObject *__pyx_f_3_sa_del_VEB(struct __pyx_t_3_sa__VEB *__pyx_v_veb) { } __pyx_L8:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":269 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":269 * else: * free(<_BitSet*> veb.top) * free(veb.bottom) # <<<<<<<<<<<<<< @@ -20191,7 +20186,7 @@ static PyObject *__pyx_f_3_sa_del_VEB(struct __pyx_t_3_sa__VEB *__pyx_v_veb) { */ free(__pyx_v_veb->bottom); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":270 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":270 * free(<_BitSet*> veb.top) * free(veb.bottom) * free(veb) # <<<<<<<<<<<<<< @@ -20212,7 +20207,7 @@ static PyObject *__pyx_f_3_sa_del_VEB(struct __pyx_t_3_sa__VEB *__pyx_v_veb) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":273 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":273 * * * cdef int VEB_findsucc(_VEB* veb, int i): # <<<<<<<<<<<<<< @@ -20235,7 +20230,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int int __pyx_t_3; __Pyx_RefNannySetupContext("VEB_findsucc", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":278 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":278 * cdef int a, b, j, c, found * * if veb.max_val == -1 or i>=veb.max_val: # <<<<<<<<<<<<<< @@ -20251,7 +20246,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int } if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":279 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":279 * * if veb.max_val == -1 or i>=veb.max_val: * return -1 # <<<<<<<<<<<<<< @@ -20264,7 +20259,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":280 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":280 * if veb.max_val == -1 or i>=veb.max_val: * return -1 * if i < veb.min_val: # <<<<<<<<<<<<<< @@ -20274,7 +20269,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __pyx_t_3 = (__pyx_v_i < __pyx_v_veb->min_val); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":281 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":281 * return -1 * if i < veb.min_val: * return veb.min_val # <<<<<<<<<<<<<< @@ -20287,7 +20282,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":283 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":283 * return veb.min_val * * a = i >> veb.num_bottom_bits # <<<<<<<<<<<<<< @@ -20296,7 +20291,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int */ __pyx_v_a = (__pyx_v_i >> __pyx_v_veb->num_bottom_bits); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":284 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":284 * * a = i >> veb.num_bottom_bits * b = i & LOWER_MASK[veb.num_bottom_bits-1] # <<<<<<<<<<<<<< @@ -20305,7 +20300,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int */ __pyx_v_b = (__pyx_v_i & (__pyx_v_3_sa_LOWER_MASK[(__pyx_v_veb->num_bottom_bits - 1)])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":285 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":285 * a = i >> veb.num_bottom_bits * b = i & LOWER_MASK[veb.num_bottom_bits-1] * found = 0 # <<<<<<<<<<<<<< @@ -20314,7 +20309,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int */ __pyx_v_found = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":286 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":286 * b = i & LOWER_MASK[veb.num_bottom_bits-1] * found = 0 * if veb.bottom[a] != NULL: # <<<<<<<<<<<<<< @@ -20324,7 +20319,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __pyx_t_3 = ((__pyx_v_veb->bottom[__pyx_v_a]) != NULL); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":287 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":287 * found = 0 * if veb.bottom[a] != NULL: * if veb.num_bottom_bits > MIN_BOTTOM_BITS: # <<<<<<<<<<<<<< @@ -20334,7 +20329,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __pyx_t_3 = (__pyx_v_veb->num_bottom_bits > __pyx_v_3_sa_MIN_BOTTOM_BITS); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":288 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":288 * if veb.bottom[a] != NULL: * if veb.num_bottom_bits > MIN_BOTTOM_BITS: * subv = <_VEB*> veb.bottom[a] # <<<<<<<<<<<<<< @@ -20343,7 +20338,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int */ __pyx_v_subv = ((struct __pyx_t_3_sa__VEB *)(__pyx_v_veb->bottom[__pyx_v_a])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":289 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":289 * if veb.num_bottom_bits > MIN_BOTTOM_BITS: * subv = <_VEB*> veb.bottom[a] * if subv.max_val > b: # <<<<<<<<<<<<<< @@ -20353,7 +20348,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __pyx_t_3 = (__pyx_v_subv->max_val > __pyx_v_b); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":290 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":290 * subv = <_VEB*> veb.bottom[a] * if subv.max_val > b: * j = (a << veb.num_bottom_bits) + VEB_findsucc(subv, b) # <<<<<<<<<<<<<< @@ -20362,7 +20357,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int */ __pyx_v_j = ((__pyx_v_a << __pyx_v_veb->num_bottom_bits) + __pyx_f_3_sa_VEB_findsucc(__pyx_v_subv, __pyx_v_b)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":291 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":291 * if subv.max_val > b: * j = (a << veb.num_bottom_bits) + VEB_findsucc(subv, b) * found = 1 # <<<<<<<<<<<<<< @@ -20377,7 +20372,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":293 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":293 * found = 1 * else: * subb = <_BitSet*> veb.bottom[a] # <<<<<<<<<<<<<< @@ -20386,7 +20381,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int */ __pyx_v_subb = ((struct __pyx_t_3_sa__BitSet *)(__pyx_v_veb->bottom[__pyx_v_a])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":294 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":294 * else: * subb = <_BitSet*> veb.bottom[a] * if subb.max_val > b: # <<<<<<<<<<<<<< @@ -20396,7 +20391,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __pyx_t_3 = (__pyx_v_subb->max_val > __pyx_v_b); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":295 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":295 * subb = <_BitSet*> veb.bottom[a] * if subb.max_val > b: * j = (a << veb.num_bottom_bits) + bitset_findsucc(subb, b) # <<<<<<<<<<<<<< @@ -20405,7 +20400,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int */ __pyx_v_j = ((__pyx_v_a << __pyx_v_veb->num_bottom_bits) + __pyx_f_3_sa_bitset_findsucc(__pyx_v_subb, __pyx_v_b)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":296 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":296 * if subb.max_val > b: * j = (a << veb.num_bottom_bits) + bitset_findsucc(subb, b) * found = 1 # <<<<<<<<<<<<<< @@ -20422,7 +20417,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":297 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":297 * j = (a << veb.num_bottom_bits) + bitset_findsucc(subb, b) * found = 1 * if found==0: # <<<<<<<<<<<<<< @@ -20432,7 +20427,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __pyx_t_3 = (__pyx_v_found == 0); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":298 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":298 * found = 1 * if found==0: * if veb.top_universe_size > MIN_BOTTOM_SIZE: # <<<<<<<<<<<<<< @@ -20442,7 +20437,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __pyx_t_3 = (__pyx_v_veb->top_universe_size > __pyx_v_3_sa_MIN_BOTTOM_SIZE); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":299 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":299 * if found==0: * if veb.top_universe_size > MIN_BOTTOM_SIZE: * subv = <_VEB*> veb.top # <<<<<<<<<<<<<< @@ -20451,7 +20446,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int */ __pyx_v_subv = ((struct __pyx_t_3_sa__VEB *)__pyx_v_veb->top); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":300 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":300 * if veb.top_universe_size > MIN_BOTTOM_SIZE: * subv = <_VEB*> veb.top * c = VEB_findsucc(subv, a) # <<<<<<<<<<<<<< @@ -20463,7 +20458,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":302 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":302 * c = VEB_findsucc(subv, a) * else: * subb = <_BitSet*> veb.top # <<<<<<<<<<<<<< @@ -20472,7 +20467,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int */ __pyx_v_subb = ((struct __pyx_t_3_sa__BitSet *)__pyx_v_veb->top); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":303 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":303 * else: * subb = <_BitSet*> veb.top * c = bitset_findsucc(subb, a) # <<<<<<<<<<<<<< @@ -20483,7 +20478,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int } __pyx_L10:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":304 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":304 * subb = <_BitSet*> veb.top * c = bitset_findsucc(subb, a) * if veb.num_bottom_bits > MIN_BOTTOM_BITS: # <<<<<<<<<<<<<< @@ -20493,7 +20488,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __pyx_t_3 = (__pyx_v_veb->num_bottom_bits > __pyx_v_3_sa_MIN_BOTTOM_BITS); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":305 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":305 * c = bitset_findsucc(subb, a) * if veb.num_bottom_bits > MIN_BOTTOM_BITS: * subv = <_VEB*> veb.bottom[c] # <<<<<<<<<<<<<< @@ -20502,7 +20497,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int */ __pyx_v_subv = ((struct __pyx_t_3_sa__VEB *)(__pyx_v_veb->bottom[__pyx_v_c])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":306 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":306 * if veb.num_bottom_bits > MIN_BOTTOM_BITS: * subv = <_VEB*> veb.bottom[c] * j = (c << veb.num_bottom_bits) + subv.min_val # <<<<<<<<<<<<<< @@ -20514,7 +20509,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":308 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":308 * j = (c << veb.num_bottom_bits) + subv.min_val * else: * subb = <_BitSet*> veb.bottom[c] # <<<<<<<<<<<<<< @@ -20523,7 +20518,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int */ __pyx_v_subb = ((struct __pyx_t_3_sa__BitSet *)(__pyx_v_veb->bottom[__pyx_v_c])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":309 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":309 * else: * subb = <_BitSet*> veb.bottom[c] * j = (c << veb.num_bottom_bits) + subb.min_val # <<<<<<<<<<<<<< @@ -20537,7 +20532,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int } __pyx_L9:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":310 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":310 * subb = <_BitSet*> veb.bottom[c] * j = (c << veb.num_bottom_bits) + subb.min_val * return j # <<<<<<<<<<<<<< @@ -20553,7 +20548,7 @@ static int __pyx_f_3_sa_VEB_findsucc(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":313 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":313 * * * cdef int VEB_contains(_VEB* veb, int i): # <<<<<<<<<<<<<< @@ -20574,7 +20569,7 @@ static int __pyx_f_3_sa_VEB_contains(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int int __pyx_t_4; __Pyx_RefNannySetupContext("VEB_contains", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":318 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":318 * cdef int a, b * * if veb.size == 0 or i < veb.min_val or i > veb.max_val: # <<<<<<<<<<<<<< @@ -20596,7 +20591,7 @@ static int __pyx_f_3_sa_VEB_contains(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int } if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":319 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":319 * * if veb.size == 0 or i < veb.min_val or i > veb.max_val: * return 0 # <<<<<<<<<<<<<< @@ -20609,7 +20604,7 @@ static int __pyx_f_3_sa_VEB_contains(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":321 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":321 * return 0 * * if veb.min_val == i: # <<<<<<<<<<<<<< @@ -20619,7 +20614,7 @@ static int __pyx_f_3_sa_VEB_contains(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __pyx_t_2 = (__pyx_v_veb->min_val == __pyx_v_i); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":322 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":322 * * if veb.min_val == i: * return 1 # <<<<<<<<<<<<<< @@ -20632,7 +20627,7 @@ static int __pyx_f_3_sa_VEB_contains(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":324 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":324 * return 1 * else: * if veb.size == 1: # <<<<<<<<<<<<<< @@ -20642,7 +20637,7 @@ static int __pyx_f_3_sa_VEB_contains(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __pyx_t_2 = (__pyx_v_veb->size == 1); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":325 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":325 * else: * if veb.size == 1: * return 0 # <<<<<<<<<<<<<< @@ -20657,7 +20652,7 @@ static int __pyx_f_3_sa_VEB_contains(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":327 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":327 * return 0 * * a = i >> veb.num_bottom_bits # <<<<<<<<<<<<<< @@ -20666,7 +20661,7 @@ static int __pyx_f_3_sa_VEB_contains(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int */ __pyx_v_a = (__pyx_v_i >> __pyx_v_veb->num_bottom_bits); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":328 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":328 * * a = i >> veb.num_bottom_bits * b = i & LOWER_MASK[veb.num_bottom_bits-1] # <<<<<<<<<<<<<< @@ -20675,7 +20670,7 @@ static int __pyx_f_3_sa_VEB_contains(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int */ __pyx_v_b = (__pyx_v_i & (__pyx_v_3_sa_LOWER_MASK[(__pyx_v_veb->num_bottom_bits - 1)])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":329 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":329 * a = i >> veb.num_bottom_bits * b = i & LOWER_MASK[veb.num_bottom_bits-1] * if veb.bottom[a] == NULL: # <<<<<<<<<<<<<< @@ -20685,7 +20680,7 @@ static int __pyx_f_3_sa_VEB_contains(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __pyx_t_2 = ((__pyx_v_veb->bottom[__pyx_v_a]) == NULL); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":330 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":330 * b = i & LOWER_MASK[veb.num_bottom_bits-1] * if veb.bottom[a] == NULL: * return 0 # <<<<<<<<<<<<<< @@ -20698,7 +20693,7 @@ static int __pyx_f_3_sa_VEB_contains(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":332 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":332 * return 0 * else: * if veb.num_bottom_bits > MIN_BOTTOM_BITS: # <<<<<<<<<<<<<< @@ -20708,7 +20703,7 @@ static int __pyx_f_3_sa_VEB_contains(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int __pyx_t_2 = (__pyx_v_veb->num_bottom_bits > __pyx_v_3_sa_MIN_BOTTOM_BITS); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":333 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":333 * else: * if veb.num_bottom_bits > MIN_BOTTOM_BITS: * subv = <_VEB*> veb.bottom[a] # <<<<<<<<<<<<<< @@ -20717,7 +20712,7 @@ static int __pyx_f_3_sa_VEB_contains(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int */ __pyx_v_subv = ((struct __pyx_t_3_sa__VEB *)(__pyx_v_veb->bottom[__pyx_v_a])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":334 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":334 * if veb.num_bottom_bits > MIN_BOTTOM_BITS: * subv = <_VEB*> veb.bottom[a] * return VEB_contains(subv, b) # <<<<<<<<<<<<<< @@ -20730,7 +20725,7 @@ static int __pyx_f_3_sa_VEB_contains(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":336 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":336 * return VEB_contains(subv, b) * else: * subb = <_BitSet*> veb.bottom[a] # <<<<<<<<<<<<<< @@ -20739,7 +20734,7 @@ static int __pyx_f_3_sa_VEB_contains(struct __pyx_t_3_sa__VEB *__pyx_v_veb, int */ __pyx_v_subb = ((struct __pyx_t_3_sa__BitSet *)(__pyx_v_veb->bottom[__pyx_v_a])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":337 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":337 * else: * subb = <_BitSet*> veb.bottom[a] * return bitset_contains(subb, b) # <<<<<<<<<<<<<< @@ -20770,7 +20765,7 @@ static PyObject *__pyx_pw_3_sa_11VEBIterator_1__next__(PyObject *__pyx_v_self) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":344 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":344 * cdef int next_val * * def __next__(self): # <<<<<<<<<<<<<< @@ -20789,7 +20784,7 @@ static PyObject *__pyx_pf_3_sa_11VEBIterator___next__(struct __pyx_obj_3_sa_VEBI int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__next__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":347 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":347 * cdef int ret_val * * if self.next_val == -1: # <<<<<<<<<<<<<< @@ -20799,7 +20794,7 @@ static PyObject *__pyx_pf_3_sa_11VEBIterator___next__(struct __pyx_obj_3_sa_VEBI __pyx_t_1 = (__pyx_v_self->next_val == -1); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":348 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":348 * * if self.next_val == -1: * raise StopIteration() # <<<<<<<<<<<<<< @@ -20815,7 +20810,7 @@ static PyObject *__pyx_pf_3_sa_11VEBIterator___next__(struct __pyx_obj_3_sa_VEBI } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":349 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":349 * if self.next_val == -1: * raise StopIteration() * ret_val = self.next_val # <<<<<<<<<<<<<< @@ -20824,7 +20819,7 @@ static PyObject *__pyx_pf_3_sa_11VEBIterator___next__(struct __pyx_obj_3_sa_VEBI */ __pyx_v_ret_val = __pyx_v_self->next_val; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":350 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":350 * raise StopIteration() * ret_val = self.next_val * self.next_val = VEB_findsucc(self.v, ret_val) # <<<<<<<<<<<<<< @@ -20833,7 +20828,7 @@ static PyObject *__pyx_pf_3_sa_11VEBIterator___next__(struct __pyx_obj_3_sa_VEBI */ __pyx_v_self->next_val = __pyx_f_3_sa_VEB_findsucc(__pyx_v_self->v, __pyx_v_ret_val); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":351 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":351 * ret_val = self.next_val * self.next_val = VEB_findsucc(self.v, ret_val) * return ret_val # <<<<<<<<<<<<<< @@ -20906,7 +20901,7 @@ static int __pyx_pw_3_sa_3VEB_1__cinit__(PyObject *__pyx_v_self, PyObject *__pyx return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":360 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":360 * cdef int _first(self) * * def __cinit__(self, int size): # <<<<<<<<<<<<<< @@ -20919,7 +20914,7 @@ static int __pyx_pf_3_sa_3VEB___cinit__(struct __pyx_obj_3_sa_VEB *__pyx_v_self, __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":361 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":361 * * def __cinit__(self, int size): * self.veb = new_VEB(size) # <<<<<<<<<<<<<< @@ -20942,7 +20937,7 @@ static void __pyx_pw_3_sa_3VEB_3__dealloc__(PyObject *__pyx_v_self) { __Pyx_RefNannyFinishContext(); } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":363 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":363 * self.veb = new_VEB(size) * * def __dealloc__(self): # <<<<<<<<<<<<<< @@ -20958,7 +20953,7 @@ static void __pyx_pf_3_sa_3VEB_2__dealloc__(struct __pyx_obj_3_sa_VEB *__pyx_v_s int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__dealloc__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":364 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":364 * * def __dealloc__(self): * del_VEB(self.veb) # <<<<<<<<<<<<<< @@ -20988,7 +20983,7 @@ static PyObject *__pyx_pw_3_sa_3VEB_5__iter__(PyObject *__pyx_v_self) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":366 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":366 * del_VEB(self.veb) * * def __iter__(self): # <<<<<<<<<<<<<< @@ -21006,7 +21001,7 @@ static PyObject *__pyx_pf_3_sa_3VEB_4__iter__(struct __pyx_obj_3_sa_VEB *__pyx_v int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__iter__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":368 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":368 * def __iter__(self): * cdef VEBIterator it * it = VEBIterator() # <<<<<<<<<<<<<< @@ -21018,7 +21013,7 @@ static PyObject *__pyx_pf_3_sa_3VEB_4__iter__(struct __pyx_obj_3_sa_VEB *__pyx_v __pyx_v_it = ((struct __pyx_obj_3_sa_VEBIterator *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":369 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":369 * cdef VEBIterator it * it = VEBIterator() * it.v = self.veb # <<<<<<<<<<<<<< @@ -21027,7 +21022,7 @@ static PyObject *__pyx_pf_3_sa_3VEB_4__iter__(struct __pyx_obj_3_sa_VEB *__pyx_v */ __pyx_v_it->v = __pyx_v_self->veb; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":370 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":370 * it = VEBIterator() * it.v = self.veb * it.next_val = self.veb.min_val # <<<<<<<<<<<<<< @@ -21036,7 +21031,7 @@ static PyObject *__pyx_pf_3_sa_3VEB_4__iter__(struct __pyx_obj_3_sa_VEB *__pyx_v */ __pyx_v_it->next_val = __pyx_v_self->veb->min_val; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":371 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":371 * it.v = self.veb * it.next_val = self.veb.min_val * return it # <<<<<<<<<<<<<< @@ -21072,7 +21067,7 @@ static PyObject *__pyx_pw_3_sa_3VEB_7insert(PyObject *__pyx_v_self, PyObject *__ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":373 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":373 * return it * * def insert(self, i): # <<<<<<<<<<<<<< @@ -21090,7 +21085,7 @@ static PyObject *__pyx_pf_3_sa_3VEB_6insert(struct __pyx_obj_3_sa_VEB *__pyx_v_s int __pyx_clineno = 0; __Pyx_RefNannySetupContext("insert", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":374 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":374 * * def insert(self, i): * return VEB_insert(self.veb, i) # <<<<<<<<<<<<<< @@ -21117,7 +21112,7 @@ static PyObject *__pyx_pf_3_sa_3VEB_6insert(struct __pyx_obj_3_sa_VEB *__pyx_v_s return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":376 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":376 * return VEB_insert(self.veb, i) * * cdef int _insert(self, int i): # <<<<<<<<<<<<<< @@ -21130,7 +21125,7 @@ static int __pyx_f_3_sa_3VEB__insert(struct __pyx_obj_3_sa_VEB *__pyx_v_self, in __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("_insert", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":377 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":377 * * cdef int _insert(self, int i): * return VEB_insert(self.veb, i) # <<<<<<<<<<<<<< @@ -21157,7 +21152,7 @@ static PyObject *__pyx_pw_3_sa_3VEB_9findsucc(PyObject *__pyx_v_self, PyObject * return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":379 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":379 * return VEB_insert(self.veb, i) * * def findsucc(self, i): # <<<<<<<<<<<<<< @@ -21175,7 +21170,7 @@ static PyObject *__pyx_pf_3_sa_3VEB_8findsucc(struct __pyx_obj_3_sa_VEB *__pyx_v int __pyx_clineno = 0; __Pyx_RefNannySetupContext("findsucc", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":380 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":380 * * def findsucc(self, i): * return VEB_findsucc(self.veb, i) # <<<<<<<<<<<<<< @@ -21202,7 +21197,7 @@ static PyObject *__pyx_pf_3_sa_3VEB_8findsucc(struct __pyx_obj_3_sa_VEB *__pyx_v return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":382 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":382 * return VEB_findsucc(self.veb, i) * * cdef int _first(self): # <<<<<<<<<<<<<< @@ -21215,7 +21210,7 @@ static int __pyx_f_3_sa_3VEB__first(struct __pyx_obj_3_sa_VEB *__pyx_v_self) { __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("_first", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":383 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":383 * * cdef int _first(self): * return self.veb.min_val # <<<<<<<<<<<<<< @@ -21231,7 +21226,7 @@ static int __pyx_f_3_sa_3VEB__first(struct __pyx_obj_3_sa_VEB *__pyx_v_self) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":385 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":385 * return self.veb.min_val * * cdef int _findsucc(self, int i): # <<<<<<<<<<<<<< @@ -21244,7 +21239,7 @@ static int __pyx_f_3_sa_3VEB__findsucc(struct __pyx_obj_3_sa_VEB *__pyx_v_self, __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("_findsucc", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":386 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":386 * * cdef int _findsucc(self, int i): * return VEB_findsucc(self.veb, i) # <<<<<<<<<<<<<< @@ -21271,7 +21266,7 @@ static Py_ssize_t __pyx_pw_3_sa_3VEB_11__len__(PyObject *__pyx_v_self) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":388 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":388 * return VEB_findsucc(self.veb, i) * * def __len__(self): # <<<<<<<<<<<<<< @@ -21284,7 +21279,7 @@ static Py_ssize_t __pyx_pf_3_sa_3VEB_10__len__(struct __pyx_obj_3_sa_VEB *__pyx_ __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("__len__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":389 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":389 * * def __len__(self): * return self.veb.size # <<<<<<<<<<<<<< @@ -21311,7 +21306,7 @@ static int __pyx_pw_3_sa_3VEB_13__contains__(PyObject *__pyx_v_self, PyObject *_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":391 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":391 * return self.veb.size * * def __contains__(self, i): # <<<<<<<<<<<<<< @@ -21327,7 +21322,7 @@ static int __pyx_pf_3_sa_3VEB_12__contains__(struct __pyx_obj_3_sa_VEB *__pyx_v_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__contains__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":392 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":392 * * def __contains__(self, i): * return VEB_contains(self.veb, i) # <<<<<<<<<<<<<< @@ -21398,7 +21393,7 @@ static int __pyx_pw_3_sa_3LCP_1__cinit__(PyObject *__pyx_v_self, PyObject *__pyx return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":9 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":9 * cdef IntList lcp * * def __cinit__(self, SuffixArray sa): # <<<<<<<<<<<<<< @@ -21427,7 +21422,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":13 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":13 * cdef IntList rank * * logger.info("Constructing LCP array") # <<<<<<<<<<<<<< @@ -21444,7 +21439,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":14 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":14 * * logger.info("Constructing LCP array") * self.sa = sa # <<<<<<<<<<<<<< @@ -21457,7 +21452,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, __Pyx_DECREF(((PyObject *)__pyx_v_self->sa)); __pyx_v_self->sa = __pyx_v_sa; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":15 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":15 * logger.info("Constructing LCP array") * self.sa = sa * n = self.sa.sa.len # <<<<<<<<<<<<<< @@ -21466,7 +21461,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, */ __pyx_v_n = __pyx_v_self->sa->sa->len; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":16 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":16 * self.sa = sa * n = self.sa.sa.len * self.lcp = IntList(initial_len=n) # <<<<<<<<<<<<<< @@ -21488,7 +21483,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, __pyx_v_self->lcp = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":18 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":18 * self.lcp = IntList(initial_len=n) * * rank = IntList(initial_len=n) # <<<<<<<<<<<<<< @@ -21507,7 +21502,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, __pyx_v_rank = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":19 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":19 * * rank = IntList(initial_len=n) * for i from 0 <= i < n: # <<<<<<<<<<<<<< @@ -21517,7 +21512,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, __pyx_t_3 = __pyx_v_n; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_3; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":20 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":20 * rank = IntList(initial_len=n) * for i from 0 <= i < n: * rank.arr[sa.sa.arr[i]] = i # <<<<<<<<<<<<<< @@ -21527,7 +21522,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, (__pyx_v_rank->arr[(__pyx_v_sa->sa->arr[__pyx_v_i])]) = __pyx_v_i; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":22 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":22 * rank.arr[sa.sa.arr[i]] = i * * h = 0 # <<<<<<<<<<<<<< @@ -21536,7 +21531,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, */ __pyx_v_h = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":23 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":23 * * h = 0 * for i from 0 <= i < n: # <<<<<<<<<<<<<< @@ -21546,7 +21541,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, __pyx_t_3 = __pyx_v_n; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_3; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":24 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":24 * h = 0 * for i from 0 <= i < n: * k = rank.arr[i] # <<<<<<<<<<<<<< @@ -21555,7 +21550,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, */ __pyx_v_k = (__pyx_v_rank->arr[__pyx_v_i]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":25 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":25 * for i from 0 <= i < n: * k = rank.arr[i] * if k == 0: # <<<<<<<<<<<<<< @@ -21565,7 +21560,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, __pyx_t_4 = (__pyx_v_k == 0); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":26 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":26 * k = rank.arr[i] * if k == 0: * self.lcp.arr[k] = -1 # <<<<<<<<<<<<<< @@ -21577,7 +21572,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":28 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":28 * self.lcp.arr[k] = -1 * else: * j = sa.sa.arr[k-1] # <<<<<<<<<<<<<< @@ -21586,7 +21581,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, */ __pyx_v_j = (__pyx_v_sa->sa->arr[(__pyx_v_k - 1)]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":29 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":29 * else: * j = sa.sa.arr[k-1] * while i+h < n and j+h < n and sa.darray.data.arr[i+h] == sa.darray.data.arr[j+h]: # <<<<<<<<<<<<<< @@ -21609,7 +21604,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, } if (!__pyx_t_5) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":30 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":30 * j = sa.sa.arr[k-1] * while i+h < n and j+h < n and sa.darray.data.arr[i+h] == sa.darray.data.arr[j+h]: * h = h+1 # <<<<<<<<<<<<<< @@ -21619,7 +21614,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, __pyx_v_h = (__pyx_v_h + 1); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":31 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":31 * while i+h < n and j+h < n and sa.darray.data.arr[i+h] == sa.darray.data.arr[j+h]: * h = h+1 * self.lcp.arr[k] = h # <<<<<<<<<<<<<< @@ -21630,7 +21625,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, } __pyx_L7:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":32 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":32 * h = h+1 * self.lcp.arr[k] = h * if h > 0: # <<<<<<<<<<<<<< @@ -21640,7 +21635,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, __pyx_t_5 = (__pyx_v_h > 0); if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":33 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":33 * self.lcp.arr[k] = h * if h > 0: * h = h-1 # <<<<<<<<<<<<<< @@ -21653,7 +21648,7 @@ static int __pyx_pf_3_sa_3LCP___cinit__(struct __pyx_obj_3_sa_LCP *__pyx_v_self, __pyx_L10:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":34 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":34 * if h > 0: * h = h-1 * logger.info("LCP array completed") # <<<<<<<<<<<<<< @@ -21706,7 +21701,7 @@ static PyObject *__pyx_pw_3_sa_3LCP_3compute_stats(PyObject *__pyx_v_self, PyObj return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":36 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":36 * logger.info("LCP array completed") * * def compute_stats(self, int max_n): # <<<<<<<<<<<<<< @@ -21777,7 +21772,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_L3_first_run:; if (unlikely(!__pyx_sent_value)) {__pyx_filename = __pyx_f[9]; __pyx_lineno = 36; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":48 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":48 * cdef VEB veb * * N = self.sa.sa.len # <<<<<<<<<<<<<< @@ -21786,7 +21781,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen */ __pyx_cur_scope->__pyx_v_N = __pyx_cur_scope->__pyx_v_self->sa->sa->len; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":50 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":50 * N = self.sa.sa.len * * ngram_starts = [] # <<<<<<<<<<<<<< @@ -21799,7 +21794,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_cur_scope->__pyx_v_ngram_starts = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":51 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":51 * * ngram_starts = [] * for n from 0 <= n < max_n: # <<<<<<<<<<<<<< @@ -21809,7 +21804,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_t_2 = __pyx_cur_scope->__pyx_v_max_n; for (__pyx_cur_scope->__pyx_v_n = 0; __pyx_cur_scope->__pyx_v_n < __pyx_t_2; __pyx_cur_scope->__pyx_v_n++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":52 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":52 * ngram_starts = [] * for n from 0 <= n < max_n: * ngram_starts.append(IntList(initial_len=N)) # <<<<<<<<<<<<<< @@ -21829,7 +21824,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":54 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":54 * ngram_starts.append(IntList(initial_len=N)) * * run_start = IntList(initial_len=max_n) # <<<<<<<<<<<<<< @@ -21849,7 +21844,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_cur_scope->__pyx_v_run_start = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":55 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":55 * * run_start = IntList(initial_len=max_n) * veb = VEB(N) # <<<<<<<<<<<<<< @@ -21870,7 +21865,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_cur_scope->__pyx_v_veb = ((struct __pyx_obj_3_sa_VEB *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":57 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":57 * veb = VEB(N) * * for i from 0 <= i < N: # <<<<<<<<<<<<<< @@ -21880,7 +21875,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_t_2 = __pyx_cur_scope->__pyx_v_N; for (__pyx_cur_scope->__pyx_v_i = 0; __pyx_cur_scope->__pyx_v_i < __pyx_t_2; __pyx_cur_scope->__pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":58 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":58 * * for i from 0 <= i < N: * h = self.lcp.arr[i] # <<<<<<<<<<<<<< @@ -21889,7 +21884,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen */ __pyx_cur_scope->__pyx_v_h = (__pyx_cur_scope->__pyx_v_self->lcp->arr[__pyx_cur_scope->__pyx_v_i]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":59 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":59 * for i from 0 <= i < N: * h = self.lcp.arr[i] * if h < 0: # <<<<<<<<<<<<<< @@ -21899,7 +21894,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_t_5 = (__pyx_cur_scope->__pyx_v_h < 0); if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":60 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":60 * h = self.lcp.arr[i] * if h < 0: * h = 0 # <<<<<<<<<<<<<< @@ -21911,7 +21906,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen } __pyx_L8:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":61 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":61 * if h < 0: * h = 0 * for n from h <= n < max_n: # <<<<<<<<<<<<<< @@ -21921,7 +21916,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_t_6 = __pyx_cur_scope->__pyx_v_max_n; for (__pyx_cur_scope->__pyx_v_n = __pyx_cur_scope->__pyx_v_h; __pyx_cur_scope->__pyx_v_n < __pyx_t_6; __pyx_cur_scope->__pyx_v_n++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":62 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":62 * h = 0 * for n from h <= n < max_n: * rs = run_start.arr[n] # <<<<<<<<<<<<<< @@ -21930,7 +21925,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen */ __pyx_cur_scope->__pyx_v_rs = (__pyx_cur_scope->__pyx_v_run_start->arr[__pyx_cur_scope->__pyx_v_n]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":63 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":63 * for n from h <= n < max_n: * rs = run_start.arr[n] * run_start.arr[n] = i # <<<<<<<<<<<<<< @@ -21939,7 +21934,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen */ (__pyx_cur_scope->__pyx_v_run_start->arr[__pyx_cur_scope->__pyx_v_n]) = __pyx_cur_scope->__pyx_v_i; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":64 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":64 * rs = run_start.arr[n] * run_start.arr[n] = i * freq = i - rs # <<<<<<<<<<<<<< @@ -21948,7 +21943,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen */ __pyx_cur_scope->__pyx_v_freq = (__pyx_cur_scope->__pyx_v_i - __pyx_cur_scope->__pyx_v_rs); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":65 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":65 * run_start.arr[n] = i * freq = i - rs * if freq > 1000: # arbitrary, but see note below # <<<<<<<<<<<<<< @@ -21958,7 +21953,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_t_5 = (__pyx_cur_scope->__pyx_v_freq > 1000); if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":66 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":66 * freq = i - rs * if freq > 1000: # arbitrary, but see note below * veb._insert(freq) # <<<<<<<<<<<<<< @@ -21967,7 +21962,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen */ ((struct __pyx_vtabstruct_3_sa_VEB *)__pyx_cur_scope->__pyx_v_veb->__pyx_vtab)->_insert(__pyx_cur_scope->__pyx_v_veb, __pyx_cur_scope->__pyx_v_freq); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":67 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":67 * if freq > 1000: # arbitrary, but see note below * veb._insert(freq) * ngram_start = ngram_starts[n] # <<<<<<<<<<<<<< @@ -21983,7 +21978,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_cur_scope->__pyx_v_ngram_start = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":68 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":68 * veb._insert(freq) * ngram_start = ngram_starts[n] * while ngram_start.arr[freq] > 0: # <<<<<<<<<<<<<< @@ -21994,7 +21989,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_t_5 = ((__pyx_cur_scope->__pyx_v_ngram_start->arr[__pyx_cur_scope->__pyx_v_freq]) > 0); if (!__pyx_t_5) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":69 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":69 * ngram_start = ngram_starts[n] * while ngram_start.arr[freq] > 0: * freq = freq + 1 # cheating a bit, should be ok for sparse histogram # <<<<<<<<<<<<<< @@ -22004,7 +21999,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_cur_scope->__pyx_v_freq = (__pyx_cur_scope->__pyx_v_freq + 1); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":70 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":70 * while ngram_start.arr[freq] > 0: * freq = freq + 1 # cheating a bit, should be ok for sparse histogram * ngram_start.arr[freq] = rs # <<<<<<<<<<<<<< @@ -22018,7 +22013,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen } } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":71 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":71 * freq = freq + 1 # cheating a bit, should be ok for sparse histogram * ngram_start.arr[freq] = rs * i = veb.veb.min_val # <<<<<<<<<<<<<< @@ -22027,7 +22022,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen */ __pyx_cur_scope->__pyx_v_i = __pyx_cur_scope->__pyx_v_veb->veb->min_val; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":72 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":72 * ngram_start.arr[freq] = rs * i = veb.veb.min_val * while i != -1: # <<<<<<<<<<<<<< @@ -22038,7 +22033,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_t_5 = (__pyx_cur_scope->__pyx_v_i != -1); if (!__pyx_t_5) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":73 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":73 * i = veb.veb.min_val * while i != -1: * ii = veb._findsucc(i) # <<<<<<<<<<<<<< @@ -22047,7 +22042,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen */ __pyx_cur_scope->__pyx_v_ii = ((struct __pyx_vtabstruct_3_sa_VEB *)__pyx_cur_scope->__pyx_v_veb->__pyx_vtab)->_findsucc(__pyx_cur_scope->__pyx_v_veb, __pyx_cur_scope->__pyx_v_i); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":74 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":74 * while i != -1: * ii = veb._findsucc(i) * for n from 0 <= n < max_n: # <<<<<<<<<<<<<< @@ -22057,7 +22052,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_t_2 = __pyx_cur_scope->__pyx_v_max_n; for (__pyx_cur_scope->__pyx_v_n = 0; __pyx_cur_scope->__pyx_v_n < __pyx_t_2; __pyx_cur_scope->__pyx_v_n++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":75 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":75 * ii = veb._findsucc(i) * for n from 0 <= n < max_n: * ngram_start = ngram_starts[n] # <<<<<<<<<<<<<< @@ -22073,7 +22068,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_cur_scope->__pyx_v_ngram_start = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":76 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":76 * for n from 0 <= n < max_n: * ngram_start = ngram_starts[n] * iii = i # <<<<<<<<<<<<<< @@ -22082,7 +22077,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen */ __pyx_cur_scope->__pyx_v_iii = __pyx_cur_scope->__pyx_v_i; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":77 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":77 * ngram_start = ngram_starts[n] * iii = i * rs = ngram_start.arr[iii] # <<<<<<<<<<<<<< @@ -22091,7 +22086,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen */ __pyx_cur_scope->__pyx_v_rs = (__pyx_cur_scope->__pyx_v_ngram_start->arr[__pyx_cur_scope->__pyx_v_iii]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":78 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":78 * iii = i * rs = ngram_start.arr[iii] * while (ii==-1 or iii < ii) and rs != 0: # <<<<<<<<<<<<<< @@ -22114,7 +22109,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen } if (!__pyx_t_7) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":79 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":79 * rs = ngram_start.arr[iii] * while (ii==-1 or iii < ii) and rs != 0: * j = self.sa.sa.arr[rs] # <<<<<<<<<<<<<< @@ -22123,7 +22118,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen */ __pyx_cur_scope->__pyx_v_j = (__pyx_cur_scope->__pyx_v_self->sa->sa->arr[__pyx_cur_scope->__pyx_v_rs]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":80 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":80 * while (ii==-1 or iii < ii) and rs != 0: * j = self.sa.sa.arr[rs] * valid = 1 # <<<<<<<<<<<<<< @@ -22132,7 +22127,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen */ __pyx_cur_scope->__pyx_v_valid = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":81 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":81 * j = self.sa.sa.arr[rs] * valid = 1 * for k from 0 <= k < n+1: # <<<<<<<<<<<<<< @@ -22142,7 +22137,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_t_9 = (__pyx_cur_scope->__pyx_v_n + 1); for (__pyx_cur_scope->__pyx_v_k = 0; __pyx_cur_scope->__pyx_v_k < __pyx_t_9; __pyx_cur_scope->__pyx_v_k++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":82 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":82 * valid = 1 * for k from 0 <= k < n+1: * if self.sa.darray.data.arr[j+k] < 2: # <<<<<<<<<<<<<< @@ -22152,7 +22147,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_t_7 = ((__pyx_cur_scope->__pyx_v_self->sa->darray->data->arr[(__pyx_cur_scope->__pyx_v_j + __pyx_cur_scope->__pyx_v_k)]) < 2); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":83 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":83 * for k from 0 <= k < n+1: * if self.sa.darray.data.arr[j+k] < 2: * valid = 0 # <<<<<<<<<<<<<< @@ -22165,7 +22160,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_L22:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":84 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":84 * if self.sa.darray.data.arr[j+k] < 2: * valid = 0 * if valid: # <<<<<<<<<<<<<< @@ -22174,7 +22169,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen */ if (__pyx_cur_scope->__pyx_v_valid) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":85 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":85 * valid = 0 * if valid: * ngram = tuple([self.sa.darray.data.arr[j+k] for k in range(n+1)]) # <<<<<<<<<<<<<< @@ -22200,7 +22195,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen __pyx_cur_scope->__pyx_v_ngram = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":86 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":86 * if valid: * ngram = tuple([self.sa.darray.data.arr[j+k] for k in range(n+1)]) * yield i, n+1, ngram # <<<<<<<<<<<<<< @@ -22237,7 +22232,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen } __pyx_L23:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":87 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":87 * ngram = tuple([self.sa.darray.data.arr[j+k] for k in range(n+1)]) * yield i, n+1, ngram * iii = iii + 1 # <<<<<<<<<<<<<< @@ -22246,7 +22241,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen */ __pyx_cur_scope->__pyx_v_iii = (__pyx_cur_scope->__pyx_v_iii + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":88 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":88 * yield i, n+1, ngram * iii = iii + 1 * rs = ngram_start.arr[iii] # <<<<<<<<<<<<<< @@ -22256,7 +22251,7 @@ static PyObject *__pyx_gb_3_sa_3LCP_4generator1(__pyx_GeneratorObject *__pyx_gen } } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":89 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":89 * iii = iii + 1 * rs = ngram_start.arr[iii] * i = ii # <<<<<<<<<<<<<< @@ -22292,7 +22287,7 @@ static int __pyx_pw_3_sa_8Alphabet_1__cinit__(PyObject *__pyx_v_self, PyObject * return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":12 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":12 * cdef dict id2sym * * def __cinit__(self): # <<<<<<<<<<<<<< @@ -22309,7 +22304,7 @@ static int __pyx_pf_3_sa_8Alphabet___cinit__(struct __pyx_obj_3_sa_Alphabet *__p int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":13 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":13 * * def __cinit__(self): * self.terminals = StringMap() # <<<<<<<<<<<<<< @@ -22324,7 +22319,7 @@ static int __pyx_pf_3_sa_8Alphabet___cinit__(struct __pyx_obj_3_sa_Alphabet *__p __pyx_v_self->terminals = ((struct __pyx_obj_3_sa_StringMap *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":14 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":14 * def __cinit__(self): * self.terminals = StringMap() * self.nonterminals = StringMap() # <<<<<<<<<<<<<< @@ -22339,7 +22334,7 @@ static int __pyx_pf_3_sa_8Alphabet___cinit__(struct __pyx_obj_3_sa_Alphabet *__p __pyx_v_self->nonterminals = ((struct __pyx_obj_3_sa_StringMap *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":15 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":15 * self.terminals = StringMap() * self.nonterminals = StringMap() * self.id2sym = {} # <<<<<<<<<<<<<< @@ -22354,7 +22349,7 @@ static int __pyx_pf_3_sa_8Alphabet___cinit__(struct __pyx_obj_3_sa_Alphabet *__p __pyx_v_self->id2sym = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":16 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":16 * self.nonterminals = StringMap() * self.id2sym = {} * self.first_nonterminal = -1 # <<<<<<<<<<<<<< @@ -22383,7 +22378,7 @@ static void __pyx_pw_3_sa_8Alphabet_3__dealloc__(PyObject *__pyx_v_self) { __Pyx_RefNannyFinishContext(); } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":18 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":18 * self.first_nonterminal = -1 * * def __dealloc__(self): # <<<<<<<<<<<<<< @@ -22398,7 +22393,7 @@ static void __pyx_pf_3_sa_8Alphabet_2__dealloc__(CYTHON_UNUSED struct __pyx_obj_ __Pyx_RefNannyFinishContext(); } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":21 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":21 * pass * * cdef int isvar(self, int sym): # <<<<<<<<<<<<<< @@ -22411,7 +22406,7 @@ static int __pyx_f_3_sa_8Alphabet_isvar(CYTHON_UNUSED struct __pyx_obj_3_sa_Alph __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("isvar", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":22 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":22 * * cdef int isvar(self, int sym): * return sym < 0 # <<<<<<<<<<<<<< @@ -22427,7 +22422,7 @@ static int __pyx_f_3_sa_8Alphabet_isvar(CYTHON_UNUSED struct __pyx_obj_3_sa_Alph return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":24 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":24 * return sym < 0 * * cdef int isword(self, int sym): # <<<<<<<<<<<<<< @@ -22440,7 +22435,7 @@ static int __pyx_f_3_sa_8Alphabet_isword(CYTHON_UNUSED struct __pyx_obj_3_sa_Alp __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("isword", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":25 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":25 * * cdef int isword(self, int sym): * return sym >= 0 # <<<<<<<<<<<<<< @@ -22456,7 +22451,7 @@ static int __pyx_f_3_sa_8Alphabet_isword(CYTHON_UNUSED struct __pyx_obj_3_sa_Alp return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":27 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":27 * return sym >= 0 * * cdef int getindex(self, int sym): # <<<<<<<<<<<<<< @@ -22469,7 +22464,7 @@ static int __pyx_f_3_sa_8Alphabet_getindex(CYTHON_UNUSED struct __pyx_obj_3_sa_A __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("getindex", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":28 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":28 * * cdef int getindex(self, int sym): * return -sym & INDEX_MASK # <<<<<<<<<<<<<< @@ -22485,7 +22480,7 @@ static int __pyx_f_3_sa_8Alphabet_getindex(CYTHON_UNUSED struct __pyx_obj_3_sa_A return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":30 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":30 * return -sym & INDEX_MASK * * cdef int setindex(self, int sym, int ind): # <<<<<<<<<<<<<< @@ -22498,7 +22493,7 @@ static int __pyx_f_3_sa_8Alphabet_setindex(CYTHON_UNUSED struct __pyx_obj_3_sa_A __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("setindex", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":31 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":31 * * cdef int setindex(self, int sym, int ind): * return -(-sym & ~INDEX_MASK | ind) # <<<<<<<<<<<<<< @@ -22514,7 +22509,7 @@ static int __pyx_f_3_sa_8Alphabet_setindex(CYTHON_UNUSED struct __pyx_obj_3_sa_A return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":33 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":33 * return -(-sym & ~INDEX_MASK | ind) * * cdef int clearindex(self, int sym): # <<<<<<<<<<<<<< @@ -22527,7 +22522,7 @@ static int __pyx_f_3_sa_8Alphabet_clearindex(CYTHON_UNUSED struct __pyx_obj_3_sa __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("clearindex", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":34 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":34 * * cdef int clearindex(self, int sym): * return -(-sym& ~INDEX_MASK) # <<<<<<<<<<<<<< @@ -22543,7 +22538,7 @@ static int __pyx_f_3_sa_8Alphabet_clearindex(CYTHON_UNUSED struct __pyx_obj_3_sa return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":36 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":36 * return -(-sym& ~INDEX_MASK) * * cdef int match(self, int sym1, int sym2): # <<<<<<<<<<<<<< @@ -22556,7 +22551,7 @@ static int __pyx_f_3_sa_8Alphabet_match(struct __pyx_obj_3_sa_Alphabet *__pyx_v_ __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("match", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":37 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":37 * * cdef int match(self, int sym1, int sym2): * return self.clearindex(sym1) == self.clearindex(sym2); # <<<<<<<<<<<<<< @@ -22572,7 +22567,7 @@ static int __pyx_f_3_sa_8Alphabet_match(struct __pyx_obj_3_sa_Alphabet *__pyx_v_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":39 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":39 * return self.clearindex(sym1) == self.clearindex(sym2); * * cdef char* tocat(self, int sym): # <<<<<<<<<<<<<< @@ -22585,7 +22580,7 @@ static char *__pyx_f_3_sa_8Alphabet_tocat(struct __pyx_obj_3_sa_Alphabet *__pyx_ __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("tocat", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":40 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":40 * * cdef char* tocat(self, int sym): * return self.nonterminals.word((-sym >> INDEX_SHIFT)-1) # <<<<<<<<<<<<<< @@ -22601,7 +22596,7 @@ static char *__pyx_f_3_sa_8Alphabet_tocat(struct __pyx_obj_3_sa_Alphabet *__pyx_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":42 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":42 * return self.nonterminals.word((-sym >> INDEX_SHIFT)-1) * * cdef int fromcat(self, char *s): # <<<<<<<<<<<<<< @@ -22616,7 +22611,7 @@ static int __pyx_f_3_sa_8Alphabet_fromcat(struct __pyx_obj_3_sa_Alphabet *__pyx_ int __pyx_t_1; __Pyx_RefNannySetupContext("fromcat", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":44 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":44 * cdef int fromcat(self, char *s): * cdef int i * i = self.nonterminals.index(s) # <<<<<<<<<<<<<< @@ -22625,7 +22620,7 @@ static int __pyx_f_3_sa_8Alphabet_fromcat(struct __pyx_obj_3_sa_Alphabet *__pyx_ */ __pyx_v_i = ((struct __pyx_vtabstruct_3_sa_StringMap *)__pyx_v_self->nonterminals->__pyx_vtab)->index(__pyx_v_self->nonterminals, __pyx_v_s); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":45 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":45 * cdef int i * i = self.nonterminals.index(s) * if self.first_nonterminal == -1: # <<<<<<<<<<<<<< @@ -22635,7 +22630,7 @@ static int __pyx_f_3_sa_8Alphabet_fromcat(struct __pyx_obj_3_sa_Alphabet *__pyx_ __pyx_t_1 = (__pyx_v_self->first_nonterminal == -1); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":46 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":46 * i = self.nonterminals.index(s) * if self.first_nonterminal == -1: * self.first_nonterminal = i # <<<<<<<<<<<<<< @@ -22647,7 +22642,7 @@ static int __pyx_f_3_sa_8Alphabet_fromcat(struct __pyx_obj_3_sa_Alphabet *__pyx_ } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":47 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":47 * if self.first_nonterminal == -1: * self.first_nonterminal = i * if i > self.last_nonterminal: # <<<<<<<<<<<<<< @@ -22657,7 +22652,7 @@ static int __pyx_f_3_sa_8Alphabet_fromcat(struct __pyx_obj_3_sa_Alphabet *__pyx_ __pyx_t_1 = (__pyx_v_i > __pyx_v_self->last_nonterminal); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":48 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":48 * self.first_nonterminal = i * if i > self.last_nonterminal: * self.last_nonterminal = i # <<<<<<<<<<<<<< @@ -22669,7 +22664,7 @@ static int __pyx_f_3_sa_8Alphabet_fromcat(struct __pyx_obj_3_sa_Alphabet *__pyx_ } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":49 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":49 * if i > self.last_nonterminal: * self.last_nonterminal = i * return -(i+1 << INDEX_SHIFT) # <<<<<<<<<<<<<< @@ -22685,7 +22680,7 @@ static int __pyx_f_3_sa_8Alphabet_fromcat(struct __pyx_obj_3_sa_Alphabet *__pyx_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":51 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":51 * return -(i+1 << INDEX_SHIFT) * * cdef char* tostring(self, int sym): # <<<<<<<<<<<<<< @@ -22708,7 +22703,7 @@ static char *__pyx_f_3_sa_8Alphabet_tostring(struct __pyx_obj_3_sa_Alphabet *__p int __pyx_clineno = 0; __Pyx_RefNannySetupContext("tostring", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":53 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":53 * cdef char* tostring(self, int sym): * cdef int ind * if self.isvar(sym): # <<<<<<<<<<<<<< @@ -22718,7 +22713,7 @@ static char *__pyx_f_3_sa_8Alphabet_tostring(struct __pyx_obj_3_sa_Alphabet *__p __pyx_t_1 = ((struct __pyx_vtabstruct_3_sa_Alphabet *)__pyx_v_self->__pyx_vtab)->isvar(__pyx_v_self, __pyx_v_sym); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":54 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":54 * cdef int ind * if self.isvar(sym): * if sym in self.id2sym: # <<<<<<<<<<<<<< @@ -22735,7 +22730,7 @@ static char *__pyx_f_3_sa_8Alphabet_tostring(struct __pyx_obj_3_sa_Alphabet *__p __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":55 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":55 * if self.isvar(sym): * if sym in self.id2sym: * return self.id2sym[sym] # <<<<<<<<<<<<<< @@ -22756,7 +22751,7 @@ static char *__pyx_f_3_sa_8Alphabet_tostring(struct __pyx_obj_3_sa_Alphabet *__p } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":56 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":56 * if sym in self.id2sym: * return self.id2sym[sym] * ind = self.getindex(sym) # <<<<<<<<<<<<<< @@ -22765,7 +22760,7 @@ static char *__pyx_f_3_sa_8Alphabet_tostring(struct __pyx_obj_3_sa_Alphabet *__p */ __pyx_v_ind = ((struct __pyx_vtabstruct_3_sa_Alphabet *)__pyx_v_self->__pyx_vtab)->getindex(__pyx_v_self, __pyx_v_sym); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":57 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":57 * return self.id2sym[sym] * ind = self.getindex(sym) * if ind > 0: # <<<<<<<<<<<<<< @@ -22775,7 +22770,7 @@ static char *__pyx_f_3_sa_8Alphabet_tostring(struct __pyx_obj_3_sa_Alphabet *__p __pyx_t_3 = (__pyx_v_ind > 0); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":58 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":58 * ind = self.getindex(sym) * if ind > 0: * self.id2sym[sym] = "[%s,%d]" % (self.tocat(sym), ind) # <<<<<<<<<<<<<< @@ -22807,7 +22802,7 @@ static char *__pyx_f_3_sa_8Alphabet_tostring(struct __pyx_obj_3_sa_Alphabet *__p } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":60 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":60 * self.id2sym[sym] = "[%s,%d]" % (self.tocat(sym), ind) * else: * self.id2sym[sym] = "[%s]" % self.tocat(sym) # <<<<<<<<<<<<<< @@ -22828,7 +22823,7 @@ static char *__pyx_f_3_sa_8Alphabet_tostring(struct __pyx_obj_3_sa_Alphabet *__p } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":61 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":61 * else: * self.id2sym[sym] = "[%s]" % self.tocat(sym) * return self.id2sym[sym] # <<<<<<<<<<<<<< @@ -22849,7 +22844,7 @@ static char *__pyx_f_3_sa_8Alphabet_tostring(struct __pyx_obj_3_sa_Alphabet *__p } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":63 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":63 * return self.id2sym[sym] * else: * return self.terminals.word(sym) # <<<<<<<<<<<<<< @@ -22874,7 +22869,7 @@ static char *__pyx_f_3_sa_8Alphabet_tostring(struct __pyx_obj_3_sa_Alphabet *__p return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":65 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":65 * return self.terminals.word(sym) * * cdef int fromstring(self, char *s, bint terminal): # <<<<<<<<<<<<<< @@ -22902,7 +22897,7 @@ static int __pyx_f_3_sa_8Alphabet_fromstring(struct __pyx_obj_3_sa_Alphabet *__p int __pyx_clineno = 0; __Pyx_RefNannySetupContext("fromstring", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":69 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":69 * cdef char *comma * cdef int n * n = strlen(s) # <<<<<<<<<<<<<< @@ -22911,7 +22906,7 @@ static int __pyx_f_3_sa_8Alphabet_fromstring(struct __pyx_obj_3_sa_Alphabet *__p */ __pyx_v_n = strlen(__pyx_v_s); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":71 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":71 * n = strlen(s) * cdef char *sep * sep = strstr(s,"_SEP_") # <<<<<<<<<<<<<< @@ -22920,7 +22915,7 @@ static int __pyx_f_3_sa_8Alphabet_fromstring(struct __pyx_obj_3_sa_Alphabet *__p */ __pyx_v_sep = strstr(__pyx_v_s, __pyx_k___SEP_); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":72 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":72 * cdef char *sep * sep = strstr(s,"_SEP_") * if n >= 3 and s[0] == c'[' and s[n-1] == c']' and sep == NULL: # <<<<<<<<<<<<<< @@ -22948,7 +22943,7 @@ static int __pyx_f_3_sa_8Alphabet_fromstring(struct __pyx_obj_3_sa_Alphabet *__p } if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":73 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":73 * sep = strstr(s,"_SEP_") * if n >= 3 and s[0] == c'[' and s[n-1] == c']' and sep == NULL: * if terminal: # <<<<<<<<<<<<<< @@ -22957,7 +22952,7 @@ static int __pyx_f_3_sa_8Alphabet_fromstring(struct __pyx_obj_3_sa_Alphabet *__p */ if (__pyx_v_terminal) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":74 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":74 * if n >= 3 and s[0] == c'[' and s[n-1] == c']' and sep == NULL: * if terminal: * s1 = "\\"+s # <<<<<<<<<<<<<< @@ -22972,7 +22967,7 @@ static int __pyx_f_3_sa_8Alphabet_fromstring(struct __pyx_obj_3_sa_Alphabet *__p __pyx_v_s1 = __pyx_t_7; __pyx_t_7 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":75 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":75 * if terminal: * s1 = "\\"+s * return self.terminals.index(s1) # <<<<<<<<<<<<<< @@ -22986,7 +22981,7 @@ static int __pyx_f_3_sa_8Alphabet_fromstring(struct __pyx_obj_3_sa_Alphabet *__p } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":76 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":76 * s1 = "\\"+s * return self.terminals.index(s1) * s[n-1] = c'\0' # <<<<<<<<<<<<<< @@ -22995,7 +22990,7 @@ static int __pyx_f_3_sa_8Alphabet_fromstring(struct __pyx_obj_3_sa_Alphabet *__p */ (__pyx_v_s[(__pyx_v_n - 1)]) = '\x00'; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":77 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":77 * return self.terminals.index(s1) * s[n-1] = c'\0' * s = s + 1 # <<<<<<<<<<<<<< @@ -23004,7 +22999,7 @@ static int __pyx_f_3_sa_8Alphabet_fromstring(struct __pyx_obj_3_sa_Alphabet *__p */ __pyx_v_s = (__pyx_v_s + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":78 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":78 * s[n-1] = c'\0' * s = s + 1 * comma = strrchr(s, c',') # <<<<<<<<<<<<<< @@ -23013,7 +23008,7 @@ static int __pyx_f_3_sa_8Alphabet_fromstring(struct __pyx_obj_3_sa_Alphabet *__p */ __pyx_v_comma = strrchr(__pyx_v_s, ','); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":79 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":79 * s = s + 1 * comma = strrchr(s, c',') * if comma != NULL: # <<<<<<<<<<<<<< @@ -23023,7 +23018,7 @@ static int __pyx_f_3_sa_8Alphabet_fromstring(struct __pyx_obj_3_sa_Alphabet *__p __pyx_t_2 = (__pyx_v_comma != NULL); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":80 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":80 * comma = strrchr(s, c',') * if comma != NULL: * comma[0] = c'\0' # <<<<<<<<<<<<<< @@ -23032,7 +23027,7 @@ static int __pyx_f_3_sa_8Alphabet_fromstring(struct __pyx_obj_3_sa_Alphabet *__p */ (__pyx_v_comma[0]) = '\x00'; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":81 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":81 * if comma != NULL: * comma[0] = c'\0' * return self.setindex(self.fromcat(s), strtol(comma+1, NULL, 10)) # <<<<<<<<<<<<<< @@ -23045,7 +23040,7 @@ static int __pyx_f_3_sa_8Alphabet_fromstring(struct __pyx_obj_3_sa_Alphabet *__p } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":83 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":83 * return self.setindex(self.fromcat(s), strtol(comma+1, NULL, 10)) * else: * return self.fromcat(s) # <<<<<<<<<<<<<< @@ -23060,7 +23055,7 @@ static int __pyx_f_3_sa_8Alphabet_fromstring(struct __pyx_obj_3_sa_Alphabet *__p } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":85 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":85 * return self.fromcat(s) * else: * return self.terminals.index(s) # <<<<<<<<<<<<<< @@ -23096,7 +23091,7 @@ static PyObject *__pyx_pw_3_sa_8Alphabet_9terminals_1__get__(PyObject *__pyx_v_s return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":8 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":8 * * cdef class Alphabet: * cdef readonly StringMap terminals, nonterminals # <<<<<<<<<<<<<< @@ -23147,7 +23142,7 @@ static PyObject *__pyx_pf_3_sa_8Alphabet_12nonterminals___get__(struct __pyx_obj return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":89 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":89 * cdef Alphabet ALPHABET = Alphabet() * * cdef char* sym_tostring(int sym): # <<<<<<<<<<<<<< @@ -23160,7 +23155,7 @@ static char *__pyx_f_3_sa_sym_tostring(int __pyx_v_sym) { __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("sym_tostring", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":90 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":90 * * cdef char* sym_tostring(int sym): * return ALPHABET.tostring(sym) # <<<<<<<<<<<<<< @@ -23176,7 +23171,7 @@ static char *__pyx_f_3_sa_sym_tostring(int __pyx_v_sym) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":92 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":92 * return ALPHABET.tostring(sym) * * cdef char* sym_tocat(int sym): # <<<<<<<<<<<<<< @@ -23189,7 +23184,7 @@ static char *__pyx_f_3_sa_sym_tocat(int __pyx_v_sym) { __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("sym_tocat", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":93 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":93 * * cdef char* sym_tocat(int sym): * return ALPHABET.tocat(sym) # <<<<<<<<<<<<<< @@ -23205,7 +23200,7 @@ static char *__pyx_f_3_sa_sym_tocat(int __pyx_v_sym) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":95 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":95 * return ALPHABET.tocat(sym) * * cdef int sym_isvar(int sym): # <<<<<<<<<<<<<< @@ -23218,7 +23213,7 @@ static int __pyx_f_3_sa_sym_isvar(int __pyx_v_sym) { __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("sym_isvar", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":96 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":96 * * cdef int sym_isvar(int sym): * return ALPHABET.isvar(sym) # <<<<<<<<<<<<<< @@ -23234,7 +23229,7 @@ static int __pyx_f_3_sa_sym_isvar(int __pyx_v_sym) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":98 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":98 * return ALPHABET.isvar(sym) * * cdef int sym_getindex(int sym): # <<<<<<<<<<<<<< @@ -23247,7 +23242,7 @@ static int __pyx_f_3_sa_sym_getindex(int __pyx_v_sym) { __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("sym_getindex", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":99 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":99 * * cdef int sym_getindex(int sym): * return ALPHABET.getindex(sym) # <<<<<<<<<<<<<< @@ -23263,7 +23258,7 @@ static int __pyx_f_3_sa_sym_getindex(int __pyx_v_sym) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":101 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":101 * return ALPHABET.getindex(sym) * * cdef int sym_setindex(int sym, int id): # <<<<<<<<<<<<<< @@ -23276,7 +23271,7 @@ static int __pyx_f_3_sa_sym_setindex(int __pyx_v_sym, int __pyx_v_id) { __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("sym_setindex", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":102 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":102 * * cdef int sym_setindex(int sym, int id): * return ALPHABET.setindex(sym, id) # <<<<<<<<<<<<<< @@ -23292,7 +23287,7 @@ static int __pyx_f_3_sa_sym_setindex(int __pyx_v_sym, int __pyx_v_id) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":104 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":104 * return ALPHABET.setindex(sym, id) * * cdef int sym_fromstring(char* string, bint terminal): # <<<<<<<<<<<<<< @@ -23305,7 +23300,7 @@ static int __pyx_f_3_sa_sym_fromstring(char *__pyx_v_string, int __pyx_v_termina __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("sym_fromstring", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":105 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":105 * * cdef int sym_fromstring(char* string, bint terminal): * return ALPHABET.fromstring(string, terminal) # <<<<<<<<<<<<<< @@ -23334,7 +23329,7 @@ static PyObject *__pyx_pw_3_sa_3make_lattice(PyObject *__pyx_self, PyObject *__p } static PyObject *__pyx_gb_3_sa_12make_lattice_2generator7(__pyx_GeneratorObject *__pyx_generator, PyObject *__pyx_sent_value); /* proto */ -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":108 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":108 * * def make_lattice(words): * word_ids = (sym_fromstring(word, True) for word in words) # <<<<<<<<<<<<<< @@ -23476,7 +23471,7 @@ static PyObject *__pyx_gb_3_sa_12make_lattice_2generator7(__pyx_GeneratorObject } static PyObject *__pyx_gb_3_sa_12make_lattice_5generator8(__pyx_GeneratorObject *__pyx_generator, PyObject *__pyx_sent_value); /* proto */ -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":109 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":109 * def make_lattice(words): * word_ids = (sym_fromstring(word, True) for word in words) * return tuple(((word, None, 1), ) for word in word_ids) # <<<<<<<<<<<<<< @@ -23631,7 +23626,7 @@ static PyObject *__pyx_gb_3_sa_12make_lattice_5generator8(__pyx_GeneratorObject return NULL; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":107 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":107 * return ALPHABET.fromstring(string, terminal) * * def make_lattice(words): # <<<<<<<<<<<<<< @@ -23659,7 +23654,7 @@ static PyObject *__pyx_pf_3_sa_2make_lattice(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_INCREF(__pyx_cur_scope->__pyx_v_words); __Pyx_GIVEREF(__pyx_cur_scope->__pyx_v_words); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":108 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":108 * * def make_lattice(words): * word_ids = (sym_fromstring(word, True) for word in words) # <<<<<<<<<<<<<< @@ -23672,7 +23667,7 @@ static PyObject *__pyx_pf_3_sa_2make_lattice(CYTHON_UNUSED PyObject *__pyx_self, __pyx_cur_scope->__pyx_v_word_ids = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":109 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":109 * def make_lattice(words): * word_ids = (sym_fromstring(word, True) for word in words) * return tuple(((word, None, 1), ) for word in word_ids) # <<<<<<<<<<<<<< @@ -23721,7 +23716,7 @@ static PyObject *__pyx_pw_3_sa_5decode_lattice(PyObject *__pyx_self, PyObject *_ } static PyObject *__pyx_gb_3_sa_14decode_lattice_2generator9(__pyx_GeneratorObject *__pyx_generator, PyObject *__pyx_sent_value); /* proto */ -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":112 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":112 * * def decode_lattice(lattice): * return tuple((sym_tostring(sym), weight, dist) for (sym, weight, dist) in arc # <<<<<<<<<<<<<< @@ -23795,7 +23790,7 @@ static PyObject *__pyx_gb_3_sa_14decode_lattice_2generator9(__pyx_GeneratorObjec __pyx_L3_first_run:; if (unlikely(!__pyx_sent_value)) {__pyx_filename = __pyx_f[10]; __pyx_lineno = 112; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":113 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":113 * def decode_lattice(lattice): * return tuple((sym_tostring(sym), weight, dist) for (sym, weight, dist) in arc * for arc in node for node in lattice) # <<<<<<<<<<<<<< @@ -23813,7 +23808,7 @@ static PyObject *__pyx_gb_3_sa_14decode_lattice_2generator9(__pyx_GeneratorObjec } for (;;) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":112 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":112 * * def decode_lattice(lattice): * return tuple((sym_tostring(sym), weight, dist) for (sym, weight, dist) in arc # <<<<<<<<<<<<<< @@ -23916,7 +23911,7 @@ static PyObject *__pyx_gb_3_sa_14decode_lattice_2generator9(__pyx_GeneratorObjec __pyx_cur_scope->__pyx_v_dist = __pyx_t_7; __pyx_t_7 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":113 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":113 * def decode_lattice(lattice): * return tuple((sym_tostring(sym), weight, dist) for (sym, weight, dist) in arc * for arc in node for node in lattice) # <<<<<<<<<<<<<< @@ -24004,7 +23999,7 @@ static PyObject *__pyx_gb_3_sa_14decode_lattice_2generator9(__pyx_GeneratorObjec __pyx_cur_scope->__pyx_v_node = __pyx_t_6; __pyx_t_6 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":112 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":112 * * def decode_lattice(lattice): * return tuple((sym_tostring(sym), weight, dist) for (sym, weight, dist) in arc # <<<<<<<<<<<<<< @@ -24085,7 +24080,7 @@ static PyObject *__pyx_gb_3_sa_14decode_lattice_2generator9(__pyx_GeneratorObjec return NULL; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":111 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":111 * return tuple(((word, None, 1), ) for word in word_ids) * * def decode_lattice(lattice): # <<<<<<<<<<<<<< @@ -24113,7 +24108,7 @@ static PyObject *__pyx_pf_3_sa_4decode_lattice(CYTHON_UNUSED PyObject *__pyx_sel __Pyx_INCREF(__pyx_cur_scope->__pyx_v_lattice); __Pyx_GIVEREF(__pyx_cur_scope->__pyx_v_lattice); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":112 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":112 * * def decode_lattice(lattice): * return tuple((sym_tostring(sym), weight, dist) for (sym, weight, dist) in arc # <<<<<<<<<<<<<< @@ -24162,7 +24157,7 @@ static PyObject *__pyx_pw_3_sa_7decode_sentence(PyObject *__pyx_self, PyObject * } static PyObject *__pyx_gb_3_sa_15decode_sentence_2generator10(__pyx_GeneratorObject *__pyx_generator, PyObject *__pyx_sent_value); /* proto */ -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":116 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":116 * * def decode_sentence(lattice): * return tuple(sym_tostring(sym) for ((sym, _, _),) in lattice) # <<<<<<<<<<<<<< @@ -24420,7 +24415,7 @@ static PyObject *__pyx_gb_3_sa_15decode_sentence_2generator10(__pyx_GeneratorObj return NULL; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":115 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":115 * for arc in node for node in lattice) * * def decode_sentence(lattice): # <<<<<<<<<<<<<< @@ -24447,7 +24442,7 @@ static PyObject *__pyx_pf_3_sa_6decode_sentence(CYTHON_UNUSED PyObject *__pyx_se __Pyx_INCREF(__pyx_cur_scope->__pyx_v_lattice); __Pyx_GIVEREF(__pyx_cur_scope->__pyx_v_lattice); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":116 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":116 * * def decode_sentence(lattice): * return tuple(sym_tostring(sym) for ((sym, _, _),) in lattice) # <<<<<<<<<<<<<< @@ -24528,7 +24523,7 @@ static int __pyx_pw_3_sa_6Phrase_1__cinit__(PyObject *__pyx_v_self, PyObject *__ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":6 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":6 * cdef class Phrase: * * def __cinit__(self, words): # <<<<<<<<<<<<<< @@ -24552,7 +24547,7 @@ static int __pyx_pf_3_sa_6Phrase___cinit__(struct __pyx_obj_3_sa_Phrase *__pyx_v int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":8 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":8 * def __cinit__(self, words): * cdef int i, j, n, n_vars * n_vars = 0 # <<<<<<<<<<<<<< @@ -24561,7 +24556,7 @@ static int __pyx_pf_3_sa_6Phrase___cinit__(struct __pyx_obj_3_sa_Phrase *__pyx_v */ __pyx_v_n_vars = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":9 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":9 * cdef int i, j, n, n_vars * n_vars = 0 * n = len(words) # <<<<<<<<<<<<<< @@ -24571,7 +24566,7 @@ static int __pyx_pf_3_sa_6Phrase___cinit__(struct __pyx_obj_3_sa_Phrase *__pyx_v __pyx_t_1 = PyObject_Length(__pyx_v_words); if (unlikely(__pyx_t_1 == -1)) {__pyx_filename = __pyx_f[7]; __pyx_lineno = 9; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_n = __pyx_t_1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":10 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":10 * n_vars = 0 * n = len(words) * self.syms = <int *>malloc(n*sizeof(int)) # <<<<<<<<<<<<<< @@ -24580,7 +24575,7 @@ static int __pyx_pf_3_sa_6Phrase___cinit__(struct __pyx_obj_3_sa_Phrase *__pyx_v */ __pyx_v_self->syms = ((int *)malloc((__pyx_v_n * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":11 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":11 * n = len(words) * self.syms = <int *>malloc(n*sizeof(int)) * for i from 0 <= i < n: # <<<<<<<<<<<<<< @@ -24590,7 +24585,7 @@ static int __pyx_pf_3_sa_6Phrase___cinit__(struct __pyx_obj_3_sa_Phrase *__pyx_v __pyx_t_2 = __pyx_v_n; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_2; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":12 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":12 * self.syms = <int *>malloc(n*sizeof(int)) * for i from 0 <= i < n: * self.syms[i] = words[i] # <<<<<<<<<<<<<< @@ -24603,7 +24598,7 @@ static int __pyx_pf_3_sa_6Phrase___cinit__(struct __pyx_obj_3_sa_Phrase *__pyx_v __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; (__pyx_v_self->syms[__pyx_v_i]) = __pyx_t_4; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":13 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":13 * for i from 0 <= i < n: * self.syms[i] = words[i] * if sym_isvar(self.syms[i]): # <<<<<<<<<<<<<< @@ -24613,7 +24608,7 @@ static int __pyx_pf_3_sa_6Phrase___cinit__(struct __pyx_obj_3_sa_Phrase *__pyx_v __pyx_t_4 = __pyx_f_3_sa_sym_isvar((__pyx_v_self->syms[__pyx_v_i])); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":14 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":14 * self.syms[i] = words[i] * if sym_isvar(self.syms[i]): * n_vars += 1 # <<<<<<<<<<<<<< @@ -24626,7 +24621,7 @@ static int __pyx_pf_3_sa_6Phrase___cinit__(struct __pyx_obj_3_sa_Phrase *__pyx_v __pyx_L5:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":15 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":15 * if sym_isvar(self.syms[i]): * n_vars += 1 * self.n = n # <<<<<<<<<<<<<< @@ -24635,7 +24630,7 @@ static int __pyx_pf_3_sa_6Phrase___cinit__(struct __pyx_obj_3_sa_Phrase *__pyx_v */ __pyx_v_self->n = __pyx_v_n; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":16 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":16 * n_vars += 1 * self.n = n * self.n_vars = n_vars # <<<<<<<<<<<<<< @@ -24644,7 +24639,7 @@ static int __pyx_pf_3_sa_6Phrase___cinit__(struct __pyx_obj_3_sa_Phrase *__pyx_v */ __pyx_v_self->n_vars = __pyx_v_n_vars; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":17 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":17 * self.n = n * self.n_vars = n_vars * self.varpos = <int *>malloc(n_vars*sizeof(int)) # <<<<<<<<<<<<<< @@ -24653,7 +24648,7 @@ static int __pyx_pf_3_sa_6Phrase___cinit__(struct __pyx_obj_3_sa_Phrase *__pyx_v */ __pyx_v_self->varpos = ((int *)malloc((__pyx_v_n_vars * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":18 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":18 * self.n_vars = n_vars * self.varpos = <int *>malloc(n_vars*sizeof(int)) * j = 0 # <<<<<<<<<<<<<< @@ -24662,7 +24657,7 @@ static int __pyx_pf_3_sa_6Phrase___cinit__(struct __pyx_obj_3_sa_Phrase *__pyx_v */ __pyx_v_j = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":19 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":19 * self.varpos = <int *>malloc(n_vars*sizeof(int)) * j = 0 * for i from 0 <= i < n: # <<<<<<<<<<<<<< @@ -24672,7 +24667,7 @@ static int __pyx_pf_3_sa_6Phrase___cinit__(struct __pyx_obj_3_sa_Phrase *__pyx_v __pyx_t_2 = __pyx_v_n; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_2; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":20 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":20 * j = 0 * for i from 0 <= i < n: * if sym_isvar(self.syms[i]): # <<<<<<<<<<<<<< @@ -24682,7 +24677,7 @@ static int __pyx_pf_3_sa_6Phrase___cinit__(struct __pyx_obj_3_sa_Phrase *__pyx_v __pyx_t_4 = __pyx_f_3_sa_sym_isvar((__pyx_v_self->syms[__pyx_v_i])); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":21 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":21 * for i from 0 <= i < n: * if sym_isvar(self.syms[i]): * self.varpos[j] = i # <<<<<<<<<<<<<< @@ -24691,7 +24686,7 @@ static int __pyx_pf_3_sa_6Phrase___cinit__(struct __pyx_obj_3_sa_Phrase *__pyx_v */ (__pyx_v_self->varpos[__pyx_v_j]) = __pyx_v_i; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":22 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":22 * if sym_isvar(self.syms[i]): * self.varpos[j] = i * j = j + 1 # <<<<<<<<<<<<<< @@ -24724,7 +24719,7 @@ static void __pyx_pw_3_sa_6Phrase_3__dealloc__(PyObject *__pyx_v_self) { __Pyx_RefNannyFinishContext(); } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":24 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":24 * j = j + 1 * * def __dealloc__(self): # <<<<<<<<<<<<<< @@ -24736,7 +24731,7 @@ static void __pyx_pf_3_sa_6Phrase_2__dealloc__(struct __pyx_obj_3_sa_Phrase *__p __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("__dealloc__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":25 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":25 * * def __dealloc__(self): * free(self.syms) # <<<<<<<<<<<<<< @@ -24745,7 +24740,7 @@ static void __pyx_pf_3_sa_6Phrase_2__dealloc__(struct __pyx_obj_3_sa_Phrase *__p */ free(__pyx_v_self->syms); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":26 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":26 * def __dealloc__(self): * free(self.syms) * free(self.varpos) # <<<<<<<<<<<<<< @@ -24768,7 +24763,7 @@ static PyObject *__pyx_pw_3_sa_6Phrase_5__str__(PyObject *__pyx_v_self) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":28 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":28 * free(self.varpos) * * def __str__(self): # <<<<<<<<<<<<<< @@ -24792,7 +24787,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_4__str__(struct __pyx_obj_3_sa_Phrase *__ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__str__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":29 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":29 * * def __str__(self): * strs = [] # <<<<<<<<<<<<<< @@ -24804,7 +24799,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_4__str__(struct __pyx_obj_3_sa_Phrase *__ __pyx_v_strs = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":31 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":31 * strs = [] * cdef int i, s * for i from 0 <= i < self.n: # <<<<<<<<<<<<<< @@ -24814,7 +24809,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_4__str__(struct __pyx_obj_3_sa_Phrase *__ __pyx_t_2 = __pyx_v_self->n; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_2; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":32 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":32 * cdef int i, s * for i from 0 <= i < self.n: * s = self.syms[i] # <<<<<<<<<<<<<< @@ -24823,7 +24818,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_4__str__(struct __pyx_obj_3_sa_Phrase *__ */ __pyx_v_s = (__pyx_v_self->syms[__pyx_v_i]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":33 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":33 * for i from 0 <= i < self.n: * s = self.syms[i] * strs.append(sym_tostring(s)) # <<<<<<<<<<<<<< @@ -24836,7 +24831,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_4__str__(struct __pyx_obj_3_sa_Phrase *__ __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":34 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":34 * s = self.syms[i] * strs.append(sym_tostring(s)) * return ' '.join(strs) # <<<<<<<<<<<<<< @@ -24886,7 +24881,7 @@ static PyObject *__pyx_pw_3_sa_6Phrase_7handle(PyObject *__pyx_v_self, CYTHON_UN return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":36 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":36 * return ' '.join(strs) * * def handle(self): # <<<<<<<<<<<<<< @@ -24910,7 +24905,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_6handle(struct __pyx_obj_3_sa_Phrase *__p int __pyx_clineno = 0; __Pyx_RefNannySetupContext("handle", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":39 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":39 * """return a hashable representation that normalizes the ordering * of the nonterminal indices""" * norm = [] # <<<<<<<<<<<<<< @@ -24922,7 +24917,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_6handle(struct __pyx_obj_3_sa_Phrase *__p __pyx_v_norm = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":41 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":41 * norm = [] * cdef int i, j, s * i = 1 # <<<<<<<<<<<<<< @@ -24931,7 +24926,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_6handle(struct __pyx_obj_3_sa_Phrase *__p */ __pyx_v_i = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":42 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":42 * cdef int i, j, s * i = 1 * j = 0 # <<<<<<<<<<<<<< @@ -24940,7 +24935,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_6handle(struct __pyx_obj_3_sa_Phrase *__p */ __pyx_v_j = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":43 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":43 * i = 1 * j = 0 * for j from 0 <= j < self.n: # <<<<<<<<<<<<<< @@ -24950,7 +24945,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_6handle(struct __pyx_obj_3_sa_Phrase *__p __pyx_t_2 = __pyx_v_self->n; for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_2; __pyx_v_j++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":44 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":44 * j = 0 * for j from 0 <= j < self.n: * s = self.syms[j] # <<<<<<<<<<<<<< @@ -24959,7 +24954,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_6handle(struct __pyx_obj_3_sa_Phrase *__p */ __pyx_v_s = (__pyx_v_self->syms[__pyx_v_j]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":45 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":45 * for j from 0 <= j < self.n: * s = self.syms[j] * if sym_isvar(s): # <<<<<<<<<<<<<< @@ -24969,7 +24964,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_6handle(struct __pyx_obj_3_sa_Phrase *__p __pyx_t_3 = __pyx_f_3_sa_sym_isvar(__pyx_v_s); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":46 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":46 * s = self.syms[j] * if sym_isvar(s): * s = sym_setindex(s,i) # <<<<<<<<<<<<<< @@ -24978,7 +24973,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_6handle(struct __pyx_obj_3_sa_Phrase *__p */ __pyx_v_s = __pyx_f_3_sa_sym_setindex(__pyx_v_s, __pyx_v_i); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":47 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":47 * if sym_isvar(s): * s = sym_setindex(s,i) * i = i + 1 # <<<<<<<<<<<<<< @@ -24990,7 +24985,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_6handle(struct __pyx_obj_3_sa_Phrase *__p } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":48 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":48 * s = sym_setindex(s,i) * i = i + 1 * norm.append(s) # <<<<<<<<<<<<<< @@ -25003,7 +24998,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_6handle(struct __pyx_obj_3_sa_Phrase *__p __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":49 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":49 * i = i + 1 * norm.append(s) * return tuple(norm) # <<<<<<<<<<<<<< @@ -25041,7 +25036,7 @@ static PyObject *__pyx_pw_3_sa_6Phrase_9strhandle(PyObject *__pyx_v_self, CYTHON return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":51 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":51 * return tuple(norm) * * def strhandle(self): # <<<<<<<<<<<<<< @@ -25068,7 +25063,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_8strhandle(struct __pyx_obj_3_sa_Phrase * int __pyx_clineno = 0; __Pyx_RefNannySetupContext("strhandle", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":52 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":52 * * def strhandle(self): * strs = [] # <<<<<<<<<<<<<< @@ -25080,7 +25075,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_8strhandle(struct __pyx_obj_3_sa_Phrase * __pyx_v_strs = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":53 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":53 * def strhandle(self): * strs = [] * norm = [] # <<<<<<<<<<<<<< @@ -25092,7 +25087,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_8strhandle(struct __pyx_obj_3_sa_Phrase * __pyx_v_norm = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":55 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":55 * norm = [] * cdef int i, j, s * i = 1 # <<<<<<<<<<<<<< @@ -25101,7 +25096,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_8strhandle(struct __pyx_obj_3_sa_Phrase * */ __pyx_v_i = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":56 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":56 * cdef int i, j, s * i = 1 * j = 0 # <<<<<<<<<<<<<< @@ -25110,7 +25105,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_8strhandle(struct __pyx_obj_3_sa_Phrase * */ __pyx_v_j = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":57 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":57 * i = 1 * j = 0 * for j from 0 <= j < self.n: # <<<<<<<<<<<<<< @@ -25120,7 +25115,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_8strhandle(struct __pyx_obj_3_sa_Phrase * __pyx_t_2 = __pyx_v_self->n; for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_2; __pyx_v_j++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":58 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":58 * j = 0 * for j from 0 <= j < self.n: * s = self.syms[j] # <<<<<<<<<<<<<< @@ -25129,7 +25124,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_8strhandle(struct __pyx_obj_3_sa_Phrase * */ __pyx_v_s = (__pyx_v_self->syms[__pyx_v_j]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":59 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":59 * for j from 0 <= j < self.n: * s = self.syms[j] * if sym_isvar(s): # <<<<<<<<<<<<<< @@ -25139,7 +25134,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_8strhandle(struct __pyx_obj_3_sa_Phrase * __pyx_t_3 = __pyx_f_3_sa_sym_isvar(__pyx_v_s); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":60 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":60 * s = self.syms[j] * if sym_isvar(s): * s = sym_setindex(s,i) # <<<<<<<<<<<<<< @@ -25148,7 +25143,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_8strhandle(struct __pyx_obj_3_sa_Phrase * */ __pyx_v_s = __pyx_f_3_sa_sym_setindex(__pyx_v_s, __pyx_v_i); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":61 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":61 * if sym_isvar(s): * s = sym_setindex(s,i) * i = i + 1 # <<<<<<<<<<<<<< @@ -25160,7 +25155,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_8strhandle(struct __pyx_obj_3_sa_Phrase * } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":62 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":62 * s = sym_setindex(s,i) * i = i + 1 * norm.append(sym_tostring(s)) # <<<<<<<<<<<<<< @@ -25173,7 +25168,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_8strhandle(struct __pyx_obj_3_sa_Phrase * __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":63 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":63 * i = i + 1 * norm.append(sym_tostring(s)) * return ' '.join(norm) # <<<<<<<<<<<<<< @@ -25223,7 +25218,7 @@ static PyObject *__pyx_pw_3_sa_6Phrase_11arity(PyObject *__pyx_v_self, CYTHON_UN return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":65 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":65 * return ' '.join(norm) * * def arity(self): # <<<<<<<<<<<<<< @@ -25240,7 +25235,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_10arity(struct __pyx_obj_3_sa_Phrase *__p int __pyx_clineno = 0; __Pyx_RefNannySetupContext("arity", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":66 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":66 * * def arity(self): * return self.n_vars # <<<<<<<<<<<<<< @@ -25277,7 +25272,7 @@ static PyObject *__pyx_pw_3_sa_6Phrase_13getvarpos(PyObject *__pyx_v_self, PyObj return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":68 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":68 * return self.n_vars * * def getvarpos(self, i): # <<<<<<<<<<<<<< @@ -25297,7 +25292,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_12getvarpos(struct __pyx_obj_3_sa_Phrase int __pyx_clineno = 0; __Pyx_RefNannySetupContext("getvarpos", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":69 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":69 * * def getvarpos(self, i): * if 0 <= i < self.n_vars: # <<<<<<<<<<<<<< @@ -25316,7 +25311,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_12getvarpos(struct __pyx_obj_3_sa_Phrase __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":70 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":70 * def getvarpos(self, i): * if 0 <= i < self.n_vars: * return self.varpos[i] # <<<<<<<<<<<<<< @@ -25334,7 +25329,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_12getvarpos(struct __pyx_obj_3_sa_Phrase } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":72 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":72 * return self.varpos[i] * else: * raise IndexError # <<<<<<<<<<<<<< @@ -25370,7 +25365,7 @@ static PyObject *__pyx_pw_3_sa_6Phrase_15getvar(PyObject *__pyx_v_self, PyObject return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":74 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":74 * raise IndexError * * def getvar(self, i): # <<<<<<<<<<<<<< @@ -25390,7 +25385,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_14getvar(struct __pyx_obj_3_sa_Phrase *__ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("getvar", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":75 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":75 * * def getvar(self, i): * if 0 <= i < self.n_vars: # <<<<<<<<<<<<<< @@ -25409,7 +25404,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_14getvar(struct __pyx_obj_3_sa_Phrase *__ __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":76 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":76 * def getvar(self, i): * if 0 <= i < self.n_vars: * return self.syms[self.varpos[i]] # <<<<<<<<<<<<<< @@ -25427,7 +25422,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_14getvar(struct __pyx_obj_3_sa_Phrase *__ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":78 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":78 * return self.syms[self.varpos[i]] * else: * raise IndexError # <<<<<<<<<<<<<< @@ -25452,7 +25447,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_14getvar(struct __pyx_obj_3_sa_Phrase *__ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":80 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":80 * raise IndexError * * cdef int chunkpos(self, int k): # <<<<<<<<<<<<<< @@ -25466,7 +25461,7 @@ int __pyx_f_3_sa_6Phrase_chunkpos(struct __pyx_obj_3_sa_Phrase *__pyx_v_self, in int __pyx_t_1; __Pyx_RefNannySetupContext("chunkpos", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":81 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":81 * * cdef int chunkpos(self, int k): * if k == 0: # <<<<<<<<<<<<<< @@ -25476,7 +25471,7 @@ int __pyx_f_3_sa_6Phrase_chunkpos(struct __pyx_obj_3_sa_Phrase *__pyx_v_self, in __pyx_t_1 = (__pyx_v_k == 0); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":82 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":82 * cdef int chunkpos(self, int k): * if k == 0: * return 0 # <<<<<<<<<<<<<< @@ -25489,7 +25484,7 @@ int __pyx_f_3_sa_6Phrase_chunkpos(struct __pyx_obj_3_sa_Phrase *__pyx_v_self, in } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":84 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":84 * return 0 * else: * return self.varpos[k-1]+1 # <<<<<<<<<<<<<< @@ -25507,7 +25502,7 @@ int __pyx_f_3_sa_6Phrase_chunkpos(struct __pyx_obj_3_sa_Phrase *__pyx_v_self, in return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":86 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":86 * return self.varpos[k-1]+1 * * cdef int chunklen(self, int k): # <<<<<<<<<<<<<< @@ -25521,7 +25516,7 @@ int __pyx_f_3_sa_6Phrase_chunklen(struct __pyx_obj_3_sa_Phrase *__pyx_v_self, in int __pyx_t_1; __Pyx_RefNannySetupContext("chunklen", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":87 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":87 * * cdef int chunklen(self, int k): * if self.n_vars == 0: # <<<<<<<<<<<<<< @@ -25531,7 +25526,7 @@ int __pyx_f_3_sa_6Phrase_chunklen(struct __pyx_obj_3_sa_Phrase *__pyx_v_self, in __pyx_t_1 = (__pyx_v_self->n_vars == 0); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":88 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":88 * cdef int chunklen(self, int k): * if self.n_vars == 0: * return self.n # <<<<<<<<<<<<<< @@ -25543,7 +25538,7 @@ int __pyx_f_3_sa_6Phrase_chunklen(struct __pyx_obj_3_sa_Phrase *__pyx_v_self, in goto __pyx_L3; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":89 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":89 * if self.n_vars == 0: * return self.n * elif k == 0: # <<<<<<<<<<<<<< @@ -25553,7 +25548,7 @@ int __pyx_f_3_sa_6Phrase_chunklen(struct __pyx_obj_3_sa_Phrase *__pyx_v_self, in __pyx_t_1 = (__pyx_v_k == 0); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":90 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":90 * return self.n * elif k == 0: * return self.varpos[0] # <<<<<<<<<<<<<< @@ -25565,7 +25560,7 @@ int __pyx_f_3_sa_6Phrase_chunklen(struct __pyx_obj_3_sa_Phrase *__pyx_v_self, in goto __pyx_L3; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":91 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":91 * elif k == 0: * return self.varpos[0] * elif k == self.n_vars: # <<<<<<<<<<<<<< @@ -25575,7 +25570,7 @@ int __pyx_f_3_sa_6Phrase_chunklen(struct __pyx_obj_3_sa_Phrase *__pyx_v_self, in __pyx_t_1 = (__pyx_v_k == __pyx_v_self->n_vars); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":92 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":92 * return self.varpos[0] * elif k == self.n_vars: * return self.n-self.varpos[k-1]-1 # <<<<<<<<<<<<<< @@ -25588,7 +25583,7 @@ int __pyx_f_3_sa_6Phrase_chunklen(struct __pyx_obj_3_sa_Phrase *__pyx_v_self, in } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":94 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":94 * return self.n-self.varpos[k-1]-1 * else: * return self.varpos[k]-self.varpos[k-1]-1 # <<<<<<<<<<<<<< @@ -25617,7 +25612,7 @@ static PyObject *__pyx_pw_3_sa_6Phrase_17clen(PyObject *__pyx_v_self, PyObject * return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":96 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":96 * return self.varpos[k]-self.varpos[k-1]-1 * * def clen(self, k): # <<<<<<<<<<<<<< @@ -25635,7 +25630,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_16clen(struct __pyx_obj_3_sa_Phrase *__py int __pyx_clineno = 0; __Pyx_RefNannySetupContext("clen", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":97 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":97 * * def clen(self, k): * return self.chunklen(k) # <<<<<<<<<<<<<< @@ -25673,7 +25668,7 @@ static PyObject *__pyx_pw_3_sa_6Phrase_19getchunk(PyObject *__pyx_v_self, PyObje return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":99 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":99 * return self.chunklen(k) * * def getchunk(self, ci): # <<<<<<<<<<<<<< @@ -25696,7 +25691,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_18getchunk(struct __pyx_obj_3_sa_Phrase * int __pyx_clineno = 0; __Pyx_RefNannySetupContext("getchunk", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":101 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":101 * def getchunk(self, ci): * cdef int start, stop * start = self.chunkpos(ci) # <<<<<<<<<<<<<< @@ -25706,7 +25701,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_18getchunk(struct __pyx_obj_3_sa_Phrase * __pyx_t_1 = __Pyx_PyInt_AsInt(__pyx_v_ci); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[7]; __pyx_lineno = 101; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_start = ((struct __pyx_vtabstruct_3_sa_Phrase *)__pyx_v_self->__pyx_vtab)->chunkpos(__pyx_v_self, __pyx_t_1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":102 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":102 * cdef int start, stop * start = self.chunkpos(ci) * stop = start+self.chunklen(ci) # <<<<<<<<<<<<<< @@ -25716,7 +25711,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_18getchunk(struct __pyx_obj_3_sa_Phrase * __pyx_t_1 = __Pyx_PyInt_AsInt(__pyx_v_ci); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[7]; __pyx_lineno = 102; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_stop = (__pyx_v_start + ((struct __pyx_vtabstruct_3_sa_Phrase *)__pyx_v_self->__pyx_vtab)->chunklen(__pyx_v_self, __pyx_t_1)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":103 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":103 * start = self.chunkpos(ci) * stop = start+self.chunklen(ci) * chunk = [] # <<<<<<<<<<<<<< @@ -25728,7 +25723,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_18getchunk(struct __pyx_obj_3_sa_Phrase * __pyx_v_chunk = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":104 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":104 * stop = start+self.chunklen(ci) * chunk = [] * for i from start <= i < stop: # <<<<<<<<<<<<<< @@ -25738,7 +25733,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_18getchunk(struct __pyx_obj_3_sa_Phrase * __pyx_t_1 = __pyx_v_stop; for (__pyx_v_i = __pyx_v_start; __pyx_v_i < __pyx_t_1; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":105 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":105 * chunk = [] * for i from start <= i < stop: * chunk.append(self.syms[i]) # <<<<<<<<<<<<<< @@ -25751,7 +25746,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_18getchunk(struct __pyx_obj_3_sa_Phrase * __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":106 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":106 * for i from start <= i < stop: * chunk.append(self.syms[i]) * return chunk # <<<<<<<<<<<<<< @@ -25789,7 +25784,7 @@ static int __pyx_pw_3_sa_6Phrase_21__cmp__(PyObject *__pyx_v_self, PyObject *__p } #endif /*!(#if PY_MAJOR_VERSION < 3)*/ -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":108 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":108 * return chunk * * def __cmp__(self, other): # <<<<<<<<<<<<<< @@ -25812,7 +25807,7 @@ static int __pyx_pf_3_sa_6Phrase_20__cmp__(struct __pyx_obj_3_sa_Phrase *__pyx_v int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__cmp__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":111 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":111 * cdef Phrase otherp * cdef int i * otherp = other # <<<<<<<<<<<<<< @@ -25823,7 +25818,7 @@ static int __pyx_pf_3_sa_6Phrase_20__cmp__(struct __pyx_obj_3_sa_Phrase *__pyx_v __Pyx_INCREF(__pyx_v_other); __pyx_v_otherp = ((struct __pyx_obj_3_sa_Phrase *)__pyx_v_other); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":112 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":112 * cdef int i * otherp = other * for i from 0 <= i < min(self.n, otherp.n): # <<<<<<<<<<<<<< @@ -25840,7 +25835,7 @@ static int __pyx_pf_3_sa_6Phrase_20__cmp__(struct __pyx_obj_3_sa_Phrase *__pyx_v __pyx_t_1 = __pyx_t_3; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_1; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":113 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":113 * otherp = other * for i from 0 <= i < min(self.n, otherp.n): * if self.syms[i] < otherp.syms[i]: # <<<<<<<<<<<<<< @@ -25850,7 +25845,7 @@ static int __pyx_pf_3_sa_6Phrase_20__cmp__(struct __pyx_obj_3_sa_Phrase *__pyx_v __pyx_t_4 = ((__pyx_v_self->syms[__pyx_v_i]) < (__pyx_v_otherp->syms[__pyx_v_i])); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":114 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":114 * for i from 0 <= i < min(self.n, otherp.n): * if self.syms[i] < otherp.syms[i]: * return -1 # <<<<<<<<<<<<<< @@ -25862,7 +25857,7 @@ static int __pyx_pf_3_sa_6Phrase_20__cmp__(struct __pyx_obj_3_sa_Phrase *__pyx_v goto __pyx_L5; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":115 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":115 * if self.syms[i] < otherp.syms[i]: * return -1 * elif self.syms[i] > otherp.syms[i]: # <<<<<<<<<<<<<< @@ -25872,7 +25867,7 @@ static int __pyx_pf_3_sa_6Phrase_20__cmp__(struct __pyx_obj_3_sa_Phrase *__pyx_v __pyx_t_4 = ((__pyx_v_self->syms[__pyx_v_i]) > (__pyx_v_otherp->syms[__pyx_v_i])); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":116 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":116 * return -1 * elif self.syms[i] > otherp.syms[i]: * return 1 # <<<<<<<<<<<<<< @@ -25886,7 +25881,7 @@ static int __pyx_pf_3_sa_6Phrase_20__cmp__(struct __pyx_obj_3_sa_Phrase *__pyx_v __pyx_L5:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":117 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":117 * elif self.syms[i] > otherp.syms[i]: * return 1 * if self.n < otherp.n: # <<<<<<<<<<<<<< @@ -25896,7 +25891,7 @@ static int __pyx_pf_3_sa_6Phrase_20__cmp__(struct __pyx_obj_3_sa_Phrase *__pyx_v __pyx_t_4 = (__pyx_v_self->n < __pyx_v_otherp->n); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":118 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":118 * return 1 * if self.n < otherp.n: * return -1 # <<<<<<<<<<<<<< @@ -25908,7 +25903,7 @@ static int __pyx_pf_3_sa_6Phrase_20__cmp__(struct __pyx_obj_3_sa_Phrase *__pyx_v goto __pyx_L6; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":119 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":119 * if self.n < otherp.n: * return -1 * elif self.n > otherp.n: # <<<<<<<<<<<<<< @@ -25918,7 +25913,7 @@ static int __pyx_pf_3_sa_6Phrase_20__cmp__(struct __pyx_obj_3_sa_Phrase *__pyx_v __pyx_t_4 = (__pyx_v_self->n > __pyx_v_otherp->n); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":120 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":120 * return -1 * elif self.n > otherp.n: * return 1 # <<<<<<<<<<<<<< @@ -25931,7 +25926,7 @@ static int __pyx_pf_3_sa_6Phrase_20__cmp__(struct __pyx_obj_3_sa_Phrase *__pyx_v } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":122 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":122 * return 1 * else: * return 0 # <<<<<<<<<<<<<< @@ -25966,7 +25961,7 @@ static Py_hash_t __pyx_pw_3_sa_6Phrase_23__hash__(PyObject *__pyx_v_self) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":124 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":124 * return 0 * * def __hash__(self): # <<<<<<<<<<<<<< @@ -25983,7 +25978,7 @@ static Py_hash_t __pyx_pf_3_sa_6Phrase_22__hash__(struct __pyx_obj_3_sa_Phrase * int __pyx_t_2; __Pyx_RefNannySetupContext("__hash__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":127 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":127 * cdef int i * cdef unsigned h * h = 0 # <<<<<<<<<<<<<< @@ -25992,7 +25987,7 @@ static Py_hash_t __pyx_pf_3_sa_6Phrase_22__hash__(struct __pyx_obj_3_sa_Phrase * */ __pyx_v_h = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":128 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":128 * cdef unsigned h * h = 0 * for i from 0 <= i < self.n: # <<<<<<<<<<<<<< @@ -26002,7 +25997,7 @@ static Py_hash_t __pyx_pf_3_sa_6Phrase_22__hash__(struct __pyx_obj_3_sa_Phrase * __pyx_t_1 = __pyx_v_self->n; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_1; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":129 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":129 * h = 0 * for i from 0 <= i < self.n: * if self.syms[i] > 0: # <<<<<<<<<<<<<< @@ -26012,7 +26007,7 @@ static Py_hash_t __pyx_pf_3_sa_6Phrase_22__hash__(struct __pyx_obj_3_sa_Phrase * __pyx_t_2 = ((__pyx_v_self->syms[__pyx_v_i]) > 0); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":130 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":130 * for i from 0 <= i < self.n: * if self.syms[i] > 0: * h = (h << 1) + self.syms[i] # <<<<<<<<<<<<<< @@ -26024,7 +26019,7 @@ static Py_hash_t __pyx_pf_3_sa_6Phrase_22__hash__(struct __pyx_obj_3_sa_Phrase * } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":132 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":132 * h = (h << 1) + self.syms[i] * else: * h = (h << 1) + -self.syms[i] # <<<<<<<<<<<<<< @@ -26036,7 +26031,7 @@ static Py_hash_t __pyx_pf_3_sa_6Phrase_22__hash__(struct __pyx_obj_3_sa_Phrase * __pyx_L5:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":133 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":133 * else: * h = (h << 1) + -self.syms[i] * return h # <<<<<<<<<<<<<< @@ -26064,7 +26059,7 @@ static Py_ssize_t __pyx_pw_3_sa_6Phrase_25__len__(PyObject *__pyx_v_self) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":135 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":135 * return h * * def __len__(self): # <<<<<<<<<<<<<< @@ -26077,7 +26072,7 @@ static Py_ssize_t __pyx_pf_3_sa_6Phrase_24__len__(struct __pyx_obj_3_sa_Phrase * __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("__len__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":136 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":136 * * def __len__(self): * return self.n # <<<<<<<<<<<<<< @@ -26104,7 +26099,7 @@ static PyObject *__pyx_pw_3_sa_6Phrase_27__getitem__(PyObject *__pyx_v_self, PyO return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":138 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":138 * return self.n * * def __getitem__(self, i): # <<<<<<<<<<<<<< @@ -26122,7 +26117,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_26__getitem__(struct __pyx_obj_3_sa_Phras int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__getitem__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":139 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":139 * * def __getitem__(self, i): * return self.syms[i] # <<<<<<<<<<<<<< @@ -26161,7 +26156,7 @@ static PyObject *__pyx_pw_3_sa_6Phrase_29__iter__(PyObject *__pyx_v_self) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":141 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":141 * return self.syms[i] * * def __iter__(self): # <<<<<<<<<<<<<< @@ -26223,7 +26218,7 @@ static PyObject *__pyx_gb_3_sa_6Phrase_30generator2(__pyx_GeneratorObject *__pyx __pyx_L3_first_run:; if (unlikely(!__pyx_sent_value)) {__pyx_filename = __pyx_f[7]; __pyx_lineno = 141; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":143 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":143 * def __iter__(self): * cdef int i * for i from 0 <= i < self.n: # <<<<<<<<<<<<<< @@ -26233,7 +26228,7 @@ static PyObject *__pyx_gb_3_sa_6Phrase_30generator2(__pyx_GeneratorObject *__pyx __pyx_t_1 = __pyx_cur_scope->__pyx_v_self->n; for (__pyx_cur_scope->__pyx_v_i = 0; __pyx_cur_scope->__pyx_v_i < __pyx_t_1; __pyx_cur_scope->__pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":144 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":144 * cdef int i * for i from 0 <= i < self.n: * yield self.syms[i] # <<<<<<<<<<<<<< @@ -26323,7 +26318,7 @@ static PyObject *__pyx_pw_3_sa_6Phrase_32subst(PyObject *__pyx_v_self, PyObject return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":146 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":146 * yield self.syms[i] * * def subst(self, start, children): # <<<<<<<<<<<<<< @@ -26346,7 +26341,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_31subst(struct __pyx_obj_3_sa_Phrase *__p __Pyx_RefNannySetupContext("subst", 0); __Pyx_INCREF(__pyx_v_start); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":148 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":148 * def subst(self, start, children): * cdef int i * for i from 0 <= i < self.n: # <<<<<<<<<<<<<< @@ -26356,7 +26351,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_31subst(struct __pyx_obj_3_sa_Phrase *__p __pyx_t_1 = __pyx_v_self->n; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_1; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":149 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":149 * cdef int i * for i from 0 <= i < self.n: * if sym_isvar(self.syms[i]): # <<<<<<<<<<<<<< @@ -26366,7 +26361,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_31subst(struct __pyx_obj_3_sa_Phrase *__p __pyx_t_2 = __pyx_f_3_sa_sym_isvar((__pyx_v_self->syms[__pyx_v_i])); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":150 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":150 * for i from 0 <= i < self.n: * if sym_isvar(self.syms[i]): * start = start + children[sym_getindex(self.syms[i])-1] # <<<<<<<<<<<<<< @@ -26386,7 +26381,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_31subst(struct __pyx_obj_3_sa_Phrase *__p } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":152 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":152 * start = start + children[sym_getindex(self.syms[i])-1] * else: * start = start + (self.syms[i],) # <<<<<<<<<<<<<< @@ -26410,7 +26405,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_31subst(struct __pyx_obj_3_sa_Phrase *__p __pyx_L5:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":153 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":153 * else: * start = start + (self.syms[i],) * return start # <<<<<<<<<<<<<< @@ -26447,7 +26442,7 @@ static PyObject *__pyx_pw_3_sa_6Phrase_5words_1__get__(PyObject *__pyx_v_self) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":156 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":156 * * property words: * def __get__(self): # <<<<<<<<<<<<<< @@ -26471,7 +26466,7 @@ static PyObject *__pyx_pf_3_sa_6Phrase_5words___get__(struct __pyx_obj_3_sa_Phra int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__get__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":157 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":157 * property words: * def __get__(self): * return [sym_tostring(w) for w in self if not sym_isvar(w)] # <<<<<<<<<<<<<< @@ -26566,7 +26561,7 @@ static int __pyx_pw_3_sa_4Rule_1__cinit__(PyObject *__pyx_v_self, PyObject *__py static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__lhs,&__pyx_n_s__f,&__pyx_n_s__e,&__pyx_n_s__scores,&__pyx_n_s__word_alignments,0}; PyObject* values[5] = {0,0,0,0,0}; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":161 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":161 * cdef class Rule: * * def __cinit__(self, int lhs, Phrase f, Phrase e, scores=None, word_alignments=None): # <<<<<<<<<<<<<< @@ -26663,7 +26658,7 @@ static int __pyx_pf_3_sa_4Rule___cinit__(struct __pyx_obj_3_sa_Rule *__pyx_v_sel int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":162 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":162 * * def __cinit__(self, int lhs, Phrase f, Phrase e, scores=None, word_alignments=None): * if not sym_isvar(lhs): raise Exception('Invalid LHS symbol: %d' % lhs) # <<<<<<<<<<<<<< @@ -26692,7 +26687,7 @@ static int __pyx_pf_3_sa_4Rule___cinit__(struct __pyx_obj_3_sa_Rule *__pyx_v_sel } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":163 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":163 * def __cinit__(self, int lhs, Phrase f, Phrase e, scores=None, word_alignments=None): * if not sym_isvar(lhs): raise Exception('Invalid LHS symbol: %d' % lhs) * self.lhs = lhs # <<<<<<<<<<<<<< @@ -26701,7 +26696,7 @@ static int __pyx_pf_3_sa_4Rule___cinit__(struct __pyx_obj_3_sa_Rule *__pyx_v_sel */ __pyx_v_self->lhs = __pyx_v_lhs; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":164 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":164 * if not sym_isvar(lhs): raise Exception('Invalid LHS symbol: %d' % lhs) * self.lhs = lhs * self.f = f # <<<<<<<<<<<<<< @@ -26714,7 +26709,7 @@ static int __pyx_pf_3_sa_4Rule___cinit__(struct __pyx_obj_3_sa_Rule *__pyx_v_sel __Pyx_DECREF(((PyObject *)__pyx_v_self->f)); __pyx_v_self->f = __pyx_v_f; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":165 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":165 * self.lhs = lhs * self.f = f * self.e = e # <<<<<<<<<<<<<< @@ -26727,7 +26722,7 @@ static int __pyx_pf_3_sa_4Rule___cinit__(struct __pyx_obj_3_sa_Rule *__pyx_v_sel __Pyx_DECREF(((PyObject *)__pyx_v_self->e)); __pyx_v_self->e = __pyx_v_e; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":166 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":166 * self.f = f * self.e = e * self.word_alignments = word_alignments # <<<<<<<<<<<<<< @@ -26740,7 +26735,7 @@ static int __pyx_pf_3_sa_4Rule___cinit__(struct __pyx_obj_3_sa_Rule *__pyx_v_sel __Pyx_DECREF(__pyx_v_self->word_alignments); __pyx_v_self->word_alignments = __pyx_v_word_alignments; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":167 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":167 * self.e = e * self.word_alignments = word_alignments * self.scores = scores # <<<<<<<<<<<<<< @@ -26777,7 +26772,7 @@ static Py_hash_t __pyx_pw_3_sa_4Rule_3__hash__(PyObject *__pyx_v_self) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":169 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":169 * self.scores = scores * * def __hash__(self): # <<<<<<<<<<<<<< @@ -26796,7 +26791,7 @@ static Py_hash_t __pyx_pf_3_sa_4Rule_2__hash__(struct __pyx_obj_3_sa_Rule *__pyx int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__hash__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":170 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":170 * * def __hash__(self): * return hash((self.lhs, self.f, self.e)) # <<<<<<<<<<<<<< @@ -26852,7 +26847,7 @@ static int __pyx_pw_3_sa_4Rule_5__cmp__(PyObject *__pyx_v_self, PyObject *__pyx_ } #endif /*!(#if PY_MAJOR_VERSION < 3)*/ -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":172 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":172 * return hash((self.lhs, self.f, self.e)) * * def __cmp__(self, Rule other): # <<<<<<<<<<<<<< @@ -26873,7 +26868,7 @@ static int __pyx_pf_3_sa_4Rule_4__cmp__(struct __pyx_obj_3_sa_Rule *__pyx_v_self int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__cmp__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":173 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":173 * * def __cmp__(self, Rule other): * return cmp((self.lhs, self.f, self.e, self.word_alignments), # <<<<<<<<<<<<<< @@ -26897,7 +26892,7 @@ static int __pyx_pf_3_sa_4Rule_4__cmp__(struct __pyx_obj_3_sa_Rule *__pyx_v_self __Pyx_GIVEREF(__pyx_v_self->word_alignments); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":174 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":174 * def __cmp__(self, Rule other): * return cmp((self.lhs, self.f, self.e, self.word_alignments), * (other.lhs, other.f, other.e, self.word_alignments)) # <<<<<<<<<<<<<< @@ -26966,7 +26961,7 @@ static PyObject *__pyx_pw_3_sa_4Rule_7fmerge(PyObject *__pyx_v_self, PyObject *_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":176 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":176 * (other.lhs, other.f, other.e, self.word_alignments)) * * def fmerge(self, Phrase f): # <<<<<<<<<<<<<< @@ -26984,7 +26979,7 @@ static PyObject *__pyx_pf_3_sa_4Rule_6fmerge(struct __pyx_obj_3_sa_Rule *__pyx_v int __pyx_clineno = 0; __Pyx_RefNannySetupContext("fmerge", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":177 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":177 * * def fmerge(self, Phrase f): * if self.f == f: # <<<<<<<<<<<<<< @@ -26996,7 +26991,7 @@ static PyObject *__pyx_pf_3_sa_4Rule_6fmerge(struct __pyx_obj_3_sa_Rule *__pyx_v __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":178 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":178 * def fmerge(self, Phrase f): * if self.f == f: * self.f = f # <<<<<<<<<<<<<< @@ -27035,7 +27030,7 @@ static PyObject *__pyx_pw_3_sa_4Rule_9arity(PyObject *__pyx_v_self, CYTHON_UNUSE return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":180 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":180 * self.f = f * * def arity(self): # <<<<<<<<<<<<<< @@ -27053,7 +27048,7 @@ static PyObject *__pyx_pf_3_sa_4Rule_8arity(struct __pyx_obj_3_sa_Rule *__pyx_v_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("arity", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":181 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":181 * * def arity(self): * return self.f.arity() # <<<<<<<<<<<<<< @@ -27095,7 +27090,7 @@ static PyObject *__pyx_pw_3_sa_4Rule_11__str__(PyObject *__pyx_v_self) { } static PyObject *__pyx_gb_3_sa_4Rule_7__str___2generator11(__pyx_GeneratorObject *__pyx_generator, PyObject *__pyx_sent_value); /* proto */ -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":187 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":187 * fields = [sym_tostring(self.lhs), str(self.f), str(self.e), str(self.scores)] * if self.word_alignments is not None: * fields.append(' '.join('%d-%d' % a for a in self.alignments())) # <<<<<<<<<<<<<< @@ -27240,7 +27235,7 @@ static PyObject *__pyx_gb_3_sa_4Rule_7__str___2generator11(__pyx_GeneratorObject return NULL; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":183 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":183 * return self.f.arity() * * def __str__(self): # <<<<<<<<<<<<<< @@ -27274,7 +27269,7 @@ static PyObject *__pyx_pf_3_sa_4Rule_10__str__(struct __pyx_obj_3_sa_Rule *__pyx __Pyx_INCREF((PyObject *)__pyx_cur_scope->__pyx_v_self); __Pyx_GIVEREF((PyObject *)__pyx_cur_scope->__pyx_v_self); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":185 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":185 * def __str__(self): * cdef unsigned i * fields = [sym_tostring(self.lhs), str(self.f), str(self.e), str(self.scores)] # <<<<<<<<<<<<<< @@ -27324,7 +27319,7 @@ static PyObject *__pyx_pf_3_sa_4Rule_10__str__(struct __pyx_obj_3_sa_Rule *__pyx __pyx_v_fields = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":186 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":186 * cdef unsigned i * fields = [sym_tostring(self.lhs), str(self.f), str(self.e), str(self.scores)] * if self.word_alignments is not None: # <<<<<<<<<<<<<< @@ -27334,7 +27329,7 @@ static PyObject *__pyx_pf_3_sa_4Rule_10__str__(struct __pyx_obj_3_sa_Rule *__pyx __pyx_t_6 = (__pyx_cur_scope->__pyx_v_self->word_alignments != Py_None); if (__pyx_t_6) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":187 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":187 * fields = [sym_tostring(self.lhs), str(self.f), str(self.e), str(self.scores)] * if self.word_alignments is not None: * fields.append(' '.join('%d-%d' % a for a in self.alignments())) # <<<<<<<<<<<<<< @@ -27360,7 +27355,7 @@ static PyObject *__pyx_pf_3_sa_4Rule_10__str__(struct __pyx_obj_3_sa_Rule *__pyx } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":188 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":188 * if self.word_alignments is not None: * fields.append(' '.join('%d-%d' % a for a in self.alignments())) * return ' ||| '.join(fields) # <<<<<<<<<<<<<< @@ -27413,7 +27408,7 @@ static PyObject *__pyx_pw_3_sa_4Rule_13alignments(PyObject *__pyx_v_self, CYTHON return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":190 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":190 * return ' ||| '.join(fields) * * def alignments(self): # <<<<<<<<<<<<<< @@ -27479,7 +27474,7 @@ static PyObject *__pyx_gb_3_sa_4Rule_14generator3(__pyx_GeneratorObject *__pyx_g __pyx_L3_first_run:; if (unlikely(!__pyx_sent_value)) {__pyx_filename = __pyx_f[7]; __pyx_lineno = 190; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":191 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":191 * * def alignments(self): * for point in self.word_alignments: # <<<<<<<<<<<<<< @@ -27525,7 +27520,7 @@ static PyObject *__pyx_gb_3_sa_4Rule_14generator3(__pyx_GeneratorObject *__pyx_g __pyx_cur_scope->__pyx_v_point = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rule.pxi":192 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rule.pxi":192 * def alignments(self): * for point in self.word_alignments: * yield point/65536, point%65536 # <<<<<<<<<<<<<< @@ -27640,7 +27635,7 @@ static PyObject *__pyx_pf_3_sa_4Rule_1e___get__(struct __pyx_obj_3_sa_Rule *__py return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":21 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":21 * int arr_len * * cdef _Trie_Node* new_trie_node(): # <<<<<<<<<<<<<< @@ -27654,7 +27649,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_new_trie_node(void) { __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("new_trie_node", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":23 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":23 * cdef _Trie_Node* new_trie_node(): * cdef _Trie_Node* node * node = <_Trie_Node*> malloc(sizeof(_Trie_Node)) # <<<<<<<<<<<<<< @@ -27663,7 +27658,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_new_trie_node(void) { */ __pyx_v_node = ((struct __pyx_t_3_sa__Trie_Node *)malloc((sizeof(struct __pyx_t_3_sa__Trie_Node)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":24 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":24 * cdef _Trie_Node* node * node = <_Trie_Node*> malloc(sizeof(_Trie_Node)) * node.root = NULL # <<<<<<<<<<<<<< @@ -27672,7 +27667,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_new_trie_node(void) { */ __pyx_v_node->root = NULL; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":25 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":25 * node = <_Trie_Node*> malloc(sizeof(_Trie_Node)) * node.root = NULL * node.arr_len = 0 # <<<<<<<<<<<<<< @@ -27681,7 +27676,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_new_trie_node(void) { */ __pyx_v_node->arr_len = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":26 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":26 * node.root = NULL * node.arr_len = 0 * node.arr = <int*> malloc(sizeof(0*sizeof(int))) # <<<<<<<<<<<<<< @@ -27690,7 +27685,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_new_trie_node(void) { */ __pyx_v_node->arr = ((int *)malloc((sizeof((0 * (sizeof(int))))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":27 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":27 * node.arr_len = 0 * node.arr = <int*> malloc(sizeof(0*sizeof(int))) * return node # <<<<<<<<<<<<<< @@ -27706,7 +27701,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_new_trie_node(void) { return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":29 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":29 * return node * * cdef _Trie_Edge* new_trie_edge(int val): # <<<<<<<<<<<<<< @@ -27720,7 +27715,7 @@ static struct __pyx_t_3_sa__Trie_Edge *__pyx_f_3_sa_new_trie_edge(int __pyx_v_va __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("new_trie_edge", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":31 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":31 * cdef _Trie_Edge* new_trie_edge(int val): * cdef _Trie_Edge* edge * edge = <_Trie_Edge*> malloc(sizeof(_Trie_Edge)) # <<<<<<<<<<<<<< @@ -27729,7 +27724,7 @@ static struct __pyx_t_3_sa__Trie_Edge *__pyx_f_3_sa_new_trie_edge(int __pyx_v_va */ __pyx_v_edge = ((struct __pyx_t_3_sa__Trie_Edge *)malloc((sizeof(struct __pyx_t_3_sa__Trie_Edge)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":32 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":32 * cdef _Trie_Edge* edge * edge = <_Trie_Edge*> malloc(sizeof(_Trie_Edge)) * edge.node = new_trie_node() # <<<<<<<<<<<<<< @@ -27738,7 +27733,7 @@ static struct __pyx_t_3_sa__Trie_Edge *__pyx_f_3_sa_new_trie_edge(int __pyx_v_va */ __pyx_v_edge->node = __pyx_f_3_sa_new_trie_node(); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":33 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":33 * edge = <_Trie_Edge*> malloc(sizeof(_Trie_Edge)) * edge.node = new_trie_node() * edge.bigger = NULL # <<<<<<<<<<<<<< @@ -27747,7 +27742,7 @@ static struct __pyx_t_3_sa__Trie_Edge *__pyx_f_3_sa_new_trie_edge(int __pyx_v_va */ __pyx_v_edge->bigger = NULL; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":34 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":34 * edge.node = new_trie_node() * edge.bigger = NULL * edge.smaller = NULL # <<<<<<<<<<<<<< @@ -27756,7 +27751,7 @@ static struct __pyx_t_3_sa__Trie_Edge *__pyx_f_3_sa_new_trie_edge(int __pyx_v_va */ __pyx_v_edge->smaller = NULL; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":35 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":35 * edge.bigger = NULL * edge.smaller = NULL * edge.val = val # <<<<<<<<<<<<<< @@ -27765,7 +27760,7 @@ static struct __pyx_t_3_sa__Trie_Edge *__pyx_f_3_sa_new_trie_edge(int __pyx_v_va */ __pyx_v_edge->val = __pyx_v_val; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":36 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":36 * edge.smaller = NULL * edge.val = val * return edge # <<<<<<<<<<<<<< @@ -27781,7 +27776,7 @@ static struct __pyx_t_3_sa__Trie_Edge *__pyx_f_3_sa_new_trie_edge(int __pyx_v_va return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":38 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":38 * return edge * * cdef free_trie_node(_Trie_Node* node): # <<<<<<<<<<<<<< @@ -27799,7 +27794,7 @@ static PyObject *__pyx_f_3_sa_free_trie_node(struct __pyx_t_3_sa__Trie_Node *__p int __pyx_clineno = 0; 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} -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":43 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":43 * free(node.arr) * * cdef free_trie_edge(_Trie_Edge* edge): # <<<<<<<<<<<<<< @@ -27862,7 +27857,7 @@ static PyObject *__pyx_f_3_sa_free_trie_edge(struct __pyx_t_3_sa__Trie_Edge *__p int __pyx_clineno = 0; __Pyx_RefNannySetupContext("free_trie_edge", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":44 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":44 * * cdef free_trie_edge(_Trie_Edge* edge): * if edge != NULL: # <<<<<<<<<<<<<< @@ -27872,7 +27867,7 @@ static PyObject *__pyx_f_3_sa_free_trie_edge(struct __pyx_t_3_sa__Trie_Edge *__p __pyx_t_1 = (__pyx_v_edge != NULL); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":45 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":45 * cdef free_trie_edge(_Trie_Edge* edge): * if edge != NULL: * free_trie_node(edge.node) # <<<<<<<<<<<<<< @@ -27883,7 +27878,7 @@ static PyObject *__pyx_f_3_sa_free_trie_edge(struct __pyx_t_3_sa__Trie_Edge *__p __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":46 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":46 * if edge != NULL: * free_trie_node(edge.node) * free_trie_edge(edge.bigger) # <<<<<<<<<<<<<< @@ -27894,7 +27889,7 @@ static PyObject *__pyx_f_3_sa_free_trie_edge(struct __pyx_t_3_sa__Trie_Edge *__p __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":47 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":47 * free_trie_node(edge.node) * free_trie_edge(edge.bigger) * free_trie_edge(edge.smaller) # <<<<<<<<<<<<<< @@ -27920,7 +27915,7 @@ static PyObject *__pyx_f_3_sa_free_trie_edge(struct __pyx_t_3_sa__Trie_Edge *__p return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":49 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":49 * free_trie_edge(edge.smaller) * * cdef _Trie_Node* trie_find(_Trie_Node* node, int val): # <<<<<<<<<<<<<< @@ -27937,7 +27932,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_find(struct __pyx_t_3_s int __pyx_t_3; __Pyx_RefNannySetupContext("trie_find", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":51 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":51 * cdef _Trie_Node* trie_find(_Trie_Node* node, int val): * cdef _Trie_Edge* cur * cur = node.root # <<<<<<<<<<<<<< @@ -27946,7 +27941,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_find(struct __pyx_t_3_s */ __pyx_v_cur = __pyx_v_node->root; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":52 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":52 * cdef _Trie_Edge* cur * cur = node.root * while cur != NULL and cur.val != val: # <<<<<<<<<<<<<< @@ -27963,7 +27958,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_find(struct __pyx_t_3_s } if (!__pyx_t_3) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":53 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":53 * cur = node.root * while cur != NULL and cur.val != val: * if val > cur.val: # <<<<<<<<<<<<<< @@ -27973,7 +27968,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_find(struct __pyx_t_3_s __pyx_t_3 = (__pyx_v_val > __pyx_v_cur->val); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":54 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":54 * while cur != NULL and cur.val != val: * if val > cur.val: * cur = cur.bigger # <<<<<<<<<<<<<< @@ -27984,7 +27979,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_find(struct __pyx_t_3_s goto __pyx_L5; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":55 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":55 * if val > cur.val: * cur = cur.bigger * elif val < cur.val: # <<<<<<<<<<<<<< @@ -27994,7 +27989,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_find(struct __pyx_t_3_s __pyx_t_3 = (__pyx_v_val < __pyx_v_cur->val); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":56 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":56 * cur = cur.bigger * elif val < cur.val: * cur = cur.smaller # <<<<<<<<<<<<<< @@ -28007,7 +28002,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_find(struct __pyx_t_3_s __pyx_L5:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":57 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":57 * elif val < cur.val: * cur = cur.smaller * if cur == NULL: # <<<<<<<<<<<<<< @@ -28017,7 +28012,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_find(struct __pyx_t_3_s __pyx_t_3 = (__pyx_v_cur == NULL); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":58 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":58 * cur = cur.smaller * if cur == NULL: * return NULL # <<<<<<<<<<<<<< @@ -28030,7 +28025,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_find(struct __pyx_t_3_s } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":60 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":60 * return NULL * else: * return cur.node # <<<<<<<<<<<<<< @@ -28048,7 +28043,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_find(struct __pyx_t_3_s return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":62 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":62 * return cur.node * * cdef trie_node_data_append(_Trie_Node* node, int val): # <<<<<<<<<<<<<< @@ -28062,7 +28057,7 @@ static PyObject *__pyx_f_3_sa_trie_node_data_append(struct __pyx_t_3_sa__Trie_No __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("trie_node_data_append", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":64 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":64 * cdef trie_node_data_append(_Trie_Node* node, int val): * cdef int new_len * new_len = node.arr_len + 1 # <<<<<<<<<<<<<< @@ -28071,7 +28066,7 @@ static PyObject *__pyx_f_3_sa_trie_node_data_append(struct __pyx_t_3_sa__Trie_No */ __pyx_v_new_len = (__pyx_v_node->arr_len + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":65 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":65 * cdef int new_len * new_len = node.arr_len + 1 * node.arr = <int*> realloc(node.arr, new_len*sizeof(int)) # <<<<<<<<<<<<<< @@ -28080,7 +28075,7 @@ static PyObject *__pyx_f_3_sa_trie_node_data_append(struct __pyx_t_3_sa__Trie_No */ __pyx_v_node->arr = ((int *)realloc(__pyx_v_node->arr, (__pyx_v_new_len * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":66 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":66 * new_len = node.arr_len + 1 * node.arr = <int*> realloc(node.arr, new_len*sizeof(int)) * node.arr[node.arr_len] = val # <<<<<<<<<<<<<< @@ -28089,7 +28084,7 @@ static PyObject *__pyx_f_3_sa_trie_node_data_append(struct __pyx_t_3_sa__Trie_No */ (__pyx_v_node->arr[__pyx_v_node->arr_len]) = __pyx_v_val; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":67 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":67 * node.arr = <int*> realloc(node.arr, new_len*sizeof(int)) * node.arr[node.arr_len] = val * node.arr_len = new_len # <<<<<<<<<<<<<< @@ -28104,7 +28099,7 @@ static PyObject *__pyx_f_3_sa_trie_node_data_append(struct __pyx_t_3_sa__Trie_No return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":69 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":69 * node.arr_len = new_len * * cdef trie_node_data_extend(_Trie_Node* node, int* vals, int num_vals): # <<<<<<<<<<<<<< @@ -28118,7 +28113,7 @@ static PyObject *__pyx_f_3_sa_trie_node_data_extend(struct __pyx_t_3_sa__Trie_No __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("trie_node_data_extend", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":71 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":71 * cdef trie_node_data_extend(_Trie_Node* node, int* vals, int num_vals): * cdef int new_len * new_len = node.arr_len + num_vals # <<<<<<<<<<<<<< @@ -28127,7 +28122,7 @@ static PyObject *__pyx_f_3_sa_trie_node_data_extend(struct __pyx_t_3_sa__Trie_No */ __pyx_v_new_len = (__pyx_v_node->arr_len + __pyx_v_num_vals); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":72 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":72 * cdef int new_len * new_len = node.arr_len + num_vals * node.arr = <int*> realloc(node.arr, new_len*sizeof(int)) # <<<<<<<<<<<<<< @@ -28136,7 +28131,7 @@ static PyObject *__pyx_f_3_sa_trie_node_data_extend(struct __pyx_t_3_sa__Trie_No */ __pyx_v_node->arr = ((int *)realloc(__pyx_v_node->arr, (__pyx_v_new_len * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":73 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":73 * new_len = node.arr_len + num_vals * node.arr = <int*> realloc(node.arr, new_len*sizeof(int)) * memcpy(node.arr + node.arr_len, vals, num_vals*sizeof(int)) # <<<<<<<<<<<<<< @@ -28145,7 +28140,7 @@ static PyObject *__pyx_f_3_sa_trie_node_data_extend(struct __pyx_t_3_sa__Trie_No */ memcpy((__pyx_v_node->arr + __pyx_v_node->arr_len), __pyx_v_vals, (__pyx_v_num_vals * (sizeof(int)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":74 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":74 * node.arr = <int*> realloc(node.arr, new_len*sizeof(int)) * memcpy(node.arr + node.arr_len, vals, num_vals*sizeof(int)) * node.arr_len = new_len # <<<<<<<<<<<<<< @@ -28160,7 +28155,7 @@ static PyObject *__pyx_f_3_sa_trie_node_data_extend(struct __pyx_t_3_sa__Trie_No return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":77 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":77 * * * cdef _Trie_Node* trie_insert(_Trie_Node* node, int val): # <<<<<<<<<<<<<< @@ -28177,7 +28172,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_insert(struct __pyx_t_3 int __pyx_t_3; __Pyx_RefNannySetupContext("trie_insert", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":79 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":79 * cdef _Trie_Node* trie_insert(_Trie_Node* node, int val): * cdef _Trie_Edge** cur * cur = &node.root # <<<<<<<<<<<<<< @@ -28186,7 +28181,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_insert(struct __pyx_t_3 */ __pyx_v_cur = (&__pyx_v_node->root); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":80 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":80 * cdef _Trie_Edge** cur * cur = &node.root * while cur[0] != NULL and cur[0].val != val: # <<<<<<<<<<<<<< @@ -28203,7 +28198,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_insert(struct __pyx_t_3 } if (!__pyx_t_3) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":81 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":81 * cur = &node.root * while cur[0] != NULL and cur[0].val != val: * if val > cur[0].val: # <<<<<<<<<<<<<< @@ -28213,7 +28208,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_insert(struct __pyx_t_3 __pyx_t_3 = (__pyx_v_val > (__pyx_v_cur[0])->val); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":82 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":82 * while cur[0] != NULL and cur[0].val != val: * if val > cur[0].val: * cur = &cur[0].bigger # <<<<<<<<<<<<<< @@ -28224,7 +28219,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_insert(struct __pyx_t_3 goto __pyx_L5; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":83 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":83 * if val > cur[0].val: * cur = &cur[0].bigger * elif val < cur[0].val: # <<<<<<<<<<<<<< @@ -28234,7 +28229,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_insert(struct __pyx_t_3 __pyx_t_3 = (__pyx_v_val < (__pyx_v_cur[0])->val); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":84 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":84 * cur = &cur[0].bigger * elif val < cur[0].val: * cur = &cur[0].smaller # <<<<<<<<<<<<<< @@ -28247,7 +28242,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_insert(struct __pyx_t_3 __pyx_L5:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":85 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":85 * elif val < cur[0].val: * cur = &cur[0].smaller * if cur[0] == NULL: # <<<<<<<<<<<<<< @@ -28257,7 +28252,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_insert(struct __pyx_t_3 __pyx_t_3 = ((__pyx_v_cur[0]) == NULL); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":86 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":86 * cur = &cur[0].smaller * if cur[0] == NULL: * cur[0] = new_trie_edge(val) # <<<<<<<<<<<<<< @@ -28269,7 +28264,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_insert(struct __pyx_t_3 } __pyx_L6:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":87 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":87 * if cur[0] == NULL: * cur[0] = new_trie_edge(val) * return cur[0].node # <<<<<<<<<<<<<< @@ -28285,7 +28280,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_trie_insert(struct __pyx_t_3 return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":89 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":89 * return cur[0].node * * cdef trie_node_to_map(_Trie_Node* node, result, prefix, int include_zeros): # <<<<<<<<<<<<<< @@ -28305,7 +28300,7 @@ static PyObject *__pyx_f_3_sa_trie_node_to_map(struct __pyx_t_3_sa__Trie_Node *_ int __pyx_clineno = 0; 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- /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":95 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":95 * arr = IntList() * free(arr.arr) * arr.arr = <int*> malloc(node.arr_len * sizeof(int)) # <<<<<<<<<<<<<< @@ -28350,7 +28345,7 @@ static PyObject *__pyx_f_3_sa_trie_node_to_map(struct __pyx_t_3_sa__Trie_Node *_ */ __pyx_v_arr->arr = ((int *)malloc((__pyx_v_node->arr_len * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":96 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":96 * free(arr.arr) * arr.arr = <int*> malloc(node.arr_len * sizeof(int)) * memcpy(arr.arr, node.arr, node.arr_len * sizeof(int)) # <<<<<<<<<<<<<< @@ -28359,7 +28354,7 @@ static PyObject *__pyx_f_3_sa_trie_node_to_map(struct __pyx_t_3_sa__Trie_Node *_ */ memcpy(__pyx_v_arr->arr, __pyx_v_node->arr, (__pyx_v_node->arr_len * (sizeof(int)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":97 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":97 * arr.arr = <int*> malloc(node.arr_len * sizeof(int)) * memcpy(arr.arr, node.arr, node.arr_len * sizeof(int)) * arr.len = node.arr_len # <<<<<<<<<<<<<< @@ -28368,7 +28363,7 @@ static PyObject *__pyx_f_3_sa_trie_node_to_map(struct __pyx_t_3_sa__Trie_Node *_ */ __pyx_v_arr->len = __pyx_v_node->arr_len; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":98 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":98 * memcpy(arr.arr, node.arr, node.arr_len * sizeof(int)) * arr.len = node.arr_len * arr.size = node.arr_len # <<<<<<<<<<<<<< @@ -28377,7 +28372,7 @@ static PyObject *__pyx_f_3_sa_trie_node_to_map(struct __pyx_t_3_sa__Trie_Node *_ */ __pyx_v_arr->size = __pyx_v_node->arr_len; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":99 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":99 * arr.len = node.arr_len * arr.size = node.arr_len * result[prefix] = arr # <<<<<<<<<<<<<< @@ -28389,7 +28384,7 @@ static PyObject *__pyx_f_3_sa_trie_node_to_map(struct __pyx_t_3_sa__Trie_Node *_ } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":100 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":100 * arr.size = node.arr_len * result[prefix] = arr * trie_edge_to_map(node.root, result, prefix, include_zeros) # <<<<<<<<<<<<<< @@ -28413,7 +28408,7 @@ static PyObject *__pyx_f_3_sa_trie_node_to_map(struct __pyx_t_3_sa__Trie_Node *_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":102 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":102 * trie_edge_to_map(node.root, result, prefix, include_zeros) * * cdef trie_edge_to_map(_Trie_Edge* edge, result, prefix, int include_zeros): # <<<<<<<<<<<<<< @@ -28433,7 +28428,7 @@ static PyObject *__pyx_f_3_sa_trie_edge_to_map(struct __pyx_t_3_sa__Trie_Edge *_ __Pyx_RefNannySetupContext("trie_edge_to_map", 0); __Pyx_INCREF(__pyx_v_prefix); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":103 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":103 * * cdef trie_edge_to_map(_Trie_Edge* edge, result, prefix, int include_zeros): * if edge != NULL: # <<<<<<<<<<<<<< @@ -28443,7 +28438,7 @@ static PyObject *__pyx_f_3_sa_trie_edge_to_map(struct __pyx_t_3_sa__Trie_Edge *_ __pyx_t_1 = (__pyx_v_edge != NULL); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":104 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":104 * cdef trie_edge_to_map(_Trie_Edge* edge, result, prefix, int include_zeros): * if edge != NULL: * trie_edge_to_map(edge.smaller, result, prefix, include_zeros) # <<<<<<<<<<<<<< @@ -28454,7 +28449,7 @@ static PyObject *__pyx_f_3_sa_trie_edge_to_map(struct __pyx_t_3_sa__Trie_Edge *_ __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":105 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":105 * if edge != NULL: * trie_edge_to_map(edge.smaller, result, prefix, include_zeros) * trie_edge_to_map(edge.bigger, result, prefix, include_zeros) # <<<<<<<<<<<<<< @@ -28465,7 +28460,7 @@ static PyObject *__pyx_f_3_sa_trie_edge_to_map(struct __pyx_t_3_sa__Trie_Edge *_ __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":106 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":106 * trie_edge_to_map(edge.smaller, result, prefix, include_zeros) * trie_edge_to_map(edge.bigger, result, prefix, include_zeros) * prefix = prefix + (edge.val,) # <<<<<<<<<<<<<< @@ -28486,7 +28481,7 @@ static PyObject *__pyx_f_3_sa_trie_edge_to_map(struct __pyx_t_3_sa__Trie_Edge *_ __pyx_v_prefix = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":107 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":107 * trie_edge_to_map(edge.bigger, result, prefix, include_zeros) * prefix = prefix + (edge.val,) * trie_node_to_map(edge.node, result, prefix, include_zeros) # <<<<<<<<<<<<<< @@ -28561,7 +28556,7 @@ static int __pyx_pw_3_sa_7TrieMap_1__cinit__(PyObject *__pyx_v_self, PyObject *_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":114 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":114 * cdef int V * * def __cinit__(self, int alphabet_size): # <<<<<<<<<<<<<< @@ -28574,7 +28569,7 @@ static int __pyx_pf_3_sa_7TrieMap___cinit__(struct __pyx_obj_3_sa_TrieMap *__pyx __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":115 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":115 * * def __cinit__(self, int alphabet_size): * self.V = alphabet_size # <<<<<<<<<<<<<< @@ -28583,7 +28578,7 @@ static int __pyx_pf_3_sa_7TrieMap___cinit__(struct __pyx_obj_3_sa_TrieMap *__pyx */ __pyx_v_self->V = __pyx_v_alphabet_size; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":116 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":116 * def __cinit__(self, int alphabet_size): * self.V = alphabet_size * self.root = <_Trie_Node**> malloc(self.V * sizeof(_Trie_Node*)) # <<<<<<<<<<<<<< @@ -28592,7 +28587,7 @@ static int __pyx_pf_3_sa_7TrieMap___cinit__(struct __pyx_obj_3_sa_TrieMap *__pyx */ __pyx_v_self->root = ((struct __pyx_t_3_sa__Trie_Node **)malloc((__pyx_v_self->V * (sizeof(struct __pyx_t_3_sa__Trie_Node *))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":117 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":117 * self.V = alphabet_size * self.root = <_Trie_Node**> malloc(self.V * sizeof(_Trie_Node*)) * memset(self.root, 0, self.V * sizeof(_Trie_Node*)) # <<<<<<<<<<<<<< @@ -28615,7 +28610,7 @@ static void __pyx_pw_3_sa_7TrieMap_3__dealloc__(PyObject *__pyx_v_self) { __Pyx_RefNannyFinishContext(); } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":120 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":120 * * * def __dealloc__(self): # <<<<<<<<<<<<<< @@ -28634,7 +28629,7 @@ static void __pyx_pf_3_sa_7TrieMap_2__dealloc__(struct __pyx_obj_3_sa_TrieMap *_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__dealloc__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":122 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":122 * def __dealloc__(self): * cdef int i * for i from 0 <= i < self.V: # <<<<<<<<<<<<<< @@ -28644,7 +28639,7 @@ static void __pyx_pf_3_sa_7TrieMap_2__dealloc__(struct __pyx_obj_3_sa_TrieMap *_ __pyx_t_1 = __pyx_v_self->V; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_1; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":123 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":123 * cdef int i * for i from 0 <= i < self.V: * if self.root[i] != NULL: # <<<<<<<<<<<<<< @@ -28654,7 +28649,7 @@ static void __pyx_pf_3_sa_7TrieMap_2__dealloc__(struct __pyx_obj_3_sa_TrieMap *_ __pyx_t_2 = ((__pyx_v_self->root[__pyx_v_i]) != NULL); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":124 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":124 * for i from 0 <= i < self.V: * if self.root[i] != NULL: * free_trie_node(self.root[i]) # <<<<<<<<<<<<<< @@ -28669,7 +28664,7 @@ static void __pyx_pf_3_sa_7TrieMap_2__dealloc__(struct __pyx_obj_3_sa_TrieMap *_ __pyx_L5:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":125 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":125 * if self.root[i] != NULL: * free_trie_node(self.root[i]) * free(self.root) # <<<<<<<<<<<<<< @@ -28697,7 +28692,7 @@ static PyObject *__pyx_pw_3_sa_7TrieMap_5insert(PyObject *__pyx_v_self, PyObject return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":128 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":128 * * * def insert(self, pattern): # <<<<<<<<<<<<<< @@ -28720,7 +28715,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_4insert(struct __pyx_obj_3_sa_TrieMap *_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("insert", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":131 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":131 * cdef int* p * cdef int i, l * l = len(pattern) # <<<<<<<<<<<<<< @@ -28730,7 +28725,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_4insert(struct __pyx_obj_3_sa_TrieMap *_ __pyx_t_1 = PyObject_Length(__pyx_v_pattern); if (unlikely(__pyx_t_1 == -1)) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 131; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_l = __pyx_t_1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":132 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":132 * cdef int i, l * l = len(pattern) * p = <int*> malloc(l*sizeof(int)) # <<<<<<<<<<<<<< @@ -28739,7 +28734,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_4insert(struct __pyx_obj_3_sa_TrieMap *_ */ __pyx_v_p = ((int *)malloc((__pyx_v_l * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":133 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":133 * l = len(pattern) * p = <int*> malloc(l*sizeof(int)) * for i from 0 <= i < l: # <<<<<<<<<<<<<< @@ -28749,7 +28744,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_4insert(struct __pyx_obj_3_sa_TrieMap *_ __pyx_t_2 = __pyx_v_l; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_2; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":134 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":134 * p = <int*> malloc(l*sizeof(int)) * for i from 0 <= i < l: * p[i] = pattern[i] # <<<<<<<<<<<<<< @@ -28763,7 +28758,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_4insert(struct __pyx_obj_3_sa_TrieMap *_ (__pyx_v_p[__pyx_v_i]) = __pyx_t_4; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":135 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":135 * for i from 0 <= i < l: * p[i] = pattern[i] * self._insert(p,l) # <<<<<<<<<<<<<< @@ -28772,7 +28767,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_4insert(struct __pyx_obj_3_sa_TrieMap *_ */ ((struct __pyx_vtabstruct_3_sa_TrieMap *)__pyx_v_self->__pyx_vtab)->_insert(__pyx_v_self, __pyx_v_p, __pyx_v_l); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":136 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":136 * p[i] = pattern[i] * self._insert(p,l) * free(p) # <<<<<<<<<<<<<< @@ -28793,7 +28788,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_4insert(struct __pyx_obj_3_sa_TrieMap *_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":139 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":139 * * * cdef _Trie_Node* _insert(self, int* pattern, int pattern_len): # <<<<<<<<<<<<<< @@ -28810,7 +28805,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_7TrieMap__insert(struct __py int __pyx_t_2; __Pyx_RefNannySetupContext("_insert", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":142 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":142 * cdef int i * cdef _Trie_Node* node * if self.root[pattern[0]] == NULL: # <<<<<<<<<<<<<< @@ -28820,7 +28815,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_7TrieMap__insert(struct __py __pyx_t_1 = ((__pyx_v_self->root[(__pyx_v_pattern[0])]) == NULL); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":143 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":143 * cdef _Trie_Node* node * if self.root[pattern[0]] == NULL: * self.root[pattern[0]] = new_trie_node() # <<<<<<<<<<<<<< @@ -28832,7 +28827,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_7TrieMap__insert(struct __py } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":144 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":144 * if self.root[pattern[0]] == NULL: * self.root[pattern[0]] = new_trie_node() * node = self.root[pattern[0]] # <<<<<<<<<<<<<< @@ -28841,7 +28836,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_7TrieMap__insert(struct __py */ __pyx_v_node = (__pyx_v_self->root[(__pyx_v_pattern[0])]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":145 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":145 * self.root[pattern[0]] = new_trie_node() * node = self.root[pattern[0]] * for i from 1 <= i < pattern_len: # <<<<<<<<<<<<<< @@ -28851,7 +28846,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_7TrieMap__insert(struct __py __pyx_t_2 = __pyx_v_pattern_len; for (__pyx_v_i = 1; __pyx_v_i < __pyx_t_2; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":146 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":146 * node = self.root[pattern[0]] * for i from 1 <= i < pattern_len: * node = trie_insert(node, pattern[i]) # <<<<<<<<<<<<<< @@ -28861,7 +28856,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_7TrieMap__insert(struct __py __pyx_v_node = __pyx_f_3_sa_trie_insert(__pyx_v_node, (__pyx_v_pattern[__pyx_v_i])); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":147 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":147 * for i from 1 <= i < pattern_len: * node = trie_insert(node, pattern[i]) * return node # <<<<<<<<<<<<<< @@ -28888,7 +28883,7 @@ static PyObject *__pyx_pw_3_sa_7TrieMap_7contains(PyObject *__pyx_v_self, PyObje return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":149 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":149 * return node * * def contains(self, pattern): # <<<<<<<<<<<<<< @@ -28913,7 +28908,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_6contains(struct __pyx_obj_3_sa_TrieMap int __pyx_clineno = 0; __Pyx_RefNannySetupContext("contains", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":153 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":153 * cdef int i, l * cdef _Trie_Node* node * l = len(pattern) # <<<<<<<<<<<<<< @@ -28923,7 +28918,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_6contains(struct __pyx_obj_3_sa_TrieMap __pyx_t_1 = PyObject_Length(__pyx_v_pattern); if (unlikely(__pyx_t_1 == -1)) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 153; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_l = __pyx_t_1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":154 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":154 * cdef _Trie_Node* node * l = len(pattern) * p = <int*> malloc(l*sizeof(int)) # <<<<<<<<<<<<<< @@ -28932,7 +28927,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_6contains(struct __pyx_obj_3_sa_TrieMap */ __pyx_v_p = ((int *)malloc((__pyx_v_l * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":155 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":155 * l = len(pattern) * p = <int*> malloc(l*sizeof(int)) * for i from 0 <= i < l: # <<<<<<<<<<<<<< @@ -28942,7 +28937,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_6contains(struct __pyx_obj_3_sa_TrieMap __pyx_t_2 = __pyx_v_l; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_2; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":156 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":156 * p = <int*> malloc(l*sizeof(int)) * for i from 0 <= i < l: * p[i] = pattern[i] # <<<<<<<<<<<<<< @@ -28956,7 +28951,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_6contains(struct __pyx_obj_3_sa_TrieMap (__pyx_v_p[__pyx_v_i]) = __pyx_t_4; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":157 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":157 * for i from 0 <= i < l: * p[i] = pattern[i] * node = self._contains(p,l) # <<<<<<<<<<<<<< @@ -28965,7 +28960,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_6contains(struct __pyx_obj_3_sa_TrieMap */ __pyx_v_node = ((struct __pyx_vtabstruct_3_sa_TrieMap *)__pyx_v_self->__pyx_vtab)->_contains(__pyx_v_self, __pyx_v_p, __pyx_v_l); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":158 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":158 * p[i] = pattern[i] * node = self._contains(p,l) * free(p) # <<<<<<<<<<<<<< @@ -28974,7 +28969,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_6contains(struct __pyx_obj_3_sa_TrieMap */ free(__pyx_v_p); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":159 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":159 * node = self._contains(p,l) * free(p) * if node == NULL: # <<<<<<<<<<<<<< @@ -28984,7 +28979,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_6contains(struct __pyx_obj_3_sa_TrieMap __pyx_t_5 = (__pyx_v_node == NULL); if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":160 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":160 * free(p) * if node == NULL: * return False # <<<<<<<<<<<<<< @@ -29001,7 +28996,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_6contains(struct __pyx_obj_3_sa_TrieMap } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":162 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":162 * return False * else: * return True # <<<<<<<<<<<<<< @@ -29029,7 +29024,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_6contains(struct __pyx_obj_3_sa_TrieMap return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":164 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":164 * return True * * cdef _Trie_Node* _contains(self, int* pattern, int pattern_len): # <<<<<<<<<<<<<< @@ -29047,7 +29042,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_7TrieMap__contains(struct __ int __pyx_t_3; __Pyx_RefNannySetupContext("_contains", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":167 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":167 * cdef int i * cdef _Trie_Node* node * node = self.root[pattern[0]] # <<<<<<<<<<<<<< @@ -29056,7 +29051,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_7TrieMap__contains(struct __ */ __pyx_v_node = (__pyx_v_self->root[(__pyx_v_pattern[0])]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":168 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":168 * cdef _Trie_Node* node * node = self.root[pattern[0]] * i = 1 # <<<<<<<<<<<<<< @@ -29065,7 +29060,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_7TrieMap__contains(struct __ */ __pyx_v_i = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":169 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":169 * node = self.root[pattern[0]] * i = 1 * while node != NULL and i < pattern_len: # <<<<<<<<<<<<<< @@ -29082,7 +29077,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_7TrieMap__contains(struct __ } if (!__pyx_t_3) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":170 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":170 * i = 1 * while node != NULL and i < pattern_len: * node = trie_find(node, pattern[i]) # <<<<<<<<<<<<<< @@ -29091,7 +29086,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_7TrieMap__contains(struct __ */ __pyx_v_node = __pyx_f_3_sa_trie_find(__pyx_v_node, (__pyx_v_pattern[__pyx_v_i])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":171 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":171 * while node != NULL and i < pattern_len: * node = trie_find(node, pattern[i]) * i = i+1 # <<<<<<<<<<<<<< @@ -29101,7 +29096,7 @@ static struct __pyx_t_3_sa__Trie_Node *__pyx_f_3_sa_7TrieMap__contains(struct __ __pyx_v_i = (__pyx_v_i + 1); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":172 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":172 * node = trie_find(node, pattern[i]) * i = i+1 * return node # <<<<<<<<<<<<<< @@ -29128,7 +29123,7 @@ static PyObject *__pyx_pw_3_sa_7TrieMap_9toMap(PyObject *__pyx_v_self, PyObject return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":174 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":174 * return node * * def toMap(self, flag): # <<<<<<<<<<<<<< @@ -29151,7 +29146,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_8toMap(struct __pyx_obj_3_sa_TrieMap *__ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("toMap", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":177 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":177 * cdef int i, include_zeros * * if flag: # <<<<<<<<<<<<<< @@ -29161,7 +29156,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_8toMap(struct __pyx_obj_3_sa_TrieMap *__ __pyx_t_1 = __Pyx_PyObject_IsTrue(__pyx_v_flag); if (unlikely(__pyx_t_1 < 0)) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 177; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":178 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":178 * * if flag: * include_zeros=1 # <<<<<<<<<<<<<< @@ -29173,7 +29168,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_8toMap(struct __pyx_obj_3_sa_TrieMap *__ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":180 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":180 * include_zeros=1 * else: * include_zeros=0 # <<<<<<<<<<<<<< @@ -29184,7 +29179,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_8toMap(struct __pyx_obj_3_sa_TrieMap *__ } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":181 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":181 * else: * include_zeros=0 * result = {} # <<<<<<<<<<<<<< @@ -29196,7 +29191,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_8toMap(struct __pyx_obj_3_sa_TrieMap *__ __pyx_v_result = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":182 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":182 * include_zeros=0 * result = {} * for i from 0 <= i < self.V: # <<<<<<<<<<<<<< @@ -29206,7 +29201,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_8toMap(struct __pyx_obj_3_sa_TrieMap *__ __pyx_t_3 = __pyx_v_self->V; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_3; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":183 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":183 * result = {} * for i from 0 <= i < self.V: * if self.root[i] != NULL: # <<<<<<<<<<<<<< @@ -29216,7 +29211,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_8toMap(struct __pyx_obj_3_sa_TrieMap *__ __pyx_t_1 = ((__pyx_v_self->root[__pyx_v_i]) != NULL); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":184 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":184 * for i from 0 <= i < self.V: * if self.root[i] != NULL: * trie_node_to_map(self.root[i], result, (i,), include_zeros) # <<<<<<<<<<<<<< @@ -29239,7 +29234,7 @@ static PyObject *__pyx_pf_3_sa_7TrieMap_8toMap(struct __pyx_obj_3_sa_TrieMap *__ __pyx_L6:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":185 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":185 * if self.root[i] != NULL: * trie_node_to_map(self.root[i], result, (i,), include_zeros) * return result # <<<<<<<<<<<<<< @@ -29284,7 +29279,7 @@ static int __pyx_pw_3_sa_14Precomputation_1__cinit__(PyObject *__pyx_v_self, PyO static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__fsarray,&__pyx_n_s__from_stats,&__pyx_n_s__from_binary,&__pyx_n_s__precompute_rank,&__pyx_n_s_70,&__pyx_n_s__max_length,&__pyx_n_s__max_nonterminals,&__pyx_n_s_71,&__pyx_n_s__train_min_gap_size,0}; PyObject* values[9] = {0,0,0,0,0,0,0,0,0}; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":200 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":200 * cdef write_map(self, m, FILE* f) * * def __cinit__(self, fsarray=None, from_stats=None, from_binary=None, # <<<<<<<<<<<<<< @@ -29418,7 +29413,7 @@ static int __pyx_pf_3_sa_14Precomputation___cinit__(struct __pyx_obj_3_sa_Precom int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":204 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":204 * max_length=5, max_nonterminals=2, * train_max_initial_size=10, train_min_gap_size=2): * self.precompute_rank = precompute_rank # <<<<<<<<<<<<<< @@ -29428,7 +29423,7 @@ static int __pyx_pf_3_sa_14Precomputation___cinit__(struct __pyx_obj_3_sa_Precom __pyx_t_1 = __Pyx_PyInt_AsInt(__pyx_v_precompute_rank); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 204; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_self->precompute_rank = __pyx_t_1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":205 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":205 * train_max_initial_size=10, train_min_gap_size=2): * self.precompute_rank = precompute_rank * self.precompute_secondary_rank = precompute_secondary_rank # <<<<<<<<<<<<<< @@ -29438,7 +29433,7 @@ static int __pyx_pf_3_sa_14Precomputation___cinit__(struct __pyx_obj_3_sa_Precom __pyx_t_1 = __Pyx_PyInt_AsInt(__pyx_v_precompute_secondary_rank); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_self->precompute_secondary_rank = __pyx_t_1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":206 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":206 * self.precompute_rank = precompute_rank * self.precompute_secondary_rank = precompute_secondary_rank * self.max_length = max_length # <<<<<<<<<<<<<< @@ -29448,7 +29443,7 @@ static int __pyx_pf_3_sa_14Precomputation___cinit__(struct __pyx_obj_3_sa_Precom __pyx_t_1 = __Pyx_PyInt_AsInt(__pyx_v_max_length); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 206; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_self->max_length = __pyx_t_1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":207 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":207 * self.precompute_secondary_rank = precompute_secondary_rank * self.max_length = max_length * self.max_nonterminals = max_nonterminals # <<<<<<<<<<<<<< @@ -29458,7 +29453,7 @@ static int __pyx_pf_3_sa_14Precomputation___cinit__(struct __pyx_obj_3_sa_Precom __pyx_t_1 = __Pyx_PyInt_AsInt(__pyx_v_max_nonterminals); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 207; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_self->max_nonterminals = __pyx_t_1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":208 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":208 * self.max_length = max_length * self.max_nonterminals = max_nonterminals * self.train_max_initial_size = train_max_initial_size # <<<<<<<<<<<<<< @@ -29468,7 +29463,7 @@ static int __pyx_pf_3_sa_14Precomputation___cinit__(struct __pyx_obj_3_sa_Precom __pyx_t_1 = __Pyx_PyInt_AsInt(__pyx_v_train_max_initial_size); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 208; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_self->train_max_initial_size = __pyx_t_1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":209 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":209 * self.max_nonterminals = max_nonterminals * self.train_max_initial_size = train_max_initial_size * self.train_min_gap_size = train_min_gap_size # <<<<<<<<<<<<<< @@ -29478,7 +29473,7 @@ static int __pyx_pf_3_sa_14Precomputation___cinit__(struct __pyx_obj_3_sa_Precom __pyx_t_1 = __Pyx_PyInt_AsInt(__pyx_v_train_min_gap_size); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 209; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_self->train_min_gap_size = __pyx_t_1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":210 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":210 * self.train_max_initial_size = train_max_initial_size * self.train_min_gap_size = train_min_gap_size * if from_binary: # <<<<<<<<<<<<<< @@ -29488,7 +29483,7 @@ static int __pyx_pf_3_sa_14Precomputation___cinit__(struct __pyx_obj_3_sa_Precom __pyx_t_2 = __Pyx_PyObject_IsTrue(__pyx_v_from_binary); if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 210; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":211 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":211 * self.train_min_gap_size = train_min_gap_size * if from_binary: * self.read_binary(from_binary) # <<<<<<<<<<<<<< @@ -29510,7 +29505,7 @@ static int __pyx_pf_3_sa_14Precomputation___cinit__(struct __pyx_obj_3_sa_Precom goto __pyx_L3; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":212 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":212 * if from_binary: * self.read_binary(from_binary) * elif from_stats: # <<<<<<<<<<<<<< @@ -29520,7 +29515,7 @@ static int __pyx_pf_3_sa_14Precomputation___cinit__(struct __pyx_obj_3_sa_Precom __pyx_t_2 = __Pyx_PyObject_IsTrue(__pyx_v_from_stats); if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 212; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":213 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":213 * self.read_binary(from_binary) * elif from_stats: * self.precompute(from_stats, fsarray) # <<<<<<<<<<<<<< @@ -29580,7 +29575,7 @@ static PyObject *__pyx_pw_3_sa_14Precomputation_3read_binary(PyObject *__pyx_v_s return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":216 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":216 * * * def read_binary(self, char* filename): # <<<<<<<<<<<<<< @@ -29598,7 +29593,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_2read_binary(struct __pyx_obj_3_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("read_binary", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":218 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":218 * def read_binary(self, char* filename): * cdef FILE* f * f = fopen(filename, "r") # <<<<<<<<<<<<<< @@ -29607,7 +29602,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_2read_binary(struct __pyx_obj_3_ */ __pyx_v_f = fopen(__pyx_v_filename, __pyx_k__r); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":219 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":219 * cdef FILE* f * f = fopen(filename, "r") * fread(&(self.precompute_rank), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -29616,7 +29611,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_2read_binary(struct __pyx_obj_3_ */ fread((&__pyx_v_self->precompute_rank), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":220 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":220 * f = fopen(filename, "r") * fread(&(self.precompute_rank), sizeof(int), 1, f) * fread(&(self.precompute_secondary_rank), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -29625,7 +29620,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_2read_binary(struct __pyx_obj_3_ */ fread((&__pyx_v_self->precompute_secondary_rank), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":221 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":221 * fread(&(self.precompute_rank), sizeof(int), 1, f) * fread(&(self.precompute_secondary_rank), sizeof(int), 1, f) * fread(&(self.max_length), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -29634,7 +29629,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_2read_binary(struct __pyx_obj_3_ */ fread((&__pyx_v_self->max_length), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":222 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":222 * fread(&(self.precompute_secondary_rank), sizeof(int), 1, f) * fread(&(self.max_length), sizeof(int), 1, f) * fread(&(self.max_nonterminals), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -29643,7 +29638,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_2read_binary(struct __pyx_obj_3_ */ fread((&__pyx_v_self->max_nonterminals), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":223 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":223 * fread(&(self.max_length), sizeof(int), 1, f) * fread(&(self.max_nonterminals), sizeof(int), 1, f) * fread(&(self.train_max_initial_size), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -29652,7 +29647,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_2read_binary(struct __pyx_obj_3_ */ fread((&__pyx_v_self->train_max_initial_size), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":224 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":224 * fread(&(self.max_nonterminals), sizeof(int), 1, f) * fread(&(self.train_max_initial_size), sizeof(int), 1, f) * fread(&(self.train_min_gap_size), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -29661,7 +29656,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_2read_binary(struct __pyx_obj_3_ */ fread((&__pyx_v_self->train_min_gap_size), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":225 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":225 * fread(&(self.train_max_initial_size), sizeof(int), 1, f) * fread(&(self.train_min_gap_size), sizeof(int), 1, f) * self.precomputed_index = self.read_map(f) # <<<<<<<<<<<<<< @@ -29676,7 +29671,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_2read_binary(struct __pyx_obj_3_ __pyx_v_self->precomputed_index = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":226 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":226 * fread(&(self.train_min_gap_size), sizeof(int), 1, f) * self.precomputed_index = self.read_map(f) * self.precomputed_collocations = self.read_map(f) # <<<<<<<<<<<<<< @@ -29691,7 +29686,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_2read_binary(struct __pyx_obj_3_ __pyx_v_self->precomputed_collocations = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":227 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":227 * self.precomputed_index = self.read_map(f) * self.precomputed_collocations = self.read_map(f) * fclose(f) # <<<<<<<<<<<<<< @@ -29733,7 +29728,7 @@ static PyObject *__pyx_pw_3_sa_14Precomputation_5write_binary(PyObject *__pyx_v_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":230 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":230 * * * def write_binary(self, char* filename): # <<<<<<<<<<<<<< @@ -29752,7 +29747,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_4write_binary(struct __pyx_obj_3 int __pyx_clineno = 0; __Pyx_RefNannySetupContext("write_binary", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":232 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":232 * def write_binary(self, char* filename): * cdef FILE* f * f = fopen(filename, "w") # <<<<<<<<<<<<<< @@ -29761,7 +29756,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_4write_binary(struct __pyx_obj_3 */ __pyx_v_f = fopen(__pyx_v_filename, __pyx_k__w); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":233 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":233 * cdef FILE* f * f = fopen(filename, "w") * fwrite(&(self.precompute_rank), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -29770,7 +29765,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_4write_binary(struct __pyx_obj_3 */ fwrite((&__pyx_v_self->precompute_rank), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":234 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":234 * f = fopen(filename, "w") * fwrite(&(self.precompute_rank), sizeof(int), 1, f) * fwrite(&(self.precompute_secondary_rank), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -29779,7 +29774,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_4write_binary(struct __pyx_obj_3 */ fwrite((&__pyx_v_self->precompute_secondary_rank), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":235 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":235 * fwrite(&(self.precompute_rank), sizeof(int), 1, f) * fwrite(&(self.precompute_secondary_rank), sizeof(int), 1, f) * fwrite(&(self.max_length), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -29788,7 +29783,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_4write_binary(struct __pyx_obj_3 */ fwrite((&__pyx_v_self->max_length), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":236 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":236 * fwrite(&(self.precompute_secondary_rank), sizeof(int), 1, f) * fwrite(&(self.max_length), sizeof(int), 1, f) * fwrite(&(self.max_nonterminals), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -29797,7 +29792,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_4write_binary(struct __pyx_obj_3 */ fwrite((&__pyx_v_self->max_nonterminals), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":237 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":237 * fwrite(&(self.max_length), sizeof(int), 1, f) * fwrite(&(self.max_nonterminals), sizeof(int), 1, f) * fwrite(&(self.train_max_initial_size), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -29806,7 +29801,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_4write_binary(struct __pyx_obj_3 */ fwrite((&__pyx_v_self->train_max_initial_size), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":238 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":238 * fwrite(&(self.max_nonterminals), sizeof(int), 1, f) * fwrite(&(self.train_max_initial_size), sizeof(int), 1, f) * fwrite(&(self.train_min_gap_size), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -29815,7 +29810,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_4write_binary(struct __pyx_obj_3 */ fwrite((&__pyx_v_self->train_min_gap_size), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":239 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":239 * fwrite(&(self.train_max_initial_size), sizeof(int), 1, f) * fwrite(&(self.train_min_gap_size), sizeof(int), 1, f) * self.write_map(self.precomputed_index, f) # <<<<<<<<<<<<<< @@ -29829,7 +29824,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_4write_binary(struct __pyx_obj_3 __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":240 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":240 * fwrite(&(self.train_min_gap_size), sizeof(int), 1, f) * self.write_map(self.precomputed_index, f) * self.write_map(self.precomputed_collocations, f) # <<<<<<<<<<<<<< @@ -29843,7 +29838,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_4write_binary(struct __pyx_obj_3 __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":241 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":241 * self.write_map(self.precomputed_index, f) * self.write_map(self.precomputed_collocations, f) * fclose(f) # <<<<<<<<<<<<<< @@ -29865,7 +29860,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_4write_binary(struct __pyx_obj_3 return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":244 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":244 * * * cdef write_map(self, m, FILE* f): # <<<<<<<<<<<<<< @@ -29896,7 +29891,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_write_map(CYTHON_UNUSED struct __ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("write_map", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":248 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":248 * cdef IntList arr * * N = len(m) # <<<<<<<<<<<<<< @@ -29906,7 +29901,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_write_map(CYTHON_UNUSED struct __ __pyx_t_1 = PyObject_Length(__pyx_v_m); if (unlikely(__pyx_t_1 == -1)) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 248; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_N = __pyx_t_1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":249 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":249 * * N = len(m) * fwrite(&(N), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -29915,7 +29910,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_write_map(CYTHON_UNUSED struct __ */ fwrite((&__pyx_v_N), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":250 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":250 * N = len(m) * fwrite(&(N), sizeof(int), 1, f) * for pattern, val in m.iteritems(): # <<<<<<<<<<<<<< @@ -29945,7 +29940,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_write_map(CYTHON_UNUSED struct __ __pyx_v_val = __pyx_t_6; __pyx_t_6 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":251 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":251 * fwrite(&(N), sizeof(int), 1, f) * for pattern, val in m.iteritems(): * N = len(pattern) # <<<<<<<<<<<<<< @@ -29955,7 +29950,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_write_map(CYTHON_UNUSED struct __ __pyx_t_8 = PyObject_Length(__pyx_v_pattern); if (unlikely(__pyx_t_8 == -1)) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 251; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_N = __pyx_t_8; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":252 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":252 * for pattern, val in m.iteritems(): * N = len(pattern) * fwrite(&(N), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -29964,7 +29959,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_write_map(CYTHON_UNUSED struct __ */ fwrite((&__pyx_v_N), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":253 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":253 * N = len(pattern) * fwrite(&(N), sizeof(int), 1, f) * for word_id in pattern: # <<<<<<<<<<<<<< @@ -30009,7 +30004,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_write_map(CYTHON_UNUSED struct __ __pyx_v_word_id = __pyx_t_5; __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":254 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":254 * fwrite(&(N), sizeof(int), 1, f) * for word_id in pattern: * i = word_id # <<<<<<<<<<<<<< @@ -30019,7 +30014,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_write_map(CYTHON_UNUSED struct __ __pyx_t_7 = __Pyx_PyInt_AsInt(__pyx_v_word_id); if (unlikely((__pyx_t_7 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 254; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_i = __pyx_t_7; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":255 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":255 * for word_id in pattern: * i = word_id * fwrite(&(i), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -30030,7 +30025,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_write_map(CYTHON_UNUSED struct __ } __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":256 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":256 * i = word_id * fwrite(&(i), sizeof(int), 1, f) * arr = val # <<<<<<<<<<<<<< @@ -30042,7 +30037,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_write_map(CYTHON_UNUSED struct __ __Pyx_XDECREF(((PyObject *)__pyx_v_arr)); __pyx_v_arr = ((struct __pyx_obj_3_sa_IntList *)__pyx_v_val); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":257 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":257 * fwrite(&(i), sizeof(int), 1, f) * arr = val * arr.write_handle(f) # <<<<<<<<<<<<<< @@ -30071,7 +30066,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_write_map(CYTHON_UNUSED struct __ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":260 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":260 * * * cdef read_map(self, FILE* f): # <<<<<<<<<<<<<< @@ -30099,7 +30094,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_read_map(CYTHON_UNUSED struct __p int __pyx_clineno = 0; __Pyx_RefNannySetupContext("read_map", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":264 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":264 * cdef IntList arr * * m = {} # <<<<<<<<<<<<<< @@ -30111,7 +30106,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_read_map(CYTHON_UNUSED struct __p __pyx_v_m = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":265 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":265 * * m = {} * fread(&(N), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -30120,7 +30115,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_read_map(CYTHON_UNUSED struct __p */ fread((&__pyx_v_N), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":266 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":266 * m = {} * fread(&(N), sizeof(int), 1, f) * for j from 0 <= j < N: # <<<<<<<<<<<<<< @@ -30130,7 +30125,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_read_map(CYTHON_UNUSED struct __p __pyx_t_2 = __pyx_v_N; for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_2; __pyx_v_j++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":267 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":267 * fread(&(N), sizeof(int), 1, f) * for j from 0 <= j < N: * fread(&(i), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -30139,7 +30134,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_read_map(CYTHON_UNUSED struct __p */ fread((&__pyx_v_i), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":268 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":268 * for j from 0 <= j < N: * fread(&(i), sizeof(int), 1, f) * key = () # <<<<<<<<<<<<<< @@ -30150,7 +30145,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_read_map(CYTHON_UNUSED struct __p __Pyx_XDECREF(((PyObject *)__pyx_v_key)); __pyx_v_key = __pyx_empty_tuple; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":269 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":269 * fread(&(i), sizeof(int), 1, f) * key = () * for k from 0 <= k < i: # <<<<<<<<<<<<<< @@ -30160,7 +30155,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_read_map(CYTHON_UNUSED struct __p __pyx_t_3 = __pyx_v_i; for (__pyx_v_k = 0; __pyx_v_k < __pyx_t_3; __pyx_v_k++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":270 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":270 * key = () * for k from 0 <= k < i: * fread(&(word_id), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -30169,7 +30164,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_read_map(CYTHON_UNUSED struct __p */ fread((&__pyx_v_word_id), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":271 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":271 * for k from 0 <= k < i: * fread(&(word_id), sizeof(int), 1, f) * key = key + (word_id,) # <<<<<<<<<<<<<< @@ -30191,7 +30186,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_read_map(CYTHON_UNUSED struct __p __pyx_t_1 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":272 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":272 * fread(&(word_id), sizeof(int), 1, f) * key = key + (word_id,) * arr = IntList() # <<<<<<<<<<<<<< @@ -30204,7 +30199,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_read_map(CYTHON_UNUSED struct __p __pyx_v_arr = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":273 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":273 * key = key + (word_id,) * arr = IntList() * arr.read_handle(f) # <<<<<<<<<<<<<< @@ -30213,7 +30208,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_read_map(CYTHON_UNUSED struct __p */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_arr->__pyx_vtab)->read_handle(__pyx_v_arr, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":274 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":274 * arr = IntList() * arr.read_handle(f) * m[key] = arr # <<<<<<<<<<<<<< @@ -30223,7 +30218,7 @@ static PyObject *__pyx_f_3_sa_14Precomputation_read_map(CYTHON_UNUSED struct __p if (PyDict_SetItem(((PyObject *)__pyx_v_m), ((PyObject *)__pyx_v_key), ((PyObject *)__pyx_v_arr)) < 0) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 274; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":275 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":275 * arr.read_handle(f) * m[key] = arr * return m # <<<<<<<<<<<<<< @@ -30312,7 +30307,7 @@ static PyObject *__pyx_pw_3_sa_14Precomputation_7precompute(PyObject *__pyx_v_se return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":278 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":278 * * * def precompute(self, stats, SuffixArray sarray): # <<<<<<<<<<<<<< @@ -30397,7 +30392,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s int __pyx_clineno = 0; __Pyx_RefNannySetupContext("precompute", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":280 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":280 * def precompute(self, stats, SuffixArray sarray): * cdef int i, l, N, max_pattern_len, i1, l1, i2, l2, i3, l3, ptr1, ptr2, ptr3, is_super, sent_count, max_rank * cdef DataArray darray = sarray.darray # <<<<<<<<<<<<<< @@ -30407,7 +30402,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_INCREF(((PyObject *)__pyx_v_sarray->darray)); __pyx_v_darray = __pyx_v_sarray->darray; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":285 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":285 * cdef _Trie_Node* node * * data = darray.data # <<<<<<<<<<<<<< @@ -30417,7 +30412,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_INCREF(((PyObject *)__pyx_v_darray->data)); __pyx_v_data = __pyx_v_darray->data; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":287 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":287 * data = darray.data * * frequent_patterns = TrieMap(len(darray.id2word)) # <<<<<<<<<<<<<< @@ -30441,7 +30436,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_frequent_patterns = ((struct __pyx_obj_3_sa_TrieMap *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":288 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":288 * * frequent_patterns = TrieMap(len(darray.id2word)) * super_frequent_patterns = TrieMap(len(darray.id2word)) # <<<<<<<<<<<<<< @@ -30465,7 +30460,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_super_frequent_patterns = ((struct __pyx_obj_3_sa_TrieMap *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":289 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":289 * frequent_patterns = TrieMap(len(darray.id2word)) * super_frequent_patterns = TrieMap(len(darray.id2word)) * collocations = TrieMap(len(darray.id2word)) # <<<<<<<<<<<<<< @@ -30489,7 +30484,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_collocations = ((struct __pyx_obj_3_sa_TrieMap *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":291 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":291 * collocations = TrieMap(len(darray.id2word)) * * I_set = set() # <<<<<<<<<<<<<< @@ -30501,7 +30496,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_I_set = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":292 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":292 * * I_set = set() * J_set = set() # <<<<<<<<<<<<<< @@ -30513,7 +30508,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_J_set = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":293 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":293 * I_set = set() * J_set = set() * J2_set = set() # <<<<<<<<<<<<<< @@ -30525,7 +30520,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_J2_set = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":294 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":294 * J_set = set() * J2_set = set() * IJ_set = set() # <<<<<<<<<<<<<< @@ -30537,7 +30532,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_IJ_set = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":295 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":295 * J2_set = set() * IJ_set = set() * pattern_rank = {} # <<<<<<<<<<<<<< @@ -30549,7 +30544,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_pattern_rank = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":297 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":297 * pattern_rank = {} * * logger.info("Precomputing frequent intersections") # <<<<<<<<<<<<<< @@ -30566,7 +30561,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":298 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":298 * * logger.info("Precomputing frequent intersections") * cdef float start_time = monitor_cpu() # <<<<<<<<<<<<<< @@ -30575,7 +30570,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_start_time = __pyx_f_3_sa_monitor_cpu(); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":300 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":300 * cdef float start_time = monitor_cpu() * * max_pattern_len = 0 # <<<<<<<<<<<<<< @@ -30584,7 +30579,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_max_pattern_len = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":301 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":301 * * max_pattern_len = 0 * for rank, (_, _, phrase) in enumerate(stats): # <<<<<<<<<<<<<< @@ -30700,7 +30695,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_1 = __pyx_t_5; __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":302 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":302 * max_pattern_len = 0 * for rank, (_, _, phrase) in enumerate(stats): * if rank >= self.precompute_rank: # <<<<<<<<<<<<<< @@ -30715,7 +30710,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0; if (__pyx_t_11) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":303 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":303 * for rank, (_, _, phrase) in enumerate(stats): * if rank >= self.precompute_rank: * break # <<<<<<<<<<<<<< @@ -30727,7 +30722,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __pyx_L7:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":304 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":304 * if rank >= self.precompute_rank: * break * max_pattern_len = max(max_pattern_len, len(phrase)) # <<<<<<<<<<<<<< @@ -30743,7 +30738,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __pyx_v_max_pattern_len = __pyx_t_14; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":305 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":305 * break * max_pattern_len = max(max_pattern_len, len(phrase)) * frequent_patterns.insert(phrase) # <<<<<<<<<<<<<< @@ -30763,7 +30758,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_DECREF(((PyObject *)__pyx_t_5)); __pyx_t_5 = 0; __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":306 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":306 * max_pattern_len = max(max_pattern_len, len(phrase)) * frequent_patterns.insert(phrase) * I_set.add(phrase) # <<<<<<<<<<<<<< @@ -30772,7 +30767,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_t_15 = PySet_Add(__pyx_v_I_set, __pyx_v_phrase); if (unlikely(__pyx_t_15 == -1)) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 306; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":307 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":307 * frequent_patterns.insert(phrase) * I_set.add(phrase) * pattern_rank[phrase] = rank # <<<<<<<<<<<<<< @@ -30781,7 +30776,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ if (PyDict_SetItem(((PyObject *)__pyx_v_pattern_rank), __pyx_v_phrase, __pyx_v_rank) < 0) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 307; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":308 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":308 * I_set.add(phrase) * pattern_rank[phrase] = rank * if rank < self.precompute_secondary_rank: # <<<<<<<<<<<<<< @@ -30796,7 +30791,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; if (__pyx_t_11) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":309 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":309 * pattern_rank[phrase] = rank * if rank < self.precompute_secondary_rank: * super_frequent_patterns.insert(phrase) # <<<<<<<<<<<<<< @@ -30816,7 +30811,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_DECREF(((PyObject *)__pyx_t_7)); __pyx_t_7 = 0; __Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":310 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":310 * if rank < self.precompute_secondary_rank: * super_frequent_patterns.insert(phrase) * J_set.add(phrase) # <<<<<<<<<<<<<< @@ -30832,7 +30827,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":312 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":312 * J_set.add(phrase) * * queue = IntList(increment=1000) # <<<<<<<<<<<<<< @@ -30848,7 +30843,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_queue = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":314 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":314 * queue = IntList(increment=1000) * * logger.info(" Computing inverted indexes...") # <<<<<<<<<<<<<< @@ -30865,7 +30860,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":315 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":315 * * logger.info(" Computing inverted indexes...") * N = len(data) # <<<<<<<<<<<<<< @@ -30875,7 +30870,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_2 = PyObject_Length(((PyObject *)__pyx_v_data)); if (unlikely(__pyx_t_2 == -1)) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 315; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_N = __pyx_t_2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":316 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":316 * logger.info(" Computing inverted indexes...") * N = len(data) * for i from 0 <= i < N: # <<<<<<<<<<<<<< @@ -30885,7 +30880,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_13 = __pyx_v_N; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_13; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":317 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":317 * N = len(data) * for i from 0 <= i < N: * sa_word_id = data.arr[i] # <<<<<<<<<<<<<< @@ -30894,7 +30889,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_sa_word_id = (__pyx_v_data->arr[__pyx_v_i]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":318 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":318 * for i from 0 <= i < N: * sa_word_id = data.arr[i] * if sa_word_id == 1: # <<<<<<<<<<<<<< @@ -30904,7 +30899,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_11 = (__pyx_v_sa_word_id == 1); if (__pyx_t_11) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":319 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":319 * sa_word_id = data.arr[i] * if sa_word_id == 1: * queue._append(-1) # <<<<<<<<<<<<<< @@ -30916,7 +30911,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":321 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":321 * queue._append(-1) * else: * for l from 1 <= l <= max_pattern_len: # <<<<<<<<<<<<<< @@ -30926,7 +30921,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_16 = __pyx_v_max_pattern_len; for (__pyx_v_l = 1; __pyx_v_l <= __pyx_t_16; __pyx_v_l++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":322 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":322 * else: * for l from 1 <= l <= max_pattern_len: * node = frequent_patterns._contains(data.arr+i, l) # <<<<<<<<<<<<<< @@ -30935,7 +30930,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_node = ((struct __pyx_vtabstruct_3_sa_TrieMap *)__pyx_v_frequent_patterns->__pyx_vtab)->_contains(__pyx_v_frequent_patterns, (__pyx_v_data->arr + __pyx_v_i), __pyx_v_l); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":323 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":323 * for l from 1 <= l <= max_pattern_len: * node = frequent_patterns._contains(data.arr+i, l) * if node == NULL: # <<<<<<<<<<<<<< @@ -30945,7 +30940,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_11 = (__pyx_v_node == NULL); if (__pyx_t_11) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":324 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":324 * node = frequent_patterns._contains(data.arr+i, l) * if node == NULL: * break # <<<<<<<<<<<<<< @@ -30957,7 +30952,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __pyx_L14:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":325 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":325 * if node == NULL: * break * queue._append(i) # <<<<<<<<<<<<<< @@ -30966,7 +30961,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_queue->__pyx_vtab)->_append(__pyx_v_queue, __pyx_v_i); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":326 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":326 * break * queue._append(i) * queue._append(l) # <<<<<<<<<<<<<< @@ -30975,7 +30970,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_queue->__pyx_vtab)->_append(__pyx_v_queue, __pyx_v_l); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":327 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":327 * queue._append(i) * queue._append(l) * trie_node_data_append(node, i) # <<<<<<<<<<<<<< @@ -30991,7 +30986,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_L11:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":329 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":329 * trie_node_data_append(node, i) * * logger.info(" Computing collocations...") # <<<<<<<<<<<<<< @@ -31008,7 +31003,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":330 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":330 * * logger.info(" Computing collocations...") * N = len(queue) # <<<<<<<<<<<<<< @@ -31018,7 +31013,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_2 = PyObject_Length(((PyObject *)__pyx_v_queue)); if (unlikely(__pyx_t_2 == -1)) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 330; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_N = __pyx_t_2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":331 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":331 * logger.info(" Computing collocations...") * N = len(queue) * ptr1 = 0 # <<<<<<<<<<<<<< @@ -31027,7 +31022,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_ptr1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":332 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":332 * N = len(queue) * ptr1 = 0 * sent_count = 0 # <<<<<<<<<<<<<< @@ -31036,7 +31031,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_sent_count = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":333 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":333 * ptr1 = 0 * sent_count = 0 * while ptr1 < N: # main loop # <<<<<<<<<<<<<< @@ -31047,7 +31042,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_11 = (__pyx_v_ptr1 < __pyx_v_N); if (!__pyx_t_11) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":334 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":334 * sent_count = 0 * while ptr1 < N: # main loop * i1 = queue.arr[ptr1] # <<<<<<<<<<<<<< @@ -31056,7 +31051,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_i1 = (__pyx_v_queue->arr[__pyx_v_ptr1]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":335 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":335 * while ptr1 < N: # main loop * i1 = queue.arr[ptr1] * if i1 > -1: # <<<<<<<<<<<<<< @@ -31066,7 +31061,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_11 = (__pyx_v_i1 > -1); if (__pyx_t_11) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":336 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":336 * i1 = queue.arr[ptr1] * if i1 > -1: * l1 = queue.arr[ptr1+1] # <<<<<<<<<<<<<< @@ -31075,7 +31070,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_l1 = (__pyx_v_queue->arr[(__pyx_v_ptr1 + 1)]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":337 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":337 * if i1 > -1: * l1 = queue.arr[ptr1+1] * ptr2 = ptr1 + 2 # <<<<<<<<<<<<<< @@ -31084,7 +31079,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_ptr2 = (__pyx_v_ptr1 + 2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":338 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":338 * l1 = queue.arr[ptr1+1] * ptr2 = ptr1 + 2 * while ptr2 < N: # <<<<<<<<<<<<<< @@ -31095,7 +31090,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_11 = (__pyx_v_ptr2 < __pyx_v_N); if (!__pyx_t_11) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":339 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":339 * ptr2 = ptr1 + 2 * while ptr2 < N: * i2 = queue.arr[ptr2] # <<<<<<<<<<<<<< @@ -31104,7 +31099,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_i2 = (__pyx_v_queue->arr[__pyx_v_ptr2]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":340 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":340 * while ptr2 < N: * i2 = queue.arr[ptr2] * if i2 == -1 or i2 - i1 >= self.train_max_initial_size: # <<<<<<<<<<<<<< @@ -31120,7 +31115,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } if (__pyx_t_18) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":341 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":341 * i2 = queue.arr[ptr2] * if i2 == -1 or i2 - i1 >= self.train_max_initial_size: * break # <<<<<<<<<<<<<< @@ -31132,7 +31127,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __pyx_L20:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":342 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":342 * if i2 == -1 or i2 - i1 >= self.train_max_initial_size: * break * l2 = queue.arr[ptr2+1] # <<<<<<<<<<<<<< @@ -31141,7 +31136,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_l2 = (__pyx_v_queue->arr[(__pyx_v_ptr2 + 1)]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":343 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":343 * break * l2 = queue.arr[ptr2+1] * if (i2 - i1 - l1 >= self.train_min_gap_size and # <<<<<<<<<<<<<< @@ -31151,7 +31146,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_18 = (((__pyx_v_i2 - __pyx_v_i1) - __pyx_v_l1) >= __pyx_v_self->train_min_gap_size); if (__pyx_t_18) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":344 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":344 * l2 = queue.arr[ptr2+1] * if (i2 - i1 - l1 >= self.train_min_gap_size and * i2 + l2 - i1 <= self.train_max_initial_size and # <<<<<<<<<<<<<< @@ -31161,7 +31156,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_11 = (((__pyx_v_i2 + __pyx_v_l2) - __pyx_v_i1) <= __pyx_v_self->train_max_initial_size); if (__pyx_t_11) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":345 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":345 * if (i2 - i1 - l1 >= self.train_min_gap_size and * i2 + l2 - i1 <= self.train_max_initial_size and * l1+l2+1 <= self.max_length): # <<<<<<<<<<<<<< @@ -31179,7 +31174,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } if (__pyx_t_11) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":346 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":346 * i2 + l2 - i1 <= self.train_max_initial_size and * l1+l2+1 <= self.max_length): * node = collocations._insert(data.arr+i1, l1) # <<<<<<<<<<<<<< @@ -31188,7 +31183,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_node = ((struct __pyx_vtabstruct_3_sa_TrieMap *)__pyx_v_collocations->__pyx_vtab)->_insert(__pyx_v_collocations, (__pyx_v_data->arr + __pyx_v_i1), __pyx_v_l1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":347 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":347 * l1+l2+1 <= self.max_length): * node = collocations._insert(data.arr+i1, l1) * node = trie_insert(node, -1) # <<<<<<<<<<<<<< @@ -31197,7 +31192,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_node = __pyx_f_3_sa_trie_insert(__pyx_v_node, -1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":348 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":348 * node = collocations._insert(data.arr+i1, l1) * node = trie_insert(node, -1) * for i from i2 <= i < i2+l2: # <<<<<<<<<<<<<< @@ -31207,7 +31202,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_13 = (__pyx_v_i2 + __pyx_v_l2); for (__pyx_v_i = __pyx_v_i2; __pyx_v_i < __pyx_t_13; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":349 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":349 * node = trie_insert(node, -1) * for i from i2 <= i < i2+l2: * node = trie_insert(node, data.arr[i]) # <<<<<<<<<<<<<< @@ -31217,7 +31212,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_node = __pyx_f_3_sa_trie_insert(__pyx_v_node, (__pyx_v_data->arr[__pyx_v_i])); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":350 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":350 * for i from i2 <= i < i2+l2: * node = trie_insert(node, data.arr[i]) * trie_node_data_append(node, i1) # <<<<<<<<<<<<<< @@ -31228,7 +31223,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":351 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":351 * node = trie_insert(node, data.arr[i]) * trie_node_data_append(node, i1) * trie_node_data_append(node, i2) # <<<<<<<<<<<<<< @@ -31239,7 +31234,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":352 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":352 * trie_node_data_append(node, i1) * trie_node_data_append(node, i2) * if super_frequent_patterns._contains(data.arr+i2, l2) != NULL: # <<<<<<<<<<<<<< @@ -31249,7 +31244,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_11 = (((struct __pyx_vtabstruct_3_sa_TrieMap *)__pyx_v_super_frequent_patterns->__pyx_vtab)->_contains(__pyx_v_super_frequent_patterns, (__pyx_v_data->arr + __pyx_v_i2), __pyx_v_l2) != NULL); if (__pyx_t_11) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":353 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":353 * trie_node_data_append(node, i2) * if super_frequent_patterns._contains(data.arr+i2, l2) != NULL: * if super_frequent_patterns._contains(data.arr+i1, l1) != NULL: # <<<<<<<<<<<<<< @@ -31259,7 +31254,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_11 = (((struct __pyx_vtabstruct_3_sa_TrieMap *)__pyx_v_super_frequent_patterns->__pyx_vtab)->_contains(__pyx_v_super_frequent_patterns, (__pyx_v_data->arr + __pyx_v_i1), __pyx_v_l1) != NULL); if (__pyx_t_11) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":354 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":354 * if super_frequent_patterns._contains(data.arr+i2, l2) != NULL: * if super_frequent_patterns._contains(data.arr+i1, l1) != NULL: * is_super = 1 # <<<<<<<<<<<<<< @@ -31271,7 +31266,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":356 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":356 * is_super = 1 * else: * is_super = 0 # <<<<<<<<<<<<<< @@ -31282,7 +31277,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __pyx_L25:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":357 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":357 * else: * is_super = 0 * ptr3 = ptr2 + 2 # <<<<<<<<<<<<<< @@ -31291,7 +31286,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_ptr3 = (__pyx_v_ptr2 + 2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":358 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":358 * is_super = 0 * ptr3 = ptr2 + 2 * while ptr3 < N: # <<<<<<<<<<<<<< @@ -31302,7 +31297,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_11 = (__pyx_v_ptr3 < __pyx_v_N); if (!__pyx_t_11) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":359 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":359 * ptr3 = ptr2 + 2 * while ptr3 < N: * i3 = queue.arr[ptr3] # <<<<<<<<<<<<<< @@ -31311,7 +31306,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_i3 = (__pyx_v_queue->arr[__pyx_v_ptr3]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":360 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":360 * while ptr3 < N: * i3 = queue.arr[ptr3] * if i3 == -1 or i3 - i1 >= self.train_max_initial_size: # <<<<<<<<<<<<<< @@ -31327,7 +31322,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } if (__pyx_t_19) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":361 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":361 * i3 = queue.arr[ptr3] * if i3 == -1 or i3 - i1 >= self.train_max_initial_size: * break # <<<<<<<<<<<<<< @@ -31339,7 +31334,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __pyx_L28:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":362 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":362 * if i3 == -1 or i3 - i1 >= self.train_max_initial_size: * break * l3 = queue.arr[ptr3+1] # <<<<<<<<<<<<<< @@ -31348,7 +31343,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_l3 = (__pyx_v_queue->arr[(__pyx_v_ptr3 + 1)]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":363 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":363 * break * l3 = queue.arr[ptr3+1] * if (i3 - i2 - l2 >= self.train_min_gap_size and # <<<<<<<<<<<<<< @@ -31358,7 +31353,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_19 = (((__pyx_v_i3 - __pyx_v_i2) - __pyx_v_l2) >= __pyx_v_self->train_min_gap_size); if (__pyx_t_19) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":364 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":364 * l3 = queue.arr[ptr3+1] * if (i3 - i2 - l2 >= self.train_min_gap_size and * i3 + l3 - i1 <= self.train_max_initial_size and # <<<<<<<<<<<<<< @@ -31368,7 +31363,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_11 = (((__pyx_v_i3 + __pyx_v_l3) - __pyx_v_i1) <= __pyx_v_self->train_max_initial_size); if (__pyx_t_11) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":365 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":365 * if (i3 - i2 - l2 >= self.train_min_gap_size and * i3 + l3 - i1 <= self.train_max_initial_size and * l1+l2+l3+2 <= self.max_length): # <<<<<<<<<<<<<< @@ -31386,7 +31381,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } if (__pyx_t_11) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":366 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":366 * i3 + l3 - i1 <= self.train_max_initial_size and * l1+l2+l3+2 <= self.max_length): * if is_super or super_frequent_patterns._contains(data.arr+i3, l3) != NULL: # <<<<<<<<<<<<<< @@ -31401,7 +31396,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } if (__pyx_t_19) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":367 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":367 * l1+l2+l3+2 <= self.max_length): * if is_super or super_frequent_patterns._contains(data.arr+i3, l3) != NULL: * node = collocations._insert(data.arr+i1, l1) # <<<<<<<<<<<<<< @@ -31410,7 +31405,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_node = ((struct __pyx_vtabstruct_3_sa_TrieMap *)__pyx_v_collocations->__pyx_vtab)->_insert(__pyx_v_collocations, (__pyx_v_data->arr + __pyx_v_i1), __pyx_v_l1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":368 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":368 * if is_super or super_frequent_patterns._contains(data.arr+i3, l3) != NULL: * node = collocations._insert(data.arr+i1, l1) * node = trie_insert(node, -1) # <<<<<<<<<<<<<< @@ -31419,7 +31414,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_node = __pyx_f_3_sa_trie_insert(__pyx_v_node, -1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":369 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":369 * node = collocations._insert(data.arr+i1, l1) * node = trie_insert(node, -1) * for i from i2 <= i < i2+l2: # <<<<<<<<<<<<<< @@ -31429,7 +31424,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_13 = (__pyx_v_i2 + __pyx_v_l2); for (__pyx_v_i = __pyx_v_i2; __pyx_v_i < __pyx_t_13; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":370 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":370 * node = trie_insert(node, -1) * for i from i2 <= i < i2+l2: * node = trie_insert(node, data.arr[i]) # <<<<<<<<<<<<<< @@ -31439,7 +31434,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_node = __pyx_f_3_sa_trie_insert(__pyx_v_node, (__pyx_v_data->arr[__pyx_v_i])); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":371 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":371 * for i from i2 <= i < i2+l2: * node = trie_insert(node, data.arr[i]) * node = trie_insert(node, -1) # <<<<<<<<<<<<<< @@ -31448,7 +31443,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_node = __pyx_f_3_sa_trie_insert(__pyx_v_node, -1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":372 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":372 * node = trie_insert(node, data.arr[i]) * node = trie_insert(node, -1) * for i from i3 <= i < i3+l3: # <<<<<<<<<<<<<< @@ -31458,7 +31453,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_13 = (__pyx_v_i3 + __pyx_v_l3); for (__pyx_v_i = __pyx_v_i3; __pyx_v_i < __pyx_t_13; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":373 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":373 * node = trie_insert(node, -1) * for i from i3 <= i < i3+l3: * node = trie_insert(node, data.arr[i]) # <<<<<<<<<<<<<< @@ -31468,7 +31463,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_node = __pyx_f_3_sa_trie_insert(__pyx_v_node, (__pyx_v_data->arr[__pyx_v_i])); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":374 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":374 * for i from i3 <= i < i3+l3: * node = trie_insert(node, data.arr[i]) * trie_node_data_append(node, i1) # <<<<<<<<<<<<<< @@ -31479,7 +31474,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":375 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":375 * node = trie_insert(node, data.arr[i]) * trie_node_data_append(node, i1) * trie_node_data_append(node, i2) # <<<<<<<<<<<<<< @@ -31490,7 +31485,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":376 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":376 * trie_node_data_append(node, i1) * trie_node_data_append(node, i2) * trie_node_data_append(node, i3) # <<<<<<<<<<<<<< @@ -31507,7 +31502,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __pyx_L29:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":377 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":377 * trie_node_data_append(node, i2) * trie_node_data_append(node, i3) * ptr3 = ptr3 + 2 # <<<<<<<<<<<<<< @@ -31524,7 +31519,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __pyx_L21:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":378 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":378 * trie_node_data_append(node, i3) * ptr3 = ptr3 + 2 * ptr2 = ptr2 + 2 # <<<<<<<<<<<<<< @@ -31535,7 +31530,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __pyx_L19_break:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":379 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":379 * ptr3 = ptr3 + 2 * ptr2 = ptr2 + 2 * ptr1 = ptr1 + 2 # <<<<<<<<<<<<<< @@ -31547,7 +31542,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":381 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":381 * ptr1 = ptr1 + 2 * else: * sent_count = sent_count + 1 # <<<<<<<<<<<<<< @@ -31556,7 +31551,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_sent_count = (__pyx_v_sent_count + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":382 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":382 * else: * sent_count = sent_count + 1 * if sent_count % 10000 == 0: # <<<<<<<<<<<<<< @@ -31566,7 +31561,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_19 = (__Pyx_mod_long(__pyx_v_sent_count, 10000) == 0); if (__pyx_t_19) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":383 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":383 * sent_count = sent_count + 1 * if sent_count % 10000 == 0: * logger.debug(" %d sentences", sent_count) # <<<<<<<<<<<<<< @@ -31597,7 +31592,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __pyx_L35:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":384 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":384 * if sent_count % 10000 == 0: * logger.debug(" %d sentences", sent_count) * ptr1 = ptr1 + 1 # <<<<<<<<<<<<<< @@ -31609,7 +31604,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_L17:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":386 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":386 * ptr1 = ptr1 + 1 * * self.precomputed_collocations = collocations.toMap(False) # <<<<<<<<<<<<<< @@ -31635,7 +31630,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_self->precomputed_collocations = __pyx_t_8; __pyx_t_8 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":387 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":387 * * self.precomputed_collocations = collocations.toMap(False) * self.precomputed_index = frequent_patterns.toMap(True) # <<<<<<<<<<<<<< @@ -31661,7 +31656,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_self->precomputed_index = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":389 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":389 * self.precomputed_index = frequent_patterns.toMap(True) * * x = 0 # <<<<<<<<<<<<<< @@ -31671,7 +31666,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_INCREF(__pyx_int_0); __pyx_v_x = __pyx_int_0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":390 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":390 * * x = 0 * for pattern1 in J_set: # <<<<<<<<<<<<<< @@ -31697,7 +31692,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_pattern1 = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":391 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":391 * x = 0 * for pattern1 in J_set: * for pattern2 in J_set: # <<<<<<<<<<<<<< @@ -31723,7 +31718,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_pattern2 = __pyx_t_8; __pyx_t_8 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":392 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":392 * for pattern1 in J_set: * for pattern2 in J_set: * if len(pattern1) + len(pattern2) + 1 < self.max_length: # <<<<<<<<<<<<<< @@ -31735,7 +31730,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_19 = (((__pyx_t_2 + __pyx_t_14) + 1) < __pyx_v_self->max_length); if (__pyx_t_19) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":393 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":393 * for pattern2 in J_set: * if len(pattern1) + len(pattern2) + 1 < self.max_length: * combined_pattern = pattern1 + (-1,) + pattern2 # <<<<<<<<<<<<<< @@ -31751,7 +31746,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_combined_pattern = __pyx_t_7; __pyx_t_7 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":394 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":394 * if len(pattern1) + len(pattern2) + 1 < self.max_length: * combined_pattern = pattern1 + (-1,) + pattern2 * J2_set.add(combined_pattern) # <<<<<<<<<<<<<< @@ -31767,7 +31762,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":396 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":396 * J2_set.add(combined_pattern) * * for pattern1 in I_set: # <<<<<<<<<<<<<< @@ -31793,7 +31788,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_pattern1 = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":397 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":397 * * for pattern1 in I_set: * for pattern2 in I_set: # <<<<<<<<<<<<<< @@ -31819,7 +31814,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_pattern2 = __pyx_t_7; __pyx_t_7 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":398 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":398 * for pattern1 in I_set: * for pattern2 in I_set: * x = x+1 # <<<<<<<<<<<<<< @@ -31832,7 +31827,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_x = __pyx_t_7; __pyx_t_7 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":399 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":399 * for pattern2 in I_set: * x = x+1 * if len(pattern1) + len(pattern2) + 1 <= self.max_length: # <<<<<<<<<<<<<< @@ -31844,7 +31839,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_19 = (((__pyx_t_14 + __pyx_t_2) + 1) <= __pyx_v_self->max_length); if (__pyx_t_19) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":400 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":400 * x = x+1 * if len(pattern1) + len(pattern2) + 1 <= self.max_length: * combined_pattern = pattern1 + (-1,) + pattern2 # <<<<<<<<<<<<<< @@ -31860,7 +31855,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_combined_pattern = __pyx_t_8; __pyx_t_8 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":401 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":401 * if len(pattern1) + len(pattern2) + 1 <= self.max_length: * combined_pattern = pattern1 + (-1,) + pattern2 * IJ_set.add(combined_pattern) # <<<<<<<<<<<<<< @@ -31876,7 +31871,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":403 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":403 * IJ_set.add(combined_pattern) * * for pattern1 in I_set: # <<<<<<<<<<<<<< @@ -31902,7 +31897,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_pattern1 = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":404 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":404 * * for pattern1 in I_set: * for pattern2 in J2_set: # <<<<<<<<<<<<<< @@ -31928,7 +31923,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_pattern2 = __pyx_t_8; __pyx_t_8 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":405 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":405 * for pattern1 in I_set: * for pattern2 in J2_set: * x = x+2 # <<<<<<<<<<<<<< @@ -31941,7 +31936,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_x = __pyx_t_8; __pyx_t_8 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":406 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":406 * for pattern2 in J2_set: * x = x+2 * if len(pattern1) + len(pattern2) + 1<= self.max_length: # <<<<<<<<<<<<<< @@ -31953,7 +31948,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_19 = (((__pyx_t_2 + __pyx_t_14) + 1) <= __pyx_v_self->max_length); if (__pyx_t_19) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":407 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":407 * x = x+2 * if len(pattern1) + len(pattern2) + 1<= self.max_length: * combined_pattern = pattern1 + (-1,) + pattern2 # <<<<<<<<<<<<<< @@ -31969,7 +31964,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_combined_pattern = __pyx_t_7; __pyx_t_7 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":408 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":408 * if len(pattern1) + len(pattern2) + 1<= self.max_length: * combined_pattern = pattern1 + (-1,) + pattern2 * IJ_set.add(combined_pattern) # <<<<<<<<<<<<<< @@ -31978,7 +31973,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_t_15 = PySet_Add(__pyx_v_IJ_set, __pyx_v_combined_pattern); if (unlikely(__pyx_t_15 == -1)) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 408; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":409 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":409 * combined_pattern = pattern1 + (-1,) + pattern2 * IJ_set.add(combined_pattern) * combined_pattern = pattern2 + (-1,) + pattern1 # <<<<<<<<<<<<<< @@ -31994,7 +31989,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_combined_pattern = __pyx_t_8; __pyx_t_8 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":410 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":410 * IJ_set.add(combined_pattern) * combined_pattern = pattern2 + (-1,) + pattern1 * IJ_set.add(combined_pattern) # <<<<<<<<<<<<<< @@ -32010,7 +32005,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":412 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":412 * IJ_set.add(combined_pattern) * * N = len(pattern_rank) # <<<<<<<<<<<<<< @@ -32020,7 +32015,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_14 = PyDict_Size(((PyObject *)__pyx_v_pattern_rank)); if (unlikely(__pyx_t_14 == -1)) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 412; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_N = __pyx_t_14; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":413 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":413 * * N = len(pattern_rank) * cost_by_rank = IntList(initial_len=N) # <<<<<<<<<<<<<< @@ -32039,7 +32034,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_cost_by_rank = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":414 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":414 * N = len(pattern_rank) * cost_by_rank = IntList(initial_len=N) * count_by_rank = IntList(initial_len=N) # <<<<<<<<<<<<<< @@ -32058,7 +32053,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_count_by_rank = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":415 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":415 * cost_by_rank = IntList(initial_len=N) * count_by_rank = IntList(initial_len=N) * for pattern, arr in self.precomputed_collocations.iteritems(): # <<<<<<<<<<<<<< @@ -32088,7 +32083,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_arr = __pyx_t_8; __pyx_t_8 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":416 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":416 * count_by_rank = IntList(initial_len=N) * for pattern, arr in self.precomputed_collocations.iteritems(): * if pattern not in IJ_set: # <<<<<<<<<<<<<< @@ -32098,7 +32093,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_19 = (__Pyx_PySequence_Contains(__pyx_v_pattern, ((PyObject *)__pyx_v_IJ_set), Py_NE)); if (unlikely(__pyx_t_19 < 0)) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 416; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_19) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":417 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":417 * for pattern, arr in self.precomputed_collocations.iteritems(): * if pattern not in IJ_set: * s = "" # <<<<<<<<<<<<<< @@ -32109,7 +32104,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_XDECREF(__pyx_v_s); __pyx_v_s = ((PyObject *)__pyx_kp_s_45); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":418 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":418 * if pattern not in IJ_set: * s = "" * for word_id in pattern: # <<<<<<<<<<<<<< @@ -32154,7 +32149,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_word_id = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":419 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":419 * s = "" * for word_id in pattern: * if word_id == -1: # <<<<<<<<<<<<<< @@ -32166,7 +32161,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; if (__pyx_t_19) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":420 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":420 * for word_id in pattern: * if word_id == -1: * s = s + "X " # <<<<<<<<<<<<<< @@ -32182,7 +32177,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":422 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":422 * s = s + "X " * else: * s = s + darray.id2word[word_id] + " " # <<<<<<<<<<<<<< @@ -32205,7 +32200,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":423 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":423 * else: * s = s + darray.id2word[word_id] + " " * logger.warn("ERROR: unexpected pattern %s in set of precomputed collocations", s) # <<<<<<<<<<<<<< @@ -32234,7 +32229,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":425 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":425 * logger.warn("ERROR: unexpected pattern %s in set of precomputed collocations", s) * else: * chunk = () # <<<<<<<<<<<<<< @@ -32245,7 +32240,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_XDECREF(((PyObject *)__pyx_v_chunk)); __pyx_v_chunk = __pyx_empty_tuple; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":426 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":426 * else: * chunk = () * max_rank = 0 # <<<<<<<<<<<<<< @@ -32254,7 +32249,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_max_rank = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":427 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":427 * chunk = () * max_rank = 0 * arity = 0 # <<<<<<<<<<<<<< @@ -32265,7 +32260,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_XDECREF(__pyx_v_arity); __pyx_v_arity = __pyx_int_0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":428 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":428 * max_rank = 0 * arity = 0 * for word_id in pattern: # <<<<<<<<<<<<<< @@ -32310,7 +32305,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_word_id = __pyx_t_8; __pyx_t_8 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":429 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":429 * arity = 0 * for word_id in pattern: * if word_id == -1: # <<<<<<<<<<<<<< @@ -32322,7 +32317,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0; if (__pyx_t_19) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":430 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":430 * for word_id in pattern: * if word_id == -1: * max_rank = max(max_rank, pattern_rank[chunk]) # <<<<<<<<<<<<<< @@ -32352,7 +32347,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; __pyx_v_max_rank = __pyx_t_16; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":431 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":431 * if word_id == -1: * max_rank = max(max_rank, pattern_rank[chunk]) * arity = arity + 1 # <<<<<<<<<<<<<< @@ -32365,7 +32360,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_arity = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":432 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":432 * max_rank = max(max_rank, pattern_rank[chunk]) * arity = arity + 1 * chunk = () # <<<<<<<<<<<<<< @@ -32379,7 +32374,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":434 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":434 * chunk = () * else: * chunk = chunk + (word_id,) # <<<<<<<<<<<<<< @@ -32402,7 +32397,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":435 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":435 * else: * chunk = chunk + (word_id,) * max_rank = max(max_rank, pattern_rank[chunk]) # <<<<<<<<<<<<<< @@ -32432,7 +32427,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0; __pyx_v_max_rank = __pyx_t_16; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":436 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":436 * chunk = chunk + (word_id,) * max_rank = max(max_rank, pattern_rank[chunk]) * cost_by_rank.arr[max_rank] = cost_by_rank.arr[max_rank] + (4*len(arr)) # <<<<<<<<<<<<<< @@ -32442,7 +32437,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_12 = PyObject_Length(__pyx_v_arr); if (unlikely(__pyx_t_12 == -1)) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 436; __pyx_clineno = __LINE__; goto __pyx_L1_error;} (__pyx_v_cost_by_rank->arr[__pyx_v_max_rank]) = ((__pyx_v_cost_by_rank->arr[__pyx_v_max_rank]) + (4 * __pyx_t_12)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":437 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":437 * max_rank = max(max_rank, pattern_rank[chunk]) * cost_by_rank.arr[max_rank] = cost_by_rank.arr[max_rank] + (4*len(arr)) * count_by_rank.arr[max_rank] = count_by_rank.arr[max_rank] + (len(arr)/(arity+1)) # <<<<<<<<<<<<<< @@ -32472,7 +32467,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":439 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":439 * count_by_rank.arr[max_rank] = count_by_rank.arr[max_rank] + (len(arr)/(arity+1)) * * cumul_cost = 0 # <<<<<<<<<<<<<< @@ -32482,7 +32477,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_INCREF(__pyx_int_0); __pyx_v_cumul_cost = __pyx_int_0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":440 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":440 * * cumul_cost = 0 * cumul_count = 0 # <<<<<<<<<<<<<< @@ -32492,7 +32487,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_INCREF(__pyx_int_0); __pyx_v_cumul_count = __pyx_int_0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":441 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":441 * cumul_cost = 0 * cumul_count = 0 * for i from 0 <= i < N: # <<<<<<<<<<<<<< @@ -32502,7 +32497,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_13 = __pyx_v_N; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_13; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":442 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":442 * cumul_count = 0 * for i from 0 <= i < N: * cumul_cost = cumul_cost + cost_by_rank.arr[i] # <<<<<<<<<<<<<< @@ -32518,7 +32513,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_cumul_cost = __pyx_t_6; __pyx_t_6 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":443 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":443 * for i from 0 <= i < N: * cumul_cost = cumul_cost + cost_by_rank.arr[i] * cumul_count = cumul_count + count_by_rank.arr[i] # <<<<<<<<<<<<<< @@ -32534,7 +32529,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_cumul_count = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":444 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":444 * cumul_cost = cumul_cost + cost_by_rank.arr[i] * cumul_count = cumul_count + count_by_rank.arr[i] * logger.debug("RANK %d\tCOUNT, COST: %d %d\tCUMUL: %d, %d", i, count_by_rank.arr[i], cost_by_rank.arr[i], cumul_count, cumul_cost) # <<<<<<<<<<<<<< @@ -32579,7 +32574,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":446 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":446 * logger.debug("RANK %d\tCOUNT, COST: %d %d\tCUMUL: %d, %d", i, count_by_rank.arr[i], cost_by_rank.arr[i], cumul_count, cumul_cost) * * num_found_patterns = len(self.precomputed_collocations) # <<<<<<<<<<<<<< @@ -32595,7 +32590,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_num_found_patterns = __pyx_t_8; __pyx_t_8 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":447 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":447 * * num_found_patterns = len(self.precomputed_collocations) * for pattern in IJ_set: # <<<<<<<<<<<<<< @@ -32621,7 +32616,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_v_pattern = __pyx_t_7; __pyx_t_7 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":448 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":448 * num_found_patterns = len(self.precomputed_collocations) * for pattern in IJ_set: * if pattern not in self.precomputed_collocations: # <<<<<<<<<<<<<< @@ -32631,7 +32626,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __pyx_t_19 = (__Pyx_PySequence_Contains(__pyx_v_pattern, __pyx_v_self->precomputed_collocations, Py_NE)); if (unlikely(__pyx_t_19 < 0)) {__pyx_filename = __pyx_f[11]; __pyx_lineno = 448; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_19) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":449 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":449 * for pattern in IJ_set: * if pattern not in self.precomputed_collocations: * self.precomputed_collocations[pattern] = IntList() # <<<<<<<<<<<<<< @@ -32648,7 +32643,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s } __Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":451 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":451 * self.precomputed_collocations[pattern] = IntList() * * cdef float stop_time = monitor_cpu() # <<<<<<<<<<<<<< @@ -32657,7 +32652,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s */ __pyx_v_stop_time = __pyx_f_3_sa_monitor_cpu(); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":452 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":452 * * cdef float stop_time = monitor_cpu() * logger.info("Precomputed collocations for %d patterns out of %d possible (upper bound %d)", num_found_patterns, len(self.precomputed_collocations), x) # <<<<<<<<<<<<<< @@ -32695,7 +32690,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_DECREF(((PyObject *)__pyx_t_6)); __pyx_t_6 = 0; __Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":453 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":453 * cdef float stop_time = monitor_cpu() * logger.info("Precomputed collocations for %d patterns out of %d possible (upper bound %d)", num_found_patterns, len(self.precomputed_collocations), x) * logger.info("Precomputed inverted index for %d patterns ", len(self.precomputed_index)) # <<<<<<<<<<<<<< @@ -32726,7 +32721,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s __Pyx_DECREF(((PyObject *)__pyx_t_7)); __pyx_t_7 = 0; __Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":454 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":454 * logger.info("Precomputed collocations for %d patterns out of %d possible (upper bound %d)", num_found_patterns, len(self.precomputed_collocations), x) * logger.info("Precomputed inverted index for %d patterns ", len(self.precomputed_index)) * logger.info("Precomputation took %f seconds", (stop_time - start_time)) # <<<<<<<<<<<<<< @@ -32812,7 +32807,7 @@ static int __pyx_pw_3_sa_11SuffixArray_1__cinit__(PyObject *__pyx_v_self, PyObje static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__from_binary,&__pyx_n_s__from_text,&__pyx_n_s__side,0}; PyObject* values[3] = {0,0,0}; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":11 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":11 * cdef IntList ha * * def __cinit__(self, from_binary=None, from_text=None, side=None): # <<<<<<<<<<<<<< @@ -32891,7 +32886,7 @@ static int __pyx_pf_3_sa_11SuffixArray___cinit__(struct __pyx_obj_3_sa_SuffixArr int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":12 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":12 * * def __cinit__(self, from_binary=None, from_text=None, side=None): * self.darray = DataArray() # <<<<<<<<<<<<<< @@ -32906,7 +32901,7 @@ static int __pyx_pf_3_sa_11SuffixArray___cinit__(struct __pyx_obj_3_sa_SuffixArr __pyx_v_self->darray = ((struct __pyx_obj_3_sa_DataArray *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":13 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":13 * def __cinit__(self, from_binary=None, from_text=None, side=None): * self.darray = DataArray() * self.sa = IntList() # <<<<<<<<<<<<<< @@ -32921,7 +32916,7 @@ static int __pyx_pf_3_sa_11SuffixArray___cinit__(struct __pyx_obj_3_sa_SuffixArr __pyx_v_self->sa = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":14 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":14 * self.darray = DataArray() * self.sa = IntList() * self.ha = IntList() # <<<<<<<<<<<<<< @@ -32936,7 +32931,7 @@ static int __pyx_pf_3_sa_11SuffixArray___cinit__(struct __pyx_obj_3_sa_SuffixArr __pyx_v_self->ha = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":15 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":15 * self.sa = IntList() * self.ha = IntList() * if from_binary: # <<<<<<<<<<<<<< @@ -32946,7 +32941,7 @@ static int __pyx_pf_3_sa_11SuffixArray___cinit__(struct __pyx_obj_3_sa_SuffixArr __pyx_t_2 = __Pyx_PyObject_IsTrue(__pyx_v_from_binary); if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[12]; __pyx_lineno = 15; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":16 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":16 * self.ha = IntList() * if from_binary: * self.read_binary(from_binary) # <<<<<<<<<<<<<< @@ -32968,7 +32963,7 @@ static int __pyx_pf_3_sa_11SuffixArray___cinit__(struct __pyx_obj_3_sa_SuffixArr goto __pyx_L3; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":17 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":17 * if from_binary: * self.read_binary(from_binary) * elif from_text: # <<<<<<<<<<<<<< @@ -32978,7 +32973,7 @@ static int __pyx_pf_3_sa_11SuffixArray___cinit__(struct __pyx_obj_3_sa_SuffixArr __pyx_t_2 = __Pyx_PyObject_IsTrue(__pyx_v_from_text); if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[12]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":18 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":18 * self.read_binary(from_binary) * elif from_text: * self.read_text(from_text, side) # <<<<<<<<<<<<<< @@ -33028,7 +33023,7 @@ static PyObject *__pyx_pw_3_sa_11SuffixArray_3__getitem__(PyObject *__pyx_v_self return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":20 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":20 * self.read_text(from_text, side) * * def __getitem__(self, i): # <<<<<<<<<<<<<< @@ -33046,7 +33041,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_2__getitem__(struct __pyx_obj_3_sa_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__getitem__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":21 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":21 * * def __getitem__(self, i): * return self.sa.arr[i] # <<<<<<<<<<<<<< @@ -33130,7 +33125,7 @@ static PyObject *__pyx_pw_3_sa_11SuffixArray_5read_text(PyObject *__pyx_v_self, return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":23 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":23 * return self.sa.arr[i] * * def read_text(self, filename, side): # <<<<<<<<<<<<<< @@ -33170,7 +33165,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su int __pyx_clineno = 0; __Pyx_RefNannySetupContext("read_text", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":29 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":29 * cdef IntList isa, word_count * * self.darray = DataArray(from_text=filename, side=side, use_sent_id=True) # <<<<<<<<<<<<<< @@ -33194,7 +33189,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_v_self->darray = ((struct __pyx_obj_3_sa_DataArray *)__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":30 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":30 * * self.darray = DataArray(from_text=filename, side=side, use_sent_id=True) * N = len(self.darray) # <<<<<<<<<<<<<< @@ -33207,7 +33202,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __pyx_v_N = __pyx_t_3; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":31 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":31 * self.darray = DataArray(from_text=filename, side=side, use_sent_id=True) * N = len(self.darray) * V = len(self.darray.id2word) # <<<<<<<<<<<<<< @@ -33220,7 +33215,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __pyx_v_V = __pyx_t_3; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":33 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":33 * V = len(self.darray.id2word) * * self.sa = IntList(initial_len=N) # <<<<<<<<<<<<<< @@ -33242,7 +33237,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_v_self->sa = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":34 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":34 * * self.sa = IntList(initial_len=N) * self.ha = IntList(initial_len=V+1) # <<<<<<<<<<<<<< @@ -33264,7 +33259,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_v_self->ha = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":36 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":36 * self.ha = IntList(initial_len=V+1) * * isa = IntList(initial_len=N) # <<<<<<<<<<<<<< @@ -33283,7 +33278,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_v_isa = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":37 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":37 * * isa = IntList(initial_len=N) * word_count = IntList(initial_len=V+1) # <<<<<<<<<<<<<< @@ -33302,7 +33297,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_v_word_count = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":40 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":40 * * '''Step 1: bucket sort data''' * cdef float sort_start_time = monitor_cpu() # <<<<<<<<<<<<<< @@ -33311,7 +33306,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ __pyx_v_sort_start_time = __pyx_f_3_sa_monitor_cpu(); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":41 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":41 * '''Step 1: bucket sort data''' * cdef float sort_start_time = monitor_cpu() * cdef float start_time = sort_start_time # <<<<<<<<<<<<<< @@ -33320,7 +33315,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ __pyx_v_start_time = __pyx_v_sort_start_time; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":42 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":42 * cdef float sort_start_time = monitor_cpu() * cdef float start_time = sort_start_time * for i from 0 <= i < N: # <<<<<<<<<<<<<< @@ -33330,7 +33325,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_t_4 = __pyx_v_N; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_4; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":43 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":43 * cdef float start_time = sort_start_time * for i from 0 <= i < N: * a_i = self.darray.data.arr[i] # <<<<<<<<<<<<<< @@ -33339,7 +33334,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ __pyx_v_a_i = (__pyx_v_self->darray->data->arr[__pyx_v_i]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":44 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":44 * for i from 0 <= i < N: * a_i = self.darray.data.arr[i] * word_count.arr[a_i] = word_count.arr[a_i] + 1 # <<<<<<<<<<<<<< @@ -33349,7 +33344,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su (__pyx_v_word_count->arr[__pyx_v_a_i]) = ((__pyx_v_word_count->arr[__pyx_v_a_i]) + 1); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":46 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":46 * word_count.arr[a_i] = word_count.arr[a_i] + 1 * * n = 0 # <<<<<<<<<<<<<< @@ -33358,7 +33353,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ __pyx_v_n = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":47 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":47 * * n = 0 * for i from 0 <= i < V+1: # <<<<<<<<<<<<<< @@ -33368,7 +33363,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_t_5 = (__pyx_v_V + 1); for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_5; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":48 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":48 * n = 0 * for i from 0 <= i < V+1: * self.ha.arr[i] = n # <<<<<<<<<<<<<< @@ -33377,7 +33372,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ (__pyx_v_self->ha->arr[__pyx_v_i]) = __pyx_v_n; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":49 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":49 * for i from 0 <= i < V+1: * self.ha.arr[i] = n * n = n + word_count.arr[i] # <<<<<<<<<<<<<< @@ -33386,7 +33381,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ __pyx_v_n = (__pyx_v_n + (__pyx_v_word_count->arr[__pyx_v_i])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":50 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":50 * self.ha.arr[i] = n * n = n + word_count.arr[i] * word_count.arr[i] = 0 # <<<<<<<<<<<<<< @@ -33396,7 +33391,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su (__pyx_v_word_count->arr[__pyx_v_i]) = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":52 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":52 * word_count.arr[i] = 0 * * for i from 0 <= i < N: # <<<<<<<<<<<<<< @@ -33406,7 +33401,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_t_4 = __pyx_v_N; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_4; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":53 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":53 * * for i from 0 <= i < N: * a_i = self.darray.data.arr[i] # <<<<<<<<<<<<<< @@ -33415,7 +33410,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ __pyx_v_a_i = (__pyx_v_self->darray->data->arr[__pyx_v_i]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":54 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":54 * for i from 0 <= i < N: * a_i = self.darray.data.arr[i] * self.sa.arr[self.ha.arr[a_i] + word_count.arr[a_i]] = i # <<<<<<<<<<<<<< @@ -33424,7 +33419,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ (__pyx_v_self->sa->arr[((__pyx_v_self->ha->arr[__pyx_v_a_i]) + (__pyx_v_word_count->arr[__pyx_v_a_i]))]) = __pyx_v_i; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":55 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":55 * a_i = self.darray.data.arr[i] * self.sa.arr[self.ha.arr[a_i] + word_count.arr[a_i]] = i * isa.arr[i] = self.ha.arr[a_i + 1] - 1 # bucket pointer is last index in bucket # <<<<<<<<<<<<<< @@ -33433,7 +33428,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ (__pyx_v_isa->arr[__pyx_v_i]) = ((__pyx_v_self->ha->arr[(__pyx_v_a_i + 1)]) - 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":56 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":56 * self.sa.arr[self.ha.arr[a_i] + word_count.arr[a_i]] = i * isa.arr[i] = self.ha.arr[a_i + 1] - 1 # bucket pointer is last index in bucket * word_count.arr[a_i] = word_count.arr[a_i] + 1 # <<<<<<<<<<<<<< @@ -33443,7 +33438,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su (__pyx_v_word_count->arr[__pyx_v_a_i]) = ((__pyx_v_word_count->arr[__pyx_v_a_i]) + 1); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":59 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":59 * * '''Determine size of initial runs''' * current_run = 0 # <<<<<<<<<<<<<< @@ -33452,7 +33447,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ __pyx_v_current_run = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":60 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":60 * '''Determine size of initial runs''' * current_run = 0 * for i from 0 <= i < V+1: # <<<<<<<<<<<<<< @@ -33462,7 +33457,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_t_5 = (__pyx_v_V + 1); for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_5; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":61 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":61 * current_run = 0 * for i from 0 <= i < V+1: * if i < V and self.ha.arr[i+1] - self.ha.arr[i] == 1: # <<<<<<<<<<<<<< @@ -33478,7 +33473,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su } if (__pyx_t_8) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":62 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":62 * for i from 0 <= i < V+1: * if i < V and self.ha.arr[i+1] - self.ha.arr[i] == 1: * current_run = current_run + 1 # <<<<<<<<<<<<<< @@ -33490,7 +33485,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":64 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":64 * current_run = current_run + 1 * else: * if current_run > 0: # <<<<<<<<<<<<<< @@ -33500,7 +33495,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_t_8 = (__pyx_v_current_run > 0); if (__pyx_t_8) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":65 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":65 * else: * if current_run > 0: * self.sa.arr[self.ha.arr[i] - current_run] = -current_run # <<<<<<<<<<<<<< @@ -33509,7 +33504,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ (__pyx_v_self->sa->arr[((__pyx_v_self->ha->arr[__pyx_v_i]) - __pyx_v_current_run)]) = (-__pyx_v_current_run); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":66 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":66 * if current_run > 0: * self.sa.arr[self.ha.arr[i] - current_run] = -current_run * current_run = 0 # <<<<<<<<<<<<<< @@ -33524,7 +33519,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_L11:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":68 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":68 * current_run = 0 * * logger.info(" Bucket sort took %f seconds", (monitor_cpu() - sort_start_time)) # <<<<<<<<<<<<<< @@ -33552,7 +33547,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __Pyx_DECREF(((PyObject *)__pyx_t_9)); __pyx_t_9 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":71 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":71 * * '''Step 2: prefix-doubling sort''' * h = 1 # <<<<<<<<<<<<<< @@ -33561,7 +33556,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ __pyx_v_h = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":72 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":72 * '''Step 2: prefix-doubling sort''' * h = 1 * while self.sa.arr[0] != -N: # <<<<<<<<<<<<<< @@ -33572,7 +33567,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_t_8 = ((__pyx_v_self->sa->arr[0]) != (-__pyx_v_N)); if (!__pyx_t_8) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":73 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":73 * h = 1 * while self.sa.arr[0] != -N: * sort_start_time = monitor_cpu() # <<<<<<<<<<<<<< @@ -33581,7 +33576,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ __pyx_v_sort_start_time = __pyx_f_3_sa_monitor_cpu(); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":74 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":74 * while self.sa.arr[0] != -N: * sort_start_time = monitor_cpu() * logger.debug(" Refining, sort depth = %d", h) # <<<<<<<<<<<<<< @@ -33609,7 +33604,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":75 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":75 * sort_start_time = monitor_cpu() * logger.debug(" Refining, sort depth = %d", h) * i = 0 # <<<<<<<<<<<<<< @@ -33618,7 +33613,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ __pyx_v_i = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":76 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":76 * logger.debug(" Refining, sort depth = %d", h) * i = 0 * skip = 0 # <<<<<<<<<<<<<< @@ -33627,7 +33622,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ __pyx_v_skip = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":77 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":77 * i = 0 * skip = 0 * while i < N: # <<<<<<<<<<<<<< @@ -33638,7 +33633,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_t_8 = (__pyx_v_i < __pyx_v_N); if (!__pyx_t_8) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":78 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":78 * skip = 0 * while i < N: * if self.sa.arr[i] < 0: # <<<<<<<<<<<<<< @@ -33648,7 +33643,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_t_8 = ((__pyx_v_self->sa->arr[__pyx_v_i]) < 0); if (__pyx_t_8) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":79 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":79 * while i < N: * if self.sa.arr[i] < 0: * skip = skip + self.sa.arr[i] # <<<<<<<<<<<<<< @@ -33657,7 +33652,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ __pyx_v_skip = (__pyx_v_skip + (__pyx_v_self->sa->arr[__pyx_v_i])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":80 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":80 * if self.sa.arr[i] < 0: * skip = skip + self.sa.arr[i] * i = i - self.sa.arr[i] # <<<<<<<<<<<<<< @@ -33669,7 +33664,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":82 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":82 * i = i - self.sa.arr[i] * else: * if skip < 0: # <<<<<<<<<<<<<< @@ -33679,7 +33674,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_t_8 = (__pyx_v_skip < 0); if (__pyx_t_8) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":83 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":83 * else: * if skip < 0: * self.sa.arr[i+skip] = skip # <<<<<<<<<<<<<< @@ -33688,7 +33683,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ (__pyx_v_self->sa->arr[(__pyx_v_i + __pyx_v_skip)]) = __pyx_v_skip; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":84 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":84 * if skip < 0: * self.sa.arr[i+skip] = skip * skip = 0 # <<<<<<<<<<<<<< @@ -33700,7 +33695,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su } __pyx_L18:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":85 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":85 * self.sa.arr[i+skip] = skip * skip = 0 * j = isa.arr[self.sa.arr[i]] # <<<<<<<<<<<<<< @@ -33709,7 +33704,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ __pyx_v_j = (__pyx_v_isa->arr[(__pyx_v_self->sa->arr[__pyx_v_i])]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":86 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":86 * skip = 0 * j = isa.arr[self.sa.arr[i]] * self.q3sort(i, j, h, isa) # <<<<<<<<<<<<<< @@ -33744,7 +33739,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __Pyx_DECREF(((PyObject *)__pyx_t_11)); __pyx_t_11 = 0; __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":87 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":87 * j = isa.arr[self.sa.arr[i]] * self.q3sort(i, j, h, isa) * i = j+1 # <<<<<<<<<<<<<< @@ -33756,7 +33751,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_L17:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":88 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":88 * self.q3sort(i, j, h, isa) * i = j+1 * if skip < 0: # <<<<<<<<<<<<<< @@ -33766,7 +33761,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_t_8 = (__pyx_v_skip < 0); if (__pyx_t_8) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":89 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":89 * i = j+1 * if skip < 0: * self.sa.arr[i+skip] = skip # <<<<<<<<<<<<<< @@ -33778,7 +33773,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su } __pyx_L19:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":90 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":90 * if skip < 0: * self.sa.arr[i+skip] = skip * h = h * 2 # <<<<<<<<<<<<<< @@ -33787,7 +33782,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ __pyx_v_h = (__pyx_v_h * 2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":91 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":91 * self.sa.arr[i+skip] = skip * h = h * 2 * logger.debug(" Refinement took %f seconds", (monitor_cpu() - sort_start_time)) # <<<<<<<<<<<<<< @@ -33816,7 +33811,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":94 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":94 * * '''Step 3: read off suffix array from inverse suffix array''' * logger.info(" Finalizing sort...") # <<<<<<<<<<<<<< @@ -33833,7 +33828,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":95 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":95 * '''Step 3: read off suffix array from inverse suffix array''' * logger.info(" Finalizing sort...") * for i from 0 <= i < N: # <<<<<<<<<<<<<< @@ -33843,7 +33838,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su __pyx_t_4 = __pyx_v_N; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_4; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":96 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":96 * logger.info(" Finalizing sort...") * for i from 0 <= i < N: * j = isa.arr[i] # <<<<<<<<<<<<<< @@ -33852,7 +33847,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su */ __pyx_v_j = (__pyx_v_isa->arr[__pyx_v_i]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":97 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":97 * for i from 0 <= i < N: * j = isa.arr[i] * self.sa.arr[j] = i # <<<<<<<<<<<<<< @@ -33862,7 +33857,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_4read_text(struct __pyx_obj_3_sa_Su (__pyx_v_self->sa->arr[__pyx_v_j]) = __pyx_v_i; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":98 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":98 * j = isa.arr[i] * self.sa.arr[j] = i * logger.info("Suffix array construction took %f seconds", (monitor_cpu() - start_time)) # <<<<<<<<<<<<<< @@ -34000,7 +33995,7 @@ static PyObject *__pyx_pw_3_sa_11SuffixArray_7q3sort(PyObject *__pyx_v_self, PyO return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":100 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":100 * logger.info("Suffix array construction took %f seconds", (monitor_cpu() - start_time)) * * def q3sort(self, int i, int j, int h, IntList isa, pad=""): # <<<<<<<<<<<<<< @@ -34030,7 +34025,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi int __pyx_clineno = 0; __Pyx_RefNannySetupContext("q3sort", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":107 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":107 * cdef int k, midpoint, pval, phead, ptail, tmp * * if j-i < -1: # <<<<<<<<<<<<<< @@ -34040,7 +34035,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi __pyx_t_1 = ((__pyx_v_j - __pyx_v_i) < -1); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":108 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":108 * * if j-i < -1: * raise Exception("Unexpected condition found in q3sort: sort from %d to %d" % (i,j)) # <<<<<<<<<<<<<< @@ -34077,7 +34072,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":109 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":109 * if j-i < -1: * raise Exception("Unexpected condition found in q3sort: sort from %d to %d" % (i,j)) * if j-i == -1: # recursive base case -- empty interval # <<<<<<<<<<<<<< @@ -34087,7 +34082,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi __pyx_t_1 = ((__pyx_v_j - __pyx_v_i) == -1); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":110 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":110 * raise Exception("Unexpected condition found in q3sort: sort from %d to %d" % (i,j)) * if j-i == -1: # recursive base case -- empty interval * return # <<<<<<<<<<<<<< @@ -34101,7 +34096,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":111 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":111 * if j-i == -1: # recursive base case -- empty interval * return * if (j-i == 0): # recursive base case -- singleton interval # <<<<<<<<<<<<<< @@ -34111,7 +34106,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi __pyx_t_1 = ((__pyx_v_j - __pyx_v_i) == 0); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":112 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":112 * return * if (j-i == 0): # recursive base case -- singleton interval * isa.arr[self.sa.arr[i]] = i # <<<<<<<<<<<<<< @@ -34120,7 +34115,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi */ (__pyx_v_isa->arr[(__pyx_v_self->sa->arr[__pyx_v_i])]) = __pyx_v_i; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":113 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":113 * if (j-i == 0): # recursive base case -- singleton interval * isa.arr[self.sa.arr[i]] = i * self.sa.arr[i] = -1 # <<<<<<<<<<<<<< @@ -34129,7 +34124,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi */ (__pyx_v_self->sa->arr[__pyx_v_i]) = -1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":114 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":114 * isa.arr[self.sa.arr[i]] = i * self.sa.arr[i] = -1 * return # <<<<<<<<<<<<<< @@ -34143,7 +34138,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":123 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":123 * # If the method of assigning word_id's is changed, this method * # may need to be reconsidered as well. * midpoint = (i+j)/2 # <<<<<<<<<<<<<< @@ -34152,7 +34147,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi */ __pyx_v_midpoint = __Pyx_div_long((__pyx_v_i + __pyx_v_j), 2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":124 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":124 * # may need to be reconsidered as well. * midpoint = (i+j)/2 * pval = isa.arr[self.sa.arr[midpoint] + h] # <<<<<<<<<<<<<< @@ -34161,7 +34156,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi */ __pyx_v_pval = (__pyx_v_isa->arr[((__pyx_v_self->sa->arr[__pyx_v_midpoint]) + __pyx_v_h)]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":125 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":125 * midpoint = (i+j)/2 * pval = isa.arr[self.sa.arr[midpoint] + h] * if i != midpoint: # <<<<<<<<<<<<<< @@ -34171,7 +34166,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi __pyx_t_1 = (__pyx_v_i != __pyx_v_midpoint); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":126 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":126 * pval = isa.arr[self.sa.arr[midpoint] + h] * if i != midpoint: * tmp = self.sa.arr[midpoint] # <<<<<<<<<<<<<< @@ -34180,7 +34175,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi */ __pyx_v_tmp = (__pyx_v_self->sa->arr[__pyx_v_midpoint]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":127 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":127 * if i != midpoint: * tmp = self.sa.arr[midpoint] * self.sa.arr[midpoint] = self.sa.arr[i] # <<<<<<<<<<<<<< @@ -34189,7 +34184,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi */ (__pyx_v_self->sa->arr[__pyx_v_midpoint]) = (__pyx_v_self->sa->arr[__pyx_v_i]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":128 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":128 * tmp = self.sa.arr[midpoint] * self.sa.arr[midpoint] = self.sa.arr[i] * self.sa.arr[i] = tmp # <<<<<<<<<<<<<< @@ -34201,7 +34196,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi } __pyx_L6:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":129 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":129 * self.sa.arr[midpoint] = self.sa.arr[i] * self.sa.arr[i] = tmp * phead = i # <<<<<<<<<<<<<< @@ -34210,7 +34205,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi */ __pyx_v_phead = __pyx_v_i; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":130 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":130 * self.sa.arr[i] = tmp * phead = i * ptail = i # <<<<<<<<<<<<<< @@ -34219,7 +34214,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi */ __pyx_v_ptail = __pyx_v_i; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":134 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":134 * # find the three partitions. phead marks the first element * # of the middle partition, and ptail marks the last element * for k from i+1 <= k < j+1: # <<<<<<<<<<<<<< @@ -34229,7 +34224,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi __pyx_t_5 = (__pyx_v_j + 1); for (__pyx_v_k = (__pyx_v_i + 1); __pyx_v_k < __pyx_t_5; __pyx_v_k++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":135 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":135 * # of the middle partition, and ptail marks the last element * for k from i+1 <= k < j+1: * if isa.arr[self.sa.arr[k] + h] < pval: # <<<<<<<<<<<<<< @@ -34239,7 +34234,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi __pyx_t_1 = ((__pyx_v_isa->arr[((__pyx_v_self->sa->arr[__pyx_v_k]) + __pyx_v_h)]) < __pyx_v_pval); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":136 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":136 * for k from i+1 <= k < j+1: * if isa.arr[self.sa.arr[k] + h] < pval: * if k > ptail+1: # <<<<<<<<<<<<<< @@ -34249,7 +34244,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi __pyx_t_1 = (__pyx_v_k > (__pyx_v_ptail + 1)); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":137 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":137 * if isa.arr[self.sa.arr[k] + h] < pval: * if k > ptail+1: * tmp = self.sa.arr[phead] # <<<<<<<<<<<<<< @@ -34258,7 +34253,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi */ __pyx_v_tmp = (__pyx_v_self->sa->arr[__pyx_v_phead]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":138 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":138 * if k > ptail+1: * tmp = self.sa.arr[phead] * self.sa.arr[phead] = self.sa.arr[k] # <<<<<<<<<<<<<< @@ -34267,7 +34262,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi */ (__pyx_v_self->sa->arr[__pyx_v_phead]) = (__pyx_v_self->sa->arr[__pyx_v_k]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":139 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":139 * tmp = self.sa.arr[phead] * self.sa.arr[phead] = self.sa.arr[k] * self.sa.arr[k] = self.sa.arr[ptail+1] # <<<<<<<<<<<<<< @@ -34276,7 +34271,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi */ (__pyx_v_self->sa->arr[__pyx_v_k]) = (__pyx_v_self->sa->arr[(__pyx_v_ptail + 1)]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":140 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":140 * self.sa.arr[phead] = self.sa.arr[k] * self.sa.arr[k] = self.sa.arr[ptail+1] * self.sa.arr[ptail+1] = tmp # <<<<<<<<<<<<<< @@ -34288,7 +34283,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":142 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":142 * self.sa.arr[ptail+1] = tmp * else: # k == ptail+1 * tmp = self.sa.arr[phead] # <<<<<<<<<<<<<< @@ -34297,7 +34292,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi */ __pyx_v_tmp = (__pyx_v_self->sa->arr[__pyx_v_phead]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":143 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":143 * else: # k == ptail+1 * tmp = self.sa.arr[phead] * self.sa.arr[phead] = self.sa.arr[k] # <<<<<<<<<<<<<< @@ -34306,7 +34301,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi */ (__pyx_v_self->sa->arr[__pyx_v_phead]) = (__pyx_v_self->sa->arr[__pyx_v_k]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":144 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":144 * tmp = self.sa.arr[phead] * self.sa.arr[phead] = self.sa.arr[k] * self.sa.arr[k] = tmp # <<<<<<<<<<<<<< @@ -34317,7 +34312,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi } __pyx_L10:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":145 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":145 * self.sa.arr[phead] = self.sa.arr[k] * self.sa.arr[k] = tmp * phead = phead + 1 # <<<<<<<<<<<<<< @@ -34326,7 +34321,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi */ __pyx_v_phead = (__pyx_v_phead + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":146 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":146 * self.sa.arr[k] = tmp * phead = phead + 1 * ptail = ptail + 1 # <<<<<<<<<<<<<< @@ -34338,7 +34333,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":148 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":148 * ptail = ptail + 1 * else: * if isa.arr[self.sa.arr[k] + h] == pval: # <<<<<<<<<<<<<< @@ -34348,7 +34343,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi __pyx_t_1 = ((__pyx_v_isa->arr[((__pyx_v_self->sa->arr[__pyx_v_k]) + __pyx_v_h)]) == __pyx_v_pval); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":149 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":149 * else: * if isa.arr[self.sa.arr[k] + h] == pval: * if k > ptail+1: # <<<<<<<<<<<<<< @@ -34358,7 +34353,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi __pyx_t_1 = (__pyx_v_k > (__pyx_v_ptail + 1)); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":150 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":150 * if isa.arr[self.sa.arr[k] + h] == pval: * if k > ptail+1: * tmp = self.sa.arr[ptail+1] # <<<<<<<<<<<<<< @@ -34367,7 +34362,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi */ __pyx_v_tmp = (__pyx_v_self->sa->arr[(__pyx_v_ptail + 1)]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":151 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":151 * if k > ptail+1: * tmp = self.sa.arr[ptail+1] * self.sa.arr[ptail+1] = self.sa.arr[k] # <<<<<<<<<<<<<< @@ -34376,7 +34371,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi */ (__pyx_v_self->sa->arr[(__pyx_v_ptail + 1)]) = (__pyx_v_self->sa->arr[__pyx_v_k]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":152 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":152 * tmp = self.sa.arr[ptail+1] * self.sa.arr[ptail+1] = self.sa.arr[k] * self.sa.arr[k] = tmp # <<<<<<<<<<<<<< @@ -34388,7 +34383,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi } __pyx_L12:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":153 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":153 * self.sa.arr[ptail+1] = self.sa.arr[k] * self.sa.arr[k] = tmp * ptail = ptail + 1 # <<<<<<<<<<<<<< @@ -34403,7 +34398,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi __pyx_L9:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":156 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":156 * * # recursively sort smaller suffixes * self.q3sort(i, phead-1, h, isa, pad+" ") # <<<<<<<<<<<<<< @@ -34443,7 +34438,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi __Pyx_DECREF(((PyObject *)__pyx_t_8)); __pyx_t_8 = 0; __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":160 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":160 * # update suffixes with pivot value * # corresponds to update_group function in Larsson & Sadakane * for k from phead <= k < ptail+1: # <<<<<<<<<<<<<< @@ -34453,7 +34448,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi __pyx_t_5 = (__pyx_v_ptail + 1); for (__pyx_v_k = __pyx_v_phead; __pyx_v_k < __pyx_t_5; __pyx_v_k++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":161 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":161 * # corresponds to update_group function in Larsson & Sadakane * for k from phead <= k < ptail+1: * isa.arr[self.sa.arr[k]] = ptail # <<<<<<<<<<<<<< @@ -34463,7 +34458,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi (__pyx_v_isa->arr[(__pyx_v_self->sa->arr[__pyx_v_k])]) = __pyx_v_ptail; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":162 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":162 * for k from phead <= k < ptail+1: * isa.arr[self.sa.arr[k]] = ptail * if phead == ptail: # <<<<<<<<<<<<<< @@ -34473,7 +34468,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi __pyx_t_1 = (__pyx_v_phead == __pyx_v_ptail); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":163 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":163 * isa.arr[self.sa.arr[k]] = ptail * if phead == ptail: * self.sa.arr[phead] = -1 # <<<<<<<<<<<<<< @@ -34485,7 +34480,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_6q3sort(struct __pyx_obj_3_sa_Suffi } __pyx_L15:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":166 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":166 * * # recursively sort larger suffixes * self.q3sort(ptail+1, j, h, isa, pad+" ") # <<<<<<<<<<<<<< @@ -34563,7 +34558,7 @@ static PyObject *__pyx_pw_3_sa_11SuffixArray_9write_text(PyObject *__pyx_v_self, return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":169 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":169 * * * def write_text(self, char* filename): # <<<<<<<<<<<<<< @@ -34582,7 +34577,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_8write_text(struct __pyx_obj_3_sa_S int __pyx_clineno = 0; __Pyx_RefNannySetupContext("write_text", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":170 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":170 * * def write_text(self, char* filename): * self.darray.write_text(filename) # <<<<<<<<<<<<<< @@ -34639,7 +34634,7 @@ static PyObject *__pyx_pw_3_sa_11SuffixArray_11read_binary(PyObject *__pyx_v_sel return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":172 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":172 * self.darray.write_text(filename) * * def read_binary(self, char* filename): # <<<<<<<<<<<<<< @@ -34653,7 +34648,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_10read_binary(struct __pyx_obj_3_sa __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("read_binary", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":174 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":174 * def read_binary(self, char* filename): * cdef FILE *f * f = fopen(filename, "r") # <<<<<<<<<<<<<< @@ -34662,7 +34657,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_10read_binary(struct __pyx_obj_3_sa */ __pyx_v_f = fopen(__pyx_v_filename, __pyx_k__r); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":175 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":175 * cdef FILE *f * f = fopen(filename, "r") * self.darray.read_handle(f) # <<<<<<<<<<<<<< @@ -34671,7 +34666,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_10read_binary(struct __pyx_obj_3_sa */ ((struct __pyx_vtabstruct_3_sa_DataArray *)__pyx_v_self->darray->__pyx_vtab)->read_handle(__pyx_v_self->darray, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":176 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":176 * f = fopen(filename, "r") * self.darray.read_handle(f) * self.sa.read_handle(f) # <<<<<<<<<<<<<< @@ -34680,7 +34675,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_10read_binary(struct __pyx_obj_3_sa */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->sa->__pyx_vtab)->read_handle(__pyx_v_self->sa, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":177 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":177 * self.darray.read_handle(f) * self.sa.read_handle(f) * self.ha.read_handle(f) # <<<<<<<<<<<<<< @@ -34689,7 +34684,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_10read_binary(struct __pyx_obj_3_sa */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->ha->__pyx_vtab)->read_handle(__pyx_v_self->ha, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":178 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":178 * self.sa.read_handle(f) * self.ha.read_handle(f) * fclose(f) # <<<<<<<<<<<<<< @@ -34725,7 +34720,7 @@ static PyObject *__pyx_pw_3_sa_11SuffixArray_13write_binary(PyObject *__pyx_v_se return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":180 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":180 * fclose(f) * * def write_binary(self, char* filename): # <<<<<<<<<<<<<< @@ -34739,7 +34734,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_12write_binary(struct __pyx_obj_3_s __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("write_binary", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":182 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":182 * def write_binary(self, char* filename): * cdef FILE* f * f = fopen(filename, "w") # <<<<<<<<<<<<<< @@ -34748,7 +34743,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_12write_binary(struct __pyx_obj_3_s */ __pyx_v_f = fopen(__pyx_v_filename, __pyx_k__w); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":183 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":183 * cdef FILE* f * f = fopen(filename, "w") * self.darray.write_handle(f) # <<<<<<<<<<<<<< @@ -34757,7 +34752,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_12write_binary(struct __pyx_obj_3_s */ ((struct __pyx_vtabstruct_3_sa_DataArray *)__pyx_v_self->darray->__pyx_vtab)->write_handle(__pyx_v_self->darray, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":184 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":184 * f = fopen(filename, "w") * self.darray.write_handle(f) * self.sa.write_handle(f) # <<<<<<<<<<<<<< @@ -34766,7 +34761,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_12write_binary(struct __pyx_obj_3_s */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->sa->__pyx_vtab)->write_handle(__pyx_v_self->sa, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":185 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":185 * self.darray.write_handle(f) * self.sa.write_handle(f) * self.ha.write_handle(f) # <<<<<<<<<<<<<< @@ -34775,7 +34770,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_12write_binary(struct __pyx_obj_3_s */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->ha->__pyx_vtab)->write_handle(__pyx_v_self->ha, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":186 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":186 * self.sa.write_handle(f) * self.ha.write_handle(f) * fclose(f) # <<<<<<<<<<<<<< @@ -34811,7 +34806,7 @@ static PyObject *__pyx_pw_3_sa_11SuffixArray_15write_enhanced(PyObject *__pyx_v_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":188 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":188 * fclose(f) * * def write_enhanced(self, char* filename): # <<<<<<<<<<<<<< @@ -34843,7 +34838,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_14write_enhanced(struct __pyx_obj_3 int __pyx_clineno = 0; __Pyx_RefNannySetupContext("write_enhanced", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":189 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":189 * * def write_enhanced(self, char* filename): * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -34883,7 +34878,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_14write_enhanced(struct __pyx_obj_3 __pyx_v_f = __pyx_t_4; __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":190 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":190 * def write_enhanced(self, char* filename): * with open(filename, "w") as f: * self.darray.write_enhanced_handle(f) # <<<<<<<<<<<<<< @@ -34903,7 +34898,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_14write_enhanced(struct __pyx_obj_3 __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":191 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":191 * with open(filename, "w") as f: * self.darray.write_enhanced_handle(f) * for a_i in self.sa: # <<<<<<<<<<<<<< @@ -34948,7 +34943,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_14write_enhanced(struct __pyx_obj_3 __pyx_v_a_i = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":192 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":192 * self.darray.write_enhanced_handle(f) * for a_i in self.sa: * f.write("%d " % a_i) # <<<<<<<<<<<<<< @@ -34972,7 +34967,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_14write_enhanced(struct __pyx_obj_3 } __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":193 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":193 * for a_i in self.sa: * f.write("%d " % a_i) * f.write("\n") # <<<<<<<<<<<<<< @@ -34986,7 +34981,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_14write_enhanced(struct __pyx_obj_3 __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":194 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":194 * f.write("%d " % a_i) * f.write("\n") * for w_i in self.ha: # <<<<<<<<<<<<<< @@ -35031,7 +35026,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_14write_enhanced(struct __pyx_obj_3 __pyx_v_w_i = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":195 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":195 * f.write("\n") * for w_i in self.ha: * f.write("%d " % w_i) # <<<<<<<<<<<<<< @@ -35055,7 +35050,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_14write_enhanced(struct __pyx_obj_3 } __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":196 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":196 * for w_i in self.ha: * f.write("%d " % w_i) * f.write("\n") # <<<<<<<<<<<<<< @@ -35079,7 +35074,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_14write_enhanced(struct __pyx_obj_3 __Pyx_XDECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_XDECREF(__pyx_t_10); __pyx_t_10 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":189 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":189 * * def write_enhanced(self, char* filename): * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -35177,7 +35172,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_14write_enhanced(struct __pyx_obj_3 return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":198 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":198 * f.write("\n") * * cdef int __search_high(self, int word_id, int offset, int low, int high): # <<<<<<<<<<<<<< @@ -35192,7 +35187,7 @@ static int __pyx_f_3_sa_11SuffixArray___search_high(struct __pyx_obj_3_sa_Suffix int __pyx_t_1; __Pyx_RefNannySetupContext("__search_high", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":201 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":201 * cdef int midpoint * * if low >= high: # <<<<<<<<<<<<<< @@ -35202,7 +35197,7 @@ static int __pyx_f_3_sa_11SuffixArray___search_high(struct __pyx_obj_3_sa_Suffix __pyx_t_1 = (__pyx_v_low >= __pyx_v_high); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":202 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":202 * * if low >= high: * return high # <<<<<<<<<<<<<< @@ -35215,7 +35210,7 @@ static int __pyx_f_3_sa_11SuffixArray___search_high(struct __pyx_obj_3_sa_Suffix } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":203 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":203 * if low >= high: * return high * midpoint = (high + low) / 2 # <<<<<<<<<<<<<< @@ -35224,7 +35219,7 @@ static int __pyx_f_3_sa_11SuffixArray___search_high(struct __pyx_obj_3_sa_Suffix */ __pyx_v_midpoint = __Pyx_div_long((__pyx_v_high + __pyx_v_low), 2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":204 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":204 * return high * midpoint = (high + low) / 2 * if self.darray.data.arr[self.sa.arr[midpoint] + offset] == word_id: # <<<<<<<<<<<<<< @@ -35234,7 +35229,7 @@ static int __pyx_f_3_sa_11SuffixArray___search_high(struct __pyx_obj_3_sa_Suffix __pyx_t_1 = ((__pyx_v_self->darray->data->arr[((__pyx_v_self->sa->arr[__pyx_v_midpoint]) + __pyx_v_offset)]) == __pyx_v_word_id); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":205 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":205 * midpoint = (high + low) / 2 * if self.darray.data.arr[self.sa.arr[midpoint] + offset] == word_id: * return self.__search_high(word_id, offset, midpoint+1, high) # <<<<<<<<<<<<<< @@ -35247,7 +35242,7 @@ static int __pyx_f_3_sa_11SuffixArray___search_high(struct __pyx_obj_3_sa_Suffix } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":207 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":207 * return self.__search_high(word_id, offset, midpoint+1, high) * else: * return self.__search_high(word_id, offset, low, midpoint) # <<<<<<<<<<<<<< @@ -35265,7 +35260,7 @@ static int __pyx_f_3_sa_11SuffixArray___search_high(struct __pyx_obj_3_sa_Suffix return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":209 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":209 * return self.__search_high(word_id, offset, low, midpoint) * * cdef int __search_low(self, int word_id, int offset, int low, int high): # <<<<<<<<<<<<<< @@ -35280,7 +35275,7 @@ static int __pyx_f_3_sa_11SuffixArray___search_low(struct __pyx_obj_3_sa_SuffixA int __pyx_t_1; __Pyx_RefNannySetupContext("__search_low", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":212 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":212 * cdef int midpoint * * if low >= high: # <<<<<<<<<<<<<< @@ -35290,7 +35285,7 @@ static int __pyx_f_3_sa_11SuffixArray___search_low(struct __pyx_obj_3_sa_SuffixA __pyx_t_1 = (__pyx_v_low >= __pyx_v_high); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":213 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":213 * * if low >= high: * return high # <<<<<<<<<<<<<< @@ -35303,7 +35298,7 @@ static int __pyx_f_3_sa_11SuffixArray___search_low(struct __pyx_obj_3_sa_SuffixA } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":214 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":214 * if low >= high: * return high * midpoint = (high + low) / 2 # <<<<<<<<<<<<<< @@ -35312,7 +35307,7 @@ static int __pyx_f_3_sa_11SuffixArray___search_low(struct __pyx_obj_3_sa_SuffixA */ __pyx_v_midpoint = __Pyx_div_long((__pyx_v_high + __pyx_v_low), 2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":215 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":215 * return high * midpoint = (high + low) / 2 * if self.darray.data.arr[self.sa.arr[midpoint] + offset] == word_id: # <<<<<<<<<<<<<< @@ -35322,7 +35317,7 @@ static int __pyx_f_3_sa_11SuffixArray___search_low(struct __pyx_obj_3_sa_SuffixA __pyx_t_1 = ((__pyx_v_self->darray->data->arr[((__pyx_v_self->sa->arr[__pyx_v_midpoint]) + __pyx_v_offset)]) == __pyx_v_word_id); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":216 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":216 * midpoint = (high + low) / 2 * if self.darray.data.arr[self.sa.arr[midpoint] + offset] == word_id: * return self.__search_low(word_id, offset, low, midpoint) # <<<<<<<<<<<<<< @@ -35335,7 +35330,7 @@ static int __pyx_f_3_sa_11SuffixArray___search_low(struct __pyx_obj_3_sa_SuffixA } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":218 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":218 * return self.__search_low(word_id, offset, low, midpoint) * else: * return self.__search_low(word_id, offset, midpoint+1, high) # <<<<<<<<<<<<<< @@ -35353,7 +35348,7 @@ static int __pyx_f_3_sa_11SuffixArray___search_low(struct __pyx_obj_3_sa_SuffixA return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":220 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":220 * return self.__search_low(word_id, offset, midpoint+1, high) * * cdef __get_range(self, int word_id, int offset, int low, int high, int midpoint): # <<<<<<<<<<<<<< @@ -35372,7 +35367,7 @@ static PyObject *__pyx_f_3_sa_11SuffixArray___get_range(struct __pyx_obj_3_sa_Su int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__get_range", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":221 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":221 * * cdef __get_range(self, int word_id, int offset, int low, int high, int midpoint): * return (self.__search_low(word_id, offset, low, midpoint), # <<<<<<<<<<<<<< @@ -35383,7 +35378,7 @@ static PyObject *__pyx_f_3_sa_11SuffixArray___get_range(struct __pyx_obj_3_sa_Su __pyx_t_1 = PyInt_FromLong(((struct __pyx_vtabstruct_3_sa_SuffixArray *)__pyx_v_self->__pyx_vtab)->__pyx___search_low(__pyx_v_self, __pyx_v_word_id, __pyx_v_offset, __pyx_v_low, __pyx_v_midpoint)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[12]; __pyx_lineno = 221; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":222 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":222 * cdef __get_range(self, int word_id, int offset, int low, int high, int midpoint): * return (self.__search_low(word_id, offset, low, midpoint), * self.__search_high(word_id, offset, midpoint, high)) # <<<<<<<<<<<<<< @@ -35418,7 +35413,7 @@ static PyObject *__pyx_f_3_sa_11SuffixArray___get_range(struct __pyx_obj_3_sa_Su return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":224 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":224 * self.__search_high(word_id, offset, midpoint, high)) * * cdef __lookup_helper(self, int word_id, int offset, int low, int high): # <<<<<<<<<<<<<< @@ -35439,7 +35434,7 @@ static PyObject *__pyx_f_3_sa_11SuffixArray___lookup_helper(struct __pyx_obj_3_s int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__lookup_helper", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":227 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":227 * cdef int midpoint * * if offset == 0: # <<<<<<<<<<<<<< @@ -35449,7 +35444,7 @@ static PyObject *__pyx_f_3_sa_11SuffixArray___lookup_helper(struct __pyx_obj_3_s __pyx_t_1 = (__pyx_v_offset == 0); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":228 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":228 * * if offset == 0: * return (self.ha.arr[word_id], self.ha.arr[word_id+1]) # <<<<<<<<<<<<<< @@ -35476,7 +35471,7 @@ static PyObject *__pyx_f_3_sa_11SuffixArray___lookup_helper(struct __pyx_obj_3_s } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":229 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":229 * if offset == 0: * return (self.ha.arr[word_id], self.ha.arr[word_id+1]) * if low >= high: # <<<<<<<<<<<<<< @@ -35486,7 +35481,7 @@ static PyObject *__pyx_f_3_sa_11SuffixArray___lookup_helper(struct __pyx_obj_3_s __pyx_t_1 = (__pyx_v_low >= __pyx_v_high); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":230 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":230 * return (self.ha.arr[word_id], self.ha.arr[word_id+1]) * if low >= high: * return None # <<<<<<<<<<<<<< @@ -35501,7 +35496,7 @@ static PyObject *__pyx_f_3_sa_11SuffixArray___lookup_helper(struct __pyx_obj_3_s } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":232 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":232 * return None * * midpoint = (high + low) / 2 # <<<<<<<<<<<<<< @@ -35510,7 +35505,7 @@ static PyObject *__pyx_f_3_sa_11SuffixArray___lookup_helper(struct __pyx_obj_3_s */ __pyx_v_midpoint = __Pyx_div_long((__pyx_v_high + __pyx_v_low), 2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":233 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":233 * * midpoint = (high + low) / 2 * if self.darray.data.arr[self.sa.arr[midpoint] + offset] == word_id: # <<<<<<<<<<<<<< @@ -35520,7 +35515,7 @@ static PyObject *__pyx_f_3_sa_11SuffixArray___lookup_helper(struct __pyx_obj_3_s __pyx_t_1 = ((__pyx_v_self->darray->data->arr[((__pyx_v_self->sa->arr[__pyx_v_midpoint]) + __pyx_v_offset)]) == __pyx_v_word_id); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":234 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":234 * midpoint = (high + low) / 2 * if self.darray.data.arr[self.sa.arr[midpoint] + offset] == word_id: * return self.__get_range(word_id, offset, low, high, midpoint) # <<<<<<<<<<<<<< @@ -35537,7 +35532,7 @@ static PyObject *__pyx_f_3_sa_11SuffixArray___lookup_helper(struct __pyx_obj_3_s } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":235 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":235 * if self.darray.data.arr[self.sa.arr[midpoint] + offset] == word_id: * return self.__get_range(word_id, offset, low, high, midpoint) * if self.darray.data.arr[self.sa.arr[midpoint] + offset] > word_id: # <<<<<<<<<<<<<< @@ -35547,7 +35542,7 @@ static PyObject *__pyx_f_3_sa_11SuffixArray___lookup_helper(struct __pyx_obj_3_s __pyx_t_1 = ((__pyx_v_self->darray->data->arr[((__pyx_v_self->sa->arr[__pyx_v_midpoint]) + __pyx_v_offset)]) > __pyx_v_word_id); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":236 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":236 * return self.__get_range(word_id, offset, low, high, midpoint) * if self.darray.data.arr[self.sa.arr[midpoint] + offset] > word_id: * return self.__lookup_helper(word_id, offset, low, midpoint) # <<<<<<<<<<<<<< @@ -35564,7 +35559,7 @@ static PyObject *__pyx_f_3_sa_11SuffixArray___lookup_helper(struct __pyx_obj_3_s } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":238 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":238 * return self.__lookup_helper(word_id, offset, low, midpoint) * else: * return self.__lookup_helper(word_id, offset, midpoint+1, high) # <<<<<<<<<<<<<< @@ -35668,7 +35663,7 @@ static PyObject *__pyx_pw_3_sa_11SuffixArray_17lookup(PyObject *__pyx_v_self, Py return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":240 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":240 * return self.__lookup_helper(word_id, offset, midpoint+1, high) * * def lookup(self, word, int offset, int low, int high): # <<<<<<<<<<<<<< @@ -35689,7 +35684,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_16lookup(struct __pyx_obj_3_sa_Suff int __pyx_clineno = 0; __Pyx_RefNannySetupContext("lookup", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":242 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":242 * def lookup(self, word, int offset, int low, int high): * cdef int wordid * if low == -1: # <<<<<<<<<<<<<< @@ -35699,7 +35694,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_16lookup(struct __pyx_obj_3_sa_Suff __pyx_t_1 = (__pyx_v_low == -1); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":243 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":243 * cdef int wordid * if low == -1: * low = 0 # <<<<<<<<<<<<<< @@ -35711,7 +35706,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_16lookup(struct __pyx_obj_3_sa_Suff } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":244 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":244 * if low == -1: * low = 0 * if high == -1: # <<<<<<<<<<<<<< @@ -35721,7 +35716,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_16lookup(struct __pyx_obj_3_sa_Suff __pyx_t_1 = (__pyx_v_high == -1); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":245 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":245 * low = 0 * if high == -1: * high = len(self.sa) # <<<<<<<<<<<<<< @@ -35737,7 +35732,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_16lookup(struct __pyx_obj_3_sa_Suff } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":246 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":246 * if high == -1: * high = len(self.sa) * if word in self.darray.word2id: # <<<<<<<<<<<<<< @@ -35747,7 +35742,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_16lookup(struct __pyx_obj_3_sa_Suff __pyx_t_1 = (__Pyx_PySequence_Contains(__pyx_v_word, __pyx_v_self->darray->word2id, Py_EQ)); if (unlikely(__pyx_t_1 < 0)) {__pyx_filename = __pyx_f[12]; __pyx_lineno = 246; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":247 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":247 * high = len(self.sa) * if word in self.darray.word2id: * word_id = self.darray.word2id[word] # <<<<<<<<<<<<<< @@ -35759,7 +35754,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_16lookup(struct __pyx_obj_3_sa_Suff __pyx_v_word_id = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":248 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":248 * if word in self.darray.word2id: * word_id = self.darray.word2id[word] * return self.__lookup_helper(word_id, offset, low, high) # <<<<<<<<<<<<<< @@ -35777,7 +35772,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_16lookup(struct __pyx_obj_3_sa_Suff } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":250 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":250 * return self.__lookup_helper(word_id, offset, low, high) * else: * return None # <<<<<<<<<<<<<< @@ -35816,7 +35811,7 @@ static int __pyx_pw_3_sa_8TrieNode_1__cinit__(PyObject *__pyx_v_self, PyObject * return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":38 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":39 * cdef public children * * def __cinit__(self): # <<<<<<<<<<<<<< @@ -35833,14 +35828,14 @@ static int __pyx_pf_3_sa_8TrieNode___cinit__(struct __pyx_obj_3_sa_TrieNode *__p int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":39 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":40 * * def __cinit__(self): * self.children = {} # <<<<<<<<<<<<<< * * cdef class ExtendedTrieNode(TrieNode): */ - __pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 39; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 40; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_1)); __Pyx_GIVEREF(((PyObject *)__pyx_t_1)); __Pyx_GOTREF(__pyx_v_self->children); @@ -35870,7 +35865,7 @@ static PyObject *__pyx_pw_3_sa_8TrieNode_8children_1__get__(PyObject *__pyx_v_se return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":36 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":37 * * cdef class TrieNode: * cdef public children # <<<<<<<<<<<<<< @@ -35959,7 +35954,7 @@ static int __pyx_pw_3_sa_16ExtendedTrieNode_1__cinit__(PyObject *__pyx_v_self, P static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__phrase,&__pyx_n_s__phrase_location,&__pyx_n_s__suffix_link,0}; PyObject* values[3] = {0,0,0}; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":46 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":47 * cdef public suffix_link * * def __cinit__(self, phrase=None, phrase_location=None, suffix_link=None): # <<<<<<<<<<<<<< @@ -35998,7 +35993,7 @@ static int __pyx_pw_3_sa_16ExtendedTrieNode_1__cinit__(PyObject *__pyx_v_self, P } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "__cinit__") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 46; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "__cinit__") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 47; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } else { switch (PyTuple_GET_SIZE(__pyx_args)) { @@ -36015,7 +36010,7 @@ static int __pyx_pw_3_sa_16ExtendedTrieNode_1__cinit__(PyObject *__pyx_v_self, P } goto __pyx_L4_argument_unpacking_done; 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__pyx_lineno = 85; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "__cinit__") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 86; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } else { switch (PyTuple_GET_SIZE(__pyx_args)) { @@ -36840,35 +36835,35 @@ static int __pyx_pw_3_sa_14PhraseLocation_1__cinit__(PyObject *__pyx_v_self, PyO } } if (values[0]) { - __pyx_v_sa_low = __Pyx_PyInt_AsInt(values[0]); if (unlikely((__pyx_v_sa_low == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 85; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_sa_low = __Pyx_PyInt_AsInt(values[0]); if (unlikely((__pyx_v_sa_low == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 86; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { __pyx_v_sa_low = ((int)-1); } if (values[1]) { - __pyx_v_sa_high = __Pyx_PyInt_AsInt(values[1]); if (unlikely((__pyx_v_sa_high == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; 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goto __pyx_L3_error;} + __pyx_v_arr_high = __Pyx_PyInt_AsInt(values[3]); if (unlikely((__pyx_v_arr_high == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 86; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { __pyx_v_arr_high = ((int)-1); } __pyx_v_arr = values[4]; if (values[5]) { - __pyx_v_num_subpatterns = __Pyx_PyInt_AsInt(values[5]); if (unlikely((__pyx_v_num_subpatterns == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 86; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_num_subpatterns = __Pyx_PyInt_AsInt(values[5]); if (unlikely((__pyx_v_num_subpatterns == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 87; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { __pyx_v_num_subpatterns = ((int)1); } } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 0, 6, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 85; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 0, 6, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 86; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_L3_error:; __Pyx_AddTraceback("_sa.PhraseLocation.__cinit__", __pyx_clineno, __pyx_lineno, __pyx_filename); __Pyx_RefNannyFinishContext(); @@ -36879,7 +36874,7 @@ static int __pyx_pw_3_sa_14PhraseLocation_1__cinit__(PyObject *__pyx_v_self, PyO return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":85 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":86 * return 1 * * def __cinit__(self, int sa_low=-1, int sa_high=-1, int arr_low=-1, int arr_high=-1, # <<<<<<<<<<<<<< @@ -36895,7 +36890,7 @@ static int __pyx_pf_3_sa_14PhraseLocation___cinit__(struct __pyx_obj_3_sa_Phrase int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":87 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":88 * def __cinit__(self, int sa_low=-1, int sa_high=-1, int arr_low=-1, int arr_high=-1, * arr=None, int num_subpatterns=1): * self.sa_low = sa_low # <<<<<<<<<<<<<< @@ -36904,7 +36899,7 @@ static int __pyx_pf_3_sa_14PhraseLocation___cinit__(struct __pyx_obj_3_sa_Phrase */ __pyx_v_self->sa_low = __pyx_v_sa_low; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":88 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":89 * arr=None, int num_subpatterns=1): * self.sa_low = sa_low * self.sa_high = sa_high # <<<<<<<<<<<<<< @@ -36913,7 +36908,7 @@ static int __pyx_pf_3_sa_14PhraseLocation___cinit__(struct __pyx_obj_3_sa_Phrase */ __pyx_v_self->sa_high = __pyx_v_sa_high; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":89 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":90 * self.sa_low = sa_low * self.sa_high = sa_high * self.arr_low = arr_low # <<<<<<<<<<<<<< @@ -36922,7 +36917,7 @@ static int __pyx_pf_3_sa_14PhraseLocation___cinit__(struct __pyx_obj_3_sa_Phrase */ __pyx_v_self->arr_low = __pyx_v_arr_low; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":90 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":91 * self.sa_high = sa_high * self.arr_low = arr_low * self.arr_high = arr_high # <<<<<<<<<<<<<< @@ -36931,21 +36926,21 @@ static int __pyx_pf_3_sa_14PhraseLocation___cinit__(struct __pyx_obj_3_sa_Phrase */ __pyx_v_self->arr_high = __pyx_v_arr_high; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":91 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":92 * self.arr_low = arr_low * self.arr_high = arr_high * self.arr = arr # <<<<<<<<<<<<<< * self.num_subpatterns = num_subpatterns * */ - if (!(likely(((__pyx_v_arr) == Py_None) || likely(__Pyx_TypeTest(__pyx_v_arr, __pyx_ptype_3_sa_IntList))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 91; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_v_arr) == Py_None) || likely(__Pyx_TypeTest(__pyx_v_arr, __pyx_ptype_3_sa_IntList))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 92; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_INCREF(__pyx_v_arr); __Pyx_GIVEREF(__pyx_v_arr); __Pyx_GOTREF(__pyx_v_self->arr); __Pyx_DECREF(((PyObject *)__pyx_v_self->arr)); __pyx_v_self->arr = ((struct __pyx_obj_3_sa_IntList *)__pyx_v_arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":92 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":93 * self.arr_high = arr_high * self.arr = arr * self.num_subpatterns = num_subpatterns # <<<<<<<<<<<<<< @@ -36992,11 +36987,11 @@ static int __pyx_pw_3_sa_7Sampler_1__cinit__(PyObject *__pyx_v_self, PyObject *_ case 1: if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__fsarray)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("__cinit__", 1, 2, 2, 1); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 102; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("__cinit__", 1, 2, 2, 1); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 103; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "__cinit__") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 102; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "__cinit__") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 103; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } else if (PyTuple_GET_SIZE(__pyx_args) != 2) { goto __pyx_L5_argtuple_error; @@ -37004,18 +36999,18 @@ static int __pyx_pw_3_sa_7Sampler_1__cinit__(PyObject *__pyx_v_self, PyObject *_ values[0] = PyTuple_GET_ITEM(__pyx_args, 0); values[1] = PyTuple_GET_ITEM(__pyx_args, 1); } - __pyx_v_sample_size = __Pyx_PyInt_AsInt(values[0]); if (unlikely((__pyx_v_sample_size == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 102; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_sample_size = __Pyx_PyInt_AsInt(values[0]); if (unlikely((__pyx_v_sample_size == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 103; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_v_fsarray = ((struct __pyx_obj_3_sa_SuffixArray *)values[1]); } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("__cinit__", 1, 2, 2, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 102; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("__cinit__", 1, 2, 2, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 103; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_L3_error:; __Pyx_AddTraceback("_sa.Sampler.__cinit__", __pyx_clineno, __pyx_lineno, __pyx_filename); 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if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":106 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":107 * self.sa = fsarray.sa * if sample_size > 0: * logger.info("Sampling strategy: uniform, max sample size = %d", sample_size) # <<<<<<<<<<<<<< * else: * logger.info("Sampling strategy: no sampling") */ - __pyx_t_2 = __Pyx_GetName(__pyx_m, __pyx_n_s__logger); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 106; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = __Pyx_GetName(__pyx_m, __pyx_n_s__logger); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 107; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_3 = PyObject_GetAttr(__pyx_t_2, __pyx_n_s__info); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 106; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_GetAttr(__pyx_t_2, __pyx_n_s__info); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 107; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - __pyx_t_2 = PyInt_FromLong(__pyx_v_sample_size); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 106; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyInt_FromLong(__pyx_v_sample_size); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 107; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_4 = PyTuple_New(2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 106; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_New(2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 107; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_INCREF(((PyObject *)__pyx_kp_s_100)); PyTuple_SET_ITEM(__pyx_t_4, 0, ((PyObject *)__pyx_kp_s_100)); @@ -37099,7 +37094,7 @@ static int __pyx_pf_3_sa_7Sampler___cinit__(struct __pyx_obj_3_sa_Sampler *__pyx PyTuple_SET_ITEM(__pyx_t_4, 1, __pyx_t_2); __Pyx_GIVEREF(__pyx_t_2); __pyx_t_2 = 0; - __pyx_t_2 = PyObject_Call(__pyx_t_3, ((PyObject *)__pyx_t_4), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 106; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Call(__pyx_t_3, ((PyObject *)__pyx_t_4), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 107; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0; @@ -37108,19 +37103,19 @@ static int __pyx_pf_3_sa_7Sampler___cinit__(struct __pyx_obj_3_sa_Sampler *__pyx } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":108 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":109 * logger.info("Sampling strategy: uniform, max sample size = %d", sample_size) * else: * logger.info("Sampling strategy: no sampling") # <<<<<<<<<<<<<< * * def sample(self, PhraseLocation phrase_location): */ - __pyx_t_2 = __Pyx_GetName(__pyx_m, __pyx_n_s__logger); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = __Pyx_GetName(__pyx_m, __pyx_n_s__logger); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 109; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_4 = PyObject_GetAttr(__pyx_t_2, __pyx_n_s__info); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_GetAttr(__pyx_t_2, __pyx_n_s__info); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 109; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - __pyx_t_2 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_k_tuple_102), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_k_tuple_102), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 109; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; @@ -37147,7 +37142,7 @@ static PyObject *__pyx_pw_3_sa_7Sampler_3sample(PyObject *__pyx_v_self, PyObject PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("sample (wrapper)", 0); - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_phrase_location), __pyx_ptype_3_sa_PhraseLocation, 1, "phrase_location", 0))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 110; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_phrase_location), __pyx_ptype_3_sa_PhraseLocation, 1, "phrase_location", 0))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 111; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_r = __pyx_pf_3_sa_7Sampler_2sample(((struct __pyx_obj_3_sa_Sampler *)__pyx_v_self), ((struct __pyx_obj_3_sa_PhraseLocation *)__pyx_v_phrase_location)); goto __pyx_L0; __pyx_L1_error:; @@ -37157,7 +37152,7 @@ static PyObject *__pyx_pw_3_sa_7Sampler_3sample(PyObject *__pyx_v_self, PyObject return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":110 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":111 * logger.info("Sampling strategy: no sampling") * * def sample(self, PhraseLocation phrase_location): # <<<<<<<<<<<<<< @@ -37184,19 +37179,19 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("sample", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":123 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":124 * cdef int num_locations, val, j * * sample = IntList() # <<<<<<<<<<<<<< * if phrase_location.arr is None: * num_locations = phrase_location.sa_high - phrase_location.sa_low */ - __pyx_t_1 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_IntList)), ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 123; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_IntList)), ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 124; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_v_sample = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":124 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":125 * * sample = IntList() * if phrase_location.arr is None: # <<<<<<<<<<<<<< @@ -37206,7 +37201,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ __pyx_t_2 = (((PyObject *)__pyx_v_phrase_location->arr) == Py_None); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":125 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":126 * sample = IntList() * if phrase_location.arr is None: * num_locations = phrase_location.sa_high - phrase_location.sa_low # <<<<<<<<<<<<<< @@ -37215,7 +37210,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ */ __pyx_v_num_locations = (__pyx_v_phrase_location->sa_high - __pyx_v_phrase_location->sa_low); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":126 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":127 * if phrase_location.arr is None: * num_locations = phrase_location.sa_high - phrase_location.sa_low * if self.sample_size == -1 or num_locations <= self.sample_size: # <<<<<<<<<<<<<< @@ -37231,7 +37226,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ } if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":127 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":128 * num_locations = phrase_location.sa_high - phrase_location.sa_low * if self.sample_size == -1 or num_locations <= self.sample_size: * sample._extend_arr(self.sa.arr + phrase_location.sa_low, num_locations) # <<<<<<<<<<<<<< @@ -37243,7 +37238,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":129 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":130 * sample._extend_arr(self.sa.arr + phrase_location.sa_low, num_locations) * else: * stepsize = float(num_locations)/float(self.sample_size) # <<<<<<<<<<<<<< @@ -37252,11 +37247,11 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ */ if (unlikely(((double)__pyx_v_self->sample_size) == 0)) { PyErr_Format(PyExc_ZeroDivisionError, "float division"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 129; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 130; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_v_stepsize = (((double)__pyx_v_num_locations) / ((double)__pyx_v_self->sample_size)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":130 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":131 * else: * stepsize = float(num_locations)/float(self.sample_size) * i = phrase_location.sa_low # <<<<<<<<<<<<<< @@ -37265,7 +37260,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ */ __pyx_v_i = __pyx_v_phrase_location->sa_low; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":131 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":132 * stepsize = float(num_locations)/float(self.sample_size) * i = phrase_location.sa_low * while i < phrase_location.sa_high and sample.len < self.sample_size: # <<<<<<<<<<<<<< @@ -37282,7 +37277,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ } if (!__pyx_t_3) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":134 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":135 * '''Note: int(i) not guaranteed to have the desired * effect, according to the python documentation''' * if fmod(i,1.0) > 0.5: # <<<<<<<<<<<<<< @@ -37292,7 +37287,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ __pyx_t_3 = (fmod(__pyx_v_i, 1.0) > 0.5); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":135 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":136 * effect, according to the python documentation''' * if fmod(i,1.0) > 0.5: * val = int(ceil(i)) # <<<<<<<<<<<<<< @@ -37304,7 +37299,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":137 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":138 * val = int(ceil(i)) * else: * val = int(floor(i)) # <<<<<<<<<<<<<< @@ -37315,7 +37310,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ } __pyx_L7:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":138 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":139 * else: * val = int(floor(i)) * sample._append(self.sa.arr[val]) # <<<<<<<<<<<<<< @@ -37324,7 +37319,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_sample->__pyx_vtab)->_append(__pyx_v_sample, (__pyx_v_self->sa->arr[__pyx_v_val])); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":139 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":140 * val = int(floor(i)) * sample._append(self.sa.arr[val]) * i = i + stepsize # <<<<<<<<<<<<<< @@ -37339,7 +37334,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":141 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":142 * i = i + stepsize * else: * num_locations = (phrase_location.arr_high - phrase_location.arr_low) / phrase_location.num_subpatterns # <<<<<<<<<<<<<< @@ -37349,15 +37344,15 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ __pyx_t_5 = (__pyx_v_phrase_location->arr_high - __pyx_v_phrase_location->arr_low); if (unlikely(__pyx_v_phrase_location->num_subpatterns == 0)) { PyErr_Format(PyExc_ZeroDivisionError, "integer division or modulo by zero"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 141; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 142; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } else if (sizeof(int) == sizeof(long) && unlikely(__pyx_v_phrase_location->num_subpatterns == -1) && unlikely(UNARY_NEG_WOULD_OVERFLOW(__pyx_t_5))) { PyErr_Format(PyExc_OverflowError, "value too large to perform division"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 141; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 142; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_v_num_locations = __Pyx_div_int(__pyx_t_5, __pyx_v_phrase_location->num_subpatterns); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":142 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":143 * else: * num_locations = (phrase_location.arr_high - phrase_location.arr_low) / phrase_location.num_subpatterns * if self.sample_size == -1 or num_locations <= self.sample_size: # <<<<<<<<<<<<<< @@ -37373,7 +37368,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ } if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":143 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":144 * num_locations = (phrase_location.arr_high - phrase_location.arr_low) / phrase_location.num_subpatterns * if self.sample_size == -1 or num_locations <= self.sample_size: * sample = phrase_location.arr # <<<<<<<<<<<<<< @@ -37387,7 +37382,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":145 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":146 * sample = phrase_location.arr * else: * stepsize = float(num_locations)/float(self.sample_size) # <<<<<<<<<<<<<< @@ -37396,11 +37391,11 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ */ if (unlikely(((double)__pyx_v_self->sample_size) == 0)) { PyErr_Format(PyExc_ZeroDivisionError, "float division"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 145; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 146; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_v_stepsize = (((double)__pyx_v_num_locations) / ((double)__pyx_v_self->sample_size)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":146 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":147 * else: * stepsize = float(num_locations)/float(self.sample_size) * i = phrase_location.arr_low # <<<<<<<<<<<<<< @@ -37409,7 +37404,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ */ __pyx_v_i = __pyx_v_phrase_location->arr_low; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":147 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":148 * stepsize = float(num_locations)/float(self.sample_size) * i = phrase_location.arr_low * while i < num_locations and sample.len < self.sample_size * phrase_location.num_subpatterns: # <<<<<<<<<<<<<< @@ -37426,7 +37421,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ } if (!__pyx_t_4) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":150 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":151 * '''Note: int(i) not guaranteed to have the desired * effect, according to the python documentation''' * if fmod(i,1.0) > 0.5: # <<<<<<<<<<<<<< @@ -37436,7 +37431,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ __pyx_t_4 = (fmod(__pyx_v_i, 1.0) > 0.5); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":151 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":152 * effect, according to the python documentation''' * if fmod(i,1.0) > 0.5: * val = int(ceil(i)) # <<<<<<<<<<<<<< @@ -37448,7 +37443,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":153 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":154 * val = int(ceil(i)) * else: * val = int(floor(i)) # <<<<<<<<<<<<<< @@ -37459,7 +37454,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ } __pyx_L11:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":154 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":155 * else: * val = int(floor(i)) * j = phrase_location.arr_low + (val*phrase_location.num_subpatterns) # <<<<<<<<<<<<<< @@ -37468,7 +37463,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ */ __pyx_v_j = (__pyx_v_phrase_location->arr_low + (__pyx_v_val * __pyx_v_phrase_location->num_subpatterns)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":155 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":156 * val = int(floor(i)) * j = phrase_location.arr_low + (val*phrase_location.num_subpatterns) * sample._extend_arr(phrase_location.arr.arr + j, phrase_location.num_subpatterns) # <<<<<<<<<<<<<< @@ -37477,7 +37472,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_sample->__pyx_vtab)->_extend_arr(__pyx_v_sample, (__pyx_v_phrase_location->arr->arr + __pyx_v_j), __pyx_v_phrase_location->num_subpatterns); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":156 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":157 * j = phrase_location.arr_low + (val*phrase_location.num_subpatterns) * sample._extend_arr(phrase_location.arr.arr + j, phrase_location.num_subpatterns) * i = i + stepsize # <<<<<<<<<<<<<< @@ -37491,7 +37486,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":157 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":158 * sample._extend_arr(phrase_location.arr.arr + j, phrase_location.num_subpatterns) * i = i + stepsize * return sample # <<<<<<<<<<<<<< @@ -37516,7 +37511,7 @@ static PyObject *__pyx_pf_3_sa_7Sampler_2sample(struct __pyx_obj_3_sa_Sampler *_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":169 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":170 * * * cdef void assign_matching(Matching* m, int* arr, int start, int step, int* sent_id_arr): # <<<<<<<<<<<<<< @@ -37528,7 +37523,7 @@ static void __pyx_f_3_sa_assign_matching(struct __pyx_t_3_sa_Matching *__pyx_v_m __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("assign_matching", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":170 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":171 * * cdef void assign_matching(Matching* m, int* arr, int start, int step, int* sent_id_arr): * m.arr = arr # <<<<<<<<<<<<<< @@ -37537,7 +37532,7 @@ static void __pyx_f_3_sa_assign_matching(struct __pyx_t_3_sa_Matching *__pyx_v_m */ __pyx_v_m->arr = __pyx_v_arr; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":171 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":172 * cdef void assign_matching(Matching* m, int* arr, int start, int step, int* sent_id_arr): * m.arr = arr * m.start = start # <<<<<<<<<<<<<< @@ -37546,7 +37541,7 @@ static void __pyx_f_3_sa_assign_matching(struct __pyx_t_3_sa_Matching *__pyx_v_m */ __pyx_v_m->start = __pyx_v_start; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":172 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":173 * m.arr = arr * m.start = start * m.end = start + step # <<<<<<<<<<<<<< @@ -37555,7 +37550,7 @@ static void __pyx_f_3_sa_assign_matching(struct __pyx_t_3_sa_Matching *__pyx_v_m */ __pyx_v_m->end = (__pyx_v_start + __pyx_v_step); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":173 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":174 * m.start = start * m.end = start + step * m.sent_id = sent_id_arr[arr[start]] # <<<<<<<<<<<<<< @@ -37564,7 +37559,7 @@ static void __pyx_f_3_sa_assign_matching(struct __pyx_t_3_sa_Matching *__pyx_v_m */ __pyx_v_m->sent_id = (__pyx_v_sent_id_arr[(__pyx_v_arr[__pyx_v_start])]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":174 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":175 * m.end = start + step * m.sent_id = sent_id_arr[arr[start]] * m.size = step # <<<<<<<<<<<<<< @@ -37576,7 +37571,7 @@ static void __pyx_f_3_sa_assign_matching(struct __pyx_t_3_sa_Matching *__pyx_v_m __Pyx_RefNannyFinishContext(); } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":177 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":178 * * * cdef int* append_combined_matching(int* arr, Matching* loc1, Matching* loc2, # <<<<<<<<<<<<<< @@ -37593,7 +37588,7 @@ static int *__pyx_f_3_sa_append_combined_matching(int *__pyx_v_arr, struct __pyx int __pyx_t_2; __Pyx_RefNannySetupContext("append_combined_matching", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":181 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":182 * cdef int i, new_len * * new_len = result_len[0] + num_subpatterns # <<<<<<<<<<<<<< @@ -37602,7 +37597,7 @@ static int *__pyx_f_3_sa_append_combined_matching(int *__pyx_v_arr, struct __pyx */ __pyx_v_new_len = ((__pyx_v_result_len[0]) + __pyx_v_num_subpatterns); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":182 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":183 * * new_len = result_len[0] + num_subpatterns * arr = <int*> realloc(arr, new_len*sizeof(int)) # <<<<<<<<<<<<<< @@ -37611,7 +37606,7 @@ static int *__pyx_f_3_sa_append_combined_matching(int *__pyx_v_arr, struct __pyx */ __pyx_v_arr = ((int *)realloc(__pyx_v_arr, (__pyx_v_new_len * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":184 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":185 * arr = <int*> realloc(arr, new_len*sizeof(int)) * * for i from 0 <= i < loc1.size: # <<<<<<<<<<<<<< @@ -37621,7 +37616,7 @@ static int *__pyx_f_3_sa_append_combined_matching(int *__pyx_v_arr, struct __pyx __pyx_t_1 = __pyx_v_loc1->size; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_1; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":185 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":186 * * for i from 0 <= i < loc1.size: * arr[result_len[0]+i] = loc1.arr[loc1.start+i] # <<<<<<<<<<<<<< @@ -37631,7 +37626,7 @@ static int *__pyx_f_3_sa_append_combined_matching(int *__pyx_v_arr, struct __pyx (__pyx_v_arr[((__pyx_v_result_len[0]) + __pyx_v_i)]) = (__pyx_v_loc1->arr[(__pyx_v_loc1->start + __pyx_v_i)]); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":186 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":187 * for i from 0 <= i < loc1.size: * arr[result_len[0]+i] = loc1.arr[loc1.start+i] * if num_subpatterns > loc1.size: # <<<<<<<<<<<<<< @@ -37641,7 +37636,7 @@ static int *__pyx_f_3_sa_append_combined_matching(int *__pyx_v_arr, struct __pyx __pyx_t_2 = (__pyx_v_num_subpatterns > __pyx_v_loc1->size); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":187 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":188 * arr[result_len[0]+i] = loc1.arr[loc1.start+i] * if num_subpatterns > loc1.size: * arr[new_len-1] = loc2.arr[loc2.end-1] # <<<<<<<<<<<<<< @@ -37653,7 +37648,7 @@ static int *__pyx_f_3_sa_append_combined_matching(int *__pyx_v_arr, struct __pyx } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":188 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":189 * if num_subpatterns > loc1.size: * arr[new_len-1] = loc2.arr[loc2.end-1] * result_len[0] = new_len # <<<<<<<<<<<<<< @@ -37662,7 +37657,7 @@ static int *__pyx_f_3_sa_append_combined_matching(int *__pyx_v_arr, struct __pyx */ (__pyx_v_result_len[0]) = __pyx_v_new_len; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":189 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":190 * arr[new_len-1] = loc2.arr[loc2.end-1] * result_len[0] = new_len * return arr # <<<<<<<<<<<<<< @@ -37678,7 +37673,7 @@ static int *__pyx_f_3_sa_append_combined_matching(int *__pyx_v_arr, struct __pyx return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":192 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":193 * * * cdef int* extend_arr(int* arr, int* arr_len, int* appendix, int appendix_len): # <<<<<<<<<<<<<< @@ -37692,7 +37687,7 @@ static int *__pyx_f_3_sa_extend_arr(int *__pyx_v_arr, int *__pyx_v_arr_len, int __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("extend_arr", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":195 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":196 * cdef int new_len * * new_len = arr_len[0] + appendix_len # <<<<<<<<<<<<<< @@ -37701,7 +37696,7 @@ static int *__pyx_f_3_sa_extend_arr(int *__pyx_v_arr, int *__pyx_v_arr_len, int */ __pyx_v_new_len = ((__pyx_v_arr_len[0]) + __pyx_v_appendix_len); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":196 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":197 * * new_len = arr_len[0] + appendix_len * arr = <int*> realloc(arr, new_len*sizeof(int)) # <<<<<<<<<<<<<< @@ -37710,7 +37705,7 @@ static int *__pyx_f_3_sa_extend_arr(int *__pyx_v_arr, int *__pyx_v_arr_len, int */ __pyx_v_arr = ((int *)realloc(__pyx_v_arr, (__pyx_v_new_len * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":197 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":198 * new_len = arr_len[0] + appendix_len * arr = <int*> realloc(arr, new_len*sizeof(int)) * memcpy(arr+arr_len[0], appendix, appendix_len*sizeof(int)) # <<<<<<<<<<<<<< @@ -37719,7 +37714,7 @@ static int *__pyx_f_3_sa_extend_arr(int *__pyx_v_arr, int *__pyx_v_arr_len, int */ memcpy((__pyx_v_arr + (__pyx_v_arr_len[0])), __pyx_v_appendix, (__pyx_v_appendix_len * (sizeof(int)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":198 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":199 * arr = <int*> realloc(arr, new_len*sizeof(int)) * memcpy(arr+arr_len[0], appendix, appendix_len*sizeof(int)) * arr_len[0] = new_len # <<<<<<<<<<<<<< @@ -37728,7 +37723,7 @@ static int *__pyx_f_3_sa_extend_arr(int *__pyx_v_arr, int *__pyx_v_arr_len, int */ (__pyx_v_arr_len[0]) = __pyx_v_new_len; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":199 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":200 * memcpy(arr+arr_len[0], appendix, appendix_len*sizeof(int)) * arr_len[0] = new_len * return arr # <<<<<<<<<<<<<< @@ -37744,7 +37739,7 @@ static int *__pyx_f_3_sa_extend_arr(int *__pyx_v_arr, int *__pyx_v_arr_len, int return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":201 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":202 * return arr * * cdef int median(int low, int high, int step): # <<<<<<<<<<<<<< @@ -37761,7 +37756,7 @@ static int __pyx_f_3_sa_median(int __pyx_v_low, int __pyx_v_high, int __pyx_v_st int __pyx_clineno = 0; __Pyx_RefNannySetupContext("median", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":202 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":203 * * cdef int median(int low, int high, int step): * return low + (((high - low)/step)/2)*step # <<<<<<<<<<<<<< @@ -37771,11 +37766,11 @@ static int __pyx_f_3_sa_median(int __pyx_v_low, int __pyx_v_high, int __pyx_v_st __pyx_t_1 = (__pyx_v_high - __pyx_v_low); if (unlikely(__pyx_v_step == 0)) { PyErr_Format(PyExc_ZeroDivisionError, "integer division or modulo by zero"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 202; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 203; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } else if (sizeof(int) == sizeof(long) && unlikely(__pyx_v_step == -1) && unlikely(UNARY_NEG_WOULD_OVERFLOW(__pyx_t_1))) { PyErr_Format(PyExc_OverflowError, "value too large to perform division"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 202; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 203; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_r = (__pyx_v_low + (__Pyx_div_long(__Pyx_div_int(__pyx_t_1, __pyx_v_step), 2) * __pyx_v_step)); goto __pyx_L0; @@ -37790,7 +37785,7 @@ static int __pyx_f_3_sa_median(int __pyx_v_low, int __pyx_v_high, int __pyx_v_st return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":205 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":206 * * * cdef void find_comparable_matchings(int low, int high, int* arr, int step, int loc, int* loc_minus, int* loc_plus): # <<<<<<<<<<<<<< @@ -37805,7 +37800,7 @@ static void __pyx_f_3_sa_find_comparable_matchings(int __pyx_v_low, int __pyx_v_ int __pyx_t_3; __Pyx_RefNannySetupContext("find_comparable_matchings", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":209 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":210 * # in which all matchings have the same first index as the one * # starting at loc * loc_plus[0] = loc + step # <<<<<<<<<<<<<< @@ -37814,7 +37809,7 @@ static void __pyx_f_3_sa_find_comparable_matchings(int __pyx_v_low, int __pyx_v_ */ (__pyx_v_loc_plus[0]) = (__pyx_v_loc + __pyx_v_step); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":210 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":211 * # starting at loc * loc_plus[0] = loc + step * while loc_plus[0] < high and arr[loc_plus[0]] == arr[loc]: # <<<<<<<<<<<<<< @@ -37831,7 +37826,7 @@ static void __pyx_f_3_sa_find_comparable_matchings(int __pyx_v_low, int __pyx_v_ } if (!__pyx_t_3) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":211 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":212 * loc_plus[0] = loc + step * while loc_plus[0] < high and arr[loc_plus[0]] == arr[loc]: * loc_plus[0] = loc_plus[0] + step # <<<<<<<<<<<<<< @@ -37841,7 +37836,7 @@ static void __pyx_f_3_sa_find_comparable_matchings(int __pyx_v_low, int __pyx_v_ (__pyx_v_loc_plus[0]) = ((__pyx_v_loc_plus[0]) + __pyx_v_step); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":212 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":213 * while loc_plus[0] < high and arr[loc_plus[0]] == arr[loc]: * loc_plus[0] = loc_plus[0] + step * loc_minus[0] = loc # <<<<<<<<<<<<<< @@ -37850,7 +37845,7 @@ static void __pyx_f_3_sa_find_comparable_matchings(int __pyx_v_low, int __pyx_v_ */ (__pyx_v_loc_minus[0]) = __pyx_v_loc; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":213 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":214 * loc_plus[0] = loc_plus[0] + step * loc_minus[0] = loc * while loc_minus[0]-step >= low and arr[loc_minus[0]-step] == arr[loc]: # <<<<<<<<<<<<<< @@ -37867,7 +37862,7 @@ static void __pyx_f_3_sa_find_comparable_matchings(int __pyx_v_low, int __pyx_v_ } if (!__pyx_t_2) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":214 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":215 * loc_minus[0] = loc * while loc_minus[0]-step >= low and arr[loc_minus[0]-step] == arr[loc]: * loc_minus[0] = loc_minus[0] - step # <<<<<<<<<<<<<< @@ -37911,7 +37906,7 @@ static int __pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(PyObject *__pyx_v_ static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__alignment,&__pyx_n_s__by_slack_factor,&__pyx_n_s__category,&__pyx_n_s__max_chunks,&__pyx_n_s__max_initial_size,&__pyx_n_s__max_length,&__pyx_n_s__max_nonterminals,&__pyx_n_s__max_target_chunks,&__pyx_n_s__max_target_length,&__pyx_n_s__min_gap_size,&__pyx_n_s__precompute_file,&__pyx_n_s_70,&__pyx_n_s__precompute_rank,&__pyx_n_s_103,&__pyx_n_s_104,&__pyx_n_s_71,&__pyx_n_s__train_min_gap_size,&__pyx_n_s__tight_phrases,&__pyx_n_s__use_baeza_yates,&__pyx_n_s__use_collocations,&__pyx_n_s__use_index,0}; PyObject* values[21] = {0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0}; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":274 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":275 * char* category="[X]", * # maximum number of contiguous chunks of terminal symbols in RHS of a rule. If None, defaults to max_nonterminals+1 * max_chunks=None, # <<<<<<<<<<<<<< @@ -37920,7 +37915,7 @@ static int __pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(PyObject *__pyx_v_ */ values[3] = ((PyObject *)Py_None); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":282 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":283 * unsigned max_nonterminals=2, * # maximum number of contiguous chunks of terminal symbols in target-side RHS of a rule. If None, defaults to max_nonterminals+1 * max_target_chunks=None, # <<<<<<<<<<<<<< @@ -37929,7 +37924,7 @@ static int __pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(PyObject *__pyx_v_ */ values[7] = ((PyObject *)Py_None); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":284 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":285 * max_target_chunks=None, * # maximum number of target side symbols (both T and NT) allowed in a rule. If None, defaults to max_initial_size * max_target_length=None, # <<<<<<<<<<<<<< @@ -37938,7 +37933,7 @@ static int __pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(PyObject *__pyx_v_ */ values[8] = ((PyObject *)Py_None); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":288 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":289 * unsigned min_gap_size=2, * # filename of file containing precomputed collocations * precompute_file=None, # <<<<<<<<<<<<<< @@ -38081,7 +38076,7 @@ static int __pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(PyObject *__pyx_v_ } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "__cinit__") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 266; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "__cinit__") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 267; 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} if (values[5]) { - __pyx_v_max_length = __Pyx_PyInt_AsUnsignedInt(values[5]); if (unlikely((__pyx_v_max_length == (unsigned int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 278; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_max_length = __Pyx_PyInt_AsUnsignedInt(values[5]); if (unlikely((__pyx_v_max_length == (unsigned int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 279; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { __pyx_v_max_length = ((unsigned int)5); } if (values[6]) { - __pyx_v_max_nonterminals = __Pyx_PyInt_AsUnsignedInt(values[6]); if (unlikely((__pyx_v_max_nonterminals == (unsigned int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 280; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_max_nonterminals = __Pyx_PyInt_AsUnsignedInt(values[6]); if (unlikely((__pyx_v_max_nonterminals == (unsigned int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 281; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { __pyx_v_max_nonterminals = ((unsigned int)2); } __pyx_v_max_target_chunks = values[7]; __pyx_v_max_target_length = values[8]; if (values[9]) { - __pyx_v_min_gap_size = __Pyx_PyInt_AsUnsignedInt(values[9]); if (unlikely((__pyx_v_min_gap_size == (unsigned int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 286; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_min_gap_size = __Pyx_PyInt_AsUnsignedInt(values[9]); if (unlikely((__pyx_v_min_gap_size == (unsigned int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 287; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { __pyx_v_min_gap_size = ((unsigned int)2); } __pyx_v_precompute_file = values[10]; if (values[11]) { - __pyx_v_precompute_secondary_rank = __Pyx_PyInt_AsUnsignedInt(values[11]); if (unlikely((__pyx_v_precompute_secondary_rank == (unsigned int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 290; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_precompute_secondary_rank = __Pyx_PyInt_AsUnsignedInt(values[11]); if (unlikely((__pyx_v_precompute_secondary_rank == (unsigned int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 291; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { __pyx_v_precompute_secondary_rank = ((unsigned int)20); } if (values[12]) { - __pyx_v_precompute_rank = __Pyx_PyInt_AsUnsignedInt(values[12]); if (unlikely((__pyx_v_precompute_rank == (unsigned int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 292; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_precompute_rank = __Pyx_PyInt_AsUnsignedInt(values[12]); if (unlikely((__pyx_v_precompute_rank == (unsigned int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 293; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { __pyx_v_precompute_rank = ((unsigned int)100); } if (values[13]) { - __pyx_v_require_aligned_terminal = __Pyx_PyObject_IsTrue(values[13]); if (unlikely((__pyx_v_require_aligned_terminal == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 294; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_require_aligned_terminal = __Pyx_PyObject_IsTrue(values[13]); if (unlikely((__pyx_v_require_aligned_terminal == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 295; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":294 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":295 * unsigned precompute_rank=100, * # require extracted rules to have at least one aligned word * bint require_aligned_terminal=True, # <<<<<<<<<<<<<< @@ -38177,10 +38172,10 @@ static int __pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(PyObject *__pyx_v_ __pyx_v_require_aligned_terminal = ((int)1); } if (values[14]) { - __pyx_v_require_aligned_chunks = __Pyx_PyObject_IsTrue(values[14]); if (unlikely((__pyx_v_require_aligned_chunks == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 296; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_require_aligned_chunks = __Pyx_PyObject_IsTrue(values[14]); if (unlikely((__pyx_v_require_aligned_chunks == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 297; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":296 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":297 * bint require_aligned_terminal=True, * # require each contiguous chunk of extracted rules to have at least one aligned word * bint require_aligned_chunks=False, # <<<<<<<<<<<<<< @@ -38190,20 +38185,20 @@ static int __pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(PyObject *__pyx_v_ __pyx_v_require_aligned_chunks = ((int)0); } if (values[15]) { - __pyx_v_train_max_initial_size = __Pyx_PyInt_AsUnsignedInt(values[15]); if (unlikely((__pyx_v_train_max_initial_size == (unsigned int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 298; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_train_max_initial_size = __Pyx_PyInt_AsUnsignedInt(values[15]); if (unlikely((__pyx_v_train_max_initial_size == (unsigned int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 299; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { __pyx_v_train_max_initial_size = ((unsigned int)10); } if (values[16]) { - __pyx_v_train_min_gap_size = __Pyx_PyInt_AsUnsignedInt(values[16]); if (unlikely((__pyx_v_train_min_gap_size == (unsigned int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 300; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_train_min_gap_size = __Pyx_PyInt_AsUnsignedInt(values[16]); if (unlikely((__pyx_v_train_min_gap_size == (unsigned int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 301; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { __pyx_v_train_min_gap_size = ((unsigned int)2); } if (values[17]) { - __pyx_v_tight_phrases = __Pyx_PyObject_IsTrue(values[17]); if (unlikely((__pyx_v_tight_phrases == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 302; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_tight_phrases = __Pyx_PyObject_IsTrue(values[17]); if (unlikely((__pyx_v_tight_phrases == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 303; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":302 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":303 * unsigned train_min_gap_size=2, * # True if phrases should be tight, False otherwise (False == slower but better results) * bint tight_phrases=False, # <<<<<<<<<<<<<< @@ -38213,10 +38208,10 @@ static int __pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(PyObject *__pyx_v_ __pyx_v_tight_phrases = ((int)0); } if (values[18]) { - __pyx_v_use_baeza_yates = __Pyx_PyObject_IsTrue(values[18]); if (unlikely((__pyx_v_use_baeza_yates == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 304; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_use_baeza_yates = __Pyx_PyObject_IsTrue(values[18]); if (unlikely((__pyx_v_use_baeza_yates == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 305; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":304 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":305 * bint tight_phrases=False, * # True to require use of double-binary alg, false otherwise * bint use_baeza_yates=True, # <<<<<<<<<<<<<< @@ -38226,10 +38221,10 @@ static int __pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(PyObject *__pyx_v_ __pyx_v_use_baeza_yates = ((int)1); } if (values[19]) { - __pyx_v_use_collocations = __Pyx_PyObject_IsTrue(values[19]); if (unlikely((__pyx_v_use_collocations == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 306; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_use_collocations = __Pyx_PyObject_IsTrue(values[19]); if (unlikely((__pyx_v_use_collocations == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 307; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":306 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":307 * bint use_baeza_yates=True, * # True to enable used of precomputed collocations * bint use_collocations=True, # <<<<<<<<<<<<<< @@ -38239,10 +38234,10 @@ static int __pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(PyObject *__pyx_v_ __pyx_v_use_collocations = ((int)1); } if (values[20]) { - __pyx_v_use_index = __Pyx_PyObject_IsTrue(values[20]); if (unlikely((__pyx_v_use_index == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 308; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_use_index = __Pyx_PyObject_IsTrue(values[20]); if (unlikely((__pyx_v_use_index == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 309; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":308 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":309 * bint use_collocations=True, * # True to enable use of precomputed inverted indices * bint use_index=True): # <<<<<<<<<<<<<< @@ -38254,13 +38249,13 @@ static int __pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(PyObject *__pyx_v_ } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 1, 21, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 266; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 1, 21, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 267; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_L3_error:; __Pyx_AddTraceback("_sa.HieroCachingRuleFactory.__cinit__", __pyx_clineno, __pyx_lineno, __pyx_filename); __Pyx_RefNannyFinishContext(); return -1; __pyx_L4_argument_unpacking_done:; - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_alignment), __pyx_ptype_3_sa_Alignment, 1, "alignment", 0))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 268; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_alignment), __pyx_ptype_3_sa_Alignment, 1, "alignment", 0))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 269; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_r = __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(((struct __pyx_obj_3_sa_HieroCachingRuleFactory *)__pyx_v_self), __pyx_v_alignment, __pyx_v_by_slack_factor, __pyx_v_category, __pyx_v_max_chunks, __pyx_v_max_initial_size, __pyx_v_max_length, __pyx_v_max_nonterminals, __pyx_v_max_target_chunks, __pyx_v_max_target_length, __pyx_v_min_gap_size, __pyx_v_precompute_file, __pyx_v_precompute_secondary_rank, __pyx_v_precompute_rank, __pyx_v_require_aligned_terminal, __pyx_v_require_aligned_chunks, __pyx_v_train_max_initial_size, __pyx_v_train_min_gap_size, __pyx_v_tight_phrases, __pyx_v_use_baeza_yates, __pyx_v_use_collocations, __pyx_v_use_index); goto __pyx_L0; __pyx_L1_error:; @@ -38270,7 +38265,7 @@ static int __pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(PyObject *__pyx_v_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":266 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":267 * cdef IntList findexes1 * * def __cinit__(self, # <<<<<<<<<<<<<< @@ -38290,21 +38285,21 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":314 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":315 * respectively. This is because Chiang's model does not require * them to be the same, therefore we don't either.''' * self.rules = TrieTable(True) # cache # <<<<<<<<<<<<<< * self.rules.root = ExtendedTrieNode(phrase_location=PhraseLocation()) * if alignment is None: */ - __pyx_t_1 = __Pyx_PyBool_FromLong(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 314; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyBool_FromLong(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 315; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_2 = PyTuple_New(1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 314; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyTuple_New(1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 315; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); PyTuple_SET_ITEM(__pyx_t_2, 0, __pyx_t_1); __Pyx_GIVEREF(__pyx_t_1); __pyx_t_1 = 0; - __pyx_t_1 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_TrieTable)), ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 314; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_TrieTable)), ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 315; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; __Pyx_GIVEREF(__pyx_t_1); @@ -38313,20 +38308,20 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ __pyx_v_self->rules = ((struct __pyx_obj_3_sa_TrieTable *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":315 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":316 * them to be the same, therefore we don't either.''' * self.rules = TrieTable(True) # cache * self.rules.root = ExtendedTrieNode(phrase_location=PhraseLocation()) # <<<<<<<<<<<<<< * if alignment is None: * raise Exception("Must specify an alignment object") */ - __pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 315; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 316; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_1)); - __pyx_t_2 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_PhraseLocation)), ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 315; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_PhraseLocation)), ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 316; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - if (PyDict_SetItem(__pyx_t_1, ((PyObject *)__pyx_n_s__phrase_location), __pyx_t_2) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 315; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_1, ((PyObject *)__pyx_n_s__phrase_location), __pyx_t_2) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 316; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - __pyx_t_2 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_ExtendedTrieNode)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_1)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 315; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_ExtendedTrieNode)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_1)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 316; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; __Pyx_GIVEREF(__pyx_t_2); @@ -38335,7 +38330,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ __pyx_v_self->rules->root = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":316 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":317 * self.rules = TrieTable(True) # cache * self.rules.root = ExtendedTrieNode(phrase_location=PhraseLocation()) * if alignment is None: # <<<<<<<<<<<<<< @@ -38345,23 +38340,23 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ __pyx_t_3 = (((PyObject *)__pyx_v_alignment) == Py_None); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":317 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":318 * self.rules.root = ExtendedTrieNode(phrase_location=PhraseLocation()) * if alignment is None: * raise Exception("Must specify an alignment object") # <<<<<<<<<<<<<< * self.alignment = alignment * */ - __pyx_t_2 = PyObject_Call(__pyx_builtin_Exception, ((PyObject *)__pyx_k_tuple_107), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 317; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Call(__pyx_builtin_Exception, ((PyObject *)__pyx_k_tuple_107), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 318; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_Raise(__pyx_t_2, 0, 0, 0); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 317; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 318; __pyx_clineno = __LINE__; goto __pyx_L1_error;} goto __pyx_L3; } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":318 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":319 * if alignment is None: * raise Exception("Must specify an alignment object") * self.alignment = alignment # <<<<<<<<<<<<<< @@ -38374,7 +38369,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ __Pyx_DECREF(((PyObject *)__pyx_v_self->alignment)); __pyx_v_self->alignment = __pyx_v_alignment; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":322 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":323 * # grammar parameters and settings * # NOTE: setting max_nonterminals > 2 is not currently supported in Hiero * self.max_length = max_length # <<<<<<<<<<<<<< @@ -38383,7 +38378,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ __pyx_v_self->max_length = __pyx_v_max_length; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":323 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":324 * # NOTE: setting max_nonterminals > 2 is not currently supported in Hiero * self.max_length = max_length * self.max_nonterminals = max_nonterminals # <<<<<<<<<<<<<< @@ -38392,7 +38387,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ __pyx_v_self->max_nonterminals = __pyx_v_max_nonterminals; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":324 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":325 * self.max_length = max_length * self.max_nonterminals = max_nonterminals * self.max_initial_size = max_initial_size # <<<<<<<<<<<<<< @@ -38401,7 +38396,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ __pyx_v_self->max_initial_size = __pyx_v_max_initial_size; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":325 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":326 * self.max_nonterminals = max_nonterminals * self.max_initial_size = max_initial_size * self.train_max_initial_size = train_max_initial_size # <<<<<<<<<<<<<< @@ -38410,7 +38405,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ __pyx_v_self->train_max_initial_size = __pyx_v_train_max_initial_size; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":326 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":327 * self.max_initial_size = max_initial_size * self.train_max_initial_size = train_max_initial_size * self.min_gap_size = min_gap_size # <<<<<<<<<<<<<< @@ -38419,7 +38414,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ __pyx_v_self->min_gap_size = __pyx_v_min_gap_size; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":327 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":328 * self.train_max_initial_size = train_max_initial_size * self.min_gap_size = min_gap_size * self.train_min_gap_size = train_min_gap_size # <<<<<<<<<<<<<< @@ -38428,7 +38423,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ __pyx_v_self->train_min_gap_size = __pyx_v_train_min_gap_size; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":328 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":329 * self.min_gap_size = min_gap_size * self.train_min_gap_size = train_min_gap_size * self.category = sym_fromstring(category, False) # <<<<<<<<<<<<<< @@ -38437,7 +38432,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ __pyx_v_self->category = __pyx_f_3_sa_sym_fromstring(__pyx_v_category, 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":330 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":331 * self.category = sym_fromstring(category, False) * * if max_chunks is None: # <<<<<<<<<<<<<< @@ -38447,7 +38442,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ __pyx_t_3 = (__pyx_v_max_chunks == Py_None); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":331 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":332 * * if max_chunks is None: * self.max_chunks = self.max_nonterminals + 1 # <<<<<<<<<<<<<< @@ -38459,19 +38454,19 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":333 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":334 * self.max_chunks = self.max_nonterminals + 1 * else: * self.max_chunks = max_chunks # <<<<<<<<<<<<<< * * if max_target_chunks is None: */ - __pyx_t_4 = __Pyx_PyInt_AsInt(__pyx_v_max_chunks); if (unlikely((__pyx_t_4 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 333; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = __Pyx_PyInt_AsInt(__pyx_v_max_chunks); if (unlikely((__pyx_t_4 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 334; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_self->max_chunks = __pyx_t_4; } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":335 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":336 * self.max_chunks = max_chunks * * if max_target_chunks is None: # <<<<<<<<<<<<<< @@ -38481,7 +38476,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ __pyx_t_3 = (__pyx_v_max_target_chunks == Py_None); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":336 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":337 * * if max_target_chunks is None: * self.max_target_chunks = self.max_nonterminals + 1 # <<<<<<<<<<<<<< @@ -38493,19 +38488,19 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":338 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":339 * self.max_target_chunks = self.max_nonterminals + 1 * else: * self.max_target_chunks = max_target_chunks # <<<<<<<<<<<<<< * * if max_target_length is None: */ - __pyx_t_4 = __Pyx_PyInt_AsInt(__pyx_v_max_target_chunks); if (unlikely((__pyx_t_4 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 338; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = __Pyx_PyInt_AsInt(__pyx_v_max_target_chunks); if (unlikely((__pyx_t_4 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 339; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_self->max_target_chunks = __pyx_t_4; } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":340 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":341 * self.max_target_chunks = max_target_chunks * * if max_target_length is None: # <<<<<<<<<<<<<< @@ -38515,7 +38510,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ __pyx_t_3 = (__pyx_v_max_target_length == Py_None); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":341 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":342 * * if max_target_length is None: * self.max_target_length = max_initial_size # <<<<<<<<<<<<<< @@ -38527,26 +38522,26 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":343 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":344 * self.max_target_length = max_initial_size * else: * self.max_target_length = max_target_length # <<<<<<<<<<<<<< * * # algorithmic parameters and settings */ - __pyx_t_4 = __Pyx_PyInt_AsInt(__pyx_v_max_target_length); if (unlikely((__pyx_t_4 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 343; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = __Pyx_PyInt_AsInt(__pyx_v_max_target_length); if (unlikely((__pyx_t_4 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 344; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_self->max_target_length = __pyx_t_4; } __pyx_L6:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":346 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":347 * * # algorithmic parameters and settings * self.precomputed_collocations = {} # <<<<<<<<<<<<<< * self.precomputed_index = {} * self.use_index = use_index */ - __pyx_t_2 = PyDict_New(); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 346; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyDict_New(); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 347; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_2)); __Pyx_GIVEREF(((PyObject *)__pyx_t_2)); __Pyx_GOTREF(__pyx_v_self->precomputed_collocations); @@ -38554,14 +38549,14 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ __pyx_v_self->precomputed_collocations = ((PyObject *)__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":347 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":348 * # algorithmic parameters and settings * self.precomputed_collocations = {} * self.precomputed_index = {} # <<<<<<<<<<<<<< * self.use_index = use_index * self.use_collocations = use_collocations */ - __pyx_t_2 = PyDict_New(); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 347; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyDict_New(); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 348; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_2)); __Pyx_GIVEREF(((PyObject *)__pyx_t_2)); __Pyx_GOTREF(__pyx_v_self->precomputed_index); @@ -38569,7 +38564,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ __pyx_v_self->precomputed_index = ((PyObject *)__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":348 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":349 * self.precomputed_collocations = {} * self.precomputed_index = {} * self.use_index = use_index # <<<<<<<<<<<<<< @@ -38578,7 +38573,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ __pyx_v_self->use_index = __pyx_v_use_index; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":349 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":350 * self.precomputed_index = {} * self.use_index = use_index * self.use_collocations = use_collocations # <<<<<<<<<<<<<< @@ -38587,14 +38582,14 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ __pyx_v_self->use_collocations = __pyx_v_use_collocations; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":350 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":351 * self.use_index = use_index * self.use_collocations = use_collocations * self.max_rank = {} # <<<<<<<<<<<<<< * self.precompute_file = precompute_file * self.precompute_rank = precompute_rank */ - __pyx_t_2 = PyDict_New(); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 350; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyDict_New(); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 351; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_2)); __Pyx_GIVEREF(((PyObject *)__pyx_t_2)); __Pyx_GOTREF(__pyx_v_self->max_rank); @@ -38602,7 +38597,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ __pyx_v_self->max_rank = ((PyObject *)__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":351 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":352 * self.use_collocations = use_collocations * self.max_rank = {} * self.precompute_file = precompute_file # <<<<<<<<<<<<<< @@ -38615,7 +38610,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ __Pyx_DECREF(__pyx_v_self->precompute_file); __pyx_v_self->precompute_file = __pyx_v_precompute_file; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":352 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":353 * self.max_rank = {} * self.precompute_file = precompute_file * self.precompute_rank = precompute_rank # <<<<<<<<<<<<<< @@ -38624,7 +38619,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ __pyx_v_self->precompute_rank = __pyx_v_precompute_rank; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":353 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":354 * self.precompute_file = precompute_file * self.precompute_rank = precompute_rank * self.precompute_secondary_rank = precompute_secondary_rank # <<<<<<<<<<<<<< @@ -38633,7 +38628,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ __pyx_v_self->precompute_secondary_rank = __pyx_v_precompute_secondary_rank; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":354 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":355 * self.precompute_rank = precompute_rank * self.precompute_secondary_rank = precompute_secondary_rank * self.use_baeza_yates = use_baeza_yates # <<<<<<<<<<<<<< @@ -38642,7 +38637,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ __pyx_v_self->use_baeza_yates = __pyx_v_use_baeza_yates; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":355 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":356 * self.precompute_secondary_rank = precompute_secondary_rank * self.use_baeza_yates = use_baeza_yates * self.by_slack_factor = by_slack_factor # <<<<<<<<<<<<<< @@ -38651,7 +38646,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ __pyx_v_self->by_slack_factor = __pyx_v_by_slack_factor; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":356 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":357 * self.use_baeza_yates = use_baeza_yates * self.by_slack_factor = by_slack_factor * if tight_phrases: # <<<<<<<<<<<<<< @@ -38660,7 +38655,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ if (__pyx_v_tight_phrases) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":357 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":358 * self.by_slack_factor = by_slack_factor * if tight_phrases: * self.tight_phrases = 1 # <<<<<<<<<<<<<< @@ -38672,7 +38667,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":359 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":360 * self.tight_phrases = 1 * else: * self.tight_phrases = 0 # <<<<<<<<<<<<<< @@ -38683,7 +38678,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ } __pyx_L7:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":361 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":362 * self.tight_phrases = 0 * * if require_aligned_chunks: # <<<<<<<<<<<<<< @@ -38692,7 +38687,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ if (__pyx_v_require_aligned_chunks) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":363 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":364 * if require_aligned_chunks: * # one condition is a stronger version of the other. * self.require_aligned_chunks = 1 # <<<<<<<<<<<<<< @@ -38701,7 +38696,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ __pyx_v_self->require_aligned_chunks = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":364 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":365 * # one condition is a stronger version of the other. * self.require_aligned_chunks = 1 * self.require_aligned_terminal = 1 # <<<<<<<<<<<<<< @@ -38712,7 +38707,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ goto __pyx_L8; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":365 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":366 * self.require_aligned_chunks = 1 * self.require_aligned_terminal = 1 * elif require_aligned_terminal: # <<<<<<<<<<<<<< @@ -38721,7 +38716,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ if (__pyx_v_require_aligned_terminal) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":366 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":367 * self.require_aligned_terminal = 1 * elif require_aligned_terminal: * self.require_aligned_chunks = 0 # <<<<<<<<<<<<<< @@ -38730,7 +38725,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ __pyx_v_self->require_aligned_chunks = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":367 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":368 * elif require_aligned_terminal: * self.require_aligned_chunks = 0 * self.require_aligned_terminal = 1 # <<<<<<<<<<<<<< @@ -38742,7 +38737,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":369 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":370 * self.require_aligned_terminal = 1 * else: * self.require_aligned_chunks = 0 # <<<<<<<<<<<<<< @@ -38751,7 +38746,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ */ __pyx_v_self->require_aligned_chunks = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":370 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":371 * else: * self.require_aligned_chunks = 0 * self.require_aligned_terminal = 0 # <<<<<<<<<<<<<< @@ -38762,7 +38757,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ } __pyx_L8:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":374 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":375 * * # diagnostics * self.prev_norm_prefix = () # <<<<<<<<<<<<<< @@ -38775,17 +38770,17 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ __Pyx_DECREF(__pyx_v_self->prev_norm_prefix); __pyx_v_self->prev_norm_prefix = ((PyObject *)__pyx_empty_tuple); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":376 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":377 * self.prev_norm_prefix = () * * self.findexes = IntList(initial_len=10) # <<<<<<<<<<<<<< * self.findexes1 = IntList(initial_len=10) * */ - __pyx_t_2 = PyDict_New(); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 376; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyDict_New(); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 377; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_2)); - if (PyDict_SetItem(__pyx_t_2, ((PyObject *)__pyx_n_s__initial_len), __pyx_int_10) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 376; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_1 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_IntList)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_2)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 376; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_2, ((PyObject *)__pyx_n_s__initial_len), __pyx_int_10) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 377; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_IntList)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_2)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 377; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; __Pyx_GIVEREF(__pyx_t_1); @@ -38794,17 +38789,17 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ __pyx_v_self->findexes = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":377 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":378 * * self.findexes = IntList(initial_len=10) * self.findexes1 = IntList(initial_len=10) # <<<<<<<<<<<<<< * * def configure(self, SuffixArray fsarray, DataArray edarray, */ - __pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 377; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 378; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_1)); - if (PyDict_SetItem(__pyx_t_1, ((PyObject *)__pyx_n_s__initial_len), __pyx_int_10) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 377; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_2 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_IntList)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_1)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 377; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_1, ((PyObject *)__pyx_n_s__initial_len), __pyx_int_10) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 378; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_IntList)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_1)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 378; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; __Pyx_GIVEREF(__pyx_t_2); @@ -38858,21 +38853,21 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_3configure(PyObject *__ case 1: if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__edarray)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("configure", 1, 4, 4, 1); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 379; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("configure", 1, 4, 4, 1); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 380; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 2: if (likely((values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__sampler)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("configure", 1, 4, 4, 2); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 379; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("configure", 1, 4, 4, 2); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 380; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 3: if (likely((values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__scorer)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("configure", 1, 4, 4, 3); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 379; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("configure", 1, 4, 4, 3); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 380; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "configure") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 379; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "configure") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 380; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } else if (PyTuple_GET_SIZE(__pyx_args) != 4) { goto __pyx_L5_argtuple_error; @@ -38889,16 +38884,16 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_3configure(PyObject *__ } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("configure", 1, 4, 4, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 379; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("configure", 1, 4, 4, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 380; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_L3_error:; __Pyx_AddTraceback("_sa.HieroCachingRuleFactory.configure", __pyx_clineno, __pyx_lineno, __pyx_filename); __Pyx_RefNannyFinishContext(); return NULL; __pyx_L4_argument_unpacking_done:; - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_fsarray), __pyx_ptype_3_sa_SuffixArray, 1, "fsarray", 0))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 379; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_edarray), __pyx_ptype_3_sa_DataArray, 1, "edarray", 0))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 379; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_sampler), __pyx_ptype_3_sa_Sampler, 1, "sampler", 0))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 380; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_scorer), __pyx_ptype_3_sa_Scorer, 1, "scorer", 0))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 380; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_fsarray), __pyx_ptype_3_sa_SuffixArray, 1, "fsarray", 0))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 380; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_edarray), __pyx_ptype_3_sa_DataArray, 1, "edarray", 0))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 380; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_sampler), __pyx_ptype_3_sa_Sampler, 1, "sampler", 0))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 381; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_scorer), __pyx_ptype_3_sa_Scorer, 1, "scorer", 0))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 381; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_r = __pyx_pf_3_sa_23HieroCachingRuleFactory_2configure(((struct __pyx_obj_3_sa_HieroCachingRuleFactory *)__pyx_v_self), __pyx_v_fsarray, __pyx_v_edarray, __pyx_v_sampler, __pyx_v_scorer); goto __pyx_L0; __pyx_L1_error:; @@ -38908,7 +38903,7 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_3configure(PyObject *__ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":379 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":380 * self.findexes1 = IntList(initial_len=10) * * def configure(self, SuffixArray fsarray, DataArray edarray, # <<<<<<<<<<<<<< @@ -38926,7 +38921,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_2configure(struct __pyx int __pyx_clineno = 0; __Pyx_RefNannySetupContext("configure", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":384 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":385 * Here we also use it to precompute the most expensive intersections * in the corpus quickly.''' * self.fsa = fsarray # <<<<<<<<<<<<<< @@ -38939,7 +38934,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_2configure(struct __pyx __Pyx_DECREF(((PyObject *)__pyx_v_self->fsa)); __pyx_v_self->fsa = __pyx_v_fsarray; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":385 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":386 * in the corpus quickly.''' * self.fsa = fsarray * self.fda = fsarray.darray # <<<<<<<<<<<<<< @@ -38952,7 +38947,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_2configure(struct __pyx __Pyx_DECREF(((PyObject *)__pyx_v_self->fda)); __pyx_v_self->fda = __pyx_v_fsarray->darray; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":386 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":387 * self.fsa = fsarray * self.fda = fsarray.darray * self.eda = edarray # <<<<<<<<<<<<<< @@ -38965,7 +38960,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_2configure(struct __pyx __Pyx_DECREF(((PyObject *)__pyx_v_self->eda)); __pyx_v_self->eda = __pyx_v_edarray; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":387 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":388 * self.fda = fsarray.darray * self.eda = edarray * self.fid2symid = self.set_idmap(self.fda) # <<<<<<<<<<<<<< @@ -38974,17 +38969,17 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_2configure(struct __pyx */ __pyx_t_1 = ((PyObject *)__pyx_v_self->fda); __Pyx_INCREF(__pyx_t_1); - __pyx_t_2 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->set_idmap(__pyx_v_self, ((struct __pyx_obj_3_sa_DataArray *)__pyx_t_1)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 387; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->set_idmap(__pyx_v_self, ((struct __pyx_obj_3_sa_DataArray *)__pyx_t_1)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 388; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - if (!(likely(((__pyx_t_2) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_2, __pyx_ptype_3_sa_IntList))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 387; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_2) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_2, __pyx_ptype_3_sa_IntList))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 388; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GIVEREF(__pyx_t_2); __Pyx_GOTREF(__pyx_v_self->fid2symid); __Pyx_DECREF(((PyObject *)__pyx_v_self->fid2symid)); __pyx_v_self->fid2symid = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":388 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":389 * self.eda = edarray * self.fid2symid = self.set_idmap(self.fda) * self.eid2symid = self.set_idmap(self.eda) # <<<<<<<<<<<<<< @@ -38993,31 +38988,31 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_2configure(struct __pyx */ __pyx_t_2 = ((PyObject *)__pyx_v_self->eda); __Pyx_INCREF(__pyx_t_2); - __pyx_t_1 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->set_idmap(__pyx_v_self, ((struct __pyx_obj_3_sa_DataArray *)__pyx_t_2)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 388; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->set_idmap(__pyx_v_self, ((struct __pyx_obj_3_sa_DataArray *)__pyx_t_2)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 389; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_3_sa_IntList))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 388; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_3_sa_IntList))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 389; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GIVEREF(__pyx_t_1); __Pyx_GOTREF(__pyx_v_self->eid2symid); __Pyx_DECREF(((PyObject *)__pyx_v_self->eid2symid)); __pyx_v_self->eid2symid = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":389 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":390 * self.fid2symid = self.set_idmap(self.fda) * self.eid2symid = self.set_idmap(self.eda) * self.precompute() # <<<<<<<<<<<<<< * self.sampler = sampler * self.scorer = scorer */ - __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s__precompute); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 389; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s__precompute); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 390; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_2 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 389; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 390; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":390 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":391 * self.eid2symid = self.set_idmap(self.eda) * self.precompute() * self.sampler = sampler # <<<<<<<<<<<<<< @@ -39030,7 +39025,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_2configure(struct __pyx __Pyx_DECREF(((PyObject *)__pyx_v_self->sampler)); __pyx_v_self->sampler = __pyx_v_sampler; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":391 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":392 * self.precompute() * self.sampler = sampler * self.scorer = scorer # <<<<<<<<<<<<<< @@ -39056,7 +39051,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_2configure(struct __pyx return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":393 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":394 * self.scorer = scorer * * cdef set_idmap(self, DataArray darray): # <<<<<<<<<<<<<< @@ -39081,7 +39076,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_set_idmap(CYTHON_UNUSED int __pyx_clineno = 0; __Pyx_RefNannySetupContext("set_idmap", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":397 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":398 * cdef IntList idmap * * N = len(darray.id2word) # <<<<<<<<<<<<<< @@ -39090,30 +39085,30 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_set_idmap(CYTHON_UNUSED */ __pyx_t_1 = __pyx_v_darray->id2word; __Pyx_INCREF(__pyx_t_1); - __pyx_t_2 = PyObject_Length(__pyx_t_1); if (unlikely(__pyx_t_2 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 397; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Length(__pyx_t_1); if (unlikely(__pyx_t_2 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 398; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_v_N = __pyx_t_2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":398 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":399 * * N = len(darray.id2word) * idmap = IntList(initial_len=N) # <<<<<<<<<<<<<< * for word_id from 0 <= word_id < N: * new_word_id = sym_fromstring(darray.id2word[word_id], True) */ - __pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 398; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 399; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_1)); - __pyx_t_3 = PyInt_FromLong(__pyx_v_N); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 398; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyInt_FromLong(__pyx_v_N); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 399; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - if (PyDict_SetItem(__pyx_t_1, ((PyObject *)__pyx_n_s__initial_len), __pyx_t_3) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 398; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_1, ((PyObject *)__pyx_n_s__initial_len), __pyx_t_3) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 399; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - __pyx_t_3 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_IntList)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_1)); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 398; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_IntList)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_1)); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 399; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; __pyx_v_idmap = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":399 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":400 * N = len(darray.id2word) * idmap = IntList(initial_len=N) * for word_id from 0 <= word_id < N: # <<<<<<<<<<<<<< @@ -39123,20 +39118,20 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_set_idmap(CYTHON_UNUSED __pyx_t_4 = __pyx_v_N; for (__pyx_v_word_id = 0; __pyx_v_word_id < __pyx_t_4; __pyx_v_word_id++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":400 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":401 * idmap = IntList(initial_len=N) * for word_id from 0 <= word_id < N: * new_word_id = sym_fromstring(darray.id2word[word_id], True) # <<<<<<<<<<<<<< * idmap.arr[word_id] = new_word_id * return idmap */ - __pyx_t_3 = __Pyx_GetItemInt(__pyx_v_darray->id2word, __pyx_v_word_id, sizeof(int), PyInt_FromLong); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 400; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __Pyx_GetItemInt(__pyx_v_darray->id2word, __pyx_v_word_id, sizeof(int), PyInt_FromLong); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 401; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __pyx_t_5 = PyBytes_AsString(__pyx_t_3); if (unlikely((!__pyx_t_5) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 400; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyBytes_AsString(__pyx_t_3); if (unlikely((!__pyx_t_5) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 401; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; __pyx_v_new_word_id = __pyx_f_3_sa_sym_fromstring(__pyx_t_5, 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":401 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":402 * for word_id from 0 <= word_id < N: * new_word_id = sym_fromstring(darray.id2word[word_id], True) * idmap.arr[word_id] = new_word_id # <<<<<<<<<<<<<< @@ -39146,7 +39141,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_set_idmap(CYTHON_UNUSED (__pyx_v_idmap->arr[__pyx_v_word_id]) = __pyx_v_new_word_id; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":402 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":403 * new_word_id = sym_fromstring(darray.id2word[word_id], True) * idmap.arr[word_id] = new_word_id * return idmap # <<<<<<<<<<<<<< @@ -39183,7 +39178,7 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_5pattern2phrase(PyObjec return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":405 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":406 * * * def pattern2phrase(self, pattern): # <<<<<<<<<<<<<< @@ -39211,7 +39206,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_4pattern2phrase(struct int __pyx_clineno = 0; __Pyx_RefNannySetupContext("pattern2phrase", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":407 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":408 * def pattern2phrase(self, pattern): * # pattern is a tuple, which we must convert to a hiero Phrase * result = () # <<<<<<<<<<<<<< @@ -39221,7 +39216,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_4pattern2phrase(struct __Pyx_INCREF(((PyObject *)__pyx_empty_tuple)); __pyx_v_result = __pyx_empty_tuple; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":408 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":409 * # pattern is a tuple, which we must convert to a hiero Phrase * result = () * arity = 0 # <<<<<<<<<<<<<< @@ -39231,7 +39226,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_4pattern2phrase(struct __Pyx_INCREF(__pyx_int_0); __pyx_v_arity = __pyx_int_0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":409 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":410 * result = () * arity = 0 * for word_id in pattern: # <<<<<<<<<<<<<< @@ -39242,7 +39237,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_4pattern2phrase(struct __pyx_t_1 = __pyx_v_pattern; __Pyx_INCREF(__pyx_t_1); __pyx_t_2 = 0; __pyx_t_3 = NULL; } else { - __pyx_t_2 = -1; __pyx_t_1 = PyObject_GetIter(__pyx_v_pattern); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 409; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = -1; __pyx_t_1 = PyObject_GetIter(__pyx_v_pattern); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 410; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_t_3 = Py_TYPE(__pyx_t_1)->tp_iternext; } @@ -39250,23 +39245,23 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_4pattern2phrase(struct if (!__pyx_t_3 && PyList_CheckExact(__pyx_t_1)) { if (__pyx_t_2 >= PyList_GET_SIZE(__pyx_t_1)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_4 = PyList_GET_ITEM(__pyx_t_1, __pyx_t_2); __Pyx_INCREF(__pyx_t_4); __pyx_t_2++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 409; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyList_GET_ITEM(__pyx_t_1, __pyx_t_2); __Pyx_INCREF(__pyx_t_4); __pyx_t_2++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 410; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_4 = PySequence_ITEM(__pyx_t_1, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 409; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PySequence_ITEM(__pyx_t_1, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 410; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else if (!__pyx_t_3 && PyTuple_CheckExact(__pyx_t_1)) { if (__pyx_t_2 >= PyTuple_GET_SIZE(__pyx_t_1)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_4 = PyTuple_GET_ITEM(__pyx_t_1, __pyx_t_2); __Pyx_INCREF(__pyx_t_4); __pyx_t_2++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 409; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_GET_ITEM(__pyx_t_1, __pyx_t_2); __Pyx_INCREF(__pyx_t_4); __pyx_t_2++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 410; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_4 = PySequence_ITEM(__pyx_t_1, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 409; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PySequence_ITEM(__pyx_t_1, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 410; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else { __pyx_t_4 = __pyx_t_3(__pyx_t_1); if (unlikely(!__pyx_t_4)) { if (PyErr_Occurred()) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 409; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 410; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } break; } @@ -39276,74 +39271,74 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_4pattern2phrase(struct __pyx_v_word_id = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":410 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":411 * arity = 0 * for word_id in pattern: * if word_id == -1: # <<<<<<<<<<<<<< * arity = arity + 1 * new_id = sym_setindex(self.category, arity) */ - __pyx_t_4 = PyObject_RichCompare(__pyx_v_word_id, __pyx_int_neg_1, Py_EQ); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 410; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_5 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 410; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_RichCompare(__pyx_v_word_id, __pyx_int_neg_1, Py_EQ); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 411; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 411; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":411 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":412 * for word_id in pattern: * if word_id == -1: * arity = arity + 1 # <<<<<<<<<<<<<< * new_id = sym_setindex(self.category, arity) * else: */ - __pyx_t_4 = PyNumber_Add(__pyx_v_arity, __pyx_int_1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 411; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyNumber_Add(__pyx_v_arity, __pyx_int_1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 412; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_v_arity); __pyx_v_arity = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":412 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":413 * if word_id == -1: * arity = arity + 1 * new_id = sym_setindex(self.category, arity) # <<<<<<<<<<<<<< * else: * new_id = sym_fromstring(self.fda.id2word[word_id], True) */ - __pyx_t_6 = __Pyx_PyInt_AsInt(__pyx_v_arity); if (unlikely((__pyx_t_6 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 412; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = __Pyx_PyInt_AsInt(__pyx_v_arity); if (unlikely((__pyx_t_6 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 413; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_new_id = __pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_t_6); goto __pyx_L5; } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":414 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":415 * new_id = sym_setindex(self.category, arity) * else: * new_id = sym_fromstring(self.fda.id2word[word_id], True) # <<<<<<<<<<<<<< * result = result + (new_id,) * return Phrase(result) */ - __pyx_t_4 = PyObject_GetItem(__pyx_v_self->fda->id2word, __pyx_v_word_id); if (!__pyx_t_4) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 414; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_GetItem(__pyx_v_self->fda->id2word, __pyx_v_word_id); if (!__pyx_t_4) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 415; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_7 = PyBytes_AsString(__pyx_t_4); if (unlikely((!__pyx_t_7) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 414; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyBytes_AsString(__pyx_t_4); if (unlikely((!__pyx_t_7) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 415; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __pyx_v_new_id = __pyx_f_3_sa_sym_fromstring(__pyx_t_7, 1); } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":415 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":416 * else: * new_id = sym_fromstring(self.fda.id2word[word_id], True) * result = result + (new_id,) # <<<<<<<<<<<<<< * return Phrase(result) * */ - __pyx_t_4 = PyInt_FromLong(__pyx_v_new_id); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 415; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyInt_FromLong(__pyx_v_new_id); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 416; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_8 = PyTuple_New(1); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 415; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_8 = PyTuple_New(1); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 416; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_8); PyTuple_SET_ITEM(__pyx_t_8, 0, __pyx_t_4); __Pyx_GIVEREF(__pyx_t_4); __pyx_t_4 = 0; - __pyx_t_4 = PyNumber_Add(((PyObject *)__pyx_v_result), ((PyObject *)__pyx_t_8)); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 415; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyNumber_Add(((PyObject *)__pyx_v_result), ((PyObject *)__pyx_t_8)); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 416; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_4)); __Pyx_DECREF(((PyObject *)__pyx_t_8)); __pyx_t_8 = 0; __Pyx_DECREF(((PyObject *)__pyx_v_result)); @@ -39352,7 +39347,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_4pattern2phrase(struct } __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":416 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":417 * new_id = sym_fromstring(self.fda.id2word[word_id], True) * result = result + (new_id,) * return Phrase(result) # <<<<<<<<<<<<<< @@ -39360,12 +39355,12 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_4pattern2phrase(struct * def pattern2phrase_plus(self, pattern): */ __Pyx_XDECREF(__pyx_r); - __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 416; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 417; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_INCREF(((PyObject *)__pyx_v_result)); PyTuple_SET_ITEM(__pyx_t_1, 0, ((PyObject *)__pyx_v_result)); __Pyx_GIVEREF(((PyObject *)__pyx_v_result)); - __pyx_t_4 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_Phrase)), ((PyObject *)__pyx_t_1), NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 416; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_Phrase)), ((PyObject *)__pyx_t_1), NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 417; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; __pyx_r = __pyx_t_4; @@ -39400,7 +39395,7 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_7pattern2phrase_plus(Py return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":418 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":419 * return Phrase(result) * * def pattern2phrase_plus(self, pattern): # <<<<<<<<<<<<<< @@ -39430,19 +39425,19 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_6pattern2phrase_plus(st int __pyx_clineno = 0; __Pyx_RefNannySetupContext("pattern2phrase_plus", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":421 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":422 * # returns a list containing both the pattern, and pattern * # suffixed/prefixed with the NT category. * patterns = [] # <<<<<<<<<<<<<< * result = () * arity = 0 */ - __pyx_t_1 = PyList_New(0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 421; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyList_New(0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 422; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_v_patterns = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":422 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":423 * # suffixed/prefixed with the NT category. * patterns = [] * result = () # <<<<<<<<<<<<<< @@ -39452,7 +39447,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_6pattern2phrase_plus(st __Pyx_INCREF(((PyObject *)__pyx_empty_tuple)); __pyx_v_result = __pyx_empty_tuple; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":423 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":424 * patterns = [] * result = () * arity = 0 # <<<<<<<<<<<<<< @@ -39462,7 +39457,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_6pattern2phrase_plus(st __Pyx_INCREF(__pyx_int_0); __pyx_v_arity = __pyx_int_0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":424 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":425 * result = () * arity = 0 * for word_id in pattern: # <<<<<<<<<<<<<< @@ -39473,7 +39468,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_6pattern2phrase_plus(st __pyx_t_1 = __pyx_v_pattern; __Pyx_INCREF(__pyx_t_1); __pyx_t_2 = 0; __pyx_t_3 = NULL; } else { - __pyx_t_2 = -1; __pyx_t_1 = PyObject_GetIter(__pyx_v_pattern); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 424; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = -1; __pyx_t_1 = PyObject_GetIter(__pyx_v_pattern); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 425; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_t_3 = Py_TYPE(__pyx_t_1)->tp_iternext; } @@ -39481,23 +39476,23 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_6pattern2phrase_plus(st if (!__pyx_t_3 && PyList_CheckExact(__pyx_t_1)) { if (__pyx_t_2 >= PyList_GET_SIZE(__pyx_t_1)) break; 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__Pyx_INCREF(__pyx_t_4); __pyx_t_2++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 424; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_GET_ITEM(__pyx_t_1, __pyx_t_2); __Pyx_INCREF(__pyx_t_4); __pyx_t_2++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 425; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_4 = PySequence_ITEM(__pyx_t_1, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 424; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PySequence_ITEM(__pyx_t_1, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 425; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else { __pyx_t_4 = __pyx_t_3(__pyx_t_1); if (unlikely(!__pyx_t_4)) { if (PyErr_Occurred()) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 424; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 425; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } break; } @@ -39507,74 +39502,74 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_6pattern2phrase_plus(st __pyx_v_word_id = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":425 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":426 * arity = 0 * for word_id in pattern: * if word_id == -1: # <<<<<<<<<<<<<< * arity = arity + 1 * new_id = sym_setindex(self.category, arity) */ - __pyx_t_4 = PyObject_RichCompare(__pyx_v_word_id, __pyx_int_neg_1, Py_EQ); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 425; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_5 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 425; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_RichCompare(__pyx_v_word_id, __pyx_int_neg_1, Py_EQ); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 426; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 426; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":426 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":427 * for word_id in pattern: * if word_id == -1: * arity = arity + 1 # <<<<<<<<<<<<<< * new_id = sym_setindex(self.category, arity) * else: */ - __pyx_t_4 = PyNumber_Add(__pyx_v_arity, __pyx_int_1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 426; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyNumber_Add(__pyx_v_arity, __pyx_int_1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 427; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_v_arity); __pyx_v_arity = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":427 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":428 * if word_id == -1: * arity = arity + 1 * new_id = sym_setindex(self.category, arity) # <<<<<<<<<<<<<< * else: * new_id = sym_fromstring(self.fda.id2word[word_id], True) */ - __pyx_t_6 = __Pyx_PyInt_AsInt(__pyx_v_arity); if (unlikely((__pyx_t_6 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 427; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = __Pyx_PyInt_AsInt(__pyx_v_arity); if (unlikely((__pyx_t_6 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 428; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_new_id = __pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_t_6); goto __pyx_L5; } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":429 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":430 * new_id = sym_setindex(self.category, arity) * else: * new_id = sym_fromstring(self.fda.id2word[word_id], True) # <<<<<<<<<<<<<< * result = result + (new_id,) * patterns.append(Phrase(result)) */ - __pyx_t_4 = PyObject_GetItem(__pyx_v_self->fda->id2word, __pyx_v_word_id); if (!__pyx_t_4) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 429; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_GetItem(__pyx_v_self->fda->id2word, __pyx_v_word_id); if (!__pyx_t_4) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_7 = PyBytes_AsString(__pyx_t_4); if (unlikely((!__pyx_t_7) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 429; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyBytes_AsString(__pyx_t_4); if (unlikely((!__pyx_t_7) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __pyx_v_new_id = __pyx_f_3_sa_sym_fromstring(__pyx_t_7, 1); } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":430 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":431 * else: * new_id = sym_fromstring(self.fda.id2word[word_id], True) * result = result + (new_id,) # <<<<<<<<<<<<<< * patterns.append(Phrase(result)) * patterns.append(Phrase(result + (sym_setindex(self.category, 1),))) */ - __pyx_t_4 = PyInt_FromLong(__pyx_v_new_id); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyInt_FromLong(__pyx_v_new_id); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 431; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_8 = PyTuple_New(1); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_8 = PyTuple_New(1); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 431; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_8); PyTuple_SET_ITEM(__pyx_t_8, 0, __pyx_t_4); __Pyx_GIVEREF(__pyx_t_4); __pyx_t_4 = 0; - __pyx_t_4 = PyNumber_Add(((PyObject *)__pyx_v_result), ((PyObject *)__pyx_t_8)); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyNumber_Add(((PyObject *)__pyx_v_result), ((PyObject *)__pyx_t_8)); 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__pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_4, ((PyObject *)__pyx_n_s__from_binary), __pyx_v_self->precompute_file) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 443; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_Precomputation)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_4)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 443; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0; __pyx_v_pre = ((struct __pyx_obj_3_sa_Precomputation *)__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":444 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":445 * pre = Precomputation(from_binary=self.precompute_file) * # check parameters of precomputation -- some are critical and some are not * if pre.max_nonterminals != self.max_nonterminals: # <<<<<<<<<<<<<< @@ -39806,23 +39801,23 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __pyx_t_1 = (__pyx_v_pre->max_nonterminals != __pyx_v_self->max_nonterminals); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":445 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":446 * # check parameters of precomputation -- some are critical and some are not * if pre.max_nonterminals != self.max_nonterminals: * logger.warn("Precomputation done with max nonterminals %d, decoder uses %d", pre.max_nonterminals, self.max_nonterminals) # <<<<<<<<<<<<<< * if pre.max_length != self.max_length: * logger.warn("Precomputation done with max terminals %d, decoder uses %d", pre.max_length, self.max_length) */ - __pyx_t_2 = __Pyx_GetName(__pyx_m, __pyx_n_s__logger); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 445; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = __Pyx_GetName(__pyx_m, __pyx_n_s__logger); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 446; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_4 = PyObject_GetAttr(__pyx_t_2, __pyx_n_s__warn); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 445; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_GetAttr(__pyx_t_2, __pyx_n_s__warn); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 446; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - __pyx_t_2 = PyInt_FromLong(__pyx_v_pre->max_nonterminals); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 445; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyInt_FromLong(__pyx_v_pre->max_nonterminals); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 446; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_3 = PyInt_FromLong(__pyx_v_self->max_nonterminals); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 445; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyInt_FromLong(__pyx_v_self->max_nonterminals); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 446; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __pyx_t_5 = PyTuple_New(3); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 445; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyTuple_New(3); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 446; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_INCREF(((PyObject *)__pyx_kp_s_109)); PyTuple_SET_ITEM(__pyx_t_5, 0, ((PyObject *)__pyx_kp_s_109)); @@ -39833,7 +39828,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __Pyx_GIVEREF(__pyx_t_3); __pyx_t_2 = 0; __pyx_t_3 = 0; - __pyx_t_3 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_t_5), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 445; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_t_5), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 446; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_5)); __pyx_t_5 = 0; @@ -39842,7 +39837,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":446 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":447 * if pre.max_nonterminals != self.max_nonterminals: * logger.warn("Precomputation done with max nonterminals %d, decoder uses %d", pre.max_nonterminals, self.max_nonterminals) * if pre.max_length != self.max_length: # <<<<<<<<<<<<<< @@ -39852,23 +39847,23 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __pyx_t_1 = (__pyx_v_pre->max_length != __pyx_v_self->max_length); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":447 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":448 * logger.warn("Precomputation done with max nonterminals %d, decoder uses %d", pre.max_nonterminals, self.max_nonterminals) * if pre.max_length != self.max_length: * logger.warn("Precomputation done with max terminals %d, decoder uses %d", pre.max_length, self.max_length) # <<<<<<<<<<<<<< * if pre.train_max_initial_size != self.train_max_initial_size: * raise Exception("Precomputation done with max initial size %d, decoder uses %d" % (pre.train_max_initial_size, self.train_max_initial_size)) */ - __pyx_t_3 = __Pyx_GetName(__pyx_m, __pyx_n_s__logger); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 447; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __Pyx_GetName(__pyx_m, __pyx_n_s__logger); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 448; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __pyx_t_5 = PyObject_GetAttr(__pyx_t_3, __pyx_n_s__warn); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 447; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_GetAttr(__pyx_t_3, __pyx_n_s__warn); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 448; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - __pyx_t_3 = PyInt_FromLong(__pyx_v_pre->max_length); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 447; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyInt_FromLong(__pyx_v_pre->max_length); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 448; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __pyx_t_4 = PyInt_FromLong(__pyx_v_self->max_length); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 447; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyInt_FromLong(__pyx_v_self->max_length); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 448; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_2 = PyTuple_New(3); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 447; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyTuple_New(3); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 448; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_INCREF(((PyObject *)__pyx_kp_s_110)); PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_kp_s_110)); @@ -39879,7 +39874,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __Pyx_GIVEREF(__pyx_t_4); __pyx_t_3 = 0; __pyx_t_4 = 0; - __pyx_t_4 = PyObject_Call(__pyx_t_5, ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 447; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_Call(__pyx_t_5, ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 448; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; @@ -39888,7 +39883,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":448 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":449 * if pre.max_length != self.max_length: * logger.warn("Precomputation done with max terminals %d, decoder uses %d", pre.max_length, self.max_length) * if pre.train_max_initial_size != self.train_max_initial_size: # <<<<<<<<<<<<<< @@ -39898,18 +39893,18 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __pyx_t_1 = (__pyx_v_pre->train_max_initial_size != __pyx_v_self->train_max_initial_size); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":449 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":450 * logger.warn("Precomputation done with max terminals %d, decoder uses %d", pre.max_length, self.max_length) * if pre.train_max_initial_size != self.train_max_initial_size: * raise Exception("Precomputation done with max initial size %d, decoder uses %d" % (pre.train_max_initial_size, self.train_max_initial_size)) # <<<<<<<<<<<<<< * if pre.train_min_gap_size != self.train_min_gap_size: * raise Exception("Precomputation done with min gap size %d, decoder uses %d" % (pre.train_min_gap_size, self.train_min_gap_size)) */ - __pyx_t_4 = PyInt_FromLong(__pyx_v_pre->train_max_initial_size); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 449; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyInt_FromLong(__pyx_v_pre->train_max_initial_size); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_2 = PyInt_FromLong(__pyx_v_self->train_max_initial_size); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 449; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyInt_FromLong(__pyx_v_self->train_max_initial_size); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_5 = PyTuple_New(2); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 449; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyTuple_New(2); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); PyTuple_SET_ITEM(__pyx_t_5, 0, __pyx_t_4); __Pyx_GIVEREF(__pyx_t_4); @@ -39917,25 +39912,25 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __Pyx_GIVEREF(__pyx_t_2); __pyx_t_4 = 0; __pyx_t_2 = 0; - __pyx_t_2 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_111), ((PyObject *)__pyx_t_5)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 449; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_111), ((PyObject *)__pyx_t_5)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_2)); __Pyx_DECREF(((PyObject *)__pyx_t_5)); __pyx_t_5 = 0; - __pyx_t_5 = PyTuple_New(1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 449; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyTuple_New(1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); PyTuple_SET_ITEM(__pyx_t_5, 0, ((PyObject *)__pyx_t_2)); __Pyx_GIVEREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; - __pyx_t_2 = PyObject_Call(__pyx_builtin_Exception, ((PyObject *)__pyx_t_5), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 449; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Call(__pyx_builtin_Exception, ((PyObject *)__pyx_t_5), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(((PyObject *)__pyx_t_5)); __pyx_t_5 = 0; __Pyx_Raise(__pyx_t_2, 0, 0, 0); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 449; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L1_error;} goto __pyx_L6; } __pyx_L6:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":450 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":451 * if pre.train_max_initial_size != self.train_max_initial_size: * raise Exception("Precomputation done with max initial size %d, decoder uses %d" % (pre.train_max_initial_size, self.train_max_initial_size)) * if pre.train_min_gap_size != self.train_min_gap_size: # <<<<<<<<<<<<<< @@ -39945,18 +39940,18 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __pyx_t_1 = (__pyx_v_pre->train_min_gap_size != __pyx_v_self->train_min_gap_size); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":451 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":452 * raise Exception("Precomputation done with max initial size %d, decoder uses %d" % (pre.train_max_initial_size, self.train_max_initial_size)) * if pre.train_min_gap_size != self.train_min_gap_size: * raise Exception("Precomputation done with min gap size %d, decoder uses %d" % (pre.train_min_gap_size, self.train_min_gap_size)) # <<<<<<<<<<<<<< * if self.use_index: * logger.info("Converting %d hash keys on precomputed inverted index... ", len(pre.precomputed_index)) */ - __pyx_t_2 = PyInt_FromLong(__pyx_v_pre->train_min_gap_size); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 451; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyInt_FromLong(__pyx_v_pre->train_min_gap_size); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 452; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_5 = PyInt_FromLong(__pyx_v_self->train_min_gap_size); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 451; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyInt_FromLong(__pyx_v_self->train_min_gap_size); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 452; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __pyx_t_4 = PyTuple_New(2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 451; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_New(2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 452; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_t_2); __Pyx_GIVEREF(__pyx_t_2); @@ -39964,25 +39959,25 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __Pyx_GIVEREF(__pyx_t_5); __pyx_t_2 = 0; __pyx_t_5 = 0; - __pyx_t_5 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_112), ((PyObject *)__pyx_t_4)); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 451; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_112), ((PyObject *)__pyx_t_4)); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 452; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_5)); __Pyx_DECREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0; - __pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 451; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 452; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); PyTuple_SET_ITEM(__pyx_t_4, 0, ((PyObject *)__pyx_t_5)); __Pyx_GIVEREF(((PyObject *)__pyx_t_5)); __pyx_t_5 = 0; - __pyx_t_5 = PyObject_Call(__pyx_builtin_Exception, ((PyObject *)__pyx_t_4), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 451; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_Call(__pyx_builtin_Exception, ((PyObject *)__pyx_t_4), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 452; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0; __Pyx_Raise(__pyx_t_5, 0, 0, 0); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 451; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 452; __pyx_clineno = __LINE__; goto __pyx_L1_error;} goto __pyx_L7; } __pyx_L7:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":452 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":453 * if pre.train_min_gap_size != self.train_min_gap_size: * raise Exception("Precomputation done with min gap size %d, decoder uses %d" % (pre.train_min_gap_size, self.train_min_gap_size)) * if self.use_index: # <<<<<<<<<<<<<< @@ -39991,25 +39986,25 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py */ if (__pyx_v_self->use_index) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":453 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":454 * raise Exception("Precomputation done with min gap size %d, decoder uses %d" % (pre.train_min_gap_size, self.train_min_gap_size)) * if self.use_index: * logger.info("Converting %d hash keys on precomputed inverted index... ", len(pre.precomputed_index)) # <<<<<<<<<<<<<< * for pattern, arr in pre.precomputed_index.iteritems(): * phrases = self.pattern2phrase_plus(pattern) */ - __pyx_t_5 = __Pyx_GetName(__pyx_m, __pyx_n_s__logger); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 453; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __Pyx_GetName(__pyx_m, __pyx_n_s__logger); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 454; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __pyx_t_4 = PyObject_GetAttr(__pyx_t_5, __pyx_n_s__info); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 453; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_GetAttr(__pyx_t_5, __pyx_n_s__info); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 454; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; __pyx_t_5 = __pyx_v_pre->precomputed_index; __Pyx_INCREF(__pyx_t_5); - __pyx_t_6 = PyObject_Length(__pyx_t_5); if (unlikely(__pyx_t_6 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 453; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyObject_Length(__pyx_t_5); if (unlikely(__pyx_t_6 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 454; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_5 = PyInt_FromSsize_t(__pyx_t_6); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 453; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyInt_FromSsize_t(__pyx_t_6); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 454; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __pyx_t_2 = PyTuple_New(2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 453; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyTuple_New(2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 454; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_INCREF(((PyObject *)__pyx_kp_s_113)); PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_kp_s_113)); @@ -40017,13 +40012,13 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py PyTuple_SET_ITEM(__pyx_t_2, 1, __pyx_t_5); __Pyx_GIVEREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_5 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 453; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 454; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":454 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":455 * if self.use_index: * logger.info("Converting %d hash keys on precomputed inverted index... ", len(pre.precomputed_index)) * for pattern, arr in pre.precomputed_index.iteritems(): # <<<<<<<<<<<<<< @@ -40033,9 +40028,9 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __pyx_t_6 = 0; if (unlikely(__pyx_v_pre->precomputed_index == Py_None)) { PyErr_Format(PyExc_AttributeError, "'NoneType' object has no attribute '%s'", "iteritems"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 454; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 455; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } - __pyx_t_2 = __Pyx_dict_iterator(__pyx_v_pre->precomputed_index, 0, ((PyObject *)__pyx_n_s__iteritems), (&__pyx_t_7), (&__pyx_t_8)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 454; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = __Pyx_dict_iterator(__pyx_v_pre->precomputed_index, 0, ((PyObject *)__pyx_n_s__iteritems), (&__pyx_t_7), (&__pyx_t_8)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 455; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_XDECREF(__pyx_t_5); __pyx_t_5 = __pyx_t_2; @@ -40043,7 +40038,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py while (1) { __pyx_t_9 = __Pyx_dict_iter_next(__pyx_t_5, __pyx_t_7, &__pyx_t_6, &__pyx_t_2, &__pyx_t_4, NULL, __pyx_t_8); if (unlikely(__pyx_t_9 == 0)) break; - if (unlikely(__pyx_t_9 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 454; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__pyx_t_9 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 455; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_GOTREF(__pyx_t_4); __Pyx_XDECREF(__pyx_v_pattern); @@ -40053,21 +40048,21 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __pyx_v_arr = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":455 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":456 * logger.info("Converting %d hash keys on precomputed inverted index... ", len(pre.precomputed_index)) * for pattern, arr in pre.precomputed_index.iteritems(): * phrases = self.pattern2phrase_plus(pattern) # <<<<<<<<<<<<<< * for phrase in phrases: * self.precomputed_index[phrase] = arr */ - __pyx_t_4 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s__pattern2phrase_plus); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 455; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s__pattern2phrase_plus); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 456; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_2 = PyTuple_New(1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 455; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyTuple_New(1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 456; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_INCREF(__pyx_v_pattern); PyTuple_SET_ITEM(__pyx_t_2, 0, __pyx_v_pattern); __Pyx_GIVEREF(__pyx_v_pattern); - __pyx_t_3 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 455; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 456; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; @@ -40075,7 +40070,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __pyx_v_phrases = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":456 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":457 * for pattern, arr in pre.precomputed_index.iteritems(): * phrases = self.pattern2phrase_plus(pattern) * for phrase in phrases: # <<<<<<<<<<<<<< @@ -40086,7 +40081,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __pyx_t_3 = __pyx_v_phrases; __Pyx_INCREF(__pyx_t_3); __pyx_t_10 = 0; __pyx_t_11 = NULL; } else { - __pyx_t_10 = -1; __pyx_t_3 = PyObject_GetIter(__pyx_v_phrases); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 456; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = -1; __pyx_t_3 = PyObject_GetIter(__pyx_v_phrases); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 457; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __pyx_t_11 = Py_TYPE(__pyx_t_3)->tp_iternext; } @@ -40094,23 +40089,23 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py if (!__pyx_t_11 && PyList_CheckExact(__pyx_t_3)) { if (__pyx_t_10 >= PyList_GET_SIZE(__pyx_t_3)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_2 = PyList_GET_ITEM(__pyx_t_3, __pyx_t_10); __Pyx_INCREF(__pyx_t_2); __pyx_t_10++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 456; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyList_GET_ITEM(__pyx_t_3, __pyx_t_10); __Pyx_INCREF(__pyx_t_2); __pyx_t_10++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 457; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_2 = PySequence_ITEM(__pyx_t_3, __pyx_t_10); __pyx_t_10++; if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 456; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PySequence_ITEM(__pyx_t_3, __pyx_t_10); __pyx_t_10++; if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 457; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else if (!__pyx_t_11 && PyTuple_CheckExact(__pyx_t_3)) { if (__pyx_t_10 >= PyTuple_GET_SIZE(__pyx_t_3)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_2 = PyTuple_GET_ITEM(__pyx_t_3, __pyx_t_10); __Pyx_INCREF(__pyx_t_2); __pyx_t_10++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 456; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyTuple_GET_ITEM(__pyx_t_3, __pyx_t_10); __Pyx_INCREF(__pyx_t_2); __pyx_t_10++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 457; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_2 = PySequence_ITEM(__pyx_t_3, __pyx_t_10); __pyx_t_10++; if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 456; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PySequence_ITEM(__pyx_t_3, __pyx_t_10); __pyx_t_10++; if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 457; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else { __pyx_t_2 = __pyx_t_11(__pyx_t_3); if (unlikely(!__pyx_t_2)) { if (PyErr_Occurred()) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 456; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 457; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } break; } @@ -40120,14 +40115,14 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __pyx_v_phrase = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":457 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":458 * phrases = self.pattern2phrase_plus(pattern) * for phrase in phrases: * self.precomputed_index[phrase] = arr # <<<<<<<<<<<<<< * if self.use_collocations: * logger.info("Converting %d hash keys on precomputed collocations... ", len(pre.precomputed_collocations)) */ - if (PyObject_SetItem(__pyx_v_self->precomputed_index, __pyx_v_phrase, __pyx_v_arr) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 457; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyObject_SetItem(__pyx_v_self->precomputed_index, __pyx_v_phrase, __pyx_v_arr) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 458; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; } @@ -40136,7 +40131,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py } __pyx_L8:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":458 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":459 * for phrase in phrases: * self.precomputed_index[phrase] = arr * if self.use_collocations: # <<<<<<<<<<<<<< @@ -40145,25 +40140,25 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py */ if (__pyx_v_self->use_collocations) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":459 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":460 * self.precomputed_index[phrase] = arr * if self.use_collocations: * logger.info("Converting %d hash keys on precomputed collocations... ", len(pre.precomputed_collocations)) # <<<<<<<<<<<<<< * for pattern, arr in pre.precomputed_collocations.iteritems(): * phrase = self.pattern2phrase(pattern) */ - __pyx_t_5 = __Pyx_GetName(__pyx_m, __pyx_n_s__logger); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 459; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __Pyx_GetName(__pyx_m, __pyx_n_s__logger); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 460; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __pyx_t_3 = PyObject_GetAttr(__pyx_t_5, __pyx_n_s__info); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 459; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_GetAttr(__pyx_t_5, __pyx_n_s__info); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 460; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; __pyx_t_5 = __pyx_v_pre->precomputed_collocations; __Pyx_INCREF(__pyx_t_5); - __pyx_t_7 = PyObject_Length(__pyx_t_5); if (unlikely(__pyx_t_7 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 459; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyObject_Length(__pyx_t_5); if (unlikely(__pyx_t_7 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 460; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_5 = PyInt_FromSsize_t(__pyx_t_7); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 459; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyInt_FromSsize_t(__pyx_t_7); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 460; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __pyx_t_2 = PyTuple_New(2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 459; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyTuple_New(2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 460; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_INCREF(((PyObject *)__pyx_kp_s_114)); PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_kp_s_114)); @@ -40171,13 +40166,13 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py PyTuple_SET_ITEM(__pyx_t_2, 1, __pyx_t_5); __Pyx_GIVEREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_5 = PyObject_Call(__pyx_t_3, ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 459; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_Call(__pyx_t_3, ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 460; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":460 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":461 * if self.use_collocations: * logger.info("Converting %d hash keys on precomputed collocations... ", len(pre.precomputed_collocations)) * for pattern, arr in pre.precomputed_collocations.iteritems(): # <<<<<<<<<<<<<< @@ -40187,9 +40182,9 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __pyx_t_7 = 0; if (unlikely(__pyx_v_pre->precomputed_collocations == Py_None)) { PyErr_Format(PyExc_AttributeError, "'NoneType' object has no attribute '%s'", "iteritems"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 460; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } - __pyx_t_2 = __Pyx_dict_iterator(__pyx_v_pre->precomputed_collocations, 0, ((PyObject *)__pyx_n_s__iteritems), (&__pyx_t_6), (&__pyx_t_8)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 460; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = __Pyx_dict_iterator(__pyx_v_pre->precomputed_collocations, 0, ((PyObject *)__pyx_n_s__iteritems), (&__pyx_t_6), (&__pyx_t_8)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_XDECREF(__pyx_t_5); __pyx_t_5 = __pyx_t_2; @@ -40197,7 +40192,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py while (1) { __pyx_t_9 = __Pyx_dict_iter_next(__pyx_t_5, __pyx_t_6, &__pyx_t_7, &__pyx_t_2, &__pyx_t_3, NULL, __pyx_t_8); if (unlikely(__pyx_t_9 == 0)) break; - if (unlikely(__pyx_t_9 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 460; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__pyx_t_9 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_GOTREF(__pyx_t_3); __Pyx_XDECREF(__pyx_v_pattern); @@ -40207,21 +40202,21 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __pyx_v_arr = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":461 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":462 * logger.info("Converting %d hash keys on precomputed collocations... ", len(pre.precomputed_collocations)) * for pattern, arr in pre.precomputed_collocations.iteritems(): * phrase = self.pattern2phrase(pattern) # <<<<<<<<<<<<<< * self.precomputed_collocations[phrase] = arr * stop_time = monitor_cpu() */ - __pyx_t_3 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s__pattern2phrase); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s__pattern2phrase); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 462; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __pyx_t_2 = PyTuple_New(1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyTuple_New(1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 462; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_INCREF(__pyx_v_pattern); PyTuple_SET_ITEM(__pyx_t_2, 0, __pyx_v_pattern); __Pyx_GIVEREF(__pyx_v_pattern); - __pyx_t_4 = PyObject_Call(__pyx_t_3, ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_Call(__pyx_t_3, ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 462; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; @@ -40229,47 +40224,47 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __pyx_v_phrase = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":462 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":463 * for pattern, arr in pre.precomputed_collocations.iteritems(): * phrase = self.pattern2phrase(pattern) * self.precomputed_collocations[phrase] = arr # <<<<<<<<<<<<<< * stop_time = monitor_cpu() * logger.info("Processing precomputations took %f seconds", stop_time - start_time) */ - if (PyObject_SetItem(__pyx_v_self->precomputed_collocations, __pyx_v_phrase, __pyx_v_arr) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 462; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyObject_SetItem(__pyx_v_self->precomputed_collocations, __pyx_v_phrase, __pyx_v_arr) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 463; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; goto __pyx_L13; } __pyx_L13:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":463 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":464 * phrase = self.pattern2phrase(pattern) * self.precomputed_collocations[phrase] = arr * stop_time = monitor_cpu() # <<<<<<<<<<<<<< * logger.info("Processing precomputations took %f seconds", stop_time - start_time) * */ - __pyx_t_5 = PyFloat_FromDouble(__pyx_f_3_sa_monitor_cpu()); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 463; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyFloat_FromDouble(__pyx_f_3_sa_monitor_cpu()); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 464; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __pyx_v_stop_time = __pyx_t_5; __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":464 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":465 * self.precomputed_collocations[phrase] = arr * stop_time = monitor_cpu() * logger.info("Processing precomputations took %f seconds", stop_time - start_time) # <<<<<<<<<<<<<< * * */ - __pyx_t_5 = __Pyx_GetName(__pyx_m, __pyx_n_s__logger); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 464; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __Pyx_GetName(__pyx_m, __pyx_n_s__logger); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 465; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __pyx_t_4 = PyObject_GetAttr(__pyx_t_5, __pyx_n_s__info); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 464; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_GetAttr(__pyx_t_5, __pyx_n_s__info); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 465; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_5 = PyNumber_Subtract(__pyx_v_stop_time, __pyx_v_start_time); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 464; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyNumber_Subtract(__pyx_v_stop_time, __pyx_v_start_time); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 465; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __pyx_t_2 = PyTuple_New(2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 464; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyTuple_New(2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 465; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_INCREF(((PyObject *)__pyx_kp_s_115)); PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_kp_s_115)); @@ -40277,7 +40272,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py PyTuple_SET_ITEM(__pyx_t_2, 1, __pyx_t_5); __Pyx_GIVEREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_5 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 464; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 465; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; @@ -40319,7 +40314,7 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_11get_precomputed_collo return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":467 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":468 * * * def get_precomputed_collocation(self, phrase): # <<<<<<<<<<<<<< @@ -40341,29 +40336,29 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_10get_precomputed_collo int __pyx_clineno = 0; __Pyx_RefNannySetupContext("get_precomputed_collocation", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":468 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":469 * * def get_precomputed_collocation(self, phrase): * if phrase in self.precomputed_collocations: # <<<<<<<<<<<<<< * arr = self.precomputed_collocations[phrase] * return PhraseLocation(arr=arr, arr_low=0, arr_high=len(arr), num_subpatterns=phrase.arity()+1) */ - __pyx_t_1 = (__Pyx_PySequence_Contains(__pyx_v_phrase, __pyx_v_self->precomputed_collocations, Py_EQ)); if (unlikely(__pyx_t_1 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 468; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = (__Pyx_PySequence_Contains(__pyx_v_phrase, __pyx_v_self->precomputed_collocations, Py_EQ)); if (unlikely(__pyx_t_1 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 469; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":469 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":470 * def get_precomputed_collocation(self, phrase): * if phrase in self.precomputed_collocations: * arr = self.precomputed_collocations[phrase] # <<<<<<<<<<<<<< * return PhraseLocation(arr=arr, arr_low=0, arr_high=len(arr), num_subpatterns=phrase.arity()+1) * return None */ - __pyx_t_2 = PyObject_GetItem(__pyx_v_self->precomputed_collocations, __pyx_v_phrase); if (!__pyx_t_2) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 469; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_GetItem(__pyx_v_self->precomputed_collocations, __pyx_v_phrase); if (!__pyx_t_2) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __pyx_v_arr = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":470 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":471 * if phrase in self.precomputed_collocations: * arr = self.precomputed_collocations[phrase] * return PhraseLocation(arr=arr, arr_low=0, arr_high=len(arr), num_subpatterns=phrase.arity()+1) # <<<<<<<<<<<<<< @@ -40371,26 +40366,26 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_10get_precomputed_collo * */ __Pyx_XDECREF(__pyx_r); - __pyx_t_2 = PyDict_New(); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyDict_New(); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 471; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_2)); - if (PyDict_SetItem(__pyx_t_2, ((PyObject *)__pyx_n_s__arr), __pyx_v_arr) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (PyDict_SetItem(__pyx_t_2, ((PyObject *)__pyx_n_s__arr_low), __pyx_int_0) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_3 = PyObject_Length(__pyx_v_arr); if (unlikely(__pyx_t_3 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_4 = PyInt_FromSsize_t(__pyx_t_3); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_2, ((PyObject *)__pyx_n_s__arr), __pyx_v_arr) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 471; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_2, ((PyObject *)__pyx_n_s__arr_low), __pyx_int_0) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 471; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_Length(__pyx_v_arr); if (unlikely(__pyx_t_3 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 471; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyInt_FromSsize_t(__pyx_t_3); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 471; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - if (PyDict_SetItem(__pyx_t_2, ((PyObject *)__pyx_n_s__arr_high), __pyx_t_4) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_2, ((PyObject *)__pyx_n_s__arr_high), __pyx_t_4) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 471; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - __pyx_t_4 = PyObject_GetAttr(__pyx_v_phrase, __pyx_n_s__arity); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_GetAttr(__pyx_v_phrase, __pyx_n_s__arity); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 471; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_5 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 471; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - __pyx_t_4 = PyNumber_Add(__pyx_t_5, __pyx_int_1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyNumber_Add(__pyx_t_5, __pyx_int_1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 471; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - if (PyDict_SetItem(__pyx_t_2, ((PyObject *)__pyx_n_s__num_subpatterns), __pyx_t_4) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_2, ((PyObject *)__pyx_n_s__num_subpatterns), __pyx_t_4) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 471; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - __pyx_t_4 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_PhraseLocation)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_2)); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_PhraseLocation)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_2)); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 471; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; __pyx_r = __pyx_t_4; @@ -40400,7 +40395,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_10get_precomputed_collo } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":471 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":472 * arr = self.precomputed_collocations[phrase] * return PhraseLocation(arr=arr, arr_low=0, arr_high=len(arr), num_subpatterns=phrase.arity()+1) * return None # <<<<<<<<<<<<<< @@ -40427,7 +40422,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_10get_precomputed_collo return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":474 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":475 * * * cdef int* baeza_yates_helper(self, int low1, int high1, int* arr1, int step1, # <<<<<<<<<<<<<< @@ -40473,7 +40468,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p int __pyx_clineno = 0; __Pyx_RefNannySetupContext("baeza_yates_helper", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":487 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":488 * cdef Matching loc1, loc2 * * result = <int*> malloc(0*sizeof(int*)) # <<<<<<<<<<<<<< @@ -40482,7 +40477,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_result = ((int *)malloc((0 * (sizeof(int *))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":489 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":490 * result = <int*> malloc(0*sizeof(int*)) * * d_first = 0 # <<<<<<<<<<<<<< @@ -40491,7 +40486,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_d_first = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":490 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":491 * * d_first = 0 * if high1 - low1 > high2 - low2: # <<<<<<<<<<<<<< @@ -40501,7 +40496,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_1 = ((__pyx_v_high1 - __pyx_v_low1) > (__pyx_v_high2 - __pyx_v_low2)); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":491 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":492 * d_first = 0 * if high1 - low1 > high2 - low2: * d_first = 1 # <<<<<<<<<<<<<< @@ -40513,7 +40508,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":495 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":496 * # First, check to see if we are at any of the recursive base cases * # Case 1: one of the sets is empty * if low1 >= high1 or low2 >= high2: # <<<<<<<<<<<<<< @@ -40529,7 +40524,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":496 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":497 * # Case 1: one of the sets is empty * if low1 >= high1 or low2 >= high2: * return result # <<<<<<<<<<<<<< @@ -40542,7 +40537,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":499 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":500 * * # Case 2: sets are non-overlapping * assign_matching(&loc1, arr1, high1-step1, step1, self.fda.sent_id.arr) # <<<<<<<<<<<<<< @@ -40551,7 +40546,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_f_3_sa_assign_matching((&__pyx_v_loc1), __pyx_v_arr1, (__pyx_v_high1 - __pyx_v_step1), __pyx_v_step1, __pyx_v_self->fda->sent_id->arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":500 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":501 * # Case 2: sets are non-overlapping * assign_matching(&loc1, arr1, high1-step1, step1, self.fda.sent_id.arr) * assign_matching(&loc2, arr2, low2, step2, self.fda.sent_id.arr) # <<<<<<<<<<<<<< @@ -40560,7 +40555,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_f_3_sa_assign_matching((&__pyx_v_loc2), __pyx_v_arr2, __pyx_v_low2, __pyx_v_step2, __pyx_v_self->fda->sent_id->arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":501 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":502 * assign_matching(&loc1, arr1, high1-step1, step1, self.fda.sent_id.arr) * assign_matching(&loc2, arr2, low2, step2, self.fda.sent_id.arr) * if self.compare_matchings(&loc1, &loc2, offset_by_one, len_last) == -1: # <<<<<<<<<<<<<< @@ -40570,7 +40565,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_3 = (((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->compare_matchings(__pyx_v_self, (&__pyx_v_loc1), (&__pyx_v_loc2), __pyx_v_offset_by_one, __pyx_v_len_last) == -1); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":502 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":503 * assign_matching(&loc2, arr2, low2, step2, self.fda.sent_id.arr) * if self.compare_matchings(&loc1, &loc2, offset_by_one, len_last) == -1: * return result # <<<<<<<<<<<<<< @@ -40583,7 +40578,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":504 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":505 * return result * * assign_matching(&loc1, arr1, low1, step1, self.fda.sent_id.arr) # <<<<<<<<<<<<<< @@ -40592,7 +40587,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_f_3_sa_assign_matching((&__pyx_v_loc1), __pyx_v_arr1, __pyx_v_low1, __pyx_v_step1, __pyx_v_self->fda->sent_id->arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":505 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":506 * * assign_matching(&loc1, arr1, low1, step1, self.fda.sent_id.arr) * assign_matching(&loc2, arr2, high2-step2, step2, self.fda.sent_id.arr) # <<<<<<<<<<<<<< @@ -40601,7 +40596,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_f_3_sa_assign_matching((&__pyx_v_loc2), __pyx_v_arr2, (__pyx_v_high2 - __pyx_v_step2), __pyx_v_step2, __pyx_v_self->fda->sent_id->arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":506 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":507 * assign_matching(&loc1, arr1, low1, step1, self.fda.sent_id.arr) * assign_matching(&loc2, arr2, high2-step2, step2, self.fda.sent_id.arr) * if self.compare_matchings(&loc1, &loc2, offset_by_one, len_last) == 1: # <<<<<<<<<<<<<< @@ -40611,7 +40606,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_3 = (((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->compare_matchings(__pyx_v_self, (&__pyx_v_loc1), (&__pyx_v_loc2), __pyx_v_offset_by_one, __pyx_v_len_last) == 1); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":507 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":508 * assign_matching(&loc2, arr2, high2-step2, step2, self.fda.sent_id.arr) * if self.compare_matchings(&loc1, &loc2, offset_by_one, len_last) == 1: * return result # <<<<<<<<<<<<<< @@ -40624,7 +40619,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } __pyx_L6:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":511 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":512 * # Case 3: query set and data set do not meet size mismatch constraints; * # We use mergesort instead in this case * qsetsize = (high1-low1) / step1 # <<<<<<<<<<<<<< @@ -40634,15 +40629,15 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_4 = (__pyx_v_high1 - __pyx_v_low1); if (unlikely(__pyx_v_step1 == 0)) { PyErr_Format(PyExc_ZeroDivisionError, "integer division or modulo by zero"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 511; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 512; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } else if (sizeof(int) == sizeof(long) && unlikely(__pyx_v_step1 == -1) && unlikely(UNARY_NEG_WOULD_OVERFLOW(__pyx_t_4))) { PyErr_Format(PyExc_OverflowError, "value too large to perform division"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 511; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 512; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_v_qsetsize = __Pyx_div_int(__pyx_t_4, __pyx_v_step1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":512 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":513 * # We use mergesort instead in this case * qsetsize = (high1-low1) / step1 * dsetsize = (high2-low2) / step2 # <<<<<<<<<<<<<< @@ -40652,15 +40647,15 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_4 = (__pyx_v_high2 - __pyx_v_low2); if (unlikely(__pyx_v_step2 == 0)) { PyErr_Format(PyExc_ZeroDivisionError, "integer division or modulo by zero"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 512; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 513; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } else if (sizeof(int) == sizeof(long) && unlikely(__pyx_v_step2 == -1) && unlikely(UNARY_NEG_WOULD_OVERFLOW(__pyx_t_4))) { PyErr_Format(PyExc_OverflowError, "value too large to perform division"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 512; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 513; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_v_dsetsize = __Pyx_div_int(__pyx_t_4, __pyx_v_step2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":513 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":514 * qsetsize = (high1-low1) / step1 * dsetsize = (high2-low2) / step2 * if d_first: # <<<<<<<<<<<<<< @@ -40669,7 +40664,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ if (__pyx_v_d_first) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":514 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":515 * dsetsize = (high2-low2) / step2 * if d_first: * tmp = qsetsize # <<<<<<<<<<<<<< @@ -40678,7 +40673,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_tmp = __pyx_v_qsetsize; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":515 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":516 * if d_first: * tmp = qsetsize * qsetsize = dsetsize # <<<<<<<<<<<<<< @@ -40687,7 +40682,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_qsetsize = __pyx_v_dsetsize; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":516 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":517 * tmp = qsetsize * qsetsize = dsetsize * dsetsize = tmp # <<<<<<<<<<<<<< @@ -40699,7 +40694,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } __pyx_L7:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":518 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":519 * dsetsize = tmp * * if self.by_slack_factor * qsetsize * log(dsetsize) / log(2) > dsetsize: # <<<<<<<<<<<<<< @@ -40710,12 +40705,12 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_6 = log(2.0); if (unlikely(__pyx_t_6 == 0)) { PyErr_Format(PyExc_ZeroDivisionError, "float division"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 518; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 519; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_t_3 = ((__pyx_t_5 / __pyx_t_6) > __pyx_v_dsetsize); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":519 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":520 * * if self.by_slack_factor * qsetsize * log(dsetsize) / log(2) > dsetsize: * free(result) # <<<<<<<<<<<<<< @@ -40724,7 +40719,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ free(__pyx_v_result); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":520 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":521 * if self.by_slack_factor * qsetsize * log(dsetsize) / log(2) > dsetsize: * free(result) * return self.merge_helper(low1, high1, arr1, step1, low2, high2, arr2, step2, offset_by_one, len_last, num_subpatterns, result_len) # <<<<<<<<<<<<<< @@ -40737,7 +40732,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } __pyx_L8:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":524 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":525 * # binary search. There are two flavors, depending on * # whether the queryset or dataset is first * if d_first: # <<<<<<<<<<<<<< @@ -40746,7 +40741,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ if (__pyx_v_d_first) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":525 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":526 * # whether the queryset or dataset is first * if d_first: * med2 = median(low2, high2, step2) # <<<<<<<<<<<<<< @@ -40755,7 +40750,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_med2 = __pyx_f_3_sa_median(__pyx_v_low2, __pyx_v_high2, __pyx_v_step2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":526 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":527 * if d_first: * med2 = median(low2, high2, step2) * assign_matching(&loc2, arr2, med2, step2, self.fda.sent_id.arr) # <<<<<<<<<<<<<< @@ -40764,7 +40759,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_f_3_sa_assign_matching((&__pyx_v_loc2), __pyx_v_arr2, __pyx_v_med2, __pyx_v_step2, __pyx_v_self->fda->sent_id->arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":528 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":529 * assign_matching(&loc2, arr2, med2, step2, self.fda.sent_id.arr) * * search_low = low1 # <<<<<<<<<<<<<< @@ -40773,7 +40768,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_search_low = __pyx_v_low1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":529 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":530 * * search_low = low1 * search_high = high1 # <<<<<<<<<<<<<< @@ -40782,7 +40777,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_search_high = __pyx_v_high1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":530 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":531 * search_low = low1 * search_high = high1 * while search_low < search_high: # <<<<<<<<<<<<<< @@ -40793,7 +40788,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_3 = (__pyx_v_search_low < __pyx_v_search_high); if (!__pyx_t_3) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":531 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":532 * search_high = high1 * while search_low < search_high: * med1 = median(search_low, search_high, step1) # <<<<<<<<<<<<<< @@ -40802,7 +40797,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_med1 = __pyx_f_3_sa_median(__pyx_v_search_low, __pyx_v_search_high, __pyx_v_step1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":532 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":533 * while search_low < search_high: * med1 = median(search_low, search_high, step1) * find_comparable_matchings(low1, high1, arr1, step1, med1, &med1_minus, &med1_plus) # <<<<<<<<<<<<<< @@ -40811,7 +40806,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_f_3_sa_find_comparable_matchings(__pyx_v_low1, __pyx_v_high1, __pyx_v_arr1, __pyx_v_step1, __pyx_v_med1, (&__pyx_v_med1_minus), (&__pyx_v_med1_plus)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":533 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":534 * med1 = median(search_low, search_high, step1) * find_comparable_matchings(low1, high1, arr1, step1, med1, &med1_minus, &med1_plus) * comparison = self.compare_matchings_set(med1_minus, med1_plus, arr1, step1, &loc2, offset_by_one, len_last) # <<<<<<<<<<<<<< @@ -40820,7 +40815,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_comparison = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->compare_matchings_set(__pyx_v_self, __pyx_v_med1_minus, __pyx_v_med1_plus, __pyx_v_arr1, __pyx_v_step1, (&__pyx_v_loc2), __pyx_v_offset_by_one, __pyx_v_len_last); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":536 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":537 * if comparison == -1: * search_low = med1_plus * elif comparison == 1: # <<<<<<<<<<<<<< @@ -40829,7 +40824,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ switch (__pyx_v_comparison) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":534 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":535 * find_comparable_matchings(low1, high1, arr1, step1, med1, &med1_minus, &med1_plus) * comparison = self.compare_matchings_set(med1_minus, med1_plus, arr1, step1, &loc2, offset_by_one, len_last) * if comparison == -1: # <<<<<<<<<<<<<< @@ -40838,7 +40833,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ case -1: - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":535 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":536 * comparison = self.compare_matchings_set(med1_minus, med1_plus, arr1, step1, &loc2, offset_by_one, len_last) * if comparison == -1: * search_low = med1_plus # <<<<<<<<<<<<<< @@ -40848,7 +40843,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_v_search_low = __pyx_v_med1_plus; break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":536 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":537 * if comparison == -1: * search_low = med1_plus * elif comparison == 1: # <<<<<<<<<<<<<< @@ -40857,7 +40852,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ case 1: - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":537 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":538 * search_low = med1_plus * elif comparison == 1: * search_high = med1_minus # <<<<<<<<<<<<<< @@ -40868,7 +40863,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p break; default: - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":539 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":540 * search_high = med1_minus * else: * break # <<<<<<<<<<<<<< @@ -40884,7 +40879,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":541 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":542 * break * else: * med1 = median(low1, high1, step1) # <<<<<<<<<<<<<< @@ -40893,7 +40888,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_med1 = __pyx_f_3_sa_median(__pyx_v_low1, __pyx_v_high1, __pyx_v_step1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":542 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":543 * else: * med1 = median(low1, high1, step1) * find_comparable_matchings(low1, high1, arr1, step1, med1, &med1_minus, &med1_plus) # <<<<<<<<<<<<<< @@ -40902,7 +40897,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_f_3_sa_find_comparable_matchings(__pyx_v_low1, __pyx_v_high1, __pyx_v_arr1, __pyx_v_step1, __pyx_v_med1, (&__pyx_v_med1_minus), (&__pyx_v_med1_plus)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":544 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":545 * find_comparable_matchings(low1, high1, arr1, step1, med1, &med1_minus, &med1_plus) * * search_low = low2 # <<<<<<<<<<<<<< @@ -40911,7 +40906,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_search_low = __pyx_v_low2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":545 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":546 * * search_low = low2 * search_high = high2 # <<<<<<<<<<<<<< @@ -40920,7 +40915,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_search_high = __pyx_v_high2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":546 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":547 * search_low = low2 * search_high = high2 * while search_low < search_high: # <<<<<<<<<<<<<< @@ -40931,7 +40926,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_3 = (__pyx_v_search_low < __pyx_v_search_high); if (!__pyx_t_3) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":547 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":548 * search_high = high2 * while search_low < search_high: * med2 = median(search_low, search_high, step2) # <<<<<<<<<<<<<< @@ -40940,7 +40935,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_med2 = __pyx_f_3_sa_median(__pyx_v_search_low, __pyx_v_search_high, __pyx_v_step2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":548 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":549 * while search_low < search_high: * med2 = median(search_low, search_high, step2) * assign_matching(&loc2, arr2, med2, step2, self.fda.sent_id.arr) # <<<<<<<<<<<<<< @@ -40949,7 +40944,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_f_3_sa_assign_matching((&__pyx_v_loc2), __pyx_v_arr2, __pyx_v_med2, __pyx_v_step2, __pyx_v_self->fda->sent_id->arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":549 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":550 * med2 = median(search_low, search_high, step2) * assign_matching(&loc2, arr2, med2, step2, self.fda.sent_id.arr) * comparison = self.compare_matchings_set(med1_minus, med1_plus, arr1, step1, &loc2, offset_by_one, len_last) # <<<<<<<<<<<<<< @@ -40958,7 +40953,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_comparison = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->compare_matchings_set(__pyx_v_self, __pyx_v_med1_minus, __pyx_v_med1_plus, __pyx_v_arr1, __pyx_v_step1, (&__pyx_v_loc2), __pyx_v_offset_by_one, __pyx_v_len_last); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":552 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":553 * if comparison == -1: * search_high = med2 * elif comparison == 1: # <<<<<<<<<<<<<< @@ -40967,7 +40962,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ switch (__pyx_v_comparison) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":550 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":551 * assign_matching(&loc2, arr2, med2, step2, self.fda.sent_id.arr) * comparison = self.compare_matchings_set(med1_minus, med1_plus, arr1, step1, &loc2, offset_by_one, len_last) * if comparison == -1: # <<<<<<<<<<<<<< @@ -40976,7 +40971,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ case -1: - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":551 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":552 * comparison = self.compare_matchings_set(med1_minus, med1_plus, arr1, step1, &loc2, offset_by_one, len_last) * if comparison == -1: * search_high = med2 # <<<<<<<<<<<<<< @@ -40986,7 +40981,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_v_search_high = __pyx_v_med2; break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":552 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":553 * if comparison == -1: * search_high = med2 * elif comparison == 1: # <<<<<<<<<<<<<< @@ -40995,7 +40990,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ case 1: - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":553 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":554 * search_high = med2 * elif comparison == 1: * search_low = med2 + step2 # <<<<<<<<<<<<<< @@ -41006,7 +41001,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p break; default: - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":555 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":556 * search_low = med2 + step2 * else: * break # <<<<<<<<<<<<<< @@ -41021,7 +41016,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } __pyx_L9:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":557 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":558 * break * * med_result_len = 0 # <<<<<<<<<<<<<< @@ -41030,7 +41025,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_med_result_len = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":558 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":559 * * med_result_len = 0 * med_result = <int*> malloc(0*sizeof(int*)) # <<<<<<<<<<<<<< @@ -41039,7 +41034,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_med_result = ((int *)malloc((0 * (sizeof(int *))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":559 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":560 * med_result_len = 0 * med_result = <int*> malloc(0*sizeof(int*)) * if search_high > search_low: # <<<<<<<<<<<<<< @@ -41049,7 +41044,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_3 = (__pyx_v_search_high > __pyx_v_search_low); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":565 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":566 * # want to store the bindings for all of those elements. We can * # subsequently throw all of them away. * med2_minus = med2 # <<<<<<<<<<<<<< @@ -41058,7 +41053,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_med2_minus = __pyx_v_med2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":566 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":567 * # subsequently throw all of them away. * med2_minus = med2 * med2_plus = med2 + step2 # <<<<<<<<<<<<<< @@ -41067,7 +41062,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_med2_plus = (__pyx_v_med2 + __pyx_v_step2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":567 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":568 * med2_minus = med2 * med2_plus = med2 + step2 * i1 = med1_minus # <<<<<<<<<<<<<< @@ -41076,7 +41071,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_i1 = __pyx_v_med1_minus; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":568 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":569 * med2_plus = med2 + step2 * i1 = med1_minus * while i1 < med1_plus: # <<<<<<<<<<<<<< @@ -41087,7 +41082,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_3 = (__pyx_v_i1 < __pyx_v_med1_plus); if (!__pyx_t_3) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":569 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":570 * i1 = med1_minus * while i1 < med1_plus: * assign_matching(&loc1, arr1, i1, step1, self.fda.sent_id.arr) # <<<<<<<<<<<<<< @@ -41096,7 +41091,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_f_3_sa_assign_matching((&__pyx_v_loc1), __pyx_v_arr1, __pyx_v_i1, __pyx_v_step1, __pyx_v_self->fda->sent_id->arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":570 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":571 * while i1 < med1_plus: * assign_matching(&loc1, arr1, i1, step1, self.fda.sent_id.arr) * while med2_minus-step2 >= low2: # <<<<<<<<<<<<<< @@ -41107,7 +41102,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_3 = ((__pyx_v_med2_minus - __pyx_v_step2) >= __pyx_v_low2); if (!__pyx_t_3) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":571 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":572 * assign_matching(&loc1, arr1, i1, step1, self.fda.sent_id.arr) * while med2_minus-step2 >= low2: * assign_matching(&loc2, arr2, med2_minus-step2, step2, self.fda.sent_id.arr) # <<<<<<<<<<<<<< @@ -41116,7 +41111,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_f_3_sa_assign_matching((&__pyx_v_loc2), __pyx_v_arr2, (__pyx_v_med2_minus - __pyx_v_step2), __pyx_v_step2, __pyx_v_self->fda->sent_id->arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":572 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":573 * while med2_minus-step2 >= low2: * assign_matching(&loc2, arr2, med2_minus-step2, step2, self.fda.sent_id.arr) * if self.compare_matchings(&loc1, &loc2, offset_by_one, len_last) < 1: # <<<<<<<<<<<<<< @@ -41126,7 +41121,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_3 = (((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->compare_matchings(__pyx_v_self, (&__pyx_v_loc1), (&__pyx_v_loc2), __pyx_v_offset_by_one, __pyx_v_len_last) < 1); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":573 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":574 * assign_matching(&loc2, arr2, med2_minus-step2, step2, self.fda.sent_id.arr) * if self.compare_matchings(&loc1, &loc2, offset_by_one, len_last) < 1: * med2_minus = med2_minus - step2 # <<<<<<<<<<<<<< @@ -41138,7 +41133,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":575 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":576 * med2_minus = med2_minus - step2 * else: * break # <<<<<<<<<<<<<< @@ -41151,7 +41146,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } __pyx_L18_break:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":576 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":577 * else: * break * i2 = med2_minus # <<<<<<<<<<<<<< @@ -41160,7 +41155,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_i2 = __pyx_v_med2_minus; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":577 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":578 * break * i2 = med2_minus * while i2 < high2: # <<<<<<<<<<<<<< @@ -41171,7 +41166,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_3 = (__pyx_v_i2 < __pyx_v_high2); if (!__pyx_t_3) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":578 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":579 * i2 = med2_minus * while i2 < high2: * assign_matching(&loc2, arr2, i2, step2, self.fda.sent_id.arr) # <<<<<<<<<<<<<< @@ -41180,7 +41175,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_f_3_sa_assign_matching((&__pyx_v_loc2), __pyx_v_arr2, __pyx_v_i2, __pyx_v_step2, __pyx_v_self->fda->sent_id->arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":579 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":580 * while i2 < high2: * assign_matching(&loc2, arr2, i2, step2, self.fda.sent_id.arr) * comparison = self.compare_matchings(&loc1, &loc2, offset_by_one, len_last) # <<<<<<<<<<<<<< @@ -41189,7 +41184,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_comparison = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->compare_matchings(__pyx_v_self, (&__pyx_v_loc1), (&__pyx_v_loc2), __pyx_v_offset_by_one, __pyx_v_len_last); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":580 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":581 * assign_matching(&loc2, arr2, i2, step2, self.fda.sent_id.arr) * comparison = self.compare_matchings(&loc1, &loc2, offset_by_one, len_last) * if comparison == 0: # <<<<<<<<<<<<<< @@ -41199,7 +41194,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_3 = (__pyx_v_comparison == 0); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":582 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":583 * if comparison == 0: * pass * med_result = append_combined_matching(med_result, &loc1, &loc2, offset_by_one, num_subpatterns, &med_result_len) # <<<<<<<<<<<<<< @@ -41211,7 +41206,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } __pyx_L22:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":583 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":584 * pass * med_result = append_combined_matching(med_result, &loc1, &loc2, offset_by_one, num_subpatterns, &med_result_len) * if comparison == -1: # <<<<<<<<<<<<<< @@ -41221,7 +41216,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_3 = (__pyx_v_comparison == -1); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":584 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":585 * med_result = append_combined_matching(med_result, &loc1, &loc2, offset_by_one, num_subpatterns, &med_result_len) * if comparison == -1: * break # <<<<<<<<<<<<<< @@ -41233,7 +41228,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } __pyx_L23:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":585 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":586 * if comparison == -1: * break * i2 = i2 + step2 # <<<<<<<<<<<<<< @@ -41244,7 +41239,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } __pyx_L21_break:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":586 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":587 * break * i2 = i2 + step2 * if i2 > med2_plus: # <<<<<<<<<<<<<< @@ -41254,7 +41249,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_3 = (__pyx_v_i2 > __pyx_v_med2_plus); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":587 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":588 * i2 = i2 + step2 * if i2 > med2_plus: * med2_plus = i2 # <<<<<<<<<<<<<< @@ -41266,7 +41261,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } __pyx_L24:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":588 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":589 * if i2 > med2_plus: * med2_plus = i2 * i1 = i1 + step1 # <<<<<<<<<<<<<< @@ -41276,7 +41271,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_v_i1 = (__pyx_v_i1 + __pyx_v_step1); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":590 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":591 * i1 = i1 + step1 * * tmp = med1_minus # <<<<<<<<<<<<<< @@ -41285,7 +41280,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_tmp = __pyx_v_med1_minus; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":591 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":592 * * tmp = med1_minus * med1_minus = med1_plus # <<<<<<<<<<<<<< @@ -41294,7 +41289,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_med1_minus = __pyx_v_med1_plus; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":592 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":593 * tmp = med1_minus * med1_minus = med1_plus * med1_plus = tmp # <<<<<<<<<<<<<< @@ -41306,7 +41301,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":595 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":596 * else: * # No match; need to figure out the point of division in D and Q * med2_minus = med2 # <<<<<<<<<<<<<< @@ -41315,7 +41310,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_med2_minus = __pyx_v_med2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":596 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":597 * # No match; need to figure out the point of division in D and Q * med2_minus = med2 * med2_plus = med2 # <<<<<<<<<<<<<< @@ -41324,7 +41319,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_med2_plus = __pyx_v_med2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":597 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":598 * med2_minus = med2 * med2_plus = med2 * if d_first: # <<<<<<<<<<<<<< @@ -41333,7 +41328,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ if (__pyx_v_d_first) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":598 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":599 * med2_plus = med2 * if d_first: * med2_minus = med2_minus + step2 # <<<<<<<<<<<<<< @@ -41342,7 +41337,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_med2_minus = (__pyx_v_med2_minus + __pyx_v_step2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":599 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":600 * if d_first: * med2_minus = med2_minus + step2 * if comparison == -1: # <<<<<<<<<<<<<< @@ -41352,7 +41347,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_3 = (__pyx_v_comparison == -1); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":600 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":601 * med2_minus = med2_minus + step2 * if comparison == -1: * med1_minus = med1_plus # <<<<<<<<<<<<<< @@ -41364,7 +41359,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } __pyx_L26:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":601 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":602 * if comparison == -1: * med1_minus = med1_plus * if comparison == 1: # <<<<<<<<<<<<<< @@ -41374,7 +41369,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_3 = (__pyx_v_comparison == 1); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":602 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":603 * med1_minus = med1_plus * if comparison == 1: * med1_plus = med1_minus # <<<<<<<<<<<<<< @@ -41389,7 +41384,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":604 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":605 * med1_plus = med1_minus * else: * tmp = med1_minus # <<<<<<<<<<<<<< @@ -41398,7 +41393,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_tmp = __pyx_v_med1_minus; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":605 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":606 * else: * tmp = med1_minus * med1_minus = med1_plus # <<<<<<<<<<<<<< @@ -41407,7 +41402,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_med1_minus = __pyx_v_med1_plus; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":606 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":607 * tmp = med1_minus * med1_minus = med1_plus * med1_plus = tmp # <<<<<<<<<<<<<< @@ -41416,7 +41411,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_med1_plus = __pyx_v_tmp; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":607 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":608 * med1_minus = med1_plus * med1_plus = tmp * if comparison == 1: # <<<<<<<<<<<<<< @@ -41426,7 +41421,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p __pyx_t_3 = (__pyx_v_comparison == 1); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":608 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":609 * med1_plus = tmp * if comparison == 1: * med2_minus = med2_minus + step2 # <<<<<<<<<<<<<< @@ -41435,7 +41430,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_med2_minus = (__pyx_v_med2_minus + __pyx_v_step2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":609 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":610 * if comparison == 1: * med2_minus = med2_minus + step2 * med2_plus = med2_plus + step2 # <<<<<<<<<<<<<< @@ -41451,7 +41446,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p } __pyx_L14:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":611 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":612 * med2_plus = med2_plus + step2 * * low_result_len = 0 # <<<<<<<<<<<<<< @@ -41460,7 +41455,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_low_result_len = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":612 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":613 * * low_result_len = 0 * low_result = self.baeza_yates_helper(low1, med1_plus, arr1, step1, low2, med2_plus, arr2, step2, offset_by_one, len_last, num_subpatterns, &low_result_len) # <<<<<<<<<<<<<< @@ -41469,7 +41464,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_low_result = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->baeza_yates_helper(__pyx_v_self, __pyx_v_low1, __pyx_v_med1_plus, __pyx_v_arr1, __pyx_v_step1, __pyx_v_low2, __pyx_v_med2_plus, __pyx_v_arr2, __pyx_v_step2, __pyx_v_offset_by_one, __pyx_v_len_last, __pyx_v_num_subpatterns, (&__pyx_v_low_result_len)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":613 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":614 * low_result_len = 0 * low_result = self.baeza_yates_helper(low1, med1_plus, arr1, step1, low2, med2_plus, arr2, step2, offset_by_one, len_last, num_subpatterns, &low_result_len) * high_result_len = 0 # <<<<<<<<<<<<<< @@ -41478,7 +41473,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_high_result_len = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":614 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":615 * low_result = self.baeza_yates_helper(low1, med1_plus, arr1, step1, low2, med2_plus, arr2, step2, offset_by_one, len_last, num_subpatterns, &low_result_len) * high_result_len = 0 * high_result = self.baeza_yates_helper(med1_minus, high1, arr1, step1, med2_minus, high2, arr2, step2, offset_by_one, len_last, num_subpatterns, &high_result_len) # <<<<<<<<<<<<<< @@ -41487,7 +41482,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_high_result = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->baeza_yates_helper(__pyx_v_self, __pyx_v_med1_minus, __pyx_v_high1, __pyx_v_arr1, __pyx_v_step1, __pyx_v_med2_minus, __pyx_v_high2, __pyx_v_arr2, __pyx_v_step2, __pyx_v_offset_by_one, __pyx_v_len_last, __pyx_v_num_subpatterns, (&__pyx_v_high_result_len)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":616 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":617 * high_result = self.baeza_yates_helper(med1_minus, high1, arr1, step1, med2_minus, high2, arr2, step2, offset_by_one, len_last, num_subpatterns, &high_result_len) * * result = extend_arr(result, result_len, low_result, low_result_len) # <<<<<<<<<<<<<< @@ -41496,7 +41491,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_result = __pyx_f_3_sa_extend_arr(__pyx_v_result, __pyx_v_result_len, __pyx_v_low_result, __pyx_v_low_result_len); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":617 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":618 * * result = extend_arr(result, result_len, low_result, low_result_len) * result = extend_arr(result, result_len, med_result, med_result_len) # <<<<<<<<<<<<<< @@ -41505,7 +41500,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_result = __pyx_f_3_sa_extend_arr(__pyx_v_result, __pyx_v_result_len, __pyx_v_med_result, __pyx_v_med_result_len); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":618 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":619 * result = extend_arr(result, result_len, low_result, low_result_len) * result = extend_arr(result, result_len, med_result, med_result_len) * result = extend_arr(result, result_len, high_result, high_result_len) # <<<<<<<<<<<<<< @@ -41514,7 +41509,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ __pyx_v_result = __pyx_f_3_sa_extend_arr(__pyx_v_result, __pyx_v_result_len, __pyx_v_high_result, __pyx_v_high_result_len); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":619 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":620 * result = extend_arr(result, result_len, med_result, med_result_len) * result = extend_arr(result, result_len, high_result, high_result_len) * free(low_result) # <<<<<<<<<<<<<< @@ -41523,7 +41518,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ free(__pyx_v_low_result); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":620 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":621 * result = extend_arr(result, result_len, high_result, high_result_len) * free(low_result) * free(med_result) # <<<<<<<<<<<<<< @@ -41532,7 +41527,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ free(__pyx_v_med_result); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":621 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":622 * free(low_result) * free(med_result) * free(high_result) # <<<<<<<<<<<<<< @@ -41541,7 +41536,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p */ free(__pyx_v_high_result); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":623 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":624 * free(high_result) * * return result # <<<<<<<<<<<<<< @@ -41561,7 +41556,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_baeza_yates_helper(struct __p return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":627 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":628 * * * cdef long compare_matchings_set(self, int i1_minus, int i1_plus, int* arr1, int step1, # <<<<<<<<<<<<<< @@ -41580,7 +41575,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings_set(struct int __pyx_t_1; __Pyx_RefNannySetupContext("compare_matchings_set", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":638 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":639 * cdef Matching* loc1 * * loc1 = &l1_stack # <<<<<<<<<<<<<< @@ -41589,7 +41584,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings_set(struct */ __pyx_v_loc1 = (&__pyx_v_l1_stack); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":640 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":641 * loc1 = &l1_stack * * i1 = i1_minus # <<<<<<<<<<<<<< @@ -41598,7 +41593,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings_set(struct */ __pyx_v_i1 = __pyx_v_i1_minus; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":641 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":642 * * i1 = i1_minus * while i1 < i1_plus: # <<<<<<<<<<<<<< @@ -41609,7 +41604,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings_set(struct __pyx_t_1 = (__pyx_v_i1 < __pyx_v_i1_plus); if (!__pyx_t_1) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":642 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":643 * i1 = i1_minus * while i1 < i1_plus: * assign_matching(loc1, arr1, i1, step1, self.fda.sent_id.arr) # <<<<<<<<<<<<<< @@ -41618,7 +41613,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings_set(struct */ __pyx_f_3_sa_assign_matching(__pyx_v_loc1, __pyx_v_arr1, __pyx_v_i1, __pyx_v_step1, __pyx_v_self->fda->sent_id->arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":643 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":644 * while i1 < i1_plus: * assign_matching(loc1, arr1, i1, step1, self.fda.sent_id.arr) * comparison = self.compare_matchings(loc1, loc2, offset_by_one, len_last) # <<<<<<<<<<<<<< @@ -41627,7 +41622,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings_set(struct */ __pyx_v_comparison = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->compare_matchings(__pyx_v_self, __pyx_v_loc1, __pyx_v_loc2, __pyx_v_offset_by_one, __pyx_v_len_last); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":644 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":645 * assign_matching(loc1, arr1, i1, step1, self.fda.sent_id.arr) * comparison = self.compare_matchings(loc1, loc2, offset_by_one, len_last) * if comparison == 0: # <<<<<<<<<<<<<< @@ -41637,7 +41632,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings_set(struct __pyx_t_1 = (__pyx_v_comparison == 0); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":645 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":646 * comparison = self.compare_matchings(loc1, loc2, offset_by_one, len_last) * if comparison == 0: * prev_comparison = 0 # <<<<<<<<<<<<<< @@ -41646,7 +41641,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings_set(struct */ __pyx_v_prev_comparison = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":646 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":647 * if comparison == 0: * prev_comparison = 0 * break # <<<<<<<<<<<<<< @@ -41657,7 +41652,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings_set(struct goto __pyx_L5; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":647 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":648 * prev_comparison = 0 * break * elif i1 == i1_minus: # <<<<<<<<<<<<<< @@ -41667,7 +41662,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings_set(struct __pyx_t_1 = (__pyx_v_i1 == __pyx_v_i1_minus); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":648 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":649 * break * elif i1 == i1_minus: * prev_comparison = comparison # <<<<<<<<<<<<<< @@ -41679,7 +41674,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings_set(struct } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":650 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":651 * prev_comparison = comparison * else: * if comparison != prev_comparison: # <<<<<<<<<<<<<< @@ -41689,7 +41684,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings_set(struct __pyx_t_1 = (__pyx_v_comparison != __pyx_v_prev_comparison); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":651 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":652 * else: * if comparison != prev_comparison: * prev_comparison = 0 # <<<<<<<<<<<<<< @@ -41698,7 +41693,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings_set(struct */ __pyx_v_prev_comparison = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":652 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":653 * if comparison != prev_comparison: * prev_comparison = 0 * break # <<<<<<<<<<<<<< @@ -41712,7 +41707,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings_set(struct } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":653 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":654 * prev_comparison = 0 * break * i1 = i1 + step1 # <<<<<<<<<<<<<< @@ -41723,7 +41718,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings_set(struct } __pyx_L4_break:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":654 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":655 * break * i1 = i1 + step1 * return prev_comparison # <<<<<<<<<<<<<< @@ -41739,7 +41734,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings_set(struct return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":657 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":658 * * * cdef long compare_matchings(self, Matching* loc1, Matching* loc2, int offset_by_one, int len_last): # <<<<<<<<<<<<<< @@ -41757,7 +41752,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py int __pyx_t_4; __Pyx_RefNannySetupContext("compare_matchings", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":660 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":661 * cdef int i * * if loc1.sent_id > loc2.sent_id: # <<<<<<<<<<<<<< @@ -41767,7 +41762,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py __pyx_t_1 = (__pyx_v_loc1->sent_id > __pyx_v_loc2->sent_id); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":661 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":662 * * if loc1.sent_id > loc2.sent_id: * return 1 # <<<<<<<<<<<<<< @@ -41780,7 +41775,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":662 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":663 * if loc1.sent_id > loc2.sent_id: * return 1 * if loc2.sent_id > loc1.sent_id: # <<<<<<<<<<<<<< @@ -41790,7 +41785,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py __pyx_t_1 = (__pyx_v_loc2->sent_id > __pyx_v_loc1->sent_id); if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":663 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":664 * return 1 * if loc2.sent_id > loc1.sent_id: * return -1 # <<<<<<<<<<<<<< @@ -41803,7 +41798,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":665 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":666 * return -1 * * if loc1.size == 1 and loc2.size == 1: # <<<<<<<<<<<<<< @@ -41819,7 +41814,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py } if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":666 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":667 * * if loc1.size == 1 and loc2.size == 1: * if loc2.arr[loc2.start] - loc1.arr[loc1.start] <= self.train_min_gap_size: # <<<<<<<<<<<<<< @@ -41829,7 +41824,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py __pyx_t_3 = (((__pyx_v_loc2->arr[__pyx_v_loc2->start]) - (__pyx_v_loc1->arr[__pyx_v_loc1->start])) <= __pyx_v_self->train_min_gap_size); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":667 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":668 * if loc1.size == 1 and loc2.size == 1: * if loc2.arr[loc2.start] - loc1.arr[loc1.start] <= self.train_min_gap_size: * return 1 # <<<<<<<<<<<<<< @@ -41844,7 +41839,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py goto __pyx_L5; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":669 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":670 * return 1 * * elif offset_by_one: # <<<<<<<<<<<<<< @@ -41853,7 +41848,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py */ if (__pyx_v_offset_by_one) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":670 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":671 * * elif offset_by_one: * for i from 1 <= i < loc1.size: # <<<<<<<<<<<<<< @@ -41863,7 +41858,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py __pyx_t_4 = __pyx_v_loc1->size; for (__pyx_v_i = 1; __pyx_v_i < __pyx_t_4; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":671 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":672 * elif offset_by_one: * for i from 1 <= i < loc1.size: * if loc1.arr[loc1.start+i] > loc2.arr[loc2.start+i-1]: # <<<<<<<<<<<<<< @@ -41873,7 +41868,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py __pyx_t_3 = ((__pyx_v_loc1->arr[(__pyx_v_loc1->start + __pyx_v_i)]) > (__pyx_v_loc2->arr[((__pyx_v_loc2->start + __pyx_v_i) - 1)])); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":672 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":673 * for i from 1 <= i < loc1.size: * if loc1.arr[loc1.start+i] > loc2.arr[loc2.start+i-1]: * return 1 # <<<<<<<<<<<<<< @@ -41886,7 +41881,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py } __pyx_L9:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":673 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":674 * if loc1.arr[loc1.start+i] > loc2.arr[loc2.start+i-1]: * return 1 * if loc1.arr[loc1.start+i] < loc2.arr[loc2.start+i-1]: # <<<<<<<<<<<<<< @@ -41896,7 +41891,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py __pyx_t_3 = ((__pyx_v_loc1->arr[(__pyx_v_loc1->start + __pyx_v_i)]) < (__pyx_v_loc2->arr[((__pyx_v_loc2->start + __pyx_v_i) - 1)])); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":674 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":675 * return 1 * if loc1.arr[loc1.start+i] < loc2.arr[loc2.start+i-1]: * return -1 # <<<<<<<<<<<<<< @@ -41913,7 +41908,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":677 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":678 * * else: * if loc1.arr[loc1.start]+1 > loc2.arr[loc2.start]: # <<<<<<<<<<<<<< @@ -41923,7 +41918,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py __pyx_t_3 = (((__pyx_v_loc1->arr[__pyx_v_loc1->start]) + 1) > (__pyx_v_loc2->arr[__pyx_v_loc2->start])); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":678 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":679 * else: * if loc1.arr[loc1.start]+1 > loc2.arr[loc2.start]: * return 1 # <<<<<<<<<<<<<< @@ -41936,7 +41931,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py } __pyx_L11:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":679 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":680 * if loc1.arr[loc1.start]+1 > loc2.arr[loc2.start]: * return 1 * if loc1.arr[loc1.start]+1 < loc2.arr[loc2.start]: # <<<<<<<<<<<<<< @@ -41946,7 +41941,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py __pyx_t_3 = (((__pyx_v_loc1->arr[__pyx_v_loc1->start]) + 1) < (__pyx_v_loc2->arr[__pyx_v_loc2->start])); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":680 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":681 * return 1 * if loc1.arr[loc1.start]+1 < loc2.arr[loc2.start]: * return -1 # <<<<<<<<<<<<<< @@ -41959,7 +41954,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py } __pyx_L12:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":682 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":683 * return -1 * * for i from 1 <= i < loc1.size: # <<<<<<<<<<<<<< @@ -41969,7 +41964,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py __pyx_t_4 = __pyx_v_loc1->size; for (__pyx_v_i = 1; __pyx_v_i < __pyx_t_4; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":683 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":684 * * for i from 1 <= i < loc1.size: * if loc1.arr[loc1.start+i] > loc2.arr[loc2.start+i]: # <<<<<<<<<<<<<< @@ -41979,7 +41974,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py __pyx_t_3 = ((__pyx_v_loc1->arr[(__pyx_v_loc1->start + __pyx_v_i)]) > (__pyx_v_loc2->arr[(__pyx_v_loc2->start + __pyx_v_i)])); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":684 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":685 * for i from 1 <= i < loc1.size: * if loc1.arr[loc1.start+i] > loc2.arr[loc2.start+i]: * return 1 # <<<<<<<<<<<<<< @@ -41992,7 +41987,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py } __pyx_L15:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":685 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":686 * if loc1.arr[loc1.start+i] > loc2.arr[loc2.start+i]: * return 1 * if loc1.arr[loc1.start+i] < loc2.arr[loc2.start+i]: # <<<<<<<<<<<<<< @@ -42002,7 +41997,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py __pyx_t_3 = ((__pyx_v_loc1->arr[(__pyx_v_loc1->start + __pyx_v_i)]) < (__pyx_v_loc2->arr[(__pyx_v_loc2->start + __pyx_v_i)])); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":686 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":687 * return 1 * if loc1.arr[loc1.start+i] < loc2.arr[loc2.start+i]: * return -1 # <<<<<<<<<<<<<< @@ -42018,7 +42013,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":688 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":689 * return -1 * * if loc2.arr[loc2.end-1] + len_last - loc1.arr[loc1.start] > self.train_max_initial_size: # <<<<<<<<<<<<<< @@ -42028,7 +42023,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py __pyx_t_3 = ((((__pyx_v_loc2->arr[(__pyx_v_loc2->end - 1)]) + __pyx_v_len_last) - (__pyx_v_loc1->arr[__pyx_v_loc1->start])) > __pyx_v_self->train_max_initial_size); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":689 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":690 * * if loc2.arr[loc2.end-1] + len_last - loc1.arr[loc1.start] > self.train_max_initial_size: * return -1 # <<<<<<<<<<<<<< @@ -42041,7 +42036,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py } __pyx_L17:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":690 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":691 * if loc2.arr[loc2.end-1] + len_last - loc1.arr[loc1.start] > self.train_max_initial_size: * return -1 * return 0 # <<<<<<<<<<<<<< @@ -42057,7 +42052,7 @@ static long __pyx_f_3_sa_23HieroCachingRuleFactory_compare_matchings(struct __py return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":693 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":694 * * * cdef int* merge_helper(self, int low1, int high1, int* arr1, int step1, # <<<<<<<<<<<<<< @@ -42081,7 +42076,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj int __pyx_t_3; __Pyx_RefNannySetupContext("merge_helper", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":701 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":702 * cdef Matching loc1, loc2 * * result_len[0] = 0 # <<<<<<<<<<<<<< @@ -42090,7 +42085,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj */ (__pyx_v_result_len[0]) = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":702 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":703 * * result_len[0] = 0 * result = <int*> malloc(0*sizeof(int)) # <<<<<<<<<<<<<< @@ -42099,7 +42094,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj */ __pyx_v_result = ((int *)malloc((0 * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":704 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":705 * result = <int*> malloc(0*sizeof(int)) * * i1 = low1 # <<<<<<<<<<<<<< @@ -42108,7 +42103,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj */ __pyx_v_i1 = __pyx_v_low1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":705 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":706 * * i1 = low1 * i2 = low2 # <<<<<<<<<<<<<< @@ -42117,7 +42112,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj */ __pyx_v_i2 = __pyx_v_low2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":706 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":707 * i1 = low1 * i2 = low2 * while i1 < high1 and i2 < high2: # <<<<<<<<<<<<<< @@ -42134,7 +42129,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj } if (!__pyx_t_3) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":709 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":710 * * # First, pop all unneeded loc2's off the stack * assign_matching(&loc1, arr1, i1, step1, self.fda.sent_id.arr) # <<<<<<<<<<<<<< @@ -42143,7 +42138,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj */ __pyx_f_3_sa_assign_matching((&__pyx_v_loc1), __pyx_v_arr1, __pyx_v_i1, __pyx_v_step1, __pyx_v_self->fda->sent_id->arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":710 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":711 * # First, pop all unneeded loc2's off the stack * assign_matching(&loc1, arr1, i1, step1, self.fda.sent_id.arr) * while i2 < high2: # <<<<<<<<<<<<<< @@ -42154,7 +42149,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj __pyx_t_3 = (__pyx_v_i2 < __pyx_v_high2); if (!__pyx_t_3) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":711 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":712 * assign_matching(&loc1, arr1, i1, step1, self.fda.sent_id.arr) * while i2 < high2: * assign_matching(&loc2, arr2, i2, step2, self.fda.sent_id.arr) # <<<<<<<<<<<<<< @@ -42163,7 +42158,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj */ __pyx_f_3_sa_assign_matching((&__pyx_v_loc2), __pyx_v_arr2, __pyx_v_i2, __pyx_v_step2, __pyx_v_self->fda->sent_id->arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":712 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":713 * while i2 < high2: * assign_matching(&loc2, arr2, i2, step2, self.fda.sent_id.arr) * if self.compare_matchings(&loc1, &loc2, offset_by_one, len_last) == 1: # <<<<<<<<<<<<<< @@ -42173,7 +42168,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj __pyx_t_3 = (((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->compare_matchings(__pyx_v_self, (&__pyx_v_loc1), (&__pyx_v_loc2), __pyx_v_offset_by_one, __pyx_v_len_last) == 1); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":713 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":714 * assign_matching(&loc2, arr2, i2, step2, self.fda.sent_id.arr) * if self.compare_matchings(&loc1, &loc2, offset_by_one, len_last) == 1: * i2 = i2 + step2 # <<<<<<<<<<<<<< @@ -42185,7 +42180,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":715 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":716 * i2 = i2 + step2 * else: * break # <<<<<<<<<<<<<< @@ -42198,7 +42193,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj } __pyx_L6_break:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":718 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":719 * * # Next: process all loc1's with the same starting val * j1 = i1 # <<<<<<<<<<<<<< @@ -42207,7 +42202,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj */ __pyx_v_j1 = __pyx_v_i1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":719 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":720 * # Next: process all loc1's with the same starting val * j1 = i1 * while i1 < high1 and arr1[j1] == arr1[i1]: # <<<<<<<<<<<<<< @@ -42224,7 +42219,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj } if (!__pyx_t_2) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":720 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":721 * j1 = i1 * while i1 < high1 and arr1[j1] == arr1[i1]: * assign_matching(&loc1, arr1, i1, step1, self.fda.sent_id.arr) # <<<<<<<<<<<<<< @@ -42233,7 +42228,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj */ __pyx_f_3_sa_assign_matching((&__pyx_v_loc1), __pyx_v_arr1, __pyx_v_i1, __pyx_v_step1, __pyx_v_self->fda->sent_id->arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":721 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":722 * while i1 < high1 and arr1[j1] == arr1[i1]: * assign_matching(&loc1, arr1, i1, step1, self.fda.sent_id.arr) * j2 = i2 # <<<<<<<<<<<<<< @@ -42242,7 +42237,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj */ __pyx_v_j2 = __pyx_v_i2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":722 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":723 * assign_matching(&loc1, arr1, i1, step1, self.fda.sent_id.arr) * j2 = i2 * while j2 < high2: # <<<<<<<<<<<<<< @@ -42253,7 +42248,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj __pyx_t_2 = (__pyx_v_j2 < __pyx_v_high2); if (!__pyx_t_2) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":723 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":724 * j2 = i2 * while j2 < high2: * assign_matching(&loc2, arr2, j2, step2, self.fda.sent_id.arr) # <<<<<<<<<<<<<< @@ -42262,7 +42257,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj */ __pyx_f_3_sa_assign_matching((&__pyx_v_loc2), __pyx_v_arr2, __pyx_v_j2, __pyx_v_step2, __pyx_v_self->fda->sent_id->arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":724 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":725 * while j2 < high2: * assign_matching(&loc2, arr2, j2, step2, self.fda.sent_id.arr) * comparison = self.compare_matchings(&loc1, &loc2, offset_by_one, len_last) # <<<<<<<<<<<<<< @@ -42271,7 +42266,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj */ __pyx_v_comparison = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->compare_matchings(__pyx_v_self, (&__pyx_v_loc1), (&__pyx_v_loc2), __pyx_v_offset_by_one, __pyx_v_len_last); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":725 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":726 * assign_matching(&loc2, arr2, j2, step2, self.fda.sent_id.arr) * comparison = self.compare_matchings(&loc1, &loc2, offset_by_one, len_last) * if comparison == 0: # <<<<<<<<<<<<<< @@ -42281,7 +42276,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj __pyx_t_2 = (__pyx_v_comparison == 0); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":726 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":727 * comparison = self.compare_matchings(&loc1, &loc2, offset_by_one, len_last) * if comparison == 0: * result = append_combined_matching(result, &loc1, &loc2, offset_by_one, num_subpatterns, result_len) # <<<<<<<<<<<<<< @@ -42293,7 +42288,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj } __pyx_L12:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":727 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":728 * if comparison == 0: * result = append_combined_matching(result, &loc1, &loc2, offset_by_one, num_subpatterns, result_len) * if comparison == 1: # <<<<<<<<<<<<<< @@ -42306,7 +42301,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj } __pyx_L13:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":729 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":730 * if comparison == 1: * pass * if comparison == -1: # <<<<<<<<<<<<<< @@ -42316,7 +42311,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj __pyx_t_2 = (__pyx_v_comparison == -1); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":730 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":731 * pass * if comparison == -1: * break # <<<<<<<<<<<<<< @@ -42328,7 +42323,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":732 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":733 * break * else: * j2 = j2 + step2 # <<<<<<<<<<<<<< @@ -42341,7 +42336,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj } __pyx_L11_break:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":733 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":734 * else: * j2 = j2 + step2 * i1 = i1 + step1 # <<<<<<<<<<<<<< @@ -42352,7 +42347,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj } } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":734 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":735 * j2 = j2 + step2 * i1 = i1 + step1 * return result # <<<<<<<<<<<<<< @@ -42368,7 +42363,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_merge_helper(struct __pyx_obj return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":737 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":738 * * * cdef void sort_phrase_loc(self, IntList arr, PhraseLocation loc, Phrase phrase): # <<<<<<<<<<<<<< @@ -42390,26 +42385,26 @@ static void __pyx_f_3_sa_23HieroCachingRuleFactory_sort_phrase_loc(struct __pyx_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("sort_phrase_loc", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":742 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":743 * cdef IntList result * * if phrase in self.precomputed_index: # <<<<<<<<<<<<<< * loc.arr = self.precomputed_index[phrase] * else: */ - __pyx_t_1 = (__Pyx_PySequence_Contains(((PyObject *)__pyx_v_phrase), __pyx_v_self->precomputed_index, Py_EQ)); if (unlikely(__pyx_t_1 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 742; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = (__Pyx_PySequence_Contains(((PyObject *)__pyx_v_phrase), __pyx_v_self->precomputed_index, Py_EQ)); if (unlikely(__pyx_t_1 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 743; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_1) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":743 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":744 * * if phrase in self.precomputed_index: * loc.arr = self.precomputed_index[phrase] # <<<<<<<<<<<<<< * else: * loc.arr = IntList(initial_len=loc.sa_high-loc.sa_low) */ - __pyx_t_2 = PyObject_GetItem(__pyx_v_self->precomputed_index, ((PyObject *)__pyx_v_phrase)); if (!__pyx_t_2) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 743; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_GetItem(__pyx_v_self->precomputed_index, ((PyObject *)__pyx_v_phrase)); if (!__pyx_t_2) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 744; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - if (!(likely(((__pyx_t_2) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_2, __pyx_ptype_3_sa_IntList))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 743; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_2) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_2, __pyx_ptype_3_sa_IntList))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 744; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GIVEREF(__pyx_t_2); __Pyx_GOTREF(__pyx_v_loc->arr); __Pyx_DECREF(((PyObject *)__pyx_v_loc->arr)); @@ -42419,20 +42414,20 @@ static void __pyx_f_3_sa_23HieroCachingRuleFactory_sort_phrase_loc(struct __pyx_ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":745 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":746 * loc.arr = self.precomputed_index[phrase] * else: * loc.arr = IntList(initial_len=loc.sa_high-loc.sa_low) # <<<<<<<<<<<<<< * veb = VEB(arr.len) * for i from loc.sa_low <= i < loc.sa_high: */ - __pyx_t_2 = PyDict_New(); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 745; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyDict_New(); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 746; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_2)); - __pyx_t_3 = PyInt_FromLong((__pyx_v_loc->sa_high - __pyx_v_loc->sa_low)); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 745; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyInt_FromLong((__pyx_v_loc->sa_high - __pyx_v_loc->sa_low)); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 746; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - if (PyDict_SetItem(__pyx_t_2, ((PyObject *)__pyx_n_s__initial_len), __pyx_t_3) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 745; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_2, ((PyObject *)__pyx_n_s__initial_len), __pyx_t_3) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 746; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - __pyx_t_3 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_IntList)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_2)); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 745; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_IntList)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_2)); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 746; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; __Pyx_GIVEREF(__pyx_t_3); @@ -42441,27 +42436,27 @@ static void __pyx_f_3_sa_23HieroCachingRuleFactory_sort_phrase_loc(struct __pyx_ __pyx_v_loc->arr = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":746 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":747 * else: * loc.arr = IntList(initial_len=loc.sa_high-loc.sa_low) * veb = VEB(arr.len) # <<<<<<<<<<<<<< * for i from loc.sa_low <= i < loc.sa_high: * veb._insert(arr.arr[i]) */ - __pyx_t_3 = PyInt_FromLong(__pyx_v_arr->len); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 746; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyInt_FromLong(__pyx_v_arr->len); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 747; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __pyx_t_2 = PyTuple_New(1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 746; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyTuple_New(1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 747; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); PyTuple_SET_ITEM(__pyx_t_2, 0, __pyx_t_3); __Pyx_GIVEREF(__pyx_t_3); __pyx_t_3 = 0; - __pyx_t_3 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_VEB)), ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 746; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_VEB)), ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 747; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; __pyx_v_veb = ((struct __pyx_obj_3_sa_VEB *)__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":747 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":748 * loc.arr = IntList(initial_len=loc.sa_high-loc.sa_low) * veb = VEB(arr.len) * for i from loc.sa_low <= i < loc.sa_high: # <<<<<<<<<<<<<< @@ -42471,7 +42466,7 @@ static void __pyx_f_3_sa_23HieroCachingRuleFactory_sort_phrase_loc(struct __pyx_ __pyx_t_4 = __pyx_v_loc->sa_high; for (__pyx_v_i = __pyx_v_loc->sa_low; __pyx_v_i < __pyx_t_4; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":748 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":749 * veb = VEB(arr.len) * for i from loc.sa_low <= i < loc.sa_high: * veb._insert(arr.arr[i]) # <<<<<<<<<<<<<< @@ -42481,7 +42476,7 @@ static void __pyx_f_3_sa_23HieroCachingRuleFactory_sort_phrase_loc(struct __pyx_ ((struct __pyx_vtabstruct_3_sa_VEB *)__pyx_v_veb->__pyx_vtab)->_insert(__pyx_v_veb, (__pyx_v_arr->arr[__pyx_v_i])); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":749 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":750 * for i from loc.sa_low <= i < loc.sa_high: * veb._insert(arr.arr[i]) * i = veb.veb.min_val # <<<<<<<<<<<<<< @@ -42490,7 +42485,7 @@ static void __pyx_f_3_sa_23HieroCachingRuleFactory_sort_phrase_loc(struct __pyx_ */ __pyx_v_i = __pyx_v_veb->veb->min_val; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":750 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":751 * veb._insert(arr.arr[i]) * i = veb.veb.min_val * for j from 0 <= j < loc.sa_high-loc.sa_low: # <<<<<<<<<<<<<< @@ -42500,7 +42495,7 @@ static void __pyx_f_3_sa_23HieroCachingRuleFactory_sort_phrase_loc(struct __pyx_ __pyx_t_4 = (__pyx_v_loc->sa_high - __pyx_v_loc->sa_low); for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_4; __pyx_v_j++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":751 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":752 * i = veb.veb.min_val * for j from 0 <= j < loc.sa_high-loc.sa_low: * loc.arr.arr[j] = i # <<<<<<<<<<<<<< @@ -42509,7 +42504,7 @@ static void __pyx_f_3_sa_23HieroCachingRuleFactory_sort_phrase_loc(struct __pyx_ */ (__pyx_v_loc->arr->arr[__pyx_v_j]) = __pyx_v_i; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":752 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":753 * for j from 0 <= j < loc.sa_high-loc.sa_low: * loc.arr.arr[j] = i * i = veb._findsucc(i) # <<<<<<<<<<<<<< @@ -42521,7 +42516,7 @@ static void __pyx_f_3_sa_23HieroCachingRuleFactory_sort_phrase_loc(struct __pyx_ } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":753 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":754 * loc.arr.arr[j] = i * i = veb._findsucc(i) * loc.arr_low = 0 # <<<<<<<<<<<<<< @@ -42530,7 +42525,7 @@ static void __pyx_f_3_sa_23HieroCachingRuleFactory_sort_phrase_loc(struct __pyx_ */ __pyx_v_loc->arr_low = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":754 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":755 * i = veb._findsucc(i) * loc.arr_low = 0 * loc.arr_high = loc.arr.len # <<<<<<<<<<<<<< @@ -42549,7 +42544,7 @@ static void __pyx_f_3_sa_23HieroCachingRuleFactory_sort_phrase_loc(struct __pyx_ __Pyx_RefNannyFinishContext(); 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if (!__pyx_t_1) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 766; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_GetItemInt(((PyObject *)__pyx_v_suffix), 0, sizeof(long), PyInt_FromLong); if (!__pyx_t_1) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 767; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_2 = __Pyx_PyInt_AsInt(__pyx_t_1); if (unlikely((__pyx_t_2 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 766; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = __Pyx_PyInt_AsInt(__pyx_t_1); if (unlikely((__pyx_t_2 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 767; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_t_3 = __pyx_f_3_sa_sym_isvar(__pyx_t_2); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":767 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":768 * * if sym_isvar(suffix[0]): * offset_by_one = 1 # <<<<<<<<<<<<<< @@ -42621,7 +42616,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":769 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":770 * offset_by_one = 1 * else: * offset_by_one = 0 # <<<<<<<<<<<<<< @@ -42632,34 +42627,34 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct } __pyx_L3:; 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__pyx_lineno = 772; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_5 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 771; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 772; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - __pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 771; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 772; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_t_5); __Pyx_GIVEREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_5 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_t_4), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 771; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_t_4), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 772; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0; - __pyx_t_6 = PyObject_Length(__pyx_t_5); if (unlikely(__pyx_t_6 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 771; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyObject_Length(__pyx_t_5); if (unlikely(__pyx_t_6 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 772; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; __pyx_v_len_last = __pyx_t_6; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":773 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":774 * len_last = len(suffix.getchunk(suffix.arity())) * * if prefix_loc.arr is None: # <<<<<<<<<<<<<< @@ -42669,7 +42664,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct __pyx_t_7 = (((PyObject *)__pyx_v_prefix_loc->arr) == Py_None); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":774 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":775 * * if prefix_loc.arr is None: * self.sort_phrase_loc(self.fsa.sa, prefix_loc, prefix) # <<<<<<<<<<<<<< @@ -42684,7 +42679,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":775 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":776 * if prefix_loc.arr is None: * self.sort_phrase_loc(self.fsa.sa, prefix_loc, prefix) * arr1 = prefix_loc.arr # <<<<<<<<<<<<<< @@ -42694,7 +42689,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct __Pyx_INCREF(((PyObject *)__pyx_v_prefix_loc->arr)); __pyx_v_arr1 = __pyx_v_prefix_loc->arr; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":776 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":777 * self.sort_phrase_loc(self.fsa.sa, prefix_loc, prefix) * arr1 = prefix_loc.arr * low1 = prefix_loc.arr_low # <<<<<<<<<<<<<< @@ -42703,7 +42698,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct */ __pyx_v_low1 = __pyx_v_prefix_loc->arr_low; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":777 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":778 * arr1 = prefix_loc.arr * low1 = prefix_loc.arr_low * high1 = prefix_loc.arr_high # <<<<<<<<<<<<<< @@ -42712,7 +42707,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct */ __pyx_v_high1 = __pyx_v_prefix_loc->arr_high; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":778 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":779 * low1 = prefix_loc.arr_low * high1 = prefix_loc.arr_high * step1 = prefix_loc.num_subpatterns # <<<<<<<<<<<<<< @@ -42721,7 +42716,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct */ __pyx_v_step1 = __pyx_v_prefix_loc->num_subpatterns; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":780 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":781 * step1 = prefix_loc.num_subpatterns * * if suffix_loc.arr is None: # <<<<<<<<<<<<<< @@ -42731,7 +42726,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct __pyx_t_7 = (((PyObject *)__pyx_v_suffix_loc->arr) == Py_None); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":781 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":782 * * if suffix_loc.arr is None: * self.sort_phrase_loc(self.fsa.sa, suffix_loc, suffix) # <<<<<<<<<<<<<< @@ -42746,7 +42741,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct } __pyx_L5:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":782 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":783 * if suffix_loc.arr is None: * self.sort_phrase_loc(self.fsa.sa, suffix_loc, suffix) * arr2 = suffix_loc.arr # <<<<<<<<<<<<<< @@ -42756,7 +42751,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct __Pyx_INCREF(((PyObject *)__pyx_v_suffix_loc->arr)); __pyx_v_arr2 = __pyx_v_suffix_loc->arr; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":783 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":784 * self.sort_phrase_loc(self.fsa.sa, suffix_loc, suffix) * arr2 = suffix_loc.arr * low2 = suffix_loc.arr_low # <<<<<<<<<<<<<< @@ -42765,7 +42760,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct */ __pyx_v_low2 = __pyx_v_suffix_loc->arr_low; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":784 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":785 * arr2 = suffix_loc.arr * low2 = suffix_loc.arr_low * high2 = suffix_loc.arr_high # <<<<<<<<<<<<<< @@ -42774,7 +42769,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct */ __pyx_v_high2 = __pyx_v_suffix_loc->arr_high; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":785 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":786 * low2 = suffix_loc.arr_low * high2 = suffix_loc.arr_high * step2 = suffix_loc.num_subpatterns # <<<<<<<<<<<<<< @@ -42783,26 +42778,26 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct */ __pyx_v_step2 = __pyx_v_suffix_loc->num_subpatterns; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":787 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":788 * step2 = suffix_loc.num_subpatterns * * num_subpatterns = prefix.arity()+1 # <<<<<<<<<<<<<< * * if algorithm == MERGE: */ - __pyx_t_5 = PyObject_GetAttr(((PyObject *)__pyx_v_prefix), __pyx_n_s__arity); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 787; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_GetAttr(((PyObject *)__pyx_v_prefix), __pyx_n_s__arity); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 788; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __pyx_t_4 = PyObject_Call(__pyx_t_5, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 787; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_Call(__pyx_t_5, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 788; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_5 = PyNumber_Add(__pyx_t_4, __pyx_int_1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 787; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyNumber_Add(__pyx_t_4, __pyx_int_1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 788; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - __pyx_t_3 = __Pyx_PyInt_AsInt(__pyx_t_5); if (unlikely((__pyx_t_3 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 787; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __Pyx_PyInt_AsInt(__pyx_t_5); if (unlikely((__pyx_t_3 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 788; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; __pyx_v_num_subpatterns = __pyx_t_3; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":789 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":790 * num_subpatterns = prefix.arity()+1 * * if algorithm == MERGE: # <<<<<<<<<<<<<< @@ -42812,7 +42807,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct __pyx_t_7 = (__pyx_v_algorithm == __pyx_v_3_sa_MERGE); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":792 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":793 * result_ptr = self.merge_helper(low1, high1, arr1.arr, step1, * low2, high2, arr2.arr, step2, * offset_by_one, len_last, num_subpatterns, &result_len) # <<<<<<<<<<<<<< @@ -42824,7 +42819,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":796 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":797 * result_ptr = self.baeza_yates_helper(low1, high1, arr1.arr, step1, * low2, high2, arr2.arr, step2, * offset_by_one, len_last, num_subpatterns, &result_len) # <<<<<<<<<<<<<< @@ -42835,7 +42830,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct } __pyx_L6:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":798 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":799 * offset_by_one, len_last, num_subpatterns, &result_len) * * if result_len == 0: # <<<<<<<<<<<<<< @@ -42845,7 +42840,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct __pyx_t_7 = (__pyx_v_result_len == 0); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":799 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":800 * * if result_len == 0: * free(result_ptr) # <<<<<<<<<<<<<< @@ -42854,7 +42849,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct */ free(__pyx_v_result_ptr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":800 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":801 * if result_len == 0: * free(result_ptr) * return None # <<<<<<<<<<<<<< @@ -42869,19 +42864,19 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":802 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":803 * return None * else: * result = IntList() # <<<<<<<<<<<<<< * free(result.arr) * result.arr = result_ptr */ - __pyx_t_5 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_IntList)), ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 802; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_IntList)), ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 803; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __pyx_v_result = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_5); __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":803 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":804 * else: * result = IntList() * free(result.arr) # <<<<<<<<<<<<<< @@ -42890,7 +42885,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct */ free(__pyx_v_result->arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":804 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":805 * result = IntList() * free(result.arr) * result.arr = result_ptr # <<<<<<<<<<<<<< @@ -42899,7 +42894,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct */ __pyx_v_result->arr = __pyx_v_result_ptr; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":805 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":806 * free(result.arr) * result.arr = result_ptr * result.len = result_len # <<<<<<<<<<<<<< @@ -42908,7 +42903,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct */ __pyx_v_result->len = __pyx_v_result_len; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":806 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":807 * result.arr = result_ptr * result.len = result_len * result.size = result_len # <<<<<<<<<<<<<< @@ -42917,7 +42912,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct */ __pyx_v_result->size = __pyx_v_result_len; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":807 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":808 * result.len = result_len * result.size = result_len * return PhraseLocation(arr_low=0, arr_high=result_len, arr=result, num_subpatterns=num_subpatterns) # <<<<<<<<<<<<<< @@ -42925,19 +42920,19 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct * cdef loc2str(self, PhraseLocation loc): */ __Pyx_XDECREF(__pyx_r); - __pyx_t_5 = PyDict_New(); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 807; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyDict_New(); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 808; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_5)); - if (PyDict_SetItem(__pyx_t_5, ((PyObject *)__pyx_n_s__arr_low), __pyx_int_0) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 807; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_4 = PyInt_FromLong(__pyx_v_result_len); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 807; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_5, ((PyObject *)__pyx_n_s__arr_low), __pyx_int_0) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 808; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyInt_FromLong(__pyx_v_result_len); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 808; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - if (PyDict_SetItem(__pyx_t_5, ((PyObject *)__pyx_n_s__arr_high), __pyx_t_4) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 807; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_5, ((PyObject *)__pyx_n_s__arr_high), __pyx_t_4) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 808; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - if (PyDict_SetItem(__pyx_t_5, ((PyObject *)__pyx_n_s__arr), ((PyObject *)__pyx_v_result)) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 807; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_4 = PyInt_FromLong(__pyx_v_num_subpatterns); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 807; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_5, ((PyObject *)__pyx_n_s__arr), ((PyObject *)__pyx_v_result)) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 808; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyInt_FromLong(__pyx_v_num_subpatterns); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 808; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - if (PyDict_SetItem(__pyx_t_5, ((PyObject *)__pyx_n_s__num_subpatterns), __pyx_t_4) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 807; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_5, ((PyObject *)__pyx_n_s__num_subpatterns), __pyx_t_4) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 808; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - __pyx_t_4 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_PhraseLocation)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_5)); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 807; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_PhraseLocation)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_5)); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 808; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(((PyObject *)__pyx_t_5)); __pyx_t_5 = 0; __pyx_r = __pyx_t_4; @@ -42963,7 +42958,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_intersect_helper(struct return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":809 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":810 * return PhraseLocation(arr_low=0, arr_high=result_len, arr=result, num_subpatterns=num_subpatterns) * * cdef loc2str(self, PhraseLocation loc): # <<<<<<<<<<<<<< @@ -42986,7 +42981,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_loc2str(CYTHON_UNUSED st int __pyx_clineno = 0; __Pyx_RefNannySetupContext("loc2str", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":811 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":812 * cdef loc2str(self, PhraseLocation loc): * cdef int i, j * result = "{" # <<<<<<<<<<<<<< @@ -42996,7 +42991,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_loc2str(CYTHON_UNUSED st __Pyx_INCREF(((PyObject *)__pyx_kp_s_116)); __pyx_v_result = ((PyObject *)__pyx_kp_s_116); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":812 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":813 * cdef int i, j * result = "{" * i = 0 # <<<<<<<<<<<<<< @@ -43005,7 +43000,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_loc2str(CYTHON_UNUSED st */ __pyx_v_i = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":813 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":814 * result = "{" * i = 0 * while i < loc.arr_high: # <<<<<<<<<<<<<< @@ -43016,20 +43011,20 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_loc2str(CYTHON_UNUSED st __pyx_t_1 = (__pyx_v_i < __pyx_v_loc->arr_high); if (!__pyx_t_1) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":814 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":815 * i = 0 * while i < loc.arr_high: * result = result + "(" # <<<<<<<<<<<<<< * for j from i <= j < i + loc.num_subpatterns: * result = result + ("%d " %loc.arr[j]) */ - __pyx_t_2 = PyNumber_Add(__pyx_v_result, ((PyObject *)__pyx_kp_s_117)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 814; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyNumber_Add(__pyx_v_result, ((PyObject *)__pyx_kp_s_117)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 815; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_v_result); __pyx_v_result = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":815 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":816 * while i < loc.arr_high: * result = result + "(" * for j from i <= j < i + loc.num_subpatterns: # <<<<<<<<<<<<<< @@ -43039,19 +43034,19 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_loc2str(CYTHON_UNUSED st __pyx_t_3 = (__pyx_v_i + __pyx_v_loc->num_subpatterns); for (__pyx_v_j = __pyx_v_i; __pyx_v_j < __pyx_t_3; __pyx_v_j++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":816 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":817 * result = result + "(" * for j from i <= j < i + loc.num_subpatterns: * result = result + ("%d " %loc.arr[j]) # <<<<<<<<<<<<<< * result = result + ")" * i = i + loc.num_subpatterns */ - __pyx_t_2 = __Pyx_GetItemInt(((PyObject *)__pyx_v_loc->arr), __pyx_v_j, sizeof(int), PyInt_FromLong); if (!__pyx_t_2) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 816; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = __Pyx_GetItemInt(((PyObject *)__pyx_v_loc->arr), __pyx_v_j, sizeof(int), PyInt_FromLong); if (!__pyx_t_2) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 817; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_4 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_21), __pyx_t_2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 816; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_21), __pyx_t_2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 817; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_4)); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - __pyx_t_2 = PyNumber_Add(__pyx_v_result, ((PyObject *)__pyx_t_4)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 816; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyNumber_Add(__pyx_v_result, ((PyObject *)__pyx_t_4)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 817; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0; __Pyx_DECREF(__pyx_v_result); @@ -43059,20 +43054,20 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_loc2str(CYTHON_UNUSED st __pyx_t_2 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":817 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":818 * for j from i <= j < i + loc.num_subpatterns: * result = result + ("%d " %loc.arr[j]) * result = result + ")" # <<<<<<<<<<<<<< * i = i + loc.num_subpatterns * result = result + "}" */ - __pyx_t_2 = PyNumber_Add(__pyx_v_result, ((PyObject *)__pyx_kp_s_59)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 817; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyNumber_Add(__pyx_v_result, ((PyObject *)__pyx_kp_s_59)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 818; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_v_result); __pyx_v_result = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":818 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":819 * result = result + ("%d " %loc.arr[j]) * result = result + ")" * i = i + loc.num_subpatterns # <<<<<<<<<<<<<< @@ -43082,20 +43077,20 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_loc2str(CYTHON_UNUSED st __pyx_v_i = (__pyx_v_i + __pyx_v_loc->num_subpatterns); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":819 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":820 * result = result + ")" * i = i + loc.num_subpatterns * result = result + "}" # <<<<<<<<<<<<<< * return result * */ - __pyx_t_2 = PyNumber_Add(__pyx_v_result, ((PyObject *)__pyx_kp_s_118)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 819; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyNumber_Add(__pyx_v_result, ((PyObject *)__pyx_kp_s_118)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 820; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_v_result); __pyx_v_result = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":820 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":821 * i = i + loc.num_subpatterns * result = result + "}" * return result # <<<<<<<<<<<<<< @@ -43121,7 +43116,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_loc2str(CYTHON_UNUSED st return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":822 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":823 * return result * * cdef PhraseLocation intersect(self, prefix_node, suffix_node, Phrase phrase): # <<<<<<<<<<<<<< @@ -43147,81 +43142,81 @@ static struct __pyx_obj_3_sa_PhraseLocation *__pyx_f_3_sa_23HieroCachingRuleFact int __pyx_clineno = 0; __Pyx_RefNannySetupContext("intersect", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":826 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":827 * cdef PhraseLocation prefix_loc, suffix_loc, result * * prefix = prefix_node.phrase # <<<<<<<<<<<<<< * suffix = suffix_node.phrase * prefix_loc = prefix_node.phrase_location */ - __pyx_t_1 = PyObject_GetAttr(__pyx_v_prefix_node, __pyx_n_s__phrase); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 826; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetAttr(__pyx_v_prefix_node, __pyx_n_s__phrase); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 827; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_3_sa_Phrase))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 826; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_3_sa_Phrase))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 827; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_prefix = ((struct __pyx_obj_3_sa_Phrase *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":827 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":828 * * prefix = prefix_node.phrase * suffix = suffix_node.phrase # <<<<<<<<<<<<<< * prefix_loc = prefix_node.phrase_location * suffix_loc = suffix_node.phrase_location */ - __pyx_t_1 = PyObject_GetAttr(__pyx_v_suffix_node, __pyx_n_s__phrase); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 827; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetAttr(__pyx_v_suffix_node, __pyx_n_s__phrase); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 828; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_3_sa_Phrase))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 827; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_3_sa_Phrase))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 828; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_suffix = ((struct __pyx_obj_3_sa_Phrase *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":828 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":829 * prefix = prefix_node.phrase * suffix = suffix_node.phrase * prefix_loc = prefix_node.phrase_location # <<<<<<<<<<<<<< * suffix_loc = suffix_node.phrase_location * */ - __pyx_t_1 = PyObject_GetAttr(__pyx_v_prefix_node, __pyx_n_s__phrase_location); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 828; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetAttr(__pyx_v_prefix_node, __pyx_n_s__phrase_location); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 829; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_3_sa_PhraseLocation))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 828; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_3_sa_PhraseLocation))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 829; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_prefix_loc = ((struct __pyx_obj_3_sa_PhraseLocation *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":829 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":830 * suffix = suffix_node.phrase * prefix_loc = prefix_node.phrase_location * suffix_loc = suffix_node.phrase_location # <<<<<<<<<<<<<< * * result = self.get_precomputed_collocation(phrase) */ - __pyx_t_1 = PyObject_GetAttr(__pyx_v_suffix_node, __pyx_n_s__phrase_location); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 829; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetAttr(__pyx_v_suffix_node, __pyx_n_s__phrase_location); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 830; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_3_sa_PhraseLocation))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 829; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_3_sa_PhraseLocation))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 830; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_suffix_loc = ((struct __pyx_obj_3_sa_PhraseLocation *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":831 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":832 * suffix_loc = suffix_node.phrase_location * * result = self.get_precomputed_collocation(phrase) # <<<<<<<<<<<<<< * if result is not None: * intersect_method = "precomputed" */ - __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s_119); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 831; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s_119); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 832; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_2 = PyTuple_New(1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 831; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyTuple_New(1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 832; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_INCREF(((PyObject *)__pyx_v_phrase)); PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_v_phrase)); __Pyx_GIVEREF(((PyObject *)__pyx_v_phrase)); - __pyx_t_3 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 831; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 832; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; - if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_ptype_3_sa_PhraseLocation))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 831; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_ptype_3_sa_PhraseLocation))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 832; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_result = ((struct __pyx_obj_3_sa_PhraseLocation *)__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":832 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":833 * * result = self.get_precomputed_collocation(phrase) * if result is not None: # <<<<<<<<<<<<<< @@ -43231,7 +43226,7 @@ static struct __pyx_obj_3_sa_PhraseLocation *__pyx_f_3_sa_23HieroCachingRuleFact __pyx_t_4 = (((PyObject *)__pyx_v_result) != Py_None); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":833 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":834 * result = self.get_precomputed_collocation(phrase) * if result is not None: * intersect_method = "precomputed" # <<<<<<<<<<<<<< @@ -43244,7 +43239,7 @@ static struct __pyx_obj_3_sa_PhraseLocation *__pyx_f_3_sa_23HieroCachingRuleFact } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":835 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":836 * intersect_method = "precomputed" * * if result is None: # <<<<<<<<<<<<<< @@ -43254,7 +43249,7 @@ static struct __pyx_obj_3_sa_PhraseLocation *__pyx_f_3_sa_23HieroCachingRuleFact __pyx_t_4 = (((PyObject *)__pyx_v_result) == Py_None); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":836 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":837 * * if result is None: * if self.use_baeza_yates: # <<<<<<<<<<<<<< @@ -43263,21 +43258,21 @@ static struct __pyx_obj_3_sa_PhraseLocation *__pyx_f_3_sa_23HieroCachingRuleFact */ if (__pyx_v_self->use_baeza_yates) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":837 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":838 * if result is None: * if self.use_baeza_yates: * result = self.intersect_helper(prefix, suffix, prefix_loc, suffix_loc, BAEZA_YATES) # <<<<<<<<<<<<<< * intersect_method="double binary" * else: */ - __pyx_t_3 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->intersect_helper(__pyx_v_self, __pyx_v_prefix, __pyx_v_suffix, __pyx_v_prefix_loc, __pyx_v_suffix_loc, __pyx_v_3_sa_BAEZA_YATES); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 837; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->intersect_helper(__pyx_v_self, __pyx_v_prefix, __pyx_v_suffix, __pyx_v_prefix_loc, __pyx_v_suffix_loc, __pyx_v_3_sa_BAEZA_YATES); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 838; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_ptype_3_sa_PhraseLocation))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 837; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_ptype_3_sa_PhraseLocation))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 838; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(((PyObject *)__pyx_v_result)); __pyx_v_result = ((struct __pyx_obj_3_sa_PhraseLocation *)__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":838 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":839 * if self.use_baeza_yates: * result = self.intersect_helper(prefix, suffix, prefix_loc, suffix_loc, BAEZA_YATES) * intersect_method="double binary" # <<<<<<<<<<<<<< @@ -43291,21 +43286,21 @@ static struct __pyx_obj_3_sa_PhraseLocation *__pyx_f_3_sa_23HieroCachingRuleFact } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":840 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":841 * intersect_method="double binary" * else: * result = self.intersect_helper(prefix, suffix, prefix_loc, suffix_loc, MERGE) # <<<<<<<<<<<<<< * intersect_method="merge" * return result */ - __pyx_t_3 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->intersect_helper(__pyx_v_self, __pyx_v_prefix, __pyx_v_suffix, __pyx_v_prefix_loc, __pyx_v_suffix_loc, __pyx_v_3_sa_MERGE); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 840; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->intersect_helper(__pyx_v_self, __pyx_v_prefix, __pyx_v_suffix, __pyx_v_prefix_loc, __pyx_v_suffix_loc, __pyx_v_3_sa_MERGE); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 841; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_ptype_3_sa_PhraseLocation))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 840; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_ptype_3_sa_PhraseLocation))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 841; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(((PyObject *)__pyx_v_result)); __pyx_v_result = ((struct __pyx_obj_3_sa_PhraseLocation *)__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":841 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":842 * else: * result = self.intersect_helper(prefix, suffix, prefix_loc, suffix_loc, MERGE) * intersect_method="merge" # <<<<<<<<<<<<<< @@ -43321,7 +43316,7 @@ static struct __pyx_obj_3_sa_PhraseLocation *__pyx_f_3_sa_23HieroCachingRuleFact } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":842 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":843 * result = self.intersect_helper(prefix, suffix, prefix_loc, suffix_loc, MERGE) * intersect_method="merge" * return result # <<<<<<<<<<<<<< @@ -43383,16 +43378,16 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_13advance(PyObject *__p case 1: if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__res)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("advance", 1, 3, 3, 1); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 844; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("advance", 1, 3, 3, 1); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 845; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 2: if (likely((values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__fwords)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("advance", 1, 3, 3, 2); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 844; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("advance", 1, 3, 3, 2); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 845; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "advance") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 844; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "advance") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 845; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } else if (PyTuple_GET_SIZE(__pyx_args) != 3) { goto __pyx_L5_argtuple_error; @@ -43407,7 +43402,7 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_13advance(PyObject *__p } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("advance", 1, 3, 3, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 844; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("advance", 1, 3, 3, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 845; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_L3_error:; __Pyx_AddTraceback("_sa.HieroCachingRuleFactory.advance", __pyx_clineno, __pyx_lineno, __pyx_filename); __Pyx_RefNannyFinishContext(); @@ -43418,7 +43413,7 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_13advance(PyObject *__p return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":844 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":845 * return result * * def advance(self, frontier, res, fwords): # <<<<<<<<<<<<<< @@ -43459,19 +43454,19 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("advance", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":846 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":847 * def advance(self, frontier, res, fwords): * cdef unsigned na * nf = [] # <<<<<<<<<<<<<< * for (toskip, (i, alt, pathlen)) in frontier: * spanlen = fwords[i][alt][2] */ - __pyx_t_1 = PyList_New(0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 846; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyList_New(0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_v_nf = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":847 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":848 * cdef unsigned na * nf = [] * for (toskip, (i, alt, pathlen)) in frontier: # <<<<<<<<<<<<<< @@ -43482,7 +43477,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ __pyx_t_1 = __pyx_v_frontier; __Pyx_INCREF(__pyx_t_1); __pyx_t_2 = 0; __pyx_t_3 = NULL; } else { - __pyx_t_2 = -1; __pyx_t_1 = PyObject_GetIter(__pyx_v_frontier); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = -1; __pyx_t_1 = PyObject_GetIter(__pyx_v_frontier); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_t_3 = Py_TYPE(__pyx_t_1)->tp_iternext; } @@ -43490,23 +43485,23 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ if (!__pyx_t_3 && PyList_CheckExact(__pyx_t_1)) { if (__pyx_t_2 >= PyList_GET_SIZE(__pyx_t_1)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_4 = PyList_GET_ITEM(__pyx_t_1, __pyx_t_2); __Pyx_INCREF(__pyx_t_4); __pyx_t_2++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyList_GET_ITEM(__pyx_t_1, __pyx_t_2); __Pyx_INCREF(__pyx_t_4); __pyx_t_2++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_4 = PySequence_ITEM(__pyx_t_1, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PySequence_ITEM(__pyx_t_1, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else if (!__pyx_t_3 && PyTuple_CheckExact(__pyx_t_1)) { if (__pyx_t_2 >= PyTuple_GET_SIZE(__pyx_t_1)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_4 = PyTuple_GET_ITEM(__pyx_t_1, __pyx_t_2); __Pyx_INCREF(__pyx_t_4); __pyx_t_2++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_GET_ITEM(__pyx_t_1, __pyx_t_2); __Pyx_INCREF(__pyx_t_4); __pyx_t_2++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_4 = PySequence_ITEM(__pyx_t_1, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PySequence_ITEM(__pyx_t_1, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else { __pyx_t_4 = __pyx_t_3(__pyx_t_1); if (unlikely(!__pyx_t_4)) { if (PyErr_Occurred()) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } break; } @@ -43522,7 +43517,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ if (unlikely(size != 2)) { if (size > 2) __Pyx_RaiseTooManyValuesError(2); else if (size >= 0) __Pyx_RaiseNeedMoreValuesError(size); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } #if CYTHON_COMPILING_IN_CPYTHON if (likely(PyTuple_CheckExact(sequence))) { @@ -43535,14 +43530,14 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ __Pyx_INCREF(__pyx_t_5); __Pyx_INCREF(__pyx_t_6); #else - __pyx_t_5 = PySequence_ITEM(sequence, 0); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_6 = PySequence_ITEM(sequence, 1); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PySequence_ITEM(sequence, 0); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PySequence_ITEM(sequence, 1); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; } else { Py_ssize_t index = -1; - __pyx_t_7 = PyObject_GetIter(__pyx_t_4); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyObject_GetIter(__pyx_t_4); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __pyx_t_8 = Py_TYPE(__pyx_t_7)->tp_iternext; @@ -43550,7 +43545,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ __Pyx_GOTREF(__pyx_t_5); index = 1; __pyx_t_6 = __pyx_t_8(__pyx_t_7); if (unlikely(!__pyx_t_6)) goto __pyx_L5_unpacking_failed; __Pyx_GOTREF(__pyx_t_6); - if (__Pyx_IternextUnpackEndCheck(__pyx_t_8(__pyx_t_7), 2) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_IternextUnpackEndCheck(__pyx_t_8(__pyx_t_7), 2) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_8 = NULL; __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; goto __pyx_L6_unpacking_done; @@ -43558,7 +43553,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; __pyx_t_8 = NULL; if (__Pyx_IterFinish() == 0) __Pyx_RaiseNeedMoreValuesError(index); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_L6_unpacking_done:; } __Pyx_XDECREF(__pyx_v_toskip); @@ -43574,7 +43569,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ if (unlikely(size != 3)) { if (size > 3) __Pyx_RaiseTooManyValuesError(3); else if (size >= 0) __Pyx_RaiseNeedMoreValuesError(size); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } #if CYTHON_COMPILING_IN_CPYTHON if (likely(PyTuple_CheckExact(sequence))) { @@ -43590,15 +43585,15 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ __Pyx_INCREF(__pyx_t_9); __Pyx_INCREF(__pyx_t_10); #else - __pyx_t_7 = PySequence_ITEM(sequence, 0); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_9 = PySequence_ITEM(sequence, 1); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_10 = PySequence_ITEM(sequence, 2); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PySequence_ITEM(sequence, 0); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PySequence_ITEM(sequence, 1); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PySequence_ITEM(sequence, 2); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; } else { Py_ssize_t index = -1; - __pyx_t_11 = PyObject_GetIter(__pyx_t_6); if (unlikely(!__pyx_t_11)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_11 = PyObject_GetIter(__pyx_t_6); if (unlikely(!__pyx_t_11)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_11); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; __pyx_t_8 = Py_TYPE(__pyx_t_11)->tp_iternext; @@ -43608,7 +43603,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ __Pyx_GOTREF(__pyx_t_9); index = 2; __pyx_t_10 = __pyx_t_8(__pyx_t_11); if (unlikely(!__pyx_t_10)) goto __pyx_L7_unpacking_failed; __Pyx_GOTREF(__pyx_t_10); - if (__Pyx_IternextUnpackEndCheck(__pyx_t_8(__pyx_t_11), 3) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_IternextUnpackEndCheck(__pyx_t_8(__pyx_t_11), 3) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_8 = NULL; __Pyx_DECREF(__pyx_t_11); __pyx_t_11 = 0; goto __pyx_L8_unpacking_done; @@ -43616,7 +43611,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ __Pyx_DECREF(__pyx_t_11); __pyx_t_11 = 0; __pyx_t_8 = NULL; if (__Pyx_IterFinish() == 0) __Pyx_RaiseNeedMoreValuesError(index); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 847; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_L8_unpacking_done:; } __Pyx_XDECREF(__pyx_v_i); @@ -43629,45 +43624,45 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ __pyx_v_pathlen = __pyx_t_10; __pyx_t_10 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":848 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":849 * nf = [] * for (toskip, (i, alt, pathlen)) in frontier: * spanlen = fwords[i][alt][2] # <<<<<<<<<<<<<< * if (toskip == 0): * res.append((i, alt, pathlen)) */ - __pyx_t_4 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_i); if (!__pyx_t_4) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_i); if (!__pyx_t_4) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 849; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_6 = PyObject_GetItem(__pyx_t_4, __pyx_v_alt); if (!__pyx_t_6) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyObject_GetItem(__pyx_t_4, __pyx_v_alt); if (!__pyx_t_6) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 849; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - __pyx_t_4 = __Pyx_GetItemInt(__pyx_t_6, 2, sizeof(long), PyInt_FromLong); if (!__pyx_t_4) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 848; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = __Pyx_GetItemInt(__pyx_t_6, 2, sizeof(long), PyInt_FromLong); if (!__pyx_t_4) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 849; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; __Pyx_XDECREF(__pyx_v_spanlen); __pyx_v_spanlen = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":849 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":850 * for (toskip, (i, alt, pathlen)) in frontier: * spanlen = fwords[i][alt][2] * if (toskip == 0): # <<<<<<<<<<<<<< * res.append((i, alt, pathlen)) * ni = i + spanlen */ - __pyx_t_4 = PyObject_RichCompare(__pyx_v_toskip, __pyx_int_0, Py_EQ); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 849; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_12 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_12 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 849; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_RichCompare(__pyx_v_toskip, __pyx_int_0, Py_EQ); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 850; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_12 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_12 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 850; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; if (__pyx_t_12) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":850 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":851 * spanlen = fwords[i][alt][2] * if (toskip == 0): * res.append((i, alt, pathlen)) # <<<<<<<<<<<<<< * ni = i + spanlen * if (ni < len(fwords) and (pathlen + 1) < self.max_initial_size): */ - __pyx_t_4 = PyTuple_New(3); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 850; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_New(3); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 851; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_INCREF(__pyx_v_i); PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_v_i); @@ -43678,7 +43673,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ __Pyx_INCREF(__pyx_v_pathlen); PyTuple_SET_ITEM(__pyx_t_4, 2, __pyx_v_pathlen); __Pyx_GIVEREF(__pyx_v_pathlen); - __pyx_t_6 = __Pyx_PyObject_Append(__pyx_v_res, ((PyObject *)__pyx_t_4)); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 850; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = __Pyx_PyObject_Append(__pyx_v_res, ((PyObject *)__pyx_t_4)); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 851; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_DECREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0; __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; @@ -43686,42 +43681,42 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ } __pyx_L9:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":851 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":852 * if (toskip == 0): * res.append((i, alt, pathlen)) * ni = i + spanlen # <<<<<<<<<<<<<< * if (ni < len(fwords) and (pathlen + 1) < self.max_initial_size): * for na in range(len(fwords[ni])): */ - __pyx_t_6 = PyNumber_Add(__pyx_v_i, __pyx_v_spanlen); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 851; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyNumber_Add(__pyx_v_i, __pyx_v_spanlen); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 852; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_XDECREF(__pyx_v_ni); __pyx_v_ni = __pyx_t_6; __pyx_t_6 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":852 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":853 * res.append((i, alt, pathlen)) * ni = i + spanlen * if (ni < len(fwords) and (pathlen + 1) < self.max_initial_size): # <<<<<<<<<<<<<< * for na in range(len(fwords[ni])): * nf.append((toskip - 1, (ni, na, pathlen + 1))) */ - __pyx_t_13 = PyObject_Length(__pyx_v_fwords); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 852; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_6 = PyInt_FromSsize_t(__pyx_t_13); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 852; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = PyObject_Length(__pyx_v_fwords); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 853; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyInt_FromSsize_t(__pyx_t_13); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 853; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_4 = PyObject_RichCompare(__pyx_v_ni, __pyx_t_6, Py_LT); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 852; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_RichCompare(__pyx_v_ni, __pyx_t_6, Py_LT); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 853; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - __pyx_t_12 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_12 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 852; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_12 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_12 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 853; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; if (__pyx_t_12) { - __pyx_t_4 = PyNumber_Add(__pyx_v_pathlen, __pyx_int_1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 852; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyNumber_Add(__pyx_v_pathlen, __pyx_int_1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 853; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_6 = PyInt_FromLong(__pyx_v_self->max_initial_size); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 852; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyInt_FromLong(__pyx_v_self->max_initial_size); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 853; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_5 = PyObject_RichCompare(__pyx_t_4, __pyx_t_6, Py_LT); __Pyx_XGOTREF(__pyx_t_5); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 852; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_RichCompare(__pyx_t_4, __pyx_t_6, Py_LT); __Pyx_XGOTREF(__pyx_t_5); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 853; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - __pyx_t_14 = __Pyx_PyObject_IsTrue(__pyx_t_5); if (unlikely(__pyx_t_14 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 852; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = __Pyx_PyObject_IsTrue(__pyx_t_5); if (unlikely(__pyx_t_14 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 853; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; __pyx_t_15 = __pyx_t_14; } else { @@ -43729,34 +43724,34 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ } if (__pyx_t_15) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":853 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":854 * ni = i + spanlen * if (ni < len(fwords) and (pathlen + 1) < self.max_initial_size): * for na in range(len(fwords[ni])): # <<<<<<<<<<<<<< * nf.append((toskip - 1, (ni, na, pathlen + 1))) * if (len(nf) > 0): */ - __pyx_t_5 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_ni); if (!__pyx_t_5) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 853; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_ni); if (!__pyx_t_5) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 854; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __pyx_t_13 = PyObject_Length(__pyx_t_5); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 853; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = PyObject_Length(__pyx_t_5); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 854; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; for (__pyx_t_16 = 0; __pyx_t_16 < __pyx_t_13; __pyx_t_16+=1) { __pyx_v_na = __pyx_t_16; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":854 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":855 * if (ni < len(fwords) and (pathlen + 1) < self.max_initial_size): * for na in range(len(fwords[ni])): * nf.append((toskip - 1, (ni, na, pathlen + 1))) # <<<<<<<<<<<<<< * if (len(nf) > 0): * return self.advance(nf, res, fwords) */ - __pyx_t_5 = PyNumber_Subtract(__pyx_v_toskip, __pyx_int_1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 854; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyNumber_Subtract(__pyx_v_toskip, __pyx_int_1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 855; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __pyx_t_6 = PyLong_FromUnsignedLong(__pyx_v_na); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 854; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyLong_FromUnsignedLong(__pyx_v_na); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 855; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_4 = PyNumber_Add(__pyx_v_pathlen, __pyx_int_1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 854; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyNumber_Add(__pyx_v_pathlen, __pyx_int_1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 855; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_10 = PyTuple_New(3); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 854; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyTuple_New(3); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 855; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); __Pyx_INCREF(__pyx_v_ni); PyTuple_SET_ITEM(__pyx_t_10, 0, __pyx_v_ni); @@ -43767,7 +43762,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ __Pyx_GIVEREF(__pyx_t_4); __pyx_t_6 = 0; __pyx_t_4 = 0; - __pyx_t_4 = PyTuple_New(2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 854; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_New(2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 855; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_t_5); __Pyx_GIVEREF(__pyx_t_5); @@ -43775,7 +43770,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ __Pyx_GIVEREF(((PyObject *)__pyx_t_10)); __pyx_t_5 = 0; __pyx_t_10 = 0; - __pyx_t_17 = PyList_Append(__pyx_v_nf, ((PyObject *)__pyx_t_4)); if (unlikely(__pyx_t_17 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 854; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_17 = PyList_Append(__pyx_v_nf, ((PyObject *)__pyx_t_4)); if (unlikely(__pyx_t_17 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 855; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0; } goto __pyx_L10; @@ -43784,18 +43779,18 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ } __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":855 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":856 * for na in range(len(fwords[ni])): * nf.append((toskip - 1, (ni, na, pathlen + 1))) * if (len(nf) > 0): # <<<<<<<<<<<<<< * return self.advance(nf, res, fwords) * else: */ - __pyx_t_2 = PyList_GET_SIZE(((PyObject *)__pyx_v_nf)); if (unlikely(__pyx_t_2 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 855; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyList_GET_SIZE(((PyObject *)__pyx_v_nf)); if (unlikely(__pyx_t_2 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 856; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_15 = (__pyx_t_2 > 0); if (__pyx_t_15) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":856 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":857 * nf.append((toskip - 1, (ni, na, pathlen + 1))) * if (len(nf) > 0): * return self.advance(nf, res, fwords) # <<<<<<<<<<<<<< @@ -43803,9 +43798,9 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ * return res */ __Pyx_XDECREF(__pyx_r); - __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s__advance); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 856; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s__advance); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 857; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_4 = PyTuple_New(3); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 856; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_New(3); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 857; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_INCREF(((PyObject *)__pyx_v_nf)); PyTuple_SET_ITEM(__pyx_t_4, 0, ((PyObject *)__pyx_v_nf)); @@ -43816,7 +43811,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ __Pyx_INCREF(__pyx_v_fwords); PyTuple_SET_ITEM(__pyx_t_4, 2, __pyx_v_fwords); __Pyx_GIVEREF(__pyx_v_fwords); - __pyx_t_10 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_t_4), NULL); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 856; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_t_4), NULL); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 857; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0; @@ -43827,7 +43822,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_12advance(struct __pyx_ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":858 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":859 * return self.advance(nf, res, fwords) * else: * return res # <<<<<<<<<<<<<< @@ -43905,36 +43900,36 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_15get_all_nodes_isteps_ case 1: if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__i)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("get_all_nodes_isteps_away", 1, 7, 7, 1); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 860; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("get_all_nodes_isteps_away", 1, 7, 7, 1); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 861; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 2: if (likely((values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__spanlen)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("get_all_nodes_isteps_away", 1, 7, 7, 2); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 860; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("get_all_nodes_isteps_away", 1, 7, 7, 2); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 861; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 3: if (likely((values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__pathlen)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("get_all_nodes_isteps_away", 1, 7, 7, 3); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 860; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("get_all_nodes_isteps_away", 1, 7, 7, 3); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 861; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 4: if (likely((values[4] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__fwords)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("get_all_nodes_isteps_away", 1, 7, 7, 4); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 860; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("get_all_nodes_isteps_away", 1, 7, 7, 4); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 861; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 5: if (likely((values[5] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__next_states)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("get_all_nodes_isteps_away", 1, 7, 7, 5); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 860; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("get_all_nodes_isteps_away", 1, 7, 7, 5); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 861; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 6: if (likely((values[6] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__reachable_buffer)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("get_all_nodes_isteps_away", 1, 7, 7, 6); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 860; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("get_all_nodes_isteps_away", 1, 7, 7, 6); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 861; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "get_all_nodes_isteps_away") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 860; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "get_all_nodes_isteps_away") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 861; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } else if (PyTuple_GET_SIZE(__pyx_args) != 7) { goto __pyx_L5_argtuple_error; @@ -43957,7 +43952,7 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_15get_all_nodes_isteps_ } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("get_all_nodes_isteps_away", 1, 7, 7, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 860; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("get_all_nodes_isteps_away", 1, 7, 7, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 861; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_L3_error:; __Pyx_AddTraceback("_sa.HieroCachingRuleFactory.get_all_nodes_isteps_away", __pyx_clineno, __pyx_lineno, __pyx_filename); __Pyx_RefNannyFinishContext(); @@ -43968,7 +43963,7 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_15get_all_nodes_isteps_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":860 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":861 * return res * * def get_all_nodes_isteps_away(self, skip, i, spanlen, pathlen, fwords, next_states, reachable_buffer): # <<<<<<<<<<<<<< @@ -44006,41 +44001,41 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("get_all_nodes_isteps_away", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":862 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":863 * def get_all_nodes_isteps_away(self, skip, i, spanlen, pathlen, fwords, next_states, reachable_buffer): * cdef unsigned alt_it * frontier = [] # <<<<<<<<<<<<<< * if (i+spanlen+skip >= len(next_states)): * return frontier */ - __pyx_t_1 = PyList_New(0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 862; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyList_New(0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 863; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_v_frontier = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":863 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":864 * cdef unsigned alt_it * frontier = [] * if (i+spanlen+skip >= len(next_states)): # <<<<<<<<<<<<<< * return frontier * key = tuple([i,spanlen]) */ - __pyx_t_1 = PyNumber_Add(__pyx_v_i, __pyx_v_spanlen); 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if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 863; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 864; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":864 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":865 * frontier = [] * if (i+spanlen+skip >= len(next_states)): * return frontier # <<<<<<<<<<<<<< @@ -44055,14 +44050,14 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":865 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":866 * if (i+spanlen+skip >= len(next_states)): * return frontier * key = tuple([i,spanlen]) # <<<<<<<<<<<<<< * reachable = [] * if (key in reachable_buffer): */ - __pyx_t_4 = PyList_New(2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 865; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyList_New(2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 866; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_INCREF(__pyx_v_i); PyList_SET_ITEM(__pyx_t_4, 0, __pyx_v_i); @@ -44070,42 +44065,42 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ __Pyx_INCREF(__pyx_v_spanlen); PyList_SET_ITEM(__pyx_t_4, 1, __pyx_v_spanlen); __Pyx_GIVEREF(__pyx_v_spanlen); - __pyx_t_1 = ((PyObject *)PyList_AsTuple(__pyx_t_4)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 865; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = ((PyObject *)PyList_AsTuple(__pyx_t_4)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 866; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_1)); __Pyx_DECREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0; __pyx_v_key = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":866 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":867 * return frontier * key = tuple([i,spanlen]) * reachable = [] # <<<<<<<<<<<<<< * if (key in reachable_buffer): * reachable = reachable_buffer[key] */ - __pyx_t_1 = PyList_New(0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 866; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyList_New(0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 867; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_v_reachable = ((PyObject *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":867 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":868 * key = tuple([i,spanlen]) * reachable = [] * if (key in reachable_buffer): # <<<<<<<<<<<<<< * reachable = reachable_buffer[key] * else: */ - __pyx_t_5 = (__Pyx_PySequence_Contains(((PyObject *)__pyx_v_key), __pyx_v_reachable_buffer, Py_EQ)); if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 867; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = (__Pyx_PySequence_Contains(((PyObject *)__pyx_v_key), __pyx_v_reachable_buffer, Py_EQ)); if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 868; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":868 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":869 * reachable = [] * if (key in reachable_buffer): * reachable = reachable_buffer[key] # <<<<<<<<<<<<<< * else: * reachable = self.reachable(fwords, i, spanlen) */ - __pyx_t_1 = PyObject_GetItem(__pyx_v_reachable_buffer, ((PyObject *)__pyx_v_key)); if (!__pyx_t_1) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 868; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetItem(__pyx_v_reachable_buffer, ((PyObject *)__pyx_v_key)); if (!__pyx_t_1) {__pyx_filename = __pyx_f[8]; 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__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0; @@ -44142,18 +44137,18 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ __pyx_v_reachable = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":871 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":872 * else: * reachable = self.reachable(fwords, i, spanlen) * reachable_buffer[key] = reachable # <<<<<<<<<<<<<< * for nextreachable in reachable: * for next_id in next_states[nextreachable]: */ - if (PyObject_SetItem(__pyx_v_reachable_buffer, ((PyObject *)__pyx_v_key), __pyx_v_reachable) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 871; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyObject_SetItem(__pyx_v_reachable_buffer, ((PyObject *)__pyx_v_key), __pyx_v_reachable) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 872; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":872 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":873 * reachable = self.reachable(fwords, i, spanlen) * reachable_buffer[key] = reachable * for nextreachable in reachable: # <<<<<<<<<<<<<< @@ -44164,7 +44159,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ __pyx_t_2 = __pyx_v_reachable; __Pyx_INCREF(__pyx_t_2); __pyx_t_3 = 0; __pyx_t_6 = NULL; } else { - __pyx_t_3 = -1; __pyx_t_2 = PyObject_GetIter(__pyx_v_reachable); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 872; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = -1; __pyx_t_2 = PyObject_GetIter(__pyx_v_reachable); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 873; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __pyx_t_6 = Py_TYPE(__pyx_t_2)->tp_iternext; } @@ -44172,23 +44167,23 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ if (!__pyx_t_6 && PyList_CheckExact(__pyx_t_2)) { if (__pyx_t_3 >= PyList_GET_SIZE(__pyx_t_2)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_4 = PyList_GET_ITEM(__pyx_t_2, __pyx_t_3); __Pyx_INCREF(__pyx_t_4); __pyx_t_3++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 872; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyList_GET_ITEM(__pyx_t_2, __pyx_t_3); __Pyx_INCREF(__pyx_t_4); __pyx_t_3++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 873; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_4 = PySequence_ITEM(__pyx_t_2, __pyx_t_3); __pyx_t_3++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 872; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PySequence_ITEM(__pyx_t_2, __pyx_t_3); __pyx_t_3++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 873; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else if (!__pyx_t_6 && PyTuple_CheckExact(__pyx_t_2)) { if (__pyx_t_3 >= PyTuple_GET_SIZE(__pyx_t_2)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_4 = PyTuple_GET_ITEM(__pyx_t_2, __pyx_t_3); __Pyx_INCREF(__pyx_t_4); __pyx_t_3++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 872; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_GET_ITEM(__pyx_t_2, __pyx_t_3); __Pyx_INCREF(__pyx_t_4); __pyx_t_3++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 873; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_4 = PySequence_ITEM(__pyx_t_2, __pyx_t_3); __pyx_t_3++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 872; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PySequence_ITEM(__pyx_t_2, __pyx_t_3); __pyx_t_3++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 873; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else { __pyx_t_4 = __pyx_t_6(__pyx_t_2); if (unlikely(!__pyx_t_4)) { if (PyErr_Occurred()) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 872; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 873; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } break; } @@ -44198,20 +44193,20 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ __pyx_v_nextreachable = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":873 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":874 * reachable_buffer[key] = reachable * for nextreachable in reachable: * for next_id in next_states[nextreachable]: # <<<<<<<<<<<<<< * jump = self.shortest(fwords,i,next_id) * if jump < skip: */ - __pyx_t_4 = PyObject_GetItem(__pyx_v_next_states, __pyx_v_nextreachable); if (!__pyx_t_4) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 873; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_GetItem(__pyx_v_next_states, __pyx_v_nextreachable); if (!__pyx_t_4) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 874; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); if (PyList_CheckExact(__pyx_t_4) || PyTuple_CheckExact(__pyx_t_4)) { __pyx_t_1 = __pyx_t_4; __Pyx_INCREF(__pyx_t_1); __pyx_t_7 = 0; __pyx_t_8 = NULL; } else { - __pyx_t_7 = -1; __pyx_t_1 = PyObject_GetIter(__pyx_t_4); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 873; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = -1; __pyx_t_1 = PyObject_GetIter(__pyx_t_4); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 874; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_t_8 = Py_TYPE(__pyx_t_1)->tp_iternext; } @@ -44220,23 +44215,23 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ if (!__pyx_t_8 && PyList_CheckExact(__pyx_t_1)) { if (__pyx_t_7 >= PyList_GET_SIZE(__pyx_t_1)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_4 = PyList_GET_ITEM(__pyx_t_1, __pyx_t_7); __Pyx_INCREF(__pyx_t_4); __pyx_t_7++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 873; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyList_GET_ITEM(__pyx_t_1, __pyx_t_7); __Pyx_INCREF(__pyx_t_4); __pyx_t_7++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 874; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_4 = PySequence_ITEM(__pyx_t_1, __pyx_t_7); __pyx_t_7++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 873; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PySequence_ITEM(__pyx_t_1, __pyx_t_7); __pyx_t_7++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 874; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else if (!__pyx_t_8 && PyTuple_CheckExact(__pyx_t_1)) { if (__pyx_t_7 >= PyTuple_GET_SIZE(__pyx_t_1)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_4 = PyTuple_GET_ITEM(__pyx_t_1, __pyx_t_7); __Pyx_INCREF(__pyx_t_4); __pyx_t_7++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 873; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_GET_ITEM(__pyx_t_1, __pyx_t_7); __Pyx_INCREF(__pyx_t_4); __pyx_t_7++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 874; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_4 = PySequence_ITEM(__pyx_t_1, __pyx_t_7); __pyx_t_7++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 873; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PySequence_ITEM(__pyx_t_1, __pyx_t_7); __pyx_t_7++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 874; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else { __pyx_t_4 = __pyx_t_8(__pyx_t_1); if (unlikely(!__pyx_t_4)) { if (PyErr_Occurred()) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 873; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 874; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } break; } @@ -44246,16 +44241,16 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ __pyx_v_next_id = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":874 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":875 * for nextreachable in reachable: * for next_id in next_states[nextreachable]: * jump = self.shortest(fwords,i,next_id) # <<<<<<<<<<<<<< * if jump < skip: * continue */ - __pyx_t_4 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s__shortest); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 874; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s__shortest); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 875; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_9 = PyTuple_New(3); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 874; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PyTuple_New(3); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 875; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_9); __Pyx_INCREF(__pyx_v_fwords); PyTuple_SET_ITEM(__pyx_t_9, 0, __pyx_v_fwords); @@ -44266,7 +44261,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ __Pyx_INCREF(__pyx_v_next_id); PyTuple_SET_ITEM(__pyx_t_9, 2, __pyx_v_next_id); __Pyx_GIVEREF(__pyx_v_next_id); - __pyx_t_10 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_t_9), NULL); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 874; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_t_9), NULL); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 875; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_9)); __pyx_t_9 = 0; @@ -44274,19 +44269,19 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ __pyx_v_jump = __pyx_t_10; __pyx_t_10 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":875 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":876 * for next_id in next_states[nextreachable]: * jump = self.shortest(fwords,i,next_id) * if jump < skip: # <<<<<<<<<<<<<< * continue * if pathlen+jump <= self.max_initial_size: */ - __pyx_t_10 = PyObject_RichCompare(__pyx_v_jump, __pyx_v_skip, Py_LT); __Pyx_XGOTREF(__pyx_t_10); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 875; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_5 = __Pyx_PyObject_IsTrue(__pyx_t_10); if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 875; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyObject_RichCompare(__pyx_v_jump, __pyx_v_skip, Py_LT); __Pyx_XGOTREF(__pyx_t_10); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 876; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __Pyx_PyObject_IsTrue(__pyx_t_10); if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 876; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":876 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":877 * jump = self.shortest(fwords,i,next_id) * if jump < skip: * continue # <<<<<<<<<<<<<< @@ -44298,50 +44293,50 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ } __pyx_L9:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":877 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":878 * if jump < skip: * continue * if pathlen+jump <= self.max_initial_size: # <<<<<<<<<<<<<< * for alt_id in range(len(fwords[next_id])): * if (fwords[next_id][alt_id][0] != EPSILON): */ - __pyx_t_10 = PyNumber_Add(__pyx_v_pathlen, __pyx_v_jump); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 877; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyNumber_Add(__pyx_v_pathlen, __pyx_v_jump); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 878; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); - __pyx_t_9 = PyInt_FromLong(__pyx_v_self->max_initial_size); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 877; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PyInt_FromLong(__pyx_v_self->max_initial_size); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 878; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_9); - __pyx_t_4 = PyObject_RichCompare(__pyx_t_10, __pyx_t_9, Py_LE); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 877; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_RichCompare(__pyx_t_10, __pyx_t_9, Py_LE); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 878; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; - __pyx_t_5 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 877; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 878; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":878 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":879 * continue * if pathlen+jump <= self.max_initial_size: * for alt_id in range(len(fwords[next_id])): # <<<<<<<<<<<<<< * if (fwords[next_id][alt_id][0] != EPSILON): * newel = (next_id,alt_id,pathlen+jump) */ - __pyx_t_4 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_next_id); if (!__pyx_t_4) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 878; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_next_id); if (!__pyx_t_4) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_11 = PyObject_Length(__pyx_t_4); if (unlikely(__pyx_t_11 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 878; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_11 = PyObject_Length(__pyx_t_4); if (unlikely(__pyx_t_11 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - __pyx_t_4 = PyInt_FromSsize_t(__pyx_t_11); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 878; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyInt_FromSsize_t(__pyx_t_11); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_9 = PyTuple_New(1); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 878; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PyTuple_New(1); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_9); PyTuple_SET_ITEM(__pyx_t_9, 0, __pyx_t_4); __Pyx_GIVEREF(__pyx_t_4); __pyx_t_4 = 0; - __pyx_t_4 = PyObject_Call(__pyx_builtin_range, ((PyObject *)__pyx_t_9), NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 878; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_Call(__pyx_builtin_range, ((PyObject *)__pyx_t_9), NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(((PyObject *)__pyx_t_9)); __pyx_t_9 = 0; if (PyList_CheckExact(__pyx_t_4) || PyTuple_CheckExact(__pyx_t_4)) { __pyx_t_9 = __pyx_t_4; __Pyx_INCREF(__pyx_t_9); __pyx_t_11 = 0; __pyx_t_12 = NULL; } else { - __pyx_t_11 = -1; __pyx_t_9 = PyObject_GetIter(__pyx_t_4); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 878; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_11 = -1; __pyx_t_9 = PyObject_GetIter(__pyx_t_4); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_9); __pyx_t_12 = Py_TYPE(__pyx_t_9)->tp_iternext; } @@ -44350,23 +44345,23 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ if (!__pyx_t_12 && PyList_CheckExact(__pyx_t_9)) { if (__pyx_t_11 >= PyList_GET_SIZE(__pyx_t_9)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_4 = PyList_GET_ITEM(__pyx_t_9, __pyx_t_11); __Pyx_INCREF(__pyx_t_4); __pyx_t_11++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 878; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyList_GET_ITEM(__pyx_t_9, __pyx_t_11); __Pyx_INCREF(__pyx_t_4); __pyx_t_11++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_4 = PySequence_ITEM(__pyx_t_9, __pyx_t_11); __pyx_t_11++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 878; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PySequence_ITEM(__pyx_t_9, __pyx_t_11); __pyx_t_11++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else if (!__pyx_t_12 && PyTuple_CheckExact(__pyx_t_9)) { if (__pyx_t_11 >= PyTuple_GET_SIZE(__pyx_t_9)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_4 = PyTuple_GET_ITEM(__pyx_t_9, __pyx_t_11); __Pyx_INCREF(__pyx_t_4); __pyx_t_11++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 878; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyTuple_GET_ITEM(__pyx_t_9, __pyx_t_11); __Pyx_INCREF(__pyx_t_4); __pyx_t_11++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_4 = PySequence_ITEM(__pyx_t_9, __pyx_t_11); __pyx_t_11++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 878; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PySequence_ITEM(__pyx_t_9, __pyx_t_11); __pyx_t_11++; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else { __pyx_t_4 = __pyx_t_12(__pyx_t_9); if (unlikely(!__pyx_t_4)) { if (PyErr_Occurred()) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 878; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } break; } @@ -44376,40 +44371,40 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ __pyx_v_alt_id = __pyx_t_4; __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":879 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":880 * if pathlen+jump <= self.max_initial_size: * for alt_id in range(len(fwords[next_id])): * if (fwords[next_id][alt_id][0] != EPSILON): # <<<<<<<<<<<<<< * newel = (next_id,alt_id,pathlen+jump) * if newel not in frontier: */ - __pyx_t_4 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_next_id); if (!__pyx_t_4) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_next_id); if (!__pyx_t_4) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 880; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_10 = PyObject_GetItem(__pyx_t_4, __pyx_v_alt_id); if (!__pyx_t_10) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyObject_GetItem(__pyx_t_4, __pyx_v_alt_id); if (!__pyx_t_10) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 880; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - __pyx_t_4 = __Pyx_GetItemInt(__pyx_t_10, 0, sizeof(long), PyInt_FromLong); if (!__pyx_t_4) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = __Pyx_GetItemInt(__pyx_t_10, 0, sizeof(long), PyInt_FromLong); if (!__pyx_t_4) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 880; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; - __pyx_t_10 = PyInt_FromLong(__pyx_v_3_sa_EPSILON); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyInt_FromLong(__pyx_v_3_sa_EPSILON); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 880; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); - __pyx_t_13 = PyObject_RichCompare(__pyx_t_4, __pyx_t_10, Py_NE); __Pyx_XGOTREF(__pyx_t_13); if (unlikely(!__pyx_t_13)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = PyObject_RichCompare(__pyx_t_4, __pyx_t_10, Py_NE); __Pyx_XGOTREF(__pyx_t_13); if (unlikely(!__pyx_t_13)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 880; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; - __pyx_t_5 = __Pyx_PyObject_IsTrue(__pyx_t_13); if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 879; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __Pyx_PyObject_IsTrue(__pyx_t_13); if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 880; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_13); __pyx_t_13 = 0; if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":880 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":881 * for alt_id in range(len(fwords[next_id])): * if (fwords[next_id][alt_id][0] != EPSILON): * newel = (next_id,alt_id,pathlen+jump) # <<<<<<<<<<<<<< * if newel not in frontier: * frontier.append((next_id,alt_id,pathlen+jump)) */ - __pyx_t_13 = PyNumber_Add(__pyx_v_pathlen, __pyx_v_jump); if (unlikely(!__pyx_t_13)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 880; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = PyNumber_Add(__pyx_v_pathlen, __pyx_v_jump); if (unlikely(!__pyx_t_13)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 881; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_13); - __pyx_t_10 = PyTuple_New(3); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 880; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyTuple_New(3); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 881; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); __Pyx_INCREF(__pyx_v_next_id); PyTuple_SET_ITEM(__pyx_t_10, 0, __pyx_v_next_id); @@ -44424,26 +44419,26 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ __pyx_v_newel = __pyx_t_10; __pyx_t_10 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":881 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":882 * if (fwords[next_id][alt_id][0] != EPSILON): * newel = (next_id,alt_id,pathlen+jump) * if newel not in frontier: # <<<<<<<<<<<<<< * frontier.append((next_id,alt_id,pathlen+jump)) * return frontier */ - __pyx_t_5 = (__Pyx_PySequence_Contains(((PyObject *)__pyx_v_newel), ((PyObject *)__pyx_v_frontier), Py_NE)); if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 881; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = (__Pyx_PySequence_Contains(((PyObject *)__pyx_v_newel), ((PyObject *)__pyx_v_frontier), Py_NE)); if (unlikely(__pyx_t_5 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 882; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":882 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":883 * newel = (next_id,alt_id,pathlen+jump) * if newel not in frontier: * frontier.append((next_id,alt_id,pathlen+jump)) # <<<<<<<<<<<<<< * return frontier * */ - __pyx_t_10 = PyNumber_Add(__pyx_v_pathlen, __pyx_v_jump); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 882; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyNumber_Add(__pyx_v_pathlen, __pyx_v_jump); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 883; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); - __pyx_t_13 = PyTuple_New(3); if (unlikely(!__pyx_t_13)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 882; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = PyTuple_New(3); if (unlikely(!__pyx_t_13)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 883; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_13); __Pyx_INCREF(__pyx_v_next_id); PyTuple_SET_ITEM(__pyx_t_13, 0, __pyx_v_next_id); @@ -44454,7 +44449,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ PyTuple_SET_ITEM(__pyx_t_13, 2, __pyx_t_10); __Pyx_GIVEREF(__pyx_t_10); __pyx_t_10 = 0; - __pyx_t_14 = PyList_Append(__pyx_v_frontier, ((PyObject *)__pyx_t_13)); if (unlikely(__pyx_t_14 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 882; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyList_Append(__pyx_v_frontier, ((PyObject *)__pyx_t_13)); if (unlikely(__pyx_t_14 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 883; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(((PyObject *)__pyx_t_13)); __pyx_t_13 = 0; goto __pyx_L14; } @@ -44473,7 +44468,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_14get_all_nodes_isteps_ } __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":883 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":884 * if newel not in frontier: * frontier.append((next_id,alt_id,pathlen+jump)) * return frontier # <<<<<<<<<<<<<< @@ -44540,16 +44535,16 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_17reachable(PyObject *_ case 1: if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__ifrom)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("reachable", 1, 3, 3, 1); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 885; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("reachable", 1, 3, 3, 1); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 886; 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__pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("reachable", 1, 3, 3, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 885; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("reachable", 1, 3, 3, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 886; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_L3_error:; __Pyx_AddTraceback("_sa.HieroCachingRuleFactory.reachable", __pyx_clineno, __pyx_lineno, __pyx_filename); __Pyx_RefNannyFinishContext(); @@ -44575,7 +44570,7 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_17reachable(PyObject *_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":885 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":886 * return frontier * * def reachable(self, fwords, ifrom, dist): # <<<<<<<<<<<<<< @@ -44605,35 +44600,35 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_16reachable(struct __py int __pyx_clineno = 0; 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if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 889; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_ifrom); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __pyx_t_2 = PyObject_Length(__pyx_t_3); if (unlikely(__pyx_t_2 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 889; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Length(__pyx_t_3); if (unlikely(__pyx_t_2 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - __pyx_t_3 = PyInt_FromSsize_t(__pyx_t_2); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 889; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyInt_FromSsize_t(__pyx_t_2); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 889; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); PyTuple_SET_ITEM(__pyx_t_1, 0, __pyx_t_3); __Pyx_GIVEREF(__pyx_t_3); __pyx_t_3 = 0; - __pyx_t_3 = PyObject_Call(__pyx_builtin_range, ((PyObject *)__pyx_t_1), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 889; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_Call(__pyx_builtin_range, ((PyObject *)__pyx_t_1), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; if (PyList_CheckExact(__pyx_t_3) || PyTuple_CheckExact(__pyx_t_3)) { __pyx_t_1 = __pyx_t_3; __Pyx_INCREF(__pyx_t_1); __pyx_t_2 = 0; __pyx_t_5 = NULL; } else { - __pyx_t_2 = -1; __pyx_t_1 = PyObject_GetIter(__pyx_t_3); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 889; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = -1; __pyx_t_1 = PyObject_GetIter(__pyx_t_3); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_t_5 = Py_TYPE(__pyx_t_1)->tp_iternext; } @@ -44682,23 +44677,23 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_16reachable(struct __py if (!__pyx_t_5 && PyList_CheckExact(__pyx_t_1)) { if (__pyx_t_2 >= PyList_GET_SIZE(__pyx_t_1)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_3 = PyList_GET_ITEM(__pyx_t_1, __pyx_t_2); __Pyx_INCREF(__pyx_t_3); __pyx_t_2++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 889; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyList_GET_ITEM(__pyx_t_1, __pyx_t_2); __Pyx_INCREF(__pyx_t_3); __pyx_t_2++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_3 = PySequence_ITEM(__pyx_t_1, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 889; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PySequence_ITEM(__pyx_t_1, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else if (!__pyx_t_5 && PyTuple_CheckExact(__pyx_t_1)) { if (__pyx_t_2 >= PyTuple_GET_SIZE(__pyx_t_1)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_3 = PyTuple_GET_ITEM(__pyx_t_1, __pyx_t_2); __Pyx_INCREF(__pyx_t_3); __pyx_t_2++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 889; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyTuple_GET_ITEM(__pyx_t_1, __pyx_t_2); __Pyx_INCREF(__pyx_t_3); __pyx_t_2++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_3 = PySequence_ITEM(__pyx_t_1, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 889; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PySequence_ITEM(__pyx_t_1, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else { __pyx_t_3 = __pyx_t_5(__pyx_t_1); if (unlikely(!__pyx_t_3)) { if (PyErr_Occurred()) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 889; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } break; } @@ -44708,53 +44703,53 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_16reachable(struct __py __pyx_v_alt_id = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":890 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":891 * return ret * for alt_id in range(len(fwords[ifrom])): * if (fwords[ifrom][alt_id][0] == EPSILON): # <<<<<<<<<<<<<< * ret.extend(self.reachable(fwords,ifrom+fwords[ifrom][alt_id][2],dist)) * else: */ - __pyx_t_3 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_ifrom); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_ifrom); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 891; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __pyx_t_6 = PyObject_GetItem(__pyx_t_3, __pyx_v_alt_id); if (!__pyx_t_6) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyObject_GetItem(__pyx_t_3, __pyx_v_alt_id); if (!__pyx_t_6) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 891; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - __pyx_t_3 = __Pyx_GetItemInt(__pyx_t_6, 0, sizeof(long), PyInt_FromLong); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __Pyx_GetItemInt(__pyx_t_6, 0, sizeof(long), PyInt_FromLong); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 891; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - __pyx_t_6 = PyInt_FromLong(__pyx_v_3_sa_EPSILON); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyInt_FromLong(__pyx_v_3_sa_EPSILON); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 891; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_7 = PyObject_RichCompare(__pyx_t_3, __pyx_t_6, Py_EQ); __Pyx_XGOTREF(__pyx_t_7); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyObject_RichCompare(__pyx_t_3, __pyx_t_6, Py_EQ); __Pyx_XGOTREF(__pyx_t_7); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 891; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - __pyx_t_4 = __Pyx_PyObject_IsTrue(__pyx_t_7); if (unlikely(__pyx_t_4 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 890; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = __Pyx_PyObject_IsTrue(__pyx_t_7); if (unlikely(__pyx_t_4 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 891; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":891 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":892 * for alt_id in range(len(fwords[ifrom])): * if (fwords[ifrom][alt_id][0] == EPSILON): * ret.extend(self.reachable(fwords,ifrom+fwords[ifrom][alt_id][2],dist)) # <<<<<<<<<<<<<< * else: * if (dist==0): */ - __pyx_t_7 = PyObject_GetAttr(((PyObject *)__pyx_v_ret), __pyx_n_s__extend); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 891; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyObject_GetAttr(((PyObject *)__pyx_v_ret), __pyx_n_s__extend); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 892; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); - __pyx_t_6 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s__reachable); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 891; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s__reachable); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 892; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_3 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_ifrom); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 891; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_ifrom); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 892; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __pyx_t_8 = PyObject_GetItem(__pyx_t_3, __pyx_v_alt_id); if (!__pyx_t_8) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 891; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_8 = PyObject_GetItem(__pyx_t_3, __pyx_v_alt_id); if (!__pyx_t_8) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 892; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_8); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - __pyx_t_3 = __Pyx_GetItemInt(__pyx_t_8, 2, sizeof(long), PyInt_FromLong); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 891; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __Pyx_GetItemInt(__pyx_t_8, 2, sizeof(long), PyInt_FromLong); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 892; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0; - __pyx_t_8 = PyNumber_Add(__pyx_v_ifrom, __pyx_t_3); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 891; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_8 = PyNumber_Add(__pyx_v_ifrom, __pyx_t_3); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 892; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_8); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - __pyx_t_3 = PyTuple_New(3); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 891; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyTuple_New(3); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 892; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_INCREF(__pyx_v_fwords); PyTuple_SET_ITEM(__pyx_t_3, 0, __pyx_v_fwords); @@ -44765,16 +44760,16 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_16reachable(struct __py PyTuple_SET_ITEM(__pyx_t_3, 2, __pyx_v_dist); __Pyx_GIVEREF(__pyx_v_dist); __pyx_t_8 = 0; - __pyx_t_8 = PyObject_Call(__pyx_t_6, ((PyObject *)__pyx_t_3), NULL); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 891; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_8 = PyObject_Call(__pyx_t_6, ((PyObject *)__pyx_t_3), NULL); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 892; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_8); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_3)); __pyx_t_3 = 0; - __pyx_t_3 = PyTuple_New(1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 891; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyTuple_New(1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 892; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); PyTuple_SET_ITEM(__pyx_t_3, 0, __pyx_t_8); __Pyx_GIVEREF(__pyx_t_8); __pyx_t_8 = 0; - __pyx_t_8 = PyObject_Call(__pyx_t_7, ((PyObject *)__pyx_t_3), NULL); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 891; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_8 = PyObject_Call(__pyx_t_7, ((PyObject *)__pyx_t_3), NULL); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 892; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_8); __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_3)); __pyx_t_3 = 0; @@ -44783,36 +44778,36 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_16reachable(struct __py } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":893 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":894 * ret.extend(self.reachable(fwords,ifrom+fwords[ifrom][alt_id][2],dist)) * else: * if (dist==0): # <<<<<<<<<<<<<< * if (ifrom not in ret): * ret.append(ifrom) */ - __pyx_t_8 = PyObject_RichCompare(__pyx_v_dist, __pyx_int_0, Py_EQ); __Pyx_XGOTREF(__pyx_t_8); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 893; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_4 = __Pyx_PyObject_IsTrue(__pyx_t_8); if (unlikely(__pyx_t_4 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 893; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_8 = PyObject_RichCompare(__pyx_v_dist, __pyx_int_0, Py_EQ); __Pyx_XGOTREF(__pyx_t_8); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 894; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = __Pyx_PyObject_IsTrue(__pyx_t_8); if (unlikely(__pyx_t_4 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 894; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0; if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":894 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":895 * else: * if (dist==0): * if (ifrom not in ret): # <<<<<<<<<<<<<< * ret.append(ifrom) * else: */ - __pyx_t_4 = (__Pyx_PySequence_Contains(__pyx_v_ifrom, ((PyObject *)__pyx_v_ret), Py_NE)); if (unlikely(__pyx_t_4 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 894; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = (__Pyx_PySequence_Contains(__pyx_v_ifrom, ((PyObject *)__pyx_v_ret), Py_NE)); if (unlikely(__pyx_t_4 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 895; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":895 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":896 * if (dist==0): * if (ifrom not in ret): * ret.append(ifrom) # <<<<<<<<<<<<<< * else: * for ifromchild in self.reachable(fwords,ifrom+fwords[ifrom][alt_id][2],dist-1): */ - __pyx_t_9 = PyList_Append(__pyx_v_ret, __pyx_v_ifrom); if (unlikely(__pyx_t_9 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 895; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PyList_Append(__pyx_v_ret, __pyx_v_ifrom); if (unlikely(__pyx_t_9 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 896; __pyx_clineno = __LINE__; goto __pyx_L1_error;} goto __pyx_L8; } __pyx_L8:; @@ -44820,29 +44815,29 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_16reachable(struct __py } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":897 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":898 * ret.append(ifrom) * else: * for ifromchild in self.reachable(fwords,ifrom+fwords[ifrom][alt_id][2],dist-1): # <<<<<<<<<<<<<< * if (ifromchild not in ret): * ret.append(ifromchild) */ - __pyx_t_8 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s__reachable); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 897; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_8 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s__reachable); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 898; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_8); - __pyx_t_3 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_ifrom); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 897; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_ifrom); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 898; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __pyx_t_7 = PyObject_GetItem(__pyx_t_3, __pyx_v_alt_id); if (!__pyx_t_7) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 897; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyObject_GetItem(__pyx_t_3, __pyx_v_alt_id); if (!__pyx_t_7) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 898; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - __pyx_t_3 = __Pyx_GetItemInt(__pyx_t_7, 2, sizeof(long), PyInt_FromLong); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 897; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __Pyx_GetItemInt(__pyx_t_7, 2, sizeof(long), PyInt_FromLong); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 898; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; - __pyx_t_7 = PyNumber_Add(__pyx_v_ifrom, __pyx_t_3); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 897; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyNumber_Add(__pyx_v_ifrom, __pyx_t_3); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 898; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - __pyx_t_3 = PyNumber_Subtract(__pyx_v_dist, __pyx_int_1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 897; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyNumber_Subtract(__pyx_v_dist, __pyx_int_1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 898; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __pyx_t_6 = PyTuple_New(3); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 897; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyTuple_New(3); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 898; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_INCREF(__pyx_v_fwords); PyTuple_SET_ITEM(__pyx_t_6, 0, __pyx_v_fwords); @@ -44853,7 +44848,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_16reachable(struct __py __Pyx_GIVEREF(__pyx_t_3); __pyx_t_7 = 0; __pyx_t_3 = 0; - __pyx_t_3 = PyObject_Call(__pyx_t_8, ((PyObject *)__pyx_t_6), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 897; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_Call(__pyx_t_8, ((PyObject *)__pyx_t_6), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 898; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_6)); __pyx_t_6 = 0; @@ -44861,7 +44856,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_16reachable(struct __py __pyx_t_6 = __pyx_t_3; __Pyx_INCREF(__pyx_t_6); __pyx_t_10 = 0; __pyx_t_11 = NULL; } else { - __pyx_t_10 = -1; __pyx_t_6 = PyObject_GetIter(__pyx_t_3); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 897; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = -1; __pyx_t_6 = PyObject_GetIter(__pyx_t_3); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 898; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __pyx_t_11 = Py_TYPE(__pyx_t_6)->tp_iternext; } @@ -44870,23 +44865,23 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_16reachable(struct __py if (!__pyx_t_11 && PyList_CheckExact(__pyx_t_6)) { if (__pyx_t_10 >= PyList_GET_SIZE(__pyx_t_6)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_3 = PyList_GET_ITEM(__pyx_t_6, __pyx_t_10); __Pyx_INCREF(__pyx_t_3); __pyx_t_10++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 897; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyList_GET_ITEM(__pyx_t_6, __pyx_t_10); __Pyx_INCREF(__pyx_t_3); __pyx_t_10++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 898; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_3 = PySequence_ITEM(__pyx_t_6, __pyx_t_10); __pyx_t_10++; if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 897; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PySequence_ITEM(__pyx_t_6, __pyx_t_10); __pyx_t_10++; if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 898; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else if (!__pyx_t_11 && PyTuple_CheckExact(__pyx_t_6)) { if (__pyx_t_10 >= PyTuple_GET_SIZE(__pyx_t_6)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_3 = PyTuple_GET_ITEM(__pyx_t_6, __pyx_t_10); __Pyx_INCREF(__pyx_t_3); __pyx_t_10++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 897; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyTuple_GET_ITEM(__pyx_t_6, __pyx_t_10); __Pyx_INCREF(__pyx_t_3); __pyx_t_10++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 898; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_3 = PySequence_ITEM(__pyx_t_6, __pyx_t_10); __pyx_t_10++; if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 897; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PySequence_ITEM(__pyx_t_6, __pyx_t_10); __pyx_t_10++; if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 898; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else { __pyx_t_3 = __pyx_t_11(__pyx_t_6); if (unlikely(!__pyx_t_3)) { if (PyErr_Occurred()) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 897; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 898; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } break; } @@ -44896,24 +44891,24 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_16reachable(struct __py __pyx_v_ifromchild = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":898 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":899 * else: * for ifromchild in self.reachable(fwords,ifrom+fwords[ifrom][alt_id][2],dist-1): * if (ifromchild not in ret): # <<<<<<<<<<<<<< * ret.append(ifromchild) * */ - __pyx_t_4 = (__Pyx_PySequence_Contains(__pyx_v_ifromchild, ((PyObject *)__pyx_v_ret), Py_NE)); if (unlikely(__pyx_t_4 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 898; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = (__Pyx_PySequence_Contains(__pyx_v_ifromchild, ((PyObject *)__pyx_v_ret), Py_NE)); if (unlikely(__pyx_t_4 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 899; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":899 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":900 * for ifromchild in self.reachable(fwords,ifrom+fwords[ifrom][alt_id][2],dist-1): * if (ifromchild not in ret): * ret.append(ifromchild) # <<<<<<<<<<<<<< * * return ret */ - __pyx_t_9 = PyList_Append(__pyx_v_ret, __pyx_v_ifromchild); if (unlikely(__pyx_t_9 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 899; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PyList_Append(__pyx_v_ret, __pyx_v_ifromchild); if (unlikely(__pyx_t_9 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 900; __pyx_clineno = __LINE__; goto __pyx_L1_error;} goto __pyx_L11; } __pyx_L11:; @@ -44926,7 +44921,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_16reachable(struct __py } __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":901 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":902 * ret.append(ifromchild) * * return ret # <<<<<<<<<<<<<< @@ -44987,16 +44982,16 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_19shortest(PyObject *__ case 1: if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__ifrom)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("shortest", 1, 3, 3, 1); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 903; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("shortest", 1, 3, 3, 1); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 904; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 2: if (likely((values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__ito)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("shortest", 1, 3, 3, 2); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 903; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("shortest", 1, 3, 3, 2); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 904; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "shortest") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 903; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "shortest") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 904; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } else if (PyTuple_GET_SIZE(__pyx_args) != 3) { goto __pyx_L5_argtuple_error; @@ -45011,7 +45006,7 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_19shortest(PyObject *__ } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("shortest", 1, 3, 3, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 903; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("shortest", 1, 3, 3, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[8]; __pyx_lineno = 904; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_L3_error:; __Pyx_AddTraceback("_sa.HieroCachingRuleFactory.shortest", __pyx_clineno, __pyx_lineno, __pyx_filename); __Pyx_RefNannyFinishContext(); @@ -45022,7 +45017,7 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_19shortest(PyObject *__ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":903 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":904 * return ret * * def shortest(self, fwords, ifrom, ito): # <<<<<<<<<<<<<< @@ -45047,7 +45042,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_18shortest(struct __pyx int __pyx_clineno = 0; __Pyx_RefNannySetupContext("shortest", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":905 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":906 * def shortest(self, fwords, ifrom, ito): * cdef unsigned alt_id * min = 1000 # <<<<<<<<<<<<<< @@ -45057,19 +45052,19 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_18shortest(struct __pyx __Pyx_INCREF(__pyx_int_1000); __pyx_v_min = __pyx_int_1000; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":906 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":907 * cdef unsigned alt_id * min = 1000 * if (ifrom > ito): # <<<<<<<<<<<<<< * return min * if (ifrom == ito): */ - __pyx_t_1 = PyObject_RichCompare(__pyx_v_ifrom, __pyx_v_ito, Py_GT); __Pyx_XGOTREF(__pyx_t_1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 906; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_2 = __Pyx_PyObject_IsTrue(__pyx_t_1); if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 906; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_RichCompare(__pyx_v_ifrom, __pyx_v_ito, Py_GT); __Pyx_XGOTREF(__pyx_t_1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 907; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = __Pyx_PyObject_IsTrue(__pyx_t_1); if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 907; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":907 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":908 * min = 1000 * if (ifrom > ito): * return min # <<<<<<<<<<<<<< @@ -45084,19 +45079,19 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_18shortest(struct __pyx } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":908 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":909 * if (ifrom > ito): * return min * if (ifrom == ito): # <<<<<<<<<<<<<< * return 0 * for alt_id in range(len(fwords[ifrom])): */ - __pyx_t_1 = PyObject_RichCompare(__pyx_v_ifrom, __pyx_v_ito, Py_EQ); __Pyx_XGOTREF(__pyx_t_1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 908; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_2 = __Pyx_PyObject_IsTrue(__pyx_t_1); if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 908; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_RichCompare(__pyx_v_ifrom, __pyx_v_ito, Py_EQ); __Pyx_XGOTREF(__pyx_t_1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 909; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = __Pyx_PyObject_IsTrue(__pyx_t_1); if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 909; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":909 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":910 * return min * if (ifrom == ito): * return 0 # <<<<<<<<<<<<<< @@ -45111,41 +45106,41 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_18shortest(struct __pyx } __pyx_L4:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":910 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":911 * if (ifrom == ito): * return 0 * for alt_id in range(len(fwords[ifrom])): # <<<<<<<<<<<<<< * currmin = self.shortest(fwords,ifrom+fwords[ifrom][alt_id][2],ito) * if (fwords[ifrom][alt_id][0] != EPSILON): */ - __pyx_t_1 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_ifrom); if (!__pyx_t_1) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 910; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_ifrom); if (!__pyx_t_1) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 911; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_3 = PyObject_Length(__pyx_t_1); if (unlikely(__pyx_t_3 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 910; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_Length(__pyx_t_1); if (unlikely(__pyx_t_3 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 911; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { __pyx_v_alt_id = __pyx_t_4; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":911 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":912 * return 0 * for alt_id in range(len(fwords[ifrom])): * currmin = self.shortest(fwords,ifrom+fwords[ifrom][alt_id][2],ito) # <<<<<<<<<<<<<< * if (fwords[ifrom][alt_id][0] != EPSILON): * currmin += 1 */ - __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s__shortest); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 911; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self), __pyx_n_s__shortest); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 912; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_5 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_ifrom); if (!__pyx_t_5) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 911; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_GetItem(__pyx_v_fwords, __pyx_v_ifrom); if (!__pyx_t_5) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 912; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __pyx_t_6 = __Pyx_GetItemInt(__pyx_t_5, __pyx_v_alt_id, sizeof(unsigned int)+1, PyLong_FromUnsignedLong); if (!__pyx_t_6) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 911; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = __Pyx_GetItemInt(__pyx_t_5, __pyx_v_alt_id, sizeof(unsigned int)+1, PyLong_FromUnsignedLong); if (!__pyx_t_6) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 912; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_5 = __Pyx_GetItemInt(__pyx_t_6, 2, sizeof(long), PyInt_FromLong); if (!__pyx_t_5) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 911; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __Pyx_GetItemInt(__pyx_t_6, 2, sizeof(long), PyInt_FromLong); if (!__pyx_t_5) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 912; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - __pyx_t_6 = PyNumber_Add(__pyx_v_ifrom, __pyx_t_5); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 911; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyNumber_Add(__pyx_v_ifrom, __pyx_t_5); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 912; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_5 = PyTuple_New(3); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 911; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyTuple_New(3); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 912; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_INCREF(__pyx_v_fwords); PyTuple_SET_ITEM(__pyx_t_5, 0, __pyx_v_fwords); @@ -45156,7 +45151,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_18shortest(struct __pyx PyTuple_SET_ITEM(__pyx_t_5, 2, __pyx_v_ito); __Pyx_GIVEREF(__pyx_v_ito); __pyx_t_6 = 0; - __pyx_t_6 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_t_5), NULL); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 911; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_t_5), NULL); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 912; __pyx_clineno = __LINE__; 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if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 913; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":913 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":914 * currmin = self.shortest(fwords,ifrom+fwords[ifrom][alt_id][2],ito) * if (fwords[ifrom][alt_id][0] != EPSILON): * currmin += 1 # <<<<<<<<<<<<<< * if (currmin<min): * min = currmin */ - __pyx_t_1 = PyNumber_InPlaceAdd(__pyx_v_currmin, __pyx_int_1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 913; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyNumber_InPlaceAdd(__pyx_v_currmin, __pyx_int_1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 914; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_v_currmin); __pyx_v_currmin = __pyx_t_1; @@ -45204,19 +45199,19 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_18shortest(struct __pyx } __pyx_L7:; 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{__pyx_filename = __pyx_f[8]; __pyx_lineno = 919; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } case 2: if (kw_args > 0) { @@ -45299,7 +45294,7 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_21get_next_states(PyObj } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "get_next_states") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 918; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "get_next_states") < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 919; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } else { switch (PyTuple_GET_SIZE(__pyx_args)) { @@ -45316,7 +45311,7 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_21get_next_states(PyObj } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("get_next_states", 0, 2, 3, PyTuple_GET_SIZE(__pyx_args)); 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__pyx_lineno = 930; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_1 = PySequence_ITEM(__pyx_t_5, __pyx_t_3); __pyx_t_3++; if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 929; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PySequence_ITEM(__pyx_t_5, __pyx_t_3); __pyx_t_3++; if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 930; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else { __pyx_t_1 = __pyx_t_9(__pyx_t_5); if (unlikely(!__pyx_t_1)) { if (PyErr_Occurred()) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 929; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 930; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } break; } @@ -45558,18 +45553,18 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_20get_next_states(struc __pyx_v_alt = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":930 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":931 * curr_col = _columns[curr[0]] * for alt in curr_col: * next_id = curr[0]+alt[2] # <<<<<<<<<<<<<< * jump = 1 * if (alt[0] == EPSILON): */ - __pyx_t_1 = __Pyx_GetItemInt(__pyx_v_curr, 0, sizeof(long), PyInt_FromLong); if (!__pyx_t_1) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 930; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_GetItemInt(__pyx_v_curr, 0, sizeof(long), PyInt_FromLong); if (!__pyx_t_1) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 931; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_2 = __Pyx_GetItemInt(__pyx_v_alt, 2, sizeof(long), PyInt_FromLong); if (!__pyx_t_2) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 930; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = __Pyx_GetItemInt(__pyx_v_alt, 2, sizeof(long), PyInt_FromLong); if (!__pyx_t_2) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 931; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_10 = PyNumber_Add(__pyx_t_1, __pyx_t_2); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 930; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyNumber_Add(__pyx_t_1, __pyx_t_2); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 931; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; @@ -45577,7 +45572,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_20get_next_states(struc __pyx_v_next_id = __pyx_t_10; __pyx_t_10 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":931 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":932 * for alt in curr_col: * next_id = curr[0]+alt[2] * jump = 1 # <<<<<<<<<<<<<< @@ -45588,25 +45583,25 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_20get_next_states(struc __Pyx_XDECREF(__pyx_v_jump); __pyx_v_jump = __pyx_int_1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":932 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":933 * next_id = curr[0]+alt[2] * jump = 1 * if (alt[0] == EPSILON): # <<<<<<<<<<<<<< * jump = 0 * if next_id not in result and min_dist <= curr[1]+jump <= self.max_initial_size+1: */ - __pyx_t_10 = __Pyx_GetItemInt(__pyx_v_alt, 0, sizeof(long), PyInt_FromLong); if (!__pyx_t_10) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 932; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = __Pyx_GetItemInt(__pyx_v_alt, 0, sizeof(long), PyInt_FromLong); if (!__pyx_t_10) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 933; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); - __pyx_t_2 = PyInt_FromLong(__pyx_v_3_sa_EPSILON); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 932; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyInt_FromLong(__pyx_v_3_sa_EPSILON); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 933; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_1 = PyObject_RichCompare(__pyx_t_10, __pyx_t_2, Py_EQ); __Pyx_XGOTREF(__pyx_t_1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 932; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_RichCompare(__pyx_t_10, __pyx_t_2, Py_EQ); __Pyx_XGOTREF(__pyx_t_1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 933; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - __pyx_t_7 = __Pyx_PyObject_IsTrue(__pyx_t_1); if (unlikely(__pyx_t_7 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 932; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = __Pyx_PyObject_IsTrue(__pyx_t_1); if (unlikely(__pyx_t_7 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 933; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":933 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":934 * jump = 1 * if (alt[0] == EPSILON): * jump = 0 # <<<<<<<<<<<<<< @@ -45620,30 +45615,30 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_20get_next_states(struc } __pyx_L9:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":934 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":935 * if (alt[0] == EPSILON): * jump = 0 * if next_id not in result and min_dist <= curr[1]+jump <= self.max_initial_size+1: # <<<<<<<<<<<<<< * candidate.append([next_id,curr[1]+jump]) * return sorted(result); */ - __pyx_t_7 = (__Pyx_PySequence_Contains(__pyx_v_next_id, ((PyObject *)__pyx_v_result), Py_NE)); if (unlikely(__pyx_t_7 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 934; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = (__Pyx_PySequence_Contains(__pyx_v_next_id, ((PyObject *)__pyx_v_result), Py_NE)); if (unlikely(__pyx_t_7 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 935; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_7) { - __pyx_t_1 = __Pyx_GetItemInt(__pyx_v_curr, 1, sizeof(long), PyInt_FromLong); if (!__pyx_t_1) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 934; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_GetItemInt(__pyx_v_curr, 1, sizeof(long), PyInt_FromLong); if (!__pyx_t_1) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 935; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_2 = PyNumber_Add(__pyx_t_1, __pyx_v_jump); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 934; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyNumber_Add(__pyx_t_1, __pyx_v_jump); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 935; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - __pyx_t_1 = PyObject_RichCompare(__pyx_v_min_dist, __pyx_t_2, Py_LE); __Pyx_XGOTREF(__pyx_t_1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 934; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_RichCompare(__pyx_v_min_dist, __pyx_t_2, Py_LE); __Pyx_XGOTREF(__pyx_t_1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 935; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__Pyx_PyObject_IsTrue(__pyx_t_1)) { __Pyx_DECREF(__pyx_t_1); - __pyx_t_10 = PyInt_FromLong((__pyx_v_self->max_initial_size + 1)); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 934; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyInt_FromLong((__pyx_v_self->max_initial_size + 1)); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 935; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); - __pyx_t_1 = PyObject_RichCompare(__pyx_t_2, __pyx_t_10, Py_LE); __Pyx_XGOTREF(__pyx_t_1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 934; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_RichCompare(__pyx_t_2, __pyx_t_10, Py_LE); __Pyx_XGOTREF(__pyx_t_1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 935; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; } __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - __pyx_t_4 = __Pyx_PyObject_IsTrue(__pyx_t_1); if (unlikely(__pyx_t_4 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 934; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = __Pyx_PyObject_IsTrue(__pyx_t_1); if (unlikely(__pyx_t_4 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 935; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_t_6 = __pyx_t_4; } else { @@ -45651,19 +45646,19 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_20get_next_states(struc } if (__pyx_t_6) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":935 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":936 * jump = 0 * if next_id not in result and min_dist <= curr[1]+jump <= self.max_initial_size+1: * candidate.append([next_id,curr[1]+jump]) # <<<<<<<<<<<<<< * return sorted(result); * */ - __pyx_t_1 = __Pyx_GetItemInt(__pyx_v_curr, 1, sizeof(long), PyInt_FromLong); if (!__pyx_t_1) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 935; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_GetItemInt(__pyx_v_curr, 1, sizeof(long), PyInt_FromLong); if (!__pyx_t_1) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 936; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_2 = PyNumber_Add(__pyx_t_1, __pyx_v_jump); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 935; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyNumber_Add(__pyx_t_1, __pyx_v_jump); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 936; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - __pyx_t_1 = PyList_New(2); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 935; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyList_New(2); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 936; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_INCREF(__pyx_v_next_id); PyList_SET_ITEM(__pyx_t_1, 0, __pyx_v_next_id); @@ -45671,7 +45666,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_20get_next_states(struc PyList_SET_ITEM(__pyx_t_1, 1, __pyx_t_2); __Pyx_GIVEREF(__pyx_t_2); __pyx_t_2 = 0; - __pyx_t_8 = PyList_Append(__pyx_v_candidate, ((PyObject *)__pyx_t_1)); if (unlikely(__pyx_t_8 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 935; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_8 = PyList_Append(__pyx_v_candidate, ((PyObject *)__pyx_t_1)); if (unlikely(__pyx_t_8 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 936; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; goto __pyx_L10; } @@ -45681,7 +45676,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_20get_next_states(struc __pyx_L3_continue:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":936 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":937 * if next_id not in result and min_dist <= curr[1]+jump <= self.max_initial_size+1: * candidate.append([next_id,curr[1]+jump]) * return sorted(result); # <<<<<<<<<<<<<< @@ -45689,12 +45684,12 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_20get_next_states(struc * def input(self, fwords, meta): */ __Pyx_XDECREF(__pyx_r); - __pyx_t_5 = PyTuple_New(1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 936; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyTuple_New(1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 937; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_INCREF(((PyObject *)__pyx_v_result)); PyTuple_SET_ITEM(__pyx_t_5, 0, ((PyObject *)__pyx_v_result)); __Pyx_GIVEREF(((PyObject *)__pyx_v_result)); - __pyx_t_1 = PyObject_Call(__pyx_builtin_sorted, ((PyObject *)__pyx_t_5), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 936; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_Call(__pyx_builtin_sorted, ((PyObject *)__pyx_t_5), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 937; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(((PyObject *)__pyx_t_5)); __pyx_t_5 = 0; __pyx_r = __pyx_t_1; @@ -45753,11 +45748,11 @@ static PyObject *__pyx_pw_3_sa_23HieroCachingRuleFactory_23input(PyObject *__pyx case 1: if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__meta)) != 0)) kw_args--; 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- Py_ssize_t __pyx_t_22; + int __pyx_t_20; + PyObject *(*__pyx_t_21)(PyObject *); + float __pyx_t_22; Py_ssize_t __pyx_t_23; Py_ssize_t __pyx_t_24; Py_ssize_t __pyx_t_25; - int __pyx_t_26; + Py_ssize_t __pyx_t_26; int __pyx_t_27; + int __pyx_t_28; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("None", 0); switch (__pyx_generator->resume_label) { @@ -46038,19 +46034,19 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene return NULL; } __pyx_L3_first_run:; - if (unlikely(!__pyx_sent_value)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 938; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__pyx_sent_value)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 939; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":949 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":950 * cdef Phrase hiero_phrase * * flen = len(fwords) # <<<<<<<<<<<<<< * start_time = monitor_cpu() * self.extract_time = 0.0 */ - __pyx_t_1 = PyObject_Length(__pyx_cur_scope->__pyx_v_fwords); if (unlikely(__pyx_t_1 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 949; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_Length(__pyx_cur_scope->__pyx_v_fwords); if (unlikely(__pyx_t_1 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 950; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_cur_scope->__pyx_v_flen = __pyx_t_1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":950 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":951 * * flen = len(fwords) * start_time = monitor_cpu() # <<<<<<<<<<<<<< @@ -46059,7 +46055,7 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene */ __pyx_cur_scope->__pyx_v_start_time = __pyx_f_3_sa_monitor_cpu(); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":951 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":952 * flen = len(fwords) * start_time = monitor_cpu() * self.extract_time = 0.0 # <<<<<<<<<<<<<< @@ -46068,20 +46064,20 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene */ __pyx_cur_scope->__pyx_v_self->extract_time = 0.0; 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if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 957; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyDict_New(); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 958; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_2)); - __pyx_t_3 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_PhraseLocation)), ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 957; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_PhraseLocation)), ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 958; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - if (PyDict_SetItem(__pyx_t_2, ((PyObject *)__pyx_n_s__phrase_location), __pyx_t_3) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 957; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_2, ((PyObject *)__pyx_n_s__phrase_location), __pyx_t_3) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 958; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - __pyx_t_3 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_ExtendedTrieNode)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_2)); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 957; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_ExtendedTrieNode)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_2)); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 958; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; __Pyx_GIVEREF(__pyx_t_3); @@ -46125,116 +46121,126 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene __pyx_cur_scope->__pyx_v_self->rules->root = __pyx_t_3; 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- __pyx_t_15 = 0; + __Pyx_GIVEREF(__pyx_t_16); + __pyx_cur_scope->__pyx_v_node = __pyx_t_16; + __pyx_t_16 = 0; } __pyx_L28:; goto __pyx_L27; } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1009 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1010 * node = node.children[word_id] * else: * if node.suffix_link is None: # <<<<<<<<<<<<<< * # Current node is root; lookup required * lookup_required = True */ - __pyx_t_15 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__suffix_link); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1009; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_GOTREF(__pyx_t_15); - __pyx_t_8 = (__pyx_t_15 == Py_None); - __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; + __pyx_t_16 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__suffix_link); if (unlikely(!__pyx_t_16)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1010; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_GOTREF(__pyx_t_16); 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if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1014; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_GOTREF(__pyx_t_15); + __pyx_t_16 = PyObject_GetAttr(__pyx_t_3, __pyx_n_s__children); if (unlikely(!__pyx_t_16)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1015; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_GOTREF(__pyx_t_16); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - __pyx_t_3 = PyObject_GetItem(__pyx_t_15, __pyx_cur_scope->__pyx_v_word_id); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1014; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_GetItem(__pyx_t_16, __pyx_cur_scope->__pyx_v_word_id); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1015; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; + __Pyx_DECREF(__pyx_t_16); __pyx_t_16 = 0; __pyx_t_8 = (__pyx_t_3 == Py_None); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; if (__pyx_t_8) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1016 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1017 * if node.suffix_link.children[word_id] is None: * # Suffix link reports path is dead end * node.children[word_id] = None # <<<<<<<<<<<<<< * continue * else: */ - __pyx_t_3 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__children); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1016; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__children); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1017; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - if (PyObject_SetItem(__pyx_t_3, __pyx_cur_scope->__pyx_v_word_id, Py_None) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1016; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyObject_SetItem(__pyx_t_3, __pyx_cur_scope->__pyx_v_word_id, Py_None) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1017; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1017 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1018 * # Suffix link reports path is dead end * node.children[word_id] = None * continue # <<<<<<<<<<<<<< @@ -47010,7 +47037,7 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1020 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1021 * else: * # Suffix link indicates lookup is reqired * lookup_required = True # <<<<<<<<<<<<<< @@ -47024,18 +47051,18 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1023 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1024 * else: * #ERROR: We never get here * raise Exception("Keyword trie error") # <<<<<<<<<<<<<< * # checking whether lookup_required * if lookup_required: */ - __pyx_t_3 = PyObject_Call(__pyx_builtin_Exception, ((PyObject *)__pyx_k_tuple_122), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1023; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_Call(__pyx_builtin_Exception, ((PyObject *)__pyx_k_tuple_122), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1024; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_Raise(__pyx_t_3, 0, 0, 0); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1023; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1024; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_L30:; } @@ -47043,7 +47070,7 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene } __pyx_L27:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1025 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1026 * raise Exception("Keyword trie error") * # checking whether lookup_required * if lookup_required: # <<<<<<<<<<<<<< @@ -47052,7 +47079,7 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene */ if (__pyx_cur_scope->__pyx_v_lookup_required) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1026 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1027 * # checking whether lookup_required * if lookup_required: * new_node = None # <<<<<<<<<<<<<< @@ -47065,66 +47092,66 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene __Pyx_GIVEREF(Py_None); 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if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1030; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyDict_New(); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1031; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_3)); - __pyx_t_15 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__suffix_link); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1030; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_GOTREF(__pyx_t_15); - __pyx_t_2 = PyObject_GetAttr(__pyx_t_15, __pyx_n_s__children); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1030; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_16 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__suffix_link); if (unlikely(!__pyx_t_16)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1031; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_GOTREF(__pyx_t_16); + __pyx_t_2 = PyObject_GetAttr(__pyx_t_16, __pyx_n_s__children); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1031; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; - __pyx_t_15 = PyObject_GetItem(__pyx_t_2, __pyx_cur_scope->__pyx_v_word_id); if (!__pyx_t_15) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1030; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_GOTREF(__pyx_t_15); + __Pyx_DECREF(__pyx_t_16); __pyx_t_16 = 0; + __pyx_t_16 = PyObject_GetItem(__pyx_t_2, __pyx_cur_scope->__pyx_v_word_id); if (!__pyx_t_16) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1031; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_GOTREF(__pyx_t_16); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - __pyx_t_2 = PyObject_GetAttr(__pyx_t_15, __pyx_n_s__phrase_location); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1030; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_GetAttr(__pyx_t_16, __pyx_n_s__phrase_location); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1031; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; - if (PyDict_SetItem(__pyx_t_3, ((PyObject *)__pyx_n_s__phrase_location), __pyx_t_2) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1030; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_DECREF(__pyx_t_16); __pyx_t_16 = 0; + if (PyDict_SetItem(__pyx_t_3, ((PyObject *)__pyx_n_s__phrase_location), __pyx_t_2) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1031; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1031 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1032 * # on the shadow path we don't do any search, we just use info from suffix link * new_node = ExtendedTrieNode(phrase_location=node.suffix_link.children[word_id].phrase_location, * suffix_link=node.suffix_link.children[word_id], # <<<<<<<<<<<<<< * phrase=hiero_phrase) * else: */ - __pyx_t_2 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__suffix_link); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1031; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__suffix_link); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1032; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_15 = PyObject_GetAttr(__pyx_t_2, __pyx_n_s__children); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1031; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_GOTREF(__pyx_t_15); + __pyx_t_16 = PyObject_GetAttr(__pyx_t_2, __pyx_n_s__children); if (unlikely(!__pyx_t_16)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1032; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_GOTREF(__pyx_t_16); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - __pyx_t_2 = PyObject_GetItem(__pyx_t_15, __pyx_cur_scope->__pyx_v_word_id); if (!__pyx_t_2) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1031; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_GetItem(__pyx_t_16, __pyx_cur_scope->__pyx_v_word_id); if (!__pyx_t_2) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1032; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; - if (PyDict_SetItem(__pyx_t_3, ((PyObject *)__pyx_n_s__suffix_link), __pyx_t_2) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1030; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_DECREF(__pyx_t_16); __pyx_t_16 = 0; + if (PyDict_SetItem(__pyx_t_3, ((PyObject *)__pyx_n_s__suffix_link), __pyx_t_2) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1031; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1032 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1033 * new_node = ExtendedTrieNode(phrase_location=node.suffix_link.children[word_id].phrase_location, * suffix_link=node.suffix_link.children[word_id], * phrase=hiero_phrase) # <<<<<<<<<<<<<< * else: * if arity > 0: */ - if (PyDict_SetItem(__pyx_t_3, ((PyObject *)__pyx_n_s__phrase), ((PyObject *)__pyx_cur_scope->__pyx_v_hiero_phrase)) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1030; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_2 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_ExtendedTrieNode)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_3)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1030; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_3, ((PyObject *)__pyx_n_s__phrase), ((PyObject *)__pyx_cur_scope->__pyx_v_hiero_phrase)) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1031; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_ExtendedTrieNode)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_3)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1031; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(((PyObject *)__pyx_t_3)); __pyx_t_3 = 0; __Pyx_GOTREF(__pyx_cur_scope->__pyx_v_new_node); @@ -47136,7 +47163,7 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1034 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1035 * phrase=hiero_phrase) * else: * if arity > 0: # <<<<<<<<<<<<<< @@ -47146,22 +47173,22 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene __pyx_t_8 = (__pyx_cur_scope->__pyx_v_arity > 0); if (__pyx_t_8) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1036 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1037 * if arity > 0: * # Intersecting because of arity > 0 * phrase_location = self.intersect(node, node.suffix_link.children[word_id], hiero_phrase) # <<<<<<<<<<<<<< * else: * # Suffix array search */ - __pyx_t_2 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__suffix_link); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1036; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__suffix_link); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1037; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_3 = PyObject_GetAttr(__pyx_t_2, __pyx_n_s__children); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1036; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_GetAttr(__pyx_t_2, __pyx_n_s__children); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1037; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - __pyx_t_2 = PyObject_GetItem(__pyx_t_3, __pyx_cur_scope->__pyx_v_word_id); if (!__pyx_t_2) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1036; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_GetItem(__pyx_t_3, __pyx_cur_scope->__pyx_v_word_id); if (!__pyx_t_2) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1037; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - __pyx_t_3 = ((PyObject *)((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_cur_scope->__pyx_v_self->__pyx_vtab)->intersect(__pyx_cur_scope->__pyx_v_self, __pyx_cur_scope->__pyx_v_node, __pyx_t_2, __pyx_cur_scope->__pyx_v_hiero_phrase)); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1036; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = ((PyObject *)((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_cur_scope->__pyx_v_self->__pyx_vtab)->intersect(__pyx_cur_scope->__pyx_v_self, __pyx_cur_scope->__pyx_v_node, __pyx_t_2, __pyx_cur_scope->__pyx_v_hiero_phrase)); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1037; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_XGOTREF(((PyObject *)__pyx_cur_scope->__pyx_v_phrase_location)); @@ -47173,69 +47200,69 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1039 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1040 * else: * # Suffix array search * phrase_location = node.phrase_location # <<<<<<<<<<<<<< * sa_range = self.fsa.lookup(sym_tostring(phrase[-1]), len(phrase)-1, phrase_location.sa_low, phrase_location.sa_high) * if sa_range is not None: */ - __pyx_t_3 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__phrase_location); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1039; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__phrase_location); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1040; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_ptype_3_sa_PhraseLocation))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1039; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_ptype_3_sa_PhraseLocation))))) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1040; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_XGOTREF(((PyObject *)__pyx_cur_scope->__pyx_v_phrase_location)); __Pyx_XDECREF(((PyObject *)__pyx_cur_scope->__pyx_v_phrase_location)); __Pyx_GIVEREF(__pyx_t_3); __pyx_cur_scope->__pyx_v_phrase_location = ((struct __pyx_obj_3_sa_PhraseLocation *)__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1040 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1041 * # Suffix array search * phrase_location = node.phrase_location * sa_range = self.fsa.lookup(sym_tostring(phrase[-1]), len(phrase)-1, phrase_location.sa_low, phrase_location.sa_high) # <<<<<<<<<<<<<< * if sa_range is not None: * phrase_location = PhraseLocation(sa_low=sa_range[0], sa_high=sa_range[1]) */ - __pyx_t_3 = PyObject_GetAttr(((PyObject *)__pyx_cur_scope->__pyx_v_self->fsa), __pyx_n_s__lookup); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1040; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_GetAttr(((PyObject *)__pyx_cur_scope->__pyx_v_self->fsa), __pyx_n_s__lookup); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1041; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __pyx_t_2 = __Pyx_GetItemInt(__pyx_cur_scope->__pyx_v_phrase, -1, sizeof(long), PyInt_FromLong); if (!__pyx_t_2) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1040; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = __Pyx_GetItemInt(__pyx_cur_scope->__pyx_v_phrase, -1, sizeof(long), PyInt_FromLong); if (!__pyx_t_2) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1041; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_18 = __Pyx_PyInt_AsInt(__pyx_t_2); if (unlikely((__pyx_t_18 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1040; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_19 = __Pyx_PyInt_AsInt(__pyx_t_2); if (unlikely((__pyx_t_19 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1041; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - __pyx_t_2 = PyBytes_FromString(__pyx_f_3_sa_sym_tostring(__pyx_t_18)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1040; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyBytes_FromString(__pyx_f_3_sa_sym_tostring(__pyx_t_19)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1041; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_2)); - __pyx_t_5 = PyObject_Length(__pyx_cur_scope->__pyx_v_phrase); if (unlikely(__pyx_t_5 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1040; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_15 = PyInt_FromSsize_t((__pyx_t_5 - 1)); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1040; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_Length(__pyx_cur_scope->__pyx_v_phrase); if (unlikely(__pyx_t_5 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1041; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_16 = PyInt_FromSsize_t((__pyx_t_5 - 1)); if (unlikely(!__pyx_t_16)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1041; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_GOTREF(__pyx_t_16); + __pyx_t_15 = PyInt_FromLong(__pyx_cur_scope->__pyx_v_phrase_location->sa_low); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1041; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); - __pyx_t_14 = PyInt_FromLong(__pyx_cur_scope->__pyx_v_phrase_location->sa_low); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1040; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_GOTREF(__pyx_t_14); - __pyx_t_10 = PyInt_FromLong(__pyx_cur_scope->__pyx_v_phrase_location->sa_high); 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- PyTuple_SET_ITEM(__pyx_t_9, 2, __pyx_t_14); - __Pyx_GIVEREF(__pyx_t_14); - PyTuple_SET_ITEM(__pyx_t_9, 3, __pyx_t_10); - __Pyx_GIVEREF(__pyx_t_10); + PyTuple_SET_ITEM(__pyx_t_9, 3, __pyx_t_11); + __Pyx_GIVEREF(__pyx_t_11); __pyx_t_2 = 0; + __pyx_t_16 = 0; __pyx_t_15 = 0; - __pyx_t_14 = 0; - __pyx_t_10 = 0; - __pyx_t_10 = PyObject_Call(__pyx_t_3, ((PyObject *)__pyx_t_9), NULL); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1040; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_GOTREF(__pyx_t_10); + __pyx_t_11 = 0; + __pyx_t_11 = PyObject_Call(__pyx_t_3, ((PyObject *)__pyx_t_9), NULL); if (unlikely(!__pyx_t_11)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1041; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_GOTREF(__pyx_t_11); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_9)); __pyx_t_9 = 0; __Pyx_XGOTREF(__pyx_cur_scope->__pyx_v_sa_range); __Pyx_XDECREF(__pyx_cur_scope->__pyx_v_sa_range); - __Pyx_GIVEREF(__pyx_t_10); - __pyx_cur_scope->__pyx_v_sa_range = __pyx_t_10; - __pyx_t_10 = 0; + __Pyx_GIVEREF(__pyx_t_11); + __pyx_cur_scope->__pyx_v_sa_range = __pyx_t_11; + __pyx_t_11 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1041 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1042 * phrase_location = node.phrase_location * sa_range = self.fsa.lookup(sym_tostring(phrase[-1]), len(phrase)-1, phrase_location.sa_low, phrase_location.sa_high) * if sa_range is not None: # <<<<<<<<<<<<<< @@ -47245,26 +47272,26 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene __pyx_t_8 = (__pyx_cur_scope->__pyx_v_sa_range != Py_None); if (__pyx_t_8) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1042 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1043 * sa_range = self.fsa.lookup(sym_tostring(phrase[-1]), len(phrase)-1, phrase_location.sa_low, phrase_location.sa_high) * if sa_range is not None: * phrase_location = PhraseLocation(sa_low=sa_range[0], sa_high=sa_range[1]) # <<<<<<<<<<<<<< * else: * phrase_location = None */ - __pyx_t_10 = PyDict_New(); 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if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1042; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_PhraseLocation)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_11)); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1043; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_9); - __Pyx_DECREF(((PyObject *)__pyx_t_10)); __pyx_t_10 = 0; + __Pyx_DECREF(((PyObject *)__pyx_t_11)); __pyx_t_11 = 0; __Pyx_GOTREF(((PyObject *)__pyx_cur_scope->__pyx_v_phrase_location)); __Pyx_DECREF(((PyObject *)__pyx_cur_scope->__pyx_v_phrase_location)); __Pyx_GIVEREF(__pyx_t_9); @@ -47274,7 +47301,7 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1044 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1045 * phrase_location = PhraseLocation(sa_low=sa_range[0], sa_high=sa_range[1]) * else: * phrase_location = None # <<<<<<<<<<<<<< @@ -47291,7 +47318,7 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene } __pyx_L34:; 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__pyx_cur_scope->__pyx_v_suffix_link = __pyx_cur_scope->__pyx_v_self->rules->root; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1052 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1053 * # Search succeeded * suffix_link = self.rules.root * if node.suffix_link is not None: # <<<<<<<<<<<<<< * suffix_link = node.suffix_link.children[word_id] * new_node = ExtendedTrieNode(phrase_location=phrase_location, */ - __pyx_t_9 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__suffix_link); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1052; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__suffix_link); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1053; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_9); __pyx_t_8 = (__pyx_t_9 != Py_None); __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; if (__pyx_t_8) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1053 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1054 * suffix_link = self.rules.root * if node.suffix_link is not None: * suffix_link = node.suffix_link.children[word_id] # <<<<<<<<<<<<<< * new_node = ExtendedTrieNode(phrase_location=phrase_location, * suffix_link=suffix_link, */ - __pyx_t_9 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__suffix_link); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1053; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__suffix_link); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1054; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_9); - __pyx_t_10 = PyObject_GetAttr(__pyx_t_9, __pyx_n_s__children); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1053; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_GOTREF(__pyx_t_10); + __pyx_t_11 = PyObject_GetAttr(__pyx_t_9, __pyx_n_s__children); if (unlikely(!__pyx_t_11)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1054; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_GOTREF(__pyx_t_11); __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; - __pyx_t_9 = PyObject_GetItem(__pyx_t_10, __pyx_cur_scope->__pyx_v_word_id); if (!__pyx_t_9) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1053; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PyObject_GetItem(__pyx_t_11, __pyx_cur_scope->__pyx_v_word_id); if (!__pyx_t_9) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1054; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_9); - __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; + __Pyx_DECREF(__pyx_t_11); __pyx_t_11 = 0; __Pyx_GOTREF(__pyx_cur_scope->__pyx_v_suffix_link); __Pyx_DECREF(__pyx_cur_scope->__pyx_v_suffix_link); __Pyx_GIVEREF(__pyx_t_9); @@ -47375,58 +47402,58 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene } __pyx_L37:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1054 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1055 * if node.suffix_link is not None: * suffix_link = node.suffix_link.children[word_id] * new_node = ExtendedTrieNode(phrase_location=phrase_location, # <<<<<<<<<<<<<< * suffix_link=suffix_link, * phrase=hiero_phrase) */ - __pyx_t_9 = PyDict_New(); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1054; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PyDict_New(); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1055; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_9)); - if (PyDict_SetItem(__pyx_t_9, ((PyObject *)__pyx_n_s__phrase_location), ((PyObject *)__pyx_cur_scope->__pyx_v_phrase_location)) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1054; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_9, ((PyObject *)__pyx_n_s__phrase_location), ((PyObject *)__pyx_cur_scope->__pyx_v_phrase_location)) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1055; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1055 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1056 * suffix_link = node.suffix_link.children[word_id] * new_node = ExtendedTrieNode(phrase_location=phrase_location, * suffix_link=suffix_link, # <<<<<<<<<<<<<< * phrase=hiero_phrase) * node.children[word_id] = new_node */ - if (PyDict_SetItem(__pyx_t_9, ((PyObject *)__pyx_n_s__suffix_link), __pyx_cur_scope->__pyx_v_suffix_link) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1054; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_t_9, ((PyObject *)__pyx_n_s__suffix_link), __pyx_cur_scope->__pyx_v_suffix_link) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1055; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1056 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1057 * new_node = ExtendedTrieNode(phrase_location=phrase_location, * suffix_link=suffix_link, * phrase=hiero_phrase) # <<<<<<<<<<<<<< * node.children[word_id] = new_node * node = new_node */ - if (PyDict_SetItem(__pyx_t_9, ((PyObject *)__pyx_n_s__phrase), ((PyObject *)__pyx_cur_scope->__pyx_v_hiero_phrase)) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1054; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_10 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_ExtendedTrieNode)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_9)); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1054; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_GOTREF(__pyx_t_10); + if (PyDict_SetItem(__pyx_t_9, ((PyObject *)__pyx_n_s__phrase), ((PyObject *)__pyx_cur_scope->__pyx_v_hiero_phrase)) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1055; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_11 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_ExtendedTrieNode)), ((PyObject *)__pyx_empty_tuple), ((PyObject *)__pyx_t_9)); if (unlikely(!__pyx_t_11)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1055; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_GOTREF(__pyx_t_11); __Pyx_DECREF(((PyObject *)__pyx_t_9)); __pyx_t_9 = 0; __Pyx_GOTREF(__pyx_cur_scope->__pyx_v_new_node); __Pyx_DECREF(__pyx_cur_scope->__pyx_v_new_node); - __Pyx_GIVEREF(__pyx_t_10); - __pyx_cur_scope->__pyx_v_new_node = __pyx_t_10; - __pyx_t_10 = 0; + __Pyx_GIVEREF(__pyx_t_11); + __pyx_cur_scope->__pyx_v_new_node = __pyx_t_11; + __pyx_t_11 = 0; } __pyx_L33:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1057 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1058 * suffix_link=suffix_link, * phrase=hiero_phrase) * node.children[word_id] = new_node # <<<<<<<<<<<<<< * node = new_node * */ - __pyx_t_10 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_node, __pyx_n_s__children); 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__pyx_lineno = 1064; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_GOTREF(__pyx_t_10); + __pyx_t_11 = PyInt_FromLong((__pyx_cur_scope->__pyx_v_arity + 1)); if (unlikely(!__pyx_t_11)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1065; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_GOTREF(__pyx_t_11); __Pyx_XGOTREF(__pyx_cur_scope->__pyx_v_xcat_index); __Pyx_XDECREF(__pyx_cur_scope->__pyx_v_xcat_index); - __Pyx_GIVEREF(__pyx_t_10); - __pyx_cur_scope->__pyx_v_xcat_index = __pyx_t_10; - __pyx_t_10 = 0; + __Pyx_GIVEREF(__pyx_t_11); + __pyx_cur_scope->__pyx_v_xcat_index = __pyx_t_11; + __pyx_t_11 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1065 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1066 * if arity < self.max_nonterminals: * xcat_index = arity+1 * xcat = sym_setindex(self.category, xcat_index) # <<<<<<<<<<<<<< * suffix_link_xcat_index = xcat_index * if is_shadow_path: */ - __pyx_t_18 = __Pyx_PyInt_AsInt(__pyx_cur_scope->__pyx_v_xcat_index); 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if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1071; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_GetAttr(__pyx_t_9, __pyx_n_s__children); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1072; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; - __pyx_t_9 = __Pyx_GetItemInt(__pyx_t_3, __pyx_cur_scope->__pyx_v_suffix_link_xcat, sizeof(int), PyInt_FromLong); if (!__pyx_t_9) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1071; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = __Pyx_GetItemInt(__pyx_t_3, __pyx_cur_scope->__pyx_v_suffix_link_xcat, sizeof(int), PyInt_FromLong); if (!__pyx_t_9) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1072; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_9); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - if (PyDict_SetItem(__pyx_t_10, ((PyObject *)__pyx_n_s__suffix_link), __pyx_t_9) < 0) {__pyx_filename = __pyx_f[8]; 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__pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1079 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1080 * num_subpatterns = (<PhraseLocation> node.phrase_location).num_subpatterns * chunklen = IntList(initial_len=num_subpatterns) * for j from 0 <= j < num_subpatterns: # <<<<<<<<<<<<<< * chunklen.arr[j] = hiero_phrase.chunklen(j) * extracts = [] */ - __pyx_t_18 = __pyx_cur_scope->__pyx_v_num_subpatterns; - for (__pyx_cur_scope->__pyx_v_j = 0; __pyx_cur_scope->__pyx_v_j < __pyx_t_18; __pyx_cur_scope->__pyx_v_j++) { + __pyx_t_19 = __pyx_cur_scope->__pyx_v_num_subpatterns; + for (__pyx_cur_scope->__pyx_v_j = 0; __pyx_cur_scope->__pyx_v_j < __pyx_t_19; __pyx_cur_scope->__pyx_v_j++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1080 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1081 * chunklen = IntList(initial_len=num_subpatterns) * for j from 0 <= j < num_subpatterns: * chunklen.arr[j] = hiero_phrase.chunklen(j) # <<<<<<<<<<<<<< @@ -47696,14 +47723,14 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene (__pyx_cur_scope->__pyx_v_chunklen->arr[__pyx_cur_scope->__pyx_v_j]) = ((struct __pyx_vtabstruct_3_sa_Phrase *)__pyx_cur_scope->__pyx_v_hiero_phrase->__pyx_vtab)->chunklen(__pyx_cur_scope->__pyx_v_hiero_phrase, __pyx_cur_scope->__pyx_v_j); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1081 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1082 * for j from 0 <= j < num_subpatterns: * chunklen.arr[j] = hiero_phrase.chunklen(j) * extracts = [] # <<<<<<<<<<<<<< * j = 0 * extract_start = monitor_cpu() */ - __pyx_t_3 = PyList_New(0); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1081; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyList_New(0); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1082; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_XGOTREF(((PyObject *)__pyx_cur_scope->__pyx_v_extracts)); __Pyx_XDECREF(((PyObject *)__pyx_cur_scope->__pyx_v_extracts)); @@ -47711,7 +47738,7 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene __pyx_cur_scope->__pyx_v_extracts = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1082 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1083 * chunklen.arr[j] = hiero_phrase.chunklen(j) * extracts = [] * j = 0 # <<<<<<<<<<<<<< @@ -47720,14 +47747,14 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene */ __pyx_cur_scope->__pyx_v_j = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1083 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1084 * extracts = [] * j = 0 * extract_start = monitor_cpu() # <<<<<<<<<<<<<< * while j < sample.len: * extract = [] */ - __pyx_t_3 = PyFloat_FromDouble(__pyx_f_3_sa_monitor_cpu()); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1083; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyFloat_FromDouble(__pyx_f_3_sa_monitor_cpu()); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1084; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_XGOTREF(__pyx_cur_scope->__pyx_v_extract_start); __Pyx_XDECREF(__pyx_cur_scope->__pyx_v_extract_start); @@ -47735,7 +47762,7 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene __pyx_cur_scope->__pyx_v_extract_start = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1084 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1085 * j = 0 * extract_start = monitor_cpu() * while j < sample.len: # <<<<<<<<<<<<<< @@ -47743,17 +47770,17 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene * */ while (1) { - __pyx_t_19 = (__pyx_cur_scope->__pyx_v_j < __pyx_cur_scope->__pyx_v_sample->len); 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if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1088; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_Call(((PyObject *)((PyObject*)(&PyTuple_Type))), ((PyObject *)__pyx_t_11), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1089; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __Pyx_DECREF(((PyObject *)__pyx_t_10)); __pyx_t_10 = 0; + __Pyx_DECREF(((PyObject *)__pyx_t_11)); __pyx_t_11 = 0; __Pyx_XGOTREF(__pyx_cur_scope->__pyx_v_loc); __Pyx_XDECREF(__pyx_cur_scope->__pyx_v_loc); __Pyx_GIVEREF(__pyx_t_3); __pyx_cur_scope->__pyx_v_loc = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1089 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1090 * assign_matching(&matching, sample.arr, j, num_subpatterns, self.fda.sent_id.arr) * loc = tuple(sample[j:j+num_subpatterns]) * extract = self.extract(hiero_phrase, &matching, chunklen.arr, num_subpatterns) # <<<<<<<<<<<<<< * extracts.extend([(e, loc) for e in extract]) * j = j + num_subpatterns */ - __pyx_t_3 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_cur_scope->__pyx_v_self->__pyx_vtab)->extract(__pyx_cur_scope->__pyx_v_self, __pyx_cur_scope->__pyx_v_hiero_phrase, (&__pyx_cur_scope->__pyx_v_matching), __pyx_cur_scope->__pyx_v_chunklen->arr, __pyx_cur_scope->__pyx_v_num_subpatterns); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1089; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_cur_scope->__pyx_v_self->__pyx_vtab)->extract(__pyx_cur_scope->__pyx_v_self, __pyx_cur_scope->__pyx_v_hiero_phrase, (&__pyx_cur_scope->__pyx_v_matching), __pyx_cur_scope->__pyx_v_chunklen->arr, __pyx_cur_scope->__pyx_v_num_subpatterns); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1090; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_GOTREF(__pyx_cur_scope->__pyx_v_extract); __Pyx_DECREF(__pyx_cur_scope->__pyx_v_extract); @@ -47808,81 +47835,81 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene __pyx_cur_scope->__pyx_v_extract = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1090 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1091 * loc = tuple(sample[j:j+num_subpatterns]) * extract = self.extract(hiero_phrase, &matching, chunklen.arr, num_subpatterns) * extracts.extend([(e, loc) for e in extract]) # <<<<<<<<<<<<<< * j = j + num_subpatterns * */ - __pyx_t_3 = PyObject_GetAttr(((PyObject *)__pyx_cur_scope->__pyx_v_extracts), __pyx_n_s__extend); 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+ __pyx_t_16 = PyTuple_GET_ITEM(sequence, 0); __pyx_t_2 = PyTuple_GET_ITEM(sequence, 1); - __pyx_t_7 = PyTuple_GET_ITEM(sequence, 2); - __pyx_t_13 = PyTuple_GET_ITEM(sequence, 3); + __pyx_t_10 = PyTuple_GET_ITEM(sequence, 2); + __pyx_t_7 = PyTuple_GET_ITEM(sequence, 3); } else { - __pyx_t_15 = PyList_GET_ITEM(sequence, 0); + __pyx_t_16 = PyList_GET_ITEM(sequence, 0); __pyx_t_2 = PyList_GET_ITEM(sequence, 1); - __pyx_t_7 = PyList_GET_ITEM(sequence, 2); - __pyx_t_13 = PyList_GET_ITEM(sequence, 3); + __pyx_t_10 = PyList_GET_ITEM(sequence, 2); + __pyx_t_7 = PyList_GET_ITEM(sequence, 3); } - __Pyx_INCREF(__pyx_t_15); + __Pyx_INCREF(__pyx_t_16); __Pyx_INCREF(__pyx_t_2); + __Pyx_INCREF(__pyx_t_10); __Pyx_INCREF(__pyx_t_7); - __Pyx_INCREF(__pyx_t_13); #else Py_ssize_t i; - PyObject** temps[4] = {&__pyx_t_15,&__pyx_t_2,&__pyx_t_7,&__pyx_t_13}; + PyObject** temps[4] = {&__pyx_t_16,&__pyx_t_2,&__pyx_t_10,&__pyx_t_7}; for (i=0; i < 4; i++) { - PyObject* item = PySequence_ITEM(sequence, i); if (unlikely(!item)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1099; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyObject* item = PySequence_ITEM(sequence, i); if (unlikely(!item)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1100; __pyx_clineno = __LINE__; goto __pyx_L1_error;} *(temps[i]) = item; } #endif @@ -48102,32 +48129,32 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene } else { Py_ssize_t index = -1; - PyObject** temps[4] = {&__pyx_t_15,&__pyx_t_2,&__pyx_t_7,&__pyx_t_13}; - __pyx_t_16 = PyObject_GetIter(__pyx_t_9); if (unlikely(!__pyx_t_16)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1099; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_GOTREF(__pyx_t_16); + PyObject** temps[4] = {&__pyx_t_16,&__pyx_t_2,&__pyx_t_10,&__pyx_t_7}; + __pyx_t_14 = PyObject_GetIter(__pyx_t_9); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1100; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_GOTREF(__pyx_t_14); __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; - __pyx_t_17 = Py_TYPE(__pyx_t_16)->tp_iternext; + __pyx_t_18 = Py_TYPE(__pyx_t_14)->tp_iternext; for (index=0; index < 4; index++) { - PyObject* item = __pyx_t_17(__pyx_t_16); if (unlikely(!item)) goto __pyx_L52_unpacking_failed; + PyObject* item = __pyx_t_18(__pyx_t_14); if (unlikely(!item)) goto __pyx_L52_unpacking_failed; __Pyx_GOTREF(item); *(temps[index]) = item; } - if (__Pyx_IternextUnpackEndCheck(__pyx_t_17(__pyx_t_16), 4) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1099; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_17 = NULL; - __Pyx_DECREF(__pyx_t_16); __pyx_t_16 = 0; + if (__Pyx_IternextUnpackEndCheck(__pyx_t_18(__pyx_t_14), 4) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1100; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_18 = NULL; + __Pyx_DECREF(__pyx_t_14); __pyx_t_14 = 0; goto __pyx_L53_unpacking_done; __pyx_L52_unpacking_failed:; - __Pyx_DECREF(__pyx_t_16); __pyx_t_16 = 0; - __pyx_t_17 = NULL; + __Pyx_DECREF(__pyx_t_14); __pyx_t_14 = 0; + __pyx_t_18 = NULL; if (__Pyx_IterFinish() == 0) __Pyx_RaiseNeedMoreValuesError(index); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1099; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1100; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_L53_unpacking_done:; } __Pyx_XGOTREF(__pyx_cur_scope->__pyx_v_f); __Pyx_XDECREF(__pyx_cur_scope->__pyx_v_f); - __Pyx_GIVEREF(__pyx_t_15); - __pyx_cur_scope->__pyx_v_f = __pyx_t_15; - __pyx_t_15 = 0; + __Pyx_GIVEREF(__pyx_t_16); + __pyx_cur_scope->__pyx_v_f = __pyx_t_16; + __pyx_t_16 = 0; __Pyx_XGOTREF(__pyx_cur_scope->__pyx_v_e); __Pyx_XDECREF(__pyx_cur_scope->__pyx_v_e); __Pyx_GIVEREF(__pyx_t_2); @@ -48135,21 +48162,21 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene __pyx_t_2 = 0; __Pyx_XGOTREF(__pyx_cur_scope->__pyx_v_count); __Pyx_XDECREF(__pyx_cur_scope->__pyx_v_count); - __Pyx_GIVEREF(__pyx_t_7); - __pyx_cur_scope->__pyx_v_count = __pyx_t_7; - __pyx_t_7 = 0; + __Pyx_GIVEREF(__pyx_t_10); + __pyx_cur_scope->__pyx_v_count = __pyx_t_10; + __pyx_t_10 = 0; __Pyx_XGOTREF(__pyx_cur_scope->__pyx_v_als); __Pyx_XDECREF(__pyx_cur_scope->__pyx_v_als); - __Pyx_GIVEREF(__pyx_t_13); - __pyx_cur_scope->__pyx_v_als = __pyx_t_13; - __pyx_t_13 = 0; + __Pyx_GIVEREF(__pyx_t_7); + __pyx_cur_scope->__pyx_v_als = __pyx_t_7; + __pyx_t_7 = 0; __Pyx_XGOTREF(__pyx_cur_scope->__pyx_v_loc); __Pyx_XDECREF(__pyx_cur_scope->__pyx_v_loc); - __Pyx_GIVEREF(__pyx_t_14); - __pyx_cur_scope->__pyx_v_loc = __pyx_t_14; - __pyx_t_14 = 0; + __Pyx_GIVEREF(__pyx_t_15); + __pyx_cur_scope->__pyx_v_loc = __pyx_t_15; + __pyx_t_15 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1100 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1101 * fphrases = defaultdict(lambda: defaultdict(lambda: defaultdict(list))) * for (f, e, count, als), loc in extracts: * fcount[f] += count # <<<<<<<<<<<<<< @@ -48158,38 +48185,38 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene */ __Pyx_INCREF(__pyx_cur_scope->__pyx_v_f); __pyx_t_3 = __pyx_cur_scope->__pyx_v_f; 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__pyx_lineno = 1100; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; + if (PyObject_SetItem(__pyx_cur_scope->__pyx_v_fcount, __pyx_t_3, __pyx_t_9) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1101; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1101 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1102 * for (f, e, count, als), loc in extracts: * fcount[f] += count * fphrases[f][e][als].append(loc) # <<<<<<<<<<<<<< * for f, elist in fphrases.iteritems(): * for e, alslist in elist.iteritems(): */ - __pyx_t_3 = PyObject_GetItem(__pyx_cur_scope->__pyx_v_fphrases, __pyx_cur_scope->__pyx_v_f); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1101; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_GetItem(__pyx_cur_scope->__pyx_v_fphrases, __pyx_cur_scope->__pyx_v_f); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1102; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __pyx_t_9 = PyObject_GetItem(__pyx_t_3, __pyx_cur_scope->__pyx_v_e); if (!__pyx_t_9) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1101; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PyObject_GetItem(__pyx_t_3, __pyx_cur_scope->__pyx_v_e); if (!__pyx_t_9) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1102; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_9); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - __pyx_t_3 = PyObject_GetItem(__pyx_t_9, __pyx_cur_scope->__pyx_v_als); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1101; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_GetItem(__pyx_t_9, __pyx_cur_scope->__pyx_v_als); if (!__pyx_t_3) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1102; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_9); 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- {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1102; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1103; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } - __pyx_t_9 = __Pyx_dict_iterator(__pyx_cur_scope->__pyx_v_fphrases, 0, ((PyObject *)__pyx_n_s__iteritems), (&__pyx_t_22), (&__pyx_t_18)); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1102; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = __Pyx_dict_iterator(__pyx_cur_scope->__pyx_v_fphrases, 0, ((PyObject *)__pyx_n_s__iteritems), (&__pyx_t_23), (&__pyx_t_19)); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1103; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_9); - __Pyx_XDECREF(__pyx_t_10); - __pyx_t_10 = __pyx_t_9; + __Pyx_XDECREF(__pyx_t_11); + __pyx_t_11 = __pyx_t_9; __pyx_t_9 = 0; while (1) { - __pyx_t_6 = __Pyx_dict_iter_next(__pyx_t_10, __pyx_t_22, &__pyx_t_5, &__pyx_t_9, &__pyx_t_3, NULL, __pyx_t_18); + __pyx_t_6 = __Pyx_dict_iter_next(__pyx_t_11, __pyx_t_23, &__pyx_t_5, &__pyx_t_9, &__pyx_t_3, NULL, __pyx_t_19); if (unlikely(__pyx_t_6 == 0)) break; - if (unlikely(__pyx_t_6 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1102; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__pyx_t_6 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1103; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_9); __Pyx_GOTREF(__pyx_t_3); __Pyx_XGOTREF(__pyx_cur_scope->__pyx_v_f); @@ -48223,29 +48250,29 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene __pyx_cur_scope->__pyx_v_elist = __pyx_t_3; __pyx_t_3 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1103 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1104 * fphrases[f][e][als].append(loc) * for f, elist in fphrases.iteritems(): * for e, alslist in elist.iteritems(): # <<<<<<<<<<<<<< * alignment, max_locs = max(alslist.iteritems(), key=lambda x: len(x[1])) * locs = tuple(itertools.chain.from_iterable(alslist.itervalues())) */ - __pyx_t_23 = 0; 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+ __pyx_t_4 = __Pyx_dict_iter_next(__pyx_t_3, __pyx_t_25, &__pyx_t_24, &__pyx_t_9, &__pyx_t_15, NULL, __pyx_t_6); if (unlikely(__pyx_t_4 == 0)) break; - if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1103; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1104; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_9); - __Pyx_GOTREF(__pyx_t_14); + __Pyx_GOTREF(__pyx_t_15); __Pyx_XGOTREF(__pyx_cur_scope->__pyx_v_e); __Pyx_XDECREF(__pyx_cur_scope->__pyx_v_e); __Pyx_GIVEREF(__pyx_t_9); @@ -48253,39 +48280,39 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene __pyx_t_9 = 0; __Pyx_XGOTREF(__pyx_cur_scope->__pyx_v_alslist); __Pyx_XDECREF(__pyx_cur_scope->__pyx_v_alslist); - __Pyx_GIVEREF(__pyx_t_14); - __pyx_cur_scope->__pyx_v_alslist = __pyx_t_14; - __pyx_t_14 = 0; + __Pyx_GIVEREF(__pyx_t_15); + __pyx_cur_scope->__pyx_v_alslist = __pyx_t_15; 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goto __pyx_L1_error;} + __Pyx_GOTREF(__pyx_t_7); + __pyx_t_15 = PyObject_GetAttr(__pyx_t_7, __pyx_n_s__chain); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1106; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_GOTREF(__pyx_t_15); + __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; + __pyx_t_7 = PyObject_GetAttr(__pyx_t_15, __pyx_n_s__from_iterable); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1106; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_GOTREF(__pyx_t_7); + __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; + __pyx_t_15 = PyObject_GetAttr(__pyx_cur_scope->__pyx_v_alslist, __pyx_n_s__itervalues); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1106; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_GOTREF(__pyx_t_15); + __pyx_t_9 = PyObject_Call(__pyx_t_15, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1106; __pyx_clineno = __LINE__; 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if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1124; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PyList_New(0); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1126; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_9); __Pyx_XGOTREF(__pyx_cur_scope->__pyx_v_frontier_nodes); __Pyx_XDECREF(__pyx_cur_scope->__pyx_v_frontier_nodes); @@ -48823,24 +48856,24 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator4(__pyx_Gene __pyx_cur_scope->__pyx_v_frontier_nodes = ((PyObject *)__pyx_t_9); __pyx_t_9 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1125 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1127 * key = tuple([self.min_gap_size, i, 1, pathlen]) * frontier_nodes = [] * if (key in nodes_isteps_away_buffer): # <<<<<<<<<<<<<< * frontier_nodes = nodes_isteps_away_buffer[key] * else: */ - __pyx_t_8 = (__Pyx_PyDict_Contains(((PyObject *)__pyx_cur_scope->__pyx_v_key), ((PyObject *)__pyx_cur_scope->__pyx_v_nodes_isteps_away_buffer), Py_EQ)); if (unlikely(__pyx_t_8 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1125; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_8 = (__Pyx_PyDict_Contains(((PyObject *)__pyx_cur_scope->__pyx_v_key), ((PyObject *)__pyx_cur_scope->__pyx_v_nodes_isteps_away_buffer), Py_EQ)); if (unlikely(__pyx_t_8 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1127; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__pyx_t_8) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1126 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1128 * frontier_nodes = [] * if (key in nodes_isteps_away_buffer): * frontier_nodes = nodes_isteps_away_buffer[key] # <<<<<<<<<<<<<< * else: * frontier_nodes = self.get_all_nodes_isteps_away(self.min_gap_size, i, 1, pathlen, fwords, next_states, reachable_buffer) */ - __pyx_t_9 = __Pyx_PyDict_GetItem(((PyObject *)__pyx_cur_scope->__pyx_v_nodes_isteps_away_buffer), ((PyObject *)__pyx_cur_scope->__pyx_v_key)); if (!__pyx_t_9) {__pyx_filename = __pyx_f[8]; 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__Pyx_INCREF(__pyx_t_2); __pyx_t_22 = 0; - __pyx_t_20 = NULL; + __pyx_t_2 = __pyx_cur_scope->__pyx_v_frontier_nodes; __Pyx_INCREF(__pyx_t_2); __pyx_t_23 = 0; + __pyx_t_21 = NULL; } else { - __pyx_t_22 = -1; __pyx_t_2 = PyObject_GetIter(__pyx_cur_scope->__pyx_v_frontier_nodes); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1131; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_23 = -1; __pyx_t_2 = PyObject_GetIter(__pyx_cur_scope->__pyx_v_frontier_nodes); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1133; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_20 = Py_TYPE(__pyx_t_2)->tp_iternext; + __pyx_t_21 = Py_TYPE(__pyx_t_2)->tp_iternext; } for (;;) { - if (!__pyx_t_20 && PyList_CheckExact(__pyx_t_2)) { - if (__pyx_t_22 >= PyList_GET_SIZE(__pyx_t_2)) break; + if (!__pyx_t_21 && PyList_CheckExact(__pyx_t_2)) { + if (__pyx_t_23 >= PyList_GET_SIZE(__pyx_t_2)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_15 = PyList_GET_ITEM(__pyx_t_2, __pyx_t_22); 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if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1176 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1178 * elif e_in_high != -1 and e_high[0] != e_in_high: * if e_high[0] - e_in_high < min_ex_size: * e_high[0] = e_in_high + min_ex_size # <<<<<<<<<<<<<< @@ -49403,7 +49450,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj */ (__pyx_v_e_high[0]) = (__pyx_v_e_in_high + __pyx_v_min_ex_size); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1177 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1179 * if e_high[0] - e_in_high < min_ex_size: * e_high[0] = e_in_high + min_ex_size * if e_high[0] > e_sent_len: # <<<<<<<<<<<<<< @@ -49413,7 +49460,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj __pyx_t_4 = ((__pyx_v_e_high[0]) > __pyx_v_e_sent_len); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1178 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1180 * e_high[0] = e_in_high + min_ex_size * if e_high[0] > e_sent_len: * return 0 # <<<<<<<<<<<<<< @@ -49432,7 +49479,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } __pyx_L6:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1180 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1182 * return 0 * * f_back_low[0] = -1 # <<<<<<<<<<<<<< @@ -49441,7 +49488,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj */ (__pyx_v_f_back_low[0]) = -1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1181 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1183 * * f_back_low[0] = -1 * f_back_high[0] = -1 # <<<<<<<<<<<<<< @@ -49450,7 +49497,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj */ (__pyx_v_f_back_high[0]) = -1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1182 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1184 * f_back_low[0] = -1 * f_back_high[0] = -1 * f_low_prev = f_low # <<<<<<<<<<<<<< @@ -49459,17 +49506,17 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj */ __pyx_v_f_low_prev = __pyx_v_f_low; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1183 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1185 * f_back_high[0] = -1 * f_low_prev = f_low * f_high_prev = f_high # <<<<<<<<<<<<<< * new_x = 0 * new_low_x = 0 */ - __pyx_t_1 = __Pyx_PyInt_AsInt(__pyx_v_f_high); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1183; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyInt_AsInt(__pyx_v_f_high); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1185; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_f_high_prev = __pyx_t_1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1184 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1186 * f_low_prev = f_low * f_high_prev = f_high * new_x = 0 # <<<<<<<<<<<<<< @@ -49478,7 +49525,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj */ __pyx_v_new_x = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1185 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1187 * f_high_prev = f_high * new_x = 0 * new_low_x = 0 # <<<<<<<<<<<<<< @@ -49487,7 +49534,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj */ __pyx_v_new_low_x = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1186 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1188 * new_x = 0 * new_low_x = 0 * new_high_x = 0 # <<<<<<<<<<<<<< @@ -49496,7 +49543,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj */ __pyx_v_new_high_x = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1188 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1190 * new_high_x = 0 * * while True: # <<<<<<<<<<<<<< @@ -49506,7 +49553,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj while (1) { if (!1) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1190 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1192 * while True: * * if f_back_low[0] == -1: # <<<<<<<<<<<<<< @@ -49516,45 +49563,45 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj __pyx_t_4 = ((__pyx_v_f_back_low[0]) == -1); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1191 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1193 * * if f_back_low[0] == -1: * self.find_projection(e_low[0], e_high[0], e_links_low, e_links_high, f_back_low, f_back_high) # <<<<<<<<<<<<<< * else: * self.find_projection(e_low[0], e_low_prev, e_links_low, e_links_high, f_back_low, f_back_high) */ - __pyx_t_2 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->find_projection(__pyx_v_self, (__pyx_v_e_low[0]), (__pyx_v_e_high[0]), __pyx_v_e_links_low, __pyx_v_e_links_high, __pyx_v_f_back_low, __pyx_v_f_back_high); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1191; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->find_projection(__pyx_v_self, (__pyx_v_e_low[0]), (__pyx_v_e_high[0]), __pyx_v_e_links_low, __pyx_v_e_links_high, __pyx_v_f_back_low, __pyx_v_f_back_high); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1193; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; goto __pyx_L11; } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1193 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1195 * self.find_projection(e_low[0], e_high[0], e_links_low, e_links_high, f_back_low, f_back_high) * else: * self.find_projection(e_low[0], e_low_prev, e_links_low, e_links_high, f_back_low, f_back_high) # <<<<<<<<<<<<<< * self.find_projection(e_high_prev, e_high[0], e_links_low, e_links_high, f_back_low, f_back_high) * */ - __pyx_t_2 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->find_projection(__pyx_v_self, (__pyx_v_e_low[0]), __pyx_v_e_low_prev, __pyx_v_e_links_low, __pyx_v_e_links_high, __pyx_v_f_back_low, __pyx_v_f_back_high); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1193; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->find_projection(__pyx_v_self, (__pyx_v_e_low[0]), __pyx_v_e_low_prev, __pyx_v_e_links_low, __pyx_v_e_links_high, __pyx_v_f_back_low, __pyx_v_f_back_high); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1195; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1194 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1196 * else: * self.find_projection(e_low[0], e_low_prev, e_links_low, e_links_high, f_back_low, f_back_high) * self.find_projection(e_high_prev, e_high[0], e_links_low, e_links_high, f_back_low, f_back_high) # <<<<<<<<<<<<<< * * if f_back_low[0] > f_low: */ - __pyx_t_2 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->find_projection(__pyx_v_self, __pyx_v_e_high_prev, (__pyx_v_e_high[0]), __pyx_v_e_links_low, __pyx_v_e_links_high, __pyx_v_f_back_low, __pyx_v_f_back_high); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1194; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->find_projection(__pyx_v_self, __pyx_v_e_high_prev, (__pyx_v_e_high[0]), __pyx_v_e_links_low, __pyx_v_e_links_high, __pyx_v_f_back_low, __pyx_v_f_back_high); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1196; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; } __pyx_L11:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1196 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1198 * self.find_projection(e_high_prev, e_high[0], e_links_low, e_links_high, f_back_low, f_back_high) * * if f_back_low[0] > f_low: # <<<<<<<<<<<<<< @@ -49564,7 +49611,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj __pyx_t_4 = ((__pyx_v_f_back_low[0]) > __pyx_v_f_low); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1197 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1199 * * if f_back_low[0] > f_low: * f_back_low[0] = f_low # <<<<<<<<<<<<<< @@ -49576,35 +49623,35 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } __pyx_L12:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1199 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1201 * f_back_low[0] = f_low * * if f_back_high[0] < f_high: # <<<<<<<<<<<<<< * f_back_high[0] = f_high * */ - __pyx_t_2 = PyInt_FromLong((__pyx_v_f_back_high[0])); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1199; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyInt_FromLong((__pyx_v_f_back_high[0])); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1201; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_6 = PyObject_RichCompare(__pyx_t_2, __pyx_v_f_high, Py_LT); __Pyx_XGOTREF(__pyx_t_6); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1199; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyObject_RichCompare(__pyx_t_2, __pyx_v_f_high, Py_LT); __Pyx_XGOTREF(__pyx_t_6); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1201; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - __pyx_t_4 = __Pyx_PyObject_IsTrue(__pyx_t_6); if (unlikely(__pyx_t_4 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1199; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = __Pyx_PyObject_IsTrue(__pyx_t_6); if (unlikely(__pyx_t_4 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1201; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1200 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1202 * * if f_back_high[0] < f_high: * f_back_high[0] = f_high # <<<<<<<<<<<<<< * * if f_back_low[0] == f_low_prev and f_back_high[0] == f_high_prev: */ - __pyx_t_1 = __Pyx_PyInt_AsInt(__pyx_v_f_high); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1200; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyInt_AsInt(__pyx_v_f_high); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1202; __pyx_clineno = __LINE__; goto __pyx_L1_error;} (__pyx_v_f_back_high[0]) = __pyx_t_1; goto __pyx_L13; } __pyx_L13:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1202 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1204 * f_back_high[0] = f_high * * if f_back_low[0] == f_low_prev and f_back_high[0] == f_high_prev: # <<<<<<<<<<<<<< @@ -49620,7 +49667,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1203 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1205 * * if f_back_low[0] == f_low_prev and f_back_high[0] == f_high_prev: * return 1 # <<<<<<<<<<<<<< @@ -49633,7 +49680,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } __pyx_L14:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1205 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1207 * return 1 * * if allow_low_x == 0 and f_back_low[0] < f_low: # <<<<<<<<<<<<<< @@ -49649,7 +49696,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1207 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1209 * if allow_low_x == 0 and f_back_low[0] < f_low: * # FAIL: f phrase is not tight * return 0 # <<<<<<<<<<<<<< @@ -49662,7 +49709,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } __pyx_L15:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1209 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1211 * return 0 * * if f_back_high[0] - f_back_low[0] > max_f_len: # <<<<<<<<<<<<<< @@ -49672,7 +49719,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj __pyx_t_5 = (((__pyx_v_f_back_high[0]) - (__pyx_v_f_back_low[0])) > __pyx_v_max_f_len); if (__pyx_t_5) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1211 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1213 * if f_back_high[0] - f_back_low[0] > max_f_len: * # FAIL: f back projection is too wide * return 0 # <<<<<<<<<<<<<< @@ -49685,7 +49732,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } __pyx_L16:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1213 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1215 * return 0 * * if allow_high_x == 0 and f_back_high[0] > f_high: # <<<<<<<<<<<<<< @@ -49694,11 +49741,11 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj */ __pyx_t_5 = (__pyx_v_allow_high_x == 0); if (__pyx_t_5) { - __pyx_t_6 = PyInt_FromLong((__pyx_v_f_back_high[0])); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1213; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyInt_FromLong((__pyx_v_f_back_high[0])); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1215; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_2 = PyObject_RichCompare(__pyx_t_6, __pyx_v_f_high, Py_GT); __Pyx_XGOTREF(__pyx_t_2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1213; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_RichCompare(__pyx_t_6, __pyx_v_f_high, Py_GT); __Pyx_XGOTREF(__pyx_t_2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1215; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - __pyx_t_3 = __Pyx_PyObject_IsTrue(__pyx_t_2); if (unlikely(__pyx_t_3 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1213; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __Pyx_PyObject_IsTrue(__pyx_t_2); if (unlikely(__pyx_t_3 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1215; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __pyx_t_4 = __pyx_t_3; } else { @@ -49706,7 +49753,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1215 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1217 * if allow_high_x == 0 and f_back_high[0] > f_high: * # FAIL: extension on high side not allowed * return 0 # <<<<<<<<<<<<<< @@ -49719,7 +49766,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } __pyx_L17:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1217 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1219 * return 0 * * if f_low != f_back_low[0]: # <<<<<<<<<<<<<< @@ -49729,7 +49776,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj __pyx_t_4 = (__pyx_v_f_low != (__pyx_v_f_back_low[0])); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1218 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1220 * * if f_low != f_back_low[0]: * if new_low_x == 0: # <<<<<<<<<<<<<< @@ -49739,7 +49786,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj __pyx_t_4 = (__pyx_v_new_low_x == 0); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1219 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1221 * if f_low != f_back_low[0]: * if new_low_x == 0: * if new_x >= max_new_x: # <<<<<<<<<<<<<< @@ -49749,7 +49796,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj __pyx_t_4 = (__pyx_v_new_x >= __pyx_v_max_new_x); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1221 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1223 * if new_x >= max_new_x: * # FAIL: extension required on low side violates max # of gaps * return 0 # <<<<<<<<<<<<<< @@ -49762,7 +49809,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1223 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1225 * return 0 * else: * new_x = new_x + 1 # <<<<<<<<<<<<<< @@ -49771,7 +49818,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj */ __pyx_v_new_x = (__pyx_v_new_x + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1224 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1226 * else: * new_x = new_x + 1 * new_low_x = 1 # <<<<<<<<<<<<<< @@ -49785,7 +49832,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } __pyx_L19:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1225 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1227 * new_x = new_x + 1 * new_low_x = 1 * if f_low - f_back_low[0] < min_fx_size: # <<<<<<<<<<<<<< @@ -49795,7 +49842,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj __pyx_t_4 = ((__pyx_v_f_low - (__pyx_v_f_back_low[0])) < __pyx_v_min_fx_size); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1226 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1228 * new_low_x = 1 * if f_low - f_back_low[0] < min_fx_size: * f_back_low[0] = f_low - min_fx_size # <<<<<<<<<<<<<< @@ -49804,7 +49851,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj */ (__pyx_v_f_back_low[0]) = (__pyx_v_f_low - __pyx_v_min_fx_size); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1227 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1229 * if f_low - f_back_low[0] < min_fx_size: * f_back_low[0] = f_low - min_fx_size * if f_back_high[0] - f_back_low[0] > max_f_len: # <<<<<<<<<<<<<< @@ -49814,7 +49861,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj __pyx_t_4 = (((__pyx_v_f_back_high[0]) - (__pyx_v_f_back_low[0])) > __pyx_v_max_f_len); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1229 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1231 * if f_back_high[0] - f_back_low[0] > max_f_len: * # FAIL: extension required on low side violates max initial length * return 0 # <<<<<<<<<<<<<< @@ -49827,7 +49874,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } __pyx_L22:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1230 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1232 * # FAIL: extension required on low side violates max initial length * return 0 * if f_back_low[0] < 0: # <<<<<<<<<<<<<< @@ -49837,7 +49884,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj __pyx_t_4 = ((__pyx_v_f_back_low[0]) < 0); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1232 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1234 * if f_back_low[0] < 0: * # FAIL: extension required on low side violates sentence boundary * return 0 # <<<<<<<<<<<<<< @@ -49856,22 +49903,22 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } __pyx_L18:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1234 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1236 * return 0 * * if f_high != f_back_high[0]: # <<<<<<<<<<<<<< * if new_high_x == 0: * if new_x >= max_new_x: */ - __pyx_t_2 = PyInt_FromLong((__pyx_v_f_back_high[0])); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1234; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyInt_FromLong((__pyx_v_f_back_high[0])); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1236; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_6 = PyObject_RichCompare(__pyx_v_f_high, __pyx_t_2, Py_NE); __Pyx_XGOTREF(__pyx_t_6); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1234; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyObject_RichCompare(__pyx_v_f_high, __pyx_t_2, Py_NE); __Pyx_XGOTREF(__pyx_t_6); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1236; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - __pyx_t_4 = __Pyx_PyObject_IsTrue(__pyx_t_6); if (unlikely(__pyx_t_4 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1234; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = __Pyx_PyObject_IsTrue(__pyx_t_6); if (unlikely(__pyx_t_4 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1236; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1235 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1237 * * if f_high != f_back_high[0]: * if new_high_x == 0: # <<<<<<<<<<<<<< @@ -49881,7 +49928,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj __pyx_t_4 = (__pyx_v_new_high_x == 0); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1236 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1238 * if f_high != f_back_high[0]: * if new_high_x == 0: * if new_x >= max_new_x: # <<<<<<<<<<<<<< @@ -49891,7 +49938,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj __pyx_t_4 = (__pyx_v_new_x >= __pyx_v_max_new_x); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1238 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1240 * if new_x >= max_new_x: * # FAIL: extension required on high side violates max # of gaps * return 0 # <<<<<<<<<<<<<< @@ -49904,7 +49951,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1240 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1242 * return 0 * else: * new_x = new_x + 1 # <<<<<<<<<<<<<< @@ -49913,7 +49960,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj */ __pyx_v_new_x = (__pyx_v_new_x + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1241 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1243 * else: * new_x = new_x + 1 * new_high_x = 1 # <<<<<<<<<<<<<< @@ -49927,44 +49974,44 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } __pyx_L25:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1242 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1244 * new_x = new_x + 1 * new_high_x = 1 * if f_back_high[0] - f_high < min_fx_size: # <<<<<<<<<<<<<< * f_back_high[0] = f_high + min_fx_size * if f_back_high[0] - f_back_low[0] > max_f_len: */ - __pyx_t_6 = PyInt_FromLong((__pyx_v_f_back_high[0])); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1242; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyInt_FromLong((__pyx_v_f_back_high[0])); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1244; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_2 = PyNumber_Subtract(__pyx_t_6, __pyx_v_f_high); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1242; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyNumber_Subtract(__pyx_t_6, __pyx_v_f_high); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1244; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - __pyx_t_6 = PyInt_FromLong(__pyx_v_min_fx_size); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1242; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyInt_FromLong(__pyx_v_min_fx_size); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1244; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_7 = PyObject_RichCompare(__pyx_t_2, __pyx_t_6, Py_LT); __Pyx_XGOTREF(__pyx_t_7); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1242; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyObject_RichCompare(__pyx_t_2, __pyx_t_6, Py_LT); __Pyx_XGOTREF(__pyx_t_7); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1244; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - __pyx_t_4 = __Pyx_PyObject_IsTrue(__pyx_t_7); if (unlikely(__pyx_t_4 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1242; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = __Pyx_PyObject_IsTrue(__pyx_t_7); if (unlikely(__pyx_t_4 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1244; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1243 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1245 * new_high_x = 1 * if f_back_high[0] - f_high < min_fx_size: * f_back_high[0] = f_high + min_fx_size # <<<<<<<<<<<<<< * if f_back_high[0] - f_back_low[0] > max_f_len: * # FAIL: extension required on high side violates max initial length */ - __pyx_t_7 = PyInt_FromLong(__pyx_v_min_fx_size); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1243; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyInt_FromLong(__pyx_v_min_fx_size); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1245; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); - __pyx_t_6 = PyNumber_Add(__pyx_v_f_high, __pyx_t_7); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1243; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyNumber_Add(__pyx_v_f_high, __pyx_t_7); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1245; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; - __pyx_t_1 = __Pyx_PyInt_AsInt(__pyx_t_6); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1243; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyInt_AsInt(__pyx_t_6); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1245; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; (__pyx_v_f_back_high[0]) = __pyx_t_1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1244 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1246 * if f_back_high[0] - f_high < min_fx_size: * f_back_high[0] = f_high + min_fx_size * if f_back_high[0] - f_back_low[0] > max_f_len: # <<<<<<<<<<<<<< @@ -49974,7 +50021,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj __pyx_t_4 = (((__pyx_v_f_back_high[0]) - (__pyx_v_f_back_low[0])) > __pyx_v_max_f_len); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1246 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1248 * if f_back_high[0] - f_back_low[0] > max_f_len: * # FAIL: extension required on high side violates max initial length * return 0 # <<<<<<<<<<<<<< @@ -49987,7 +50034,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } __pyx_L28:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1247 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1249 * # FAIL: extension required on high side violates max initial length * return 0 * if f_back_high[0] > f_sent_len: # <<<<<<<<<<<<<< @@ -49997,7 +50044,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj __pyx_t_4 = ((__pyx_v_f_back_high[0]) > __pyx_v_f_sent_len); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1249 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1251 * if f_back_high[0] > f_sent_len: * # FAIL: extension required on high side violates sentence boundary * return 0 # <<<<<<<<<<<<<< @@ -50016,7 +50063,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } __pyx_L24:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1251 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1253 * return 0 * * e_low_prev = e_low[0] # <<<<<<<<<<<<<< @@ -50025,7 +50072,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj */ __pyx_v_e_low_prev = (__pyx_v_e_low[0]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1252 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1254 * * e_low_prev = e_low[0] * e_high_prev = e_high[0] # <<<<<<<<<<<<<< @@ -50034,29 +50081,29 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj */ __pyx_v_e_high_prev = (__pyx_v_e_high[0]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1254 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1256 * e_high_prev = e_high[0] * * self.find_projection(f_back_low[0], f_low_prev, f_links_low, f_links_high, e_low, e_high) # <<<<<<<<<<<<<< * self.find_projection(f_high_prev, f_back_high[0], f_links_low, f_links_high, e_low, e_high) * if e_low[0] == e_low_prev and e_high[0] == e_high_prev: */ - __pyx_t_6 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->find_projection(__pyx_v_self, (__pyx_v_f_back_low[0]), __pyx_v_f_low_prev, __pyx_v_f_links_low, __pyx_v_f_links_high, __pyx_v_e_low, __pyx_v_e_high); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1254; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->find_projection(__pyx_v_self, (__pyx_v_f_back_low[0]), __pyx_v_f_low_prev, __pyx_v_f_links_low, __pyx_v_f_links_high, __pyx_v_e_low, __pyx_v_e_high); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1256; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1255 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1257 * * self.find_projection(f_back_low[0], f_low_prev, f_links_low, f_links_high, e_low, e_high) * self.find_projection(f_high_prev, f_back_high[0], f_links_low, f_links_high, e_low, e_high) # <<<<<<<<<<<<<< * if e_low[0] == e_low_prev and e_high[0] == e_high_prev: * return 1 */ - __pyx_t_6 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->find_projection(__pyx_v_self, __pyx_v_f_high_prev, (__pyx_v_f_back_high[0]), __pyx_v_f_links_low, __pyx_v_f_links_high, __pyx_v_e_low, __pyx_v_e_high); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1255; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->find_projection(__pyx_v_self, __pyx_v_f_high_prev, (__pyx_v_f_back_high[0]), __pyx_v_f_links_low, __pyx_v_f_links_high, __pyx_v_e_low, __pyx_v_e_high); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1257; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1256 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1258 * self.find_projection(f_back_low[0], f_low_prev, f_links_low, f_links_high, e_low, e_high) * self.find_projection(f_high_prev, f_back_high[0], f_links_low, f_links_high, e_low, e_high) * if e_low[0] == e_low_prev and e_high[0] == e_high_prev: # <<<<<<<<<<<<<< @@ -50072,7 +50119,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1257 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1259 * self.find_projection(f_high_prev, f_back_high[0], f_links_low, f_links_high, e_low, e_high) * if e_low[0] == e_low_prev and e_high[0] == e_high_prev: * return 1 # <<<<<<<<<<<<<< @@ -50085,7 +50132,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } __pyx_L30:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1258 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1260 * if e_low[0] == e_low_prev and e_high[0] == e_high_prev: * return 1 * if allow_arbitrary_x == 0: # <<<<<<<<<<<<<< @@ -50095,7 +50142,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj __pyx_t_3 = (__pyx_v_allow_arbitrary_x == 0); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1260 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1262 * if allow_arbitrary_x == 0: * # FAIL: arbitrary expansion not permitted * return 0 # <<<<<<<<<<<<<< @@ -50108,7 +50155,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } __pyx_L31:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1261 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1263 * # FAIL: arbitrary expansion not permitted * return 0 * if e_high[0] - e_low[0] > max_e_len: # <<<<<<<<<<<<<< @@ -50118,7 +50165,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj __pyx_t_3 = (((__pyx_v_e_high[0]) - (__pyx_v_e_low[0])) > __pyx_v_max_e_len); if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1263 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1265 * if e_high[0] - e_low[0] > max_e_len: * # FAIL: re-projection violates sentence max phrase length * return 0 # <<<<<<<<<<<<<< @@ -50131,7 +50178,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj } __pyx_L32:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1264 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1266 * # FAIL: re-projection violates sentence max phrase length * return 0 * f_low_prev = f_back_low[0] # <<<<<<<<<<<<<< @@ -50140,7 +50187,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj */ __pyx_v_f_low_prev = (__pyx_v_f_back_low[0]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1265 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1267 * return 0 * f_low_prev = f_back_low[0] * f_high_prev = f_back_high[0] # <<<<<<<<<<<<<< @@ -50163,7 +50210,7 @@ static int __pyx_f_3_sa_23HieroCachingRuleFactory_find_fixpoint(struct __pyx_obj return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1268 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1270 * * * cdef find_projection(self, int in_low, int in_high, int* in_links_low, int* in_links_high, # <<<<<<<<<<<<<< @@ -50181,7 +50228,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_find_projection(CYTHON_U int __pyx_t_4; __Pyx_RefNannySetupContext("find_projection", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1271 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1273 * int* out_low, int* out_high): * cdef int i * for i from in_low <= i < in_high: # <<<<<<<<<<<<<< @@ -50191,7 +50238,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_find_projection(CYTHON_U __pyx_t_1 = __pyx_v_in_high; for (__pyx_v_i = __pyx_v_in_low; __pyx_v_i < __pyx_t_1; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1272 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1274 * cdef int i * for i from in_low <= i < in_high: * if in_links_low[i] != -1: # <<<<<<<<<<<<<< @@ -50201,7 +50248,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_find_projection(CYTHON_U __pyx_t_2 = ((__pyx_v_in_links_low[__pyx_v_i]) != -1); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1273 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1275 * for i from in_low <= i < in_high: * if in_links_low[i] != -1: * if out_low[0] == -1 or in_links_low[i] < out_low[0]: # <<<<<<<<<<<<<< @@ -50217,7 +50264,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_find_projection(CYTHON_U } if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1274 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1276 * if in_links_low[i] != -1: * if out_low[0] == -1 or in_links_low[i] < out_low[0]: * out_low[0] = in_links_low[i] # <<<<<<<<<<<<<< @@ -50229,7 +50276,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_find_projection(CYTHON_U } __pyx_L6:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1275 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1277 * if out_low[0] == -1 or in_links_low[i] < out_low[0]: * out_low[0] = in_links_low[i] * if out_high[0] == -1 or in_links_high[i] > out_high[0]: # <<<<<<<<<<<<<< @@ -50245,7 +50292,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_find_projection(CYTHON_U } if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1276 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1278 * out_low[0] = in_links_low[i] * if out_high[0] == -1 or in_links_high[i] > out_high[0]: * out_high[0] = in_links_high[i] # <<<<<<<<<<<<<< @@ -50267,7 +50314,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_find_projection(CYTHON_U return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1279 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1281 * * * cdef int* int_arr_extend(self, int* arr, int* arr_len, int* data, int data_len): # <<<<<<<<<<<<<< @@ -50281,7 +50328,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_int_arr_extend(CYTHON_UNUSED __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("int_arr_extend", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1281 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1283 * cdef int* int_arr_extend(self, int* arr, int* arr_len, int* data, int data_len): * cdef int new_len * new_len = arr_len[0] + data_len # <<<<<<<<<<<<<< @@ -50290,7 +50337,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_int_arr_extend(CYTHON_UNUSED */ __pyx_v_new_len = ((__pyx_v_arr_len[0]) + __pyx_v_data_len); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1282 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1284 * cdef int new_len * new_len = arr_len[0] + data_len * arr = <int*> realloc(arr, new_len*sizeof(int)) # <<<<<<<<<<<<<< @@ -50299,7 +50346,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_int_arr_extend(CYTHON_UNUSED */ __pyx_v_arr = ((int *)realloc(__pyx_v_arr, (__pyx_v_new_len * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1283 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1285 * new_len = arr_len[0] + data_len * arr = <int*> realloc(arr, new_len*sizeof(int)) * memcpy(arr+arr_len[0], data, data_len*sizeof(int)) # <<<<<<<<<<<<<< @@ -50308,7 +50355,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_int_arr_extend(CYTHON_UNUSED */ memcpy((__pyx_v_arr + (__pyx_v_arr_len[0])), __pyx_v_data, (__pyx_v_data_len * (sizeof(int)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1284 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1286 * arr = <int*> realloc(arr, new_len*sizeof(int)) * memcpy(arr+arr_len[0], data, data_len*sizeof(int)) * arr_len[0] = new_len # <<<<<<<<<<<<<< @@ -50317,7 +50364,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_int_arr_extend(CYTHON_UNUSED */ (__pyx_v_arr_len[0]) = __pyx_v_new_len; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1285 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1287 * memcpy(arr+arr_len[0], data, data_len*sizeof(int)) * arr_len[0] = new_len * return arr # <<<<<<<<<<<<<< @@ -50333,7 +50380,7 @@ static int *__pyx_f_3_sa_23HieroCachingRuleFactory_int_arr_extend(CYTHON_UNUSED return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1288 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1290 * * * cdef extract_phrases(self, int e_low, int e_high, int* e_gap_low, int* e_gap_high, int* e_links_low, int num_gaps, # <<<<<<<<<<<<<< @@ -50379,19 +50426,19 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("extract_phrases", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1296 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1298 * cdef result * * result = [] # <<<<<<<<<<<<<< * len1 = 0 * e_gaps1 = <int*> malloc(0) */ - __pyx_t_1 = PyList_New(0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1296; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyList_New(0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1298; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_v_result = ((PyObject *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1297 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1299 * * result = [] * len1 = 0 # <<<<<<<<<<<<<< @@ -50400,7 +50447,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_len1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1298 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1300 * result = [] * len1 = 0 * e_gaps1 = <int*> malloc(0) # <<<<<<<<<<<<<< @@ -50409,19 +50456,19 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_e_gaps1 = ((int *)malloc(0)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1299 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1301 * len1 = 0 * e_gaps1 = <int*> malloc(0) * ephr_arr = IntList() # <<<<<<<<<<<<<< * * e_gap_order = <int*> malloc(num_gaps*sizeof(int)) */ - __pyx_t_1 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_IntList)), ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1299; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_IntList)), ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1301; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_v_ephr_arr = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1301 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1303 * ephr_arr = IntList() * * e_gap_order = <int*> malloc(num_gaps*sizeof(int)) # <<<<<<<<<<<<<< @@ -50430,7 +50477,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_e_gap_order = ((int *)malloc((__pyx_v_num_gaps * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1302 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1304 * * e_gap_order = <int*> malloc(num_gaps*sizeof(int)) * if num_gaps > 0: # <<<<<<<<<<<<<< @@ -50440,7 +50487,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_2 = (__pyx_v_num_gaps > 0); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1303 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1305 * e_gap_order = <int*> malloc(num_gaps*sizeof(int)) * if num_gaps > 0: * e_gap_order[0] = 0 # <<<<<<<<<<<<<< @@ -50449,7 +50496,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ (__pyx_v_e_gap_order[0]) = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1304 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1306 * if num_gaps > 0: * e_gap_order[0] = 0 * for i from 1 <= i < num_gaps: # <<<<<<<<<<<<<< @@ -50459,7 +50506,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_3 = __pyx_v_num_gaps; for (__pyx_v_i = 1; __pyx_v_i < __pyx_t_3; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1305 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1307 * e_gap_order[0] = 0 * for i from 1 <= i < num_gaps: * for j from 0 <= j < i: # <<<<<<<<<<<<<< @@ -50469,7 +50516,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_4 = __pyx_v_i; for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_4; __pyx_v_j++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1306 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1308 * for i from 1 <= i < num_gaps: * for j from 0 <= j < i: * if e_gap_low[i] < e_gap_low[j]: # <<<<<<<<<<<<<< @@ -50479,7 +50526,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_2 = ((__pyx_v_e_gap_low[__pyx_v_i]) < (__pyx_v_e_gap_low[__pyx_v_j])); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1307 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1309 * for j from 0 <= j < i: * if e_gap_low[i] < e_gap_low[j]: * for k from j <= k < i: # <<<<<<<<<<<<<< @@ -50489,7 +50536,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_5 = __pyx_v_i; for (__pyx_v_k = __pyx_v_j; __pyx_v_k < __pyx_t_5; __pyx_v_k++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1308 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1310 * if e_gap_low[i] < e_gap_low[j]: * for k from j <= k < i: * e_gap_order[k+1] = e_gap_order[k] # <<<<<<<<<<<<<< @@ -50499,7 +50546,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ (__pyx_v_e_gap_order[(__pyx_v_k + 1)]) = (__pyx_v_e_gap_order[__pyx_v_k]); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1309 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1311 * for k from j <= k < i: * e_gap_order[k+1] = e_gap_order[k] * e_gap_order[j] = i # <<<<<<<<<<<<<< @@ -50508,7 +50555,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ (__pyx_v_e_gap_order[__pyx_v_j]) = __pyx_v_i; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1310 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1312 * e_gap_order[k+1] = e_gap_order[k] * e_gap_order[j] = i * break # <<<<<<<<<<<<<< @@ -50522,7 +50569,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1312 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1314 * break * else: * e_gap_order[i] = i # <<<<<<<<<<<<<< @@ -50537,7 +50584,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ } __pyx_L3:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1314 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1316 * e_gap_order[i] = i * * e_x_low = e_low # <<<<<<<<<<<<<< @@ -50546,7 +50593,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_e_x_low = __pyx_v_e_low; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1315 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1317 * * e_x_low = e_low * e_x_high = e_high # <<<<<<<<<<<<<< @@ -50555,7 +50602,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_e_x_high = __pyx_v_e_high; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1316 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1318 * e_x_low = e_low * e_x_high = e_high * if self.tight_phrases == 0: # <<<<<<<<<<<<<< @@ -50565,7 +50612,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_2 = (__pyx_v_self->tight_phrases == 0); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1317 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1319 * e_x_high = e_high * if self.tight_phrases == 0: * while e_x_low > 0 and e_high - e_x_low < self.train_max_initial_size and e_links_low[e_x_low-1] == -1: # <<<<<<<<<<<<<< @@ -50588,7 +50635,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ } if (!__pyx_t_6) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1318 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1320 * if self.tight_phrases == 0: * while e_x_low > 0 and e_high - e_x_low < self.train_max_initial_size and e_links_low[e_x_low-1] == -1: * e_x_low = e_x_low - 1 # <<<<<<<<<<<<<< @@ -50598,7 +50645,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_v_e_x_low = (__pyx_v_e_x_low - 1); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1319 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1321 * while e_x_low > 0 and e_high - e_x_low < self.train_max_initial_size and e_links_low[e_x_low-1] == -1: * e_x_low = e_x_low - 1 * while e_x_high < e_sent_len and e_x_high - e_low < self.train_max_initial_size and e_links_low[e_x_high] == -1: # <<<<<<<<<<<<<< @@ -50621,7 +50668,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ } if (!__pyx_t_2) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1320 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1322 * e_x_low = e_x_low - 1 * while e_x_high < e_sent_len and e_x_high - e_low < self.train_max_initial_size and e_links_low[e_x_high] == -1: * e_x_high = e_x_high + 1 # <<<<<<<<<<<<<< @@ -50634,7 +50681,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ } __pyx_L11:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1322 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1324 * e_x_high = e_x_high + 1 * * for i from e_x_low <= i <= e_low: # <<<<<<<<<<<<<< @@ -50644,7 +50691,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_3 = __pyx_v_e_low; for (__pyx_v_i = __pyx_v_e_x_low; __pyx_v_i <= __pyx_t_3; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1323 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1325 * * for i from e_x_low <= i <= e_low: * e_gaps1 = self.int_arr_extend(e_gaps1, &len1, &i, 1) # <<<<<<<<<<<<<< @@ -50654,7 +50701,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_v_e_gaps1 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->int_arr_extend(__pyx_v_self, __pyx_v_e_gaps1, (&__pyx_v_len1), (&__pyx_v_i), 1); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1325 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1327 * e_gaps1 = self.int_arr_extend(e_gaps1, &len1, &i, 1) * * for i from 0 <= i < num_gaps: # <<<<<<<<<<<<<< @@ -50664,7 +50711,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_3 = __pyx_v_num_gaps; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_3; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1326 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1328 * * for i from 0 <= i < num_gaps: * e_gaps2 = <int*> malloc(0) # <<<<<<<<<<<<<< @@ -50673,7 +50720,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_e_gaps2 = ((int *)malloc(0)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1327 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1329 * for i from 0 <= i < num_gaps: * e_gaps2 = <int*> malloc(0) * len2 = 0 # <<<<<<<<<<<<<< @@ -50682,7 +50729,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_len2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1329 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1331 * len2 = 0 * * j = e_gap_order[i] # <<<<<<<<<<<<<< @@ -50691,7 +50738,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_j = (__pyx_v_e_gap_order[__pyx_v_i]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1330 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1332 * * j = e_gap_order[i] * e_x_gap_low = e_gap_low[j] # <<<<<<<<<<<<<< @@ -50700,7 +50747,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_e_x_gap_low = (__pyx_v_e_gap_low[__pyx_v_j]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1331 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1333 * j = e_gap_order[i] * e_x_gap_low = e_gap_low[j] * e_x_gap_high = e_gap_high[j] # <<<<<<<<<<<<<< @@ -50709,7 +50756,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_e_x_gap_high = (__pyx_v_e_gap_high[__pyx_v_j]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1332 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1334 * e_x_gap_low = e_gap_low[j] * e_x_gap_high = e_gap_high[j] * if self.tight_phrases == 0: # <<<<<<<<<<<<<< @@ -50719,7 +50766,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_2 = (__pyx_v_self->tight_phrases == 0); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1333 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1335 * e_x_gap_high = e_gap_high[j] * if self.tight_phrases == 0: * while e_x_gap_low > e_x_low and e_links_low[e_x_gap_low-1] == -1: # <<<<<<<<<<<<<< @@ -50736,7 +50783,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ } if (!__pyx_t_7) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1334 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1336 * if self.tight_phrases == 0: * while e_x_gap_low > e_x_low and e_links_low[e_x_gap_low-1] == -1: * e_x_gap_low = e_x_gap_low - 1 # <<<<<<<<<<<<<< @@ -50746,7 +50793,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_v_e_x_gap_low = (__pyx_v_e_x_gap_low - 1); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1335 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1337 * while e_x_gap_low > e_x_low and e_links_low[e_x_gap_low-1] == -1: * e_x_gap_low = e_x_gap_low - 1 * while e_x_gap_high < e_x_high and e_links_low[e_x_gap_high] == -1: # <<<<<<<<<<<<<< @@ -50763,7 +50810,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ } if (!__pyx_t_6) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1336 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1338 * e_x_gap_low = e_x_gap_low - 1 * while e_x_gap_high < e_x_high and e_links_low[e_x_gap_high] == -1: * e_x_gap_high = e_x_gap_high + 1 # <<<<<<<<<<<<<< @@ -50776,7 +50823,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ } __pyx_L20:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1338 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1340 * e_x_gap_high = e_x_gap_high + 1 * * k = 0 # <<<<<<<<<<<<<< @@ -50785,7 +50832,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_k = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1339 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1341 * * k = 0 * step = 1+(i*2) # <<<<<<<<<<<<<< @@ -50794,7 +50841,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_step = (1 + (__pyx_v_i * 2)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1340 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1342 * k = 0 * step = 1+(i*2) * while k < len1: # <<<<<<<<<<<<<< @@ -50805,7 +50852,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_6 = (__pyx_v_k < __pyx_v_len1); if (!__pyx_t_6) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1341 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1343 * step = 1+(i*2) * while k < len1: * for m from e_x_gap_low <= m <= e_gap_low[j]: # <<<<<<<<<<<<<< @@ -50815,7 +50862,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_4 = (__pyx_v_e_gap_low[__pyx_v_j]); for (__pyx_v_m = __pyx_v_e_x_gap_low; __pyx_v_m <= __pyx_t_4; __pyx_v_m++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1342 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1344 * while k < len1: * for m from e_x_gap_low <= m <= e_gap_low[j]: * if m >= e_gaps1[k+step-1]: # <<<<<<<<<<<<<< @@ -50825,7 +50872,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_6 = (__pyx_v_m >= (__pyx_v_e_gaps1[((__pyx_v_k + __pyx_v_step) - 1)])); if (__pyx_t_6) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1343 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1345 * for m from e_x_gap_low <= m <= e_gap_low[j]: * if m >= e_gaps1[k+step-1]: * for n from e_gap_high[j] <= n <= e_x_gap_high: # <<<<<<<<<<<<<< @@ -50835,7 +50882,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_5 = __pyx_v_e_x_gap_high; for (__pyx_v_n = (__pyx_v_e_gap_high[__pyx_v_j]); __pyx_v_n <= __pyx_t_5; __pyx_v_n++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1344 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1346 * if m >= e_gaps1[k+step-1]: * for n from e_gap_high[j] <= n <= e_x_gap_high: * if n-m >= 1: # extractor.py doesn't restrict target-side gap length # <<<<<<<<<<<<<< @@ -50845,7 +50892,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_6 = ((__pyx_v_n - __pyx_v_m) >= 1); if (__pyx_t_6) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1345 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1347 * for n from e_gap_high[j] <= n <= e_x_gap_high: * if n-m >= 1: # extractor.py doesn't restrict target-side gap length * e_gaps2 = self.int_arr_extend(e_gaps2, &len2, e_gaps1+k, step) # <<<<<<<<<<<<<< @@ -50854,7 +50901,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_e_gaps2 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->int_arr_extend(__pyx_v_self, __pyx_v_e_gaps2, (&__pyx_v_len2), (__pyx_v_e_gaps1 + __pyx_v_k), __pyx_v_step); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1346 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1348 * if n-m >= 1: # extractor.py doesn't restrict target-side gap length * e_gaps2 = self.int_arr_extend(e_gaps2, &len2, e_gaps1+k, step) * e_gaps2 = self.int_arr_extend(e_gaps2, &len2, &m, 1) # <<<<<<<<<<<<<< @@ -50863,7 +50910,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_e_gaps2 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->int_arr_extend(__pyx_v_self, __pyx_v_e_gaps2, (&__pyx_v_len2), (&__pyx_v_m), 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1347 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1349 * e_gaps2 = self.int_arr_extend(e_gaps2, &len2, e_gaps1+k, step) * e_gaps2 = self.int_arr_extend(e_gaps2, &len2, &m, 1) * e_gaps2 = self.int_arr_extend(e_gaps2, &len2, &n, 1) # <<<<<<<<<<<<<< @@ -50880,7 +50927,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_L29:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1348 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1350 * e_gaps2 = self.int_arr_extend(e_gaps2, &len2, &m, 1) * e_gaps2 = self.int_arr_extend(e_gaps2, &len2, &n, 1) * k = k + step # <<<<<<<<<<<<<< @@ -50890,7 +50937,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_v_k = (__pyx_v_k + __pyx_v_step); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1349 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1351 * e_gaps2 = self.int_arr_extend(e_gaps2, &len2, &n, 1) * k = k + step * free(e_gaps1) # <<<<<<<<<<<<<< @@ -50899,7 +50946,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ free(__pyx_v_e_gaps1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1350 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1352 * k = k + step * free(e_gaps1) * e_gaps1 = e_gaps2 # <<<<<<<<<<<<<< @@ -50908,7 +50955,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_e_gaps1 = __pyx_v_e_gaps2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1351 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1353 * free(e_gaps1) * e_gaps1 = e_gaps2 * len1 = len2 # <<<<<<<<<<<<<< @@ -50918,7 +50965,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_v_len1 = __pyx_v_len2; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1353 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1355 * len1 = len2 * * step = 1+(num_gaps*2) # <<<<<<<<<<<<<< @@ -50927,7 +50974,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_step = (1 + (__pyx_v_num_gaps * 2)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1354 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1356 * * step = 1+(num_gaps*2) * e_gaps2 = <int*> malloc(0) # <<<<<<<<<<<<<< @@ -50936,7 +50983,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_e_gaps2 = ((int *)malloc(0)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1355 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1357 * step = 1+(num_gaps*2) * e_gaps2 = <int*> malloc(0) * len2 = 0 # <<<<<<<<<<<<<< @@ -50945,7 +50992,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_len2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1356 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1358 * e_gaps2 = <int*> malloc(0) * len2 = 0 * for i from e_high <= i <= e_x_high: # <<<<<<<<<<<<<< @@ -50955,7 +51002,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_3 = __pyx_v_e_x_high; for (__pyx_v_i = __pyx_v_e_high; __pyx_v_i <= __pyx_t_3; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1357 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1359 * len2 = 0 * for i from e_high <= i <= e_x_high: * j = 0 # <<<<<<<<<<<<<< @@ -50964,7 +51011,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_j = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1358 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1360 * for i from e_high <= i <= e_x_high: * j = 0 * while j < len1: # <<<<<<<<<<<<<< @@ -50975,7 +51022,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_6 = (__pyx_v_j < __pyx_v_len1); if (!__pyx_t_6) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1359 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1361 * j = 0 * while j < len1: * if i - e_gaps1[j] <= self.train_max_initial_size and i >= e_gaps1[j+step-1]: # <<<<<<<<<<<<<< @@ -50991,7 +51038,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ } if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1360 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1362 * while j < len1: * if i - e_gaps1[j] <= self.train_max_initial_size and i >= e_gaps1[j+step-1]: * e_gaps2 = self.int_arr_extend(e_gaps2, &len2, e_gaps1+j, step) # <<<<<<<<<<<<<< @@ -51000,7 +51047,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_e_gaps2 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->int_arr_extend(__pyx_v_self, __pyx_v_e_gaps2, (&__pyx_v_len2), (__pyx_v_e_gaps1 + __pyx_v_j), __pyx_v_step); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1361 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1363 * if i - e_gaps1[j] <= self.train_max_initial_size and i >= e_gaps1[j+step-1]: * e_gaps2 = self.int_arr_extend(e_gaps2, &len2, e_gaps1+j, step) * e_gaps2 = self.int_arr_extend(e_gaps2, &len2, &i, 1) # <<<<<<<<<<<<<< @@ -51012,7 +51059,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ } __pyx_L37:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1362 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1364 * e_gaps2 = self.int_arr_extend(e_gaps2, &len2, e_gaps1+j, step) * e_gaps2 = self.int_arr_extend(e_gaps2, &len2, &i, 1) * j = j + step # <<<<<<<<<<<<<< @@ -51023,7 +51070,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ } } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1363 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1365 * e_gaps2 = self.int_arr_extend(e_gaps2, &len2, &i, 1) * j = j + step * free(e_gaps1) # <<<<<<<<<<<<<< @@ -51032,7 +51079,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ free(__pyx_v_e_gaps1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1364 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1366 * j = j + step * free(e_gaps1) * e_gaps1 = e_gaps2 # <<<<<<<<<<<<<< @@ -51041,7 +51088,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_e_gaps1 = __pyx_v_e_gaps2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1365 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1367 * free(e_gaps1) * e_gaps1 = e_gaps2 * len1 = len2 # <<<<<<<<<<<<<< @@ -51050,7 +51097,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_len1 = __pyx_v_len2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1367 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1369 * len1 = len2 * * step = (num_gaps+1)*2 # <<<<<<<<<<<<<< @@ -51059,7 +51106,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_step = ((__pyx_v_num_gaps + 1) * 2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1368 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1370 * * step = (num_gaps+1)*2 * i = 0 # <<<<<<<<<<<<<< @@ -51068,7 +51115,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_i = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1370 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1372 * i = 0 * * while i < len1: # <<<<<<<<<<<<<< @@ -51079,7 +51126,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_2 = (__pyx_v_i < __pyx_v_len1); if (!__pyx_t_2) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1371 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1373 * * while i < len1: * ephr_arr._clear() # <<<<<<<<<<<<<< @@ -51088,7 +51135,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_ephr_arr->__pyx_vtab)->_clear(__pyx_v_ephr_arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1372 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1374 * while i < len1: * ephr_arr._clear() * num_chunks = 0 # <<<<<<<<<<<<<< @@ -51097,20 +51144,20 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_num_chunks = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1373 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1375 * ephr_arr._clear() * num_chunks = 0 * indexes = [] # <<<<<<<<<<<<<< * for j from 0 <= j < num_gaps+1: * if e_gaps1[i+2*j] < e_gaps1[i+(2*j)+1]: */ - __pyx_t_1 = PyList_New(0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1373; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyList_New(0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1375; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_XDECREF(((PyObject *)__pyx_v_indexes)); __pyx_v_indexes = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1374 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1376 * num_chunks = 0 * indexes = [] * for j from 0 <= j < num_gaps+1: # <<<<<<<<<<<<<< @@ -51120,7 +51167,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_9 = (__pyx_v_num_gaps + 1); for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_9; __pyx_v_j++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1375 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1377 * indexes = [] * for j from 0 <= j < num_gaps+1: * if e_gaps1[i+2*j] < e_gaps1[i+(2*j)+1]: # <<<<<<<<<<<<<< @@ -51130,7 +51177,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_2 = ((__pyx_v_e_gaps1[(__pyx_v_i + (2 * __pyx_v_j))]) < (__pyx_v_e_gaps1[((__pyx_v_i + (2 * __pyx_v_j)) + 1)])); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1376 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1378 * for j from 0 <= j < num_gaps+1: * if e_gaps1[i+2*j] < e_gaps1[i+(2*j)+1]: * num_chunks = num_chunks + 1 # <<<<<<<<<<<<<< @@ -51142,7 +51189,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ } __pyx_L42:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1377 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1379 * if e_gaps1[i+2*j] < e_gaps1[i+(2*j)+1]: * num_chunks = num_chunks + 1 * for k from e_gaps1[i+2*j] <= k < e_gaps1[i+(2*j)+1]: # <<<<<<<<<<<<<< @@ -51152,19 +51199,19 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_3 = (__pyx_v_e_gaps1[((__pyx_v_i + (2 * __pyx_v_j)) + 1)]); for (__pyx_v_k = (__pyx_v_e_gaps1[(__pyx_v_i + (2 * __pyx_v_j))]); __pyx_v_k < __pyx_t_3; __pyx_v_k++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1378 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1380 * num_chunks = num_chunks + 1 * for k from e_gaps1[i+2*j] <= k < e_gaps1[i+(2*j)+1]: * indexes.append(k) # <<<<<<<<<<<<<< * ephr_arr._append(self.eid2symid[self.eda.data.arr[e_sent_start+k]]) * if j < num_gaps: */ - __pyx_t_1 = PyInt_FromLong(__pyx_v_k); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1378; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyInt_FromLong(__pyx_v_k); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1380; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_10 = PyList_Append(__pyx_v_indexes, __pyx_t_1); if (unlikely(__pyx_t_10 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1378; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyList_Append(__pyx_v_indexes, __pyx_t_1); if (unlikely(__pyx_t_10 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1380; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1379 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1381 * for k from e_gaps1[i+2*j] <= k < e_gaps1[i+(2*j)+1]: * indexes.append(k) * ephr_arr._append(self.eid2symid[self.eda.data.arr[e_sent_start+k]]) # <<<<<<<<<<<<<< @@ -51172,14 +51219,14 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ * indexes.append(sym_setindex(self.category, e_gap_order[j]+1)) */ __pyx_t_4 = (__pyx_v_self->eda->data->arr[(__pyx_v_e_sent_start + __pyx_v_k)]); - __pyx_t_1 = __Pyx_GetItemInt(((PyObject *)__pyx_v_self->eid2symid), __pyx_t_4, sizeof(int), PyInt_FromLong); if (!__pyx_t_1) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1379; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_GetItemInt(((PyObject *)__pyx_v_self->eid2symid), __pyx_t_4, sizeof(int), PyInt_FromLong); if (!__pyx_t_1) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1381; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_4 = __Pyx_PyInt_AsInt(__pyx_t_1); if (unlikely((__pyx_t_4 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1379; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = __Pyx_PyInt_AsInt(__pyx_t_1); if (unlikely((__pyx_t_4 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1381; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_ephr_arr->__pyx_vtab)->_append(__pyx_v_ephr_arr, __pyx_t_4); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1380 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1382 * indexes.append(k) * ephr_arr._append(self.eid2symid[self.eda.data.arr[e_sent_start+k]]) * if j < num_gaps: # <<<<<<<<<<<<<< @@ -51189,19 +51236,19 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_t_2 = (__pyx_v_j < __pyx_v_num_gaps); if (__pyx_t_2) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1381 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1383 * ephr_arr._append(self.eid2symid[self.eda.data.arr[e_sent_start+k]]) * if j < num_gaps: * indexes.append(sym_setindex(self.category, e_gap_order[j]+1)) # <<<<<<<<<<<<<< * ephr_arr._append(sym_setindex(self.category, e_gap_order[j]+1)) * i = i + step */ - __pyx_t_1 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, ((__pyx_v_e_gap_order[__pyx_v_j]) + 1))); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1381; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, ((__pyx_v_e_gap_order[__pyx_v_j]) + 1))); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1383; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_10 = PyList_Append(__pyx_v_indexes, __pyx_t_1); if (unlikely(__pyx_t_10 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1381; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyList_Append(__pyx_v_indexes, __pyx_t_1); if (unlikely(__pyx_t_10 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1383; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1382 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1384 * if j < num_gaps: * indexes.append(sym_setindex(self.category, e_gap_order[j]+1)) * ephr_arr._append(sym_setindex(self.category, e_gap_order[j]+1)) # <<<<<<<<<<<<<< @@ -51214,7 +51261,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ __pyx_L45:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1383 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1385 * indexes.append(sym_setindex(self.category, e_gap_order[j]+1)) * ephr_arr._append(sym_setindex(self.category, e_gap_order[j]+1)) * i = i + step # <<<<<<<<<<<<<< @@ -51223,7 +51270,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ */ __pyx_v_i = (__pyx_v_i + __pyx_v_step); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1384 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1386 * ephr_arr._append(sym_setindex(self.category, e_gap_order[j]+1)) * i = i + step * if ephr_arr.len <= self.max_target_length and num_chunks <= self.max_target_chunks: # <<<<<<<<<<<<<< @@ -51239,22 +51286,22 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases(struct _ } if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1385 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1387 * i = i + step * if ephr_arr.len <= self.max_target_length and num_chunks <= self.max_target_chunks: * result.append((Phrase(ephr_arr),indexes)) # <<<<<<<<<<<<<< * * free(e_gaps1) */ - __pyx_t_1 = PyTuple_New(1); 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if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1401; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_t_7), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1403; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_7)); __pyx_t_7 = 0; @@ -51476,19 +51523,19 @@ static struct __pyx_obj_3_sa_IntList *__pyx_f_3_sa_23HieroCachingRuleFactory_cre __pyx_v_j = __pyx_t_5; __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1402 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1404 * if (sent_links[idx] == s): * j = eindexes.index(sent_links[idx+1]) * ret.append(i*65536+j) # <<<<<<<<<<<<<< * idx += 2 * return ret */ - __pyx_t_5 = PyInt_FromLong((__pyx_v_i * 65536)); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1402; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyInt_FromLong((__pyx_v_i * 65536)); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1404; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __pyx_t_7 = PyNumber_Add(__pyx_t_5, __pyx_v_j); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1402; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyNumber_Add(__pyx_t_5, __pyx_v_j); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1404; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_5 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_ret), __pyx_t_7); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1402; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_ret), __pyx_t_7); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1404; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0; __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; @@ -51496,14 +51543,14 @@ static struct __pyx_obj_3_sa_IntList *__pyx_f_3_sa_23HieroCachingRuleFactory_cre } __pyx_L8:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1403 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1405 * j = eindexes.index(sent_links[idx+1]) * ret.append(i*65536+j) * idx += 2 # <<<<<<<<<<<<<< * return ret * */ - __pyx_t_5 = PyNumber_InPlaceAdd(__pyx_v_idx, __pyx_int_2); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1403; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyNumber_InPlaceAdd(__pyx_v_idx, __pyx_int_2); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1405; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_v_idx); __pyx_v_idx = __pyx_t_5; @@ -51512,7 +51559,7 @@ static struct __pyx_obj_3_sa_IntList *__pyx_f_3_sa_23HieroCachingRuleFactory_cre __pyx_L3_continue:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1404 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1406 * ret.append(i*65536+j) * idx += 2 * return ret # <<<<<<<<<<<<<< @@ -51542,7 +51589,7 @@ static struct __pyx_obj_3_sa_IntList *__pyx_f_3_sa_23HieroCachingRuleFactory_cre return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1406 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1408 * return ret * * cdef extract(self, Phrase phrase, Matching* matching, int* chunklen, int num_chunks): # <<<<<<<<<<<<<< @@ -51636,19 +51683,19 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj int __pyx_clineno = 0; __Pyx_RefNannySetupContext("extract", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1419 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1421 * cdef reason_for_failure * * fphr_arr = IntList() # <<<<<<<<<<<<<< * phrase_len = phrase.n * extracts = [] */ - __pyx_t_1 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_IntList)), ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1419; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_IntList)), ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1421; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_v_fphr_arr = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1420 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1422 * * fphr_arr = IntList() * phrase_len = phrase.n # <<<<<<<<<<<<<< @@ -51657,19 +51704,19 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_phrase_len = __pyx_v_phrase->n; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1421 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1423 * fphr_arr = IntList() * phrase_len = phrase.n * extracts = [] # <<<<<<<<<<<<<< * sent_links = self.alignment._get_sent_links(matching.sent_id, &num_links) * */ - __pyx_t_1 = PyList_New(0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1421; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyList_New(0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1423; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_v_extracts = ((PyObject *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1422 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1424 * phrase_len = phrase.n * extracts = [] * sent_links = self.alignment._get_sent_links(matching.sent_id, &num_links) # <<<<<<<<<<<<<< @@ -51678,7 +51725,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_sent_links = ((struct __pyx_vtabstruct_3_sa_Alignment *)__pyx_v_self->alignment->__pyx_vtab)->_get_sent_links(__pyx_v_self->alignment, __pyx_v_matching->sent_id, (&__pyx_v_num_links)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1424 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1426 * sent_links = self.alignment._get_sent_links(matching.sent_id, &num_links) * * e_sent_start = self.eda.sent_index.arr[matching.sent_id] # <<<<<<<<<<<<<< @@ -51687,7 +51734,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_e_sent_start = (__pyx_v_self->eda->sent_index->arr[__pyx_v_matching->sent_id]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1425 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1427 * * e_sent_start = self.eda.sent_index.arr[matching.sent_id] * e_sent_end = self.eda.sent_index.arr[matching.sent_id+1] # <<<<<<<<<<<<<< @@ -51696,7 +51743,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_e_sent_end = (__pyx_v_self->eda->sent_index->arr[(__pyx_v_matching->sent_id + 1)]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1426 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1428 * e_sent_start = self.eda.sent_index.arr[matching.sent_id] * e_sent_end = self.eda.sent_index.arr[matching.sent_id+1] * e_sent_len = e_sent_end - e_sent_start - 1 # <<<<<<<<<<<<<< @@ -51705,7 +51752,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_e_sent_len = ((__pyx_v_e_sent_end - __pyx_v_e_sent_start) - 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1427 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1429 * e_sent_end = self.eda.sent_index.arr[matching.sent_id+1] * e_sent_len = e_sent_end - e_sent_start - 1 * f_sent_start = self.fda.sent_index.arr[matching.sent_id] # <<<<<<<<<<<<<< @@ -51714,7 +51761,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_f_sent_start = (__pyx_v_self->fda->sent_index->arr[__pyx_v_matching->sent_id]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1428 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1430 * e_sent_len = e_sent_end - e_sent_start - 1 * f_sent_start = self.fda.sent_index.arr[matching.sent_id] * f_sent_end = self.fda.sent_index.arr[matching.sent_id+1] # <<<<<<<<<<<<<< @@ -51723,7 +51770,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_f_sent_end = (__pyx_v_self->fda->sent_index->arr[(__pyx_v_matching->sent_id + 1)]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1429 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1431 * f_sent_start = self.fda.sent_index.arr[matching.sent_id] * f_sent_end = self.fda.sent_index.arr[matching.sent_id+1] * f_sent_len = f_sent_end - f_sent_start - 1 # <<<<<<<<<<<<<< @@ -51732,21 +51779,21 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_f_sent_len = ((__pyx_v_f_sent_end - __pyx_v_f_sent_start) - 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1431 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1433 * f_sent_len = f_sent_end - f_sent_start - 1 * * self.findexes1.reset() # <<<<<<<<<<<<<< * sofar = 0 * for i in range(num_chunks): */ - __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes1), __pyx_n_s__reset); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1431; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes1), __pyx_n_s__reset); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1433; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_2 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1431; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1433; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1432 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1434 * * self.findexes1.reset() * sofar = 0 # <<<<<<<<<<<<<< @@ -51756,7 +51803,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_INCREF(__pyx_int_0); __pyx_v_sofar = __pyx_int_0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1433 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1435 * self.findexes1.reset() * sofar = 0 * for i in range(num_chunks): # <<<<<<<<<<<<<< @@ -51767,7 +51814,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { __pyx_v_i = __pyx_t_4; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1434 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1436 * sofar = 0 * for i in range(num_chunks): * for j in range(chunklen[i]): # <<<<<<<<<<<<<< @@ -51778,35 +51825,35 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) { __pyx_v_j = __pyx_t_6; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1435 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1437 * for i in range(num_chunks): * for j in range(chunklen[i]): * self.findexes1.append(matching.arr[matching.start+i]+j-f_sent_start); # <<<<<<<<<<<<<< * sofar += 1 * if (i+1<num_chunks): */ - __pyx_t_2 = PyInt_FromLong((((__pyx_v_matching->arr[(__pyx_v_matching->start + __pyx_v_i)]) + __pyx_v_j) - __pyx_v_f_sent_start)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1435; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyInt_FromLong((((__pyx_v_matching->arr[(__pyx_v_matching->start + __pyx_v_i)]) + __pyx_v_j) - __pyx_v_f_sent_start)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1437; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_1 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes1), __pyx_t_2); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1435; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes1), __pyx_t_2); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1437; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1436 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1438 * for j in range(chunklen[i]): * self.findexes1.append(matching.arr[matching.start+i]+j-f_sent_start); * sofar += 1 # <<<<<<<<<<<<<< * if (i+1<num_chunks): * self.findexes1.append(phrase[sofar]) */ - __pyx_t_1 = PyNumber_InPlaceAdd(__pyx_v_sofar, __pyx_int_1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1436; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyNumber_InPlaceAdd(__pyx_v_sofar, __pyx_int_1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1438; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_v_sofar); __pyx_v_sofar = __pyx_t_1; __pyx_t_1 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1437 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1439 * self.findexes1.append(matching.arr[matching.start+i]+j-f_sent_start); * sofar += 1 * if (i+1<num_chunks): # <<<<<<<<<<<<<< @@ -51816,28 +51863,28 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_7 = ((__pyx_v_i + 1) < __pyx_v_num_chunks); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1438 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1440 * sofar += 1 * if (i+1<num_chunks): * self.findexes1.append(phrase[sofar]) # <<<<<<<<<<<<<< * sofar += 1 * */ - __pyx_t_1 = PyObject_GetItem(((PyObject *)__pyx_v_phrase), __pyx_v_sofar); if (!__pyx_t_1) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1438; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetItem(((PyObject *)__pyx_v_phrase), __pyx_v_sofar); if (!__pyx_t_1) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1440; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_2 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes1), __pyx_t_1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1438; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes1), __pyx_t_1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1440; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1439 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1441 * if (i+1<num_chunks): * self.findexes1.append(phrase[sofar]) * sofar += 1 # <<<<<<<<<<<<<< * * */ - __pyx_t_2 = PyNumber_InPlaceAdd(__pyx_v_sofar, __pyx_int_1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1439; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyNumber_InPlaceAdd(__pyx_v_sofar, __pyx_int_1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1441; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_v_sofar); __pyx_v_sofar = __pyx_t_2; @@ -51847,7 +51894,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_L7:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1442 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1444 * * * e_links_low = <int*> malloc(e_sent_len*sizeof(int)) # <<<<<<<<<<<<<< @@ -51856,7 +51903,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_e_links_low = ((int *)malloc((__pyx_v_e_sent_len * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1443 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1445 * * e_links_low = <int*> malloc(e_sent_len*sizeof(int)) * e_links_high = <int*> malloc(e_sent_len*sizeof(int)) # <<<<<<<<<<<<<< @@ -51865,7 +51912,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_e_links_high = ((int *)malloc((__pyx_v_e_sent_len * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1444 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1446 * e_links_low = <int*> malloc(e_sent_len*sizeof(int)) * e_links_high = <int*> malloc(e_sent_len*sizeof(int)) * f_links_low = <int*> malloc(f_sent_len*sizeof(int)) # <<<<<<<<<<<<<< @@ -51874,7 +51921,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_f_links_low = ((int *)malloc((__pyx_v_f_sent_len * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1445 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1447 * e_links_high = <int*> malloc(e_sent_len*sizeof(int)) * f_links_low = <int*> malloc(f_sent_len*sizeof(int)) * f_links_high = <int*> malloc(f_sent_len*sizeof(int)) # <<<<<<<<<<<<<< @@ -51883,7 +51930,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_f_links_high = ((int *)malloc((__pyx_v_f_sent_len * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1446 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1448 * f_links_low = <int*> malloc(f_sent_len*sizeof(int)) * f_links_high = <int*> malloc(f_sent_len*sizeof(int)) * f_gap_low = <int*> malloc((num_chunks+1)*sizeof(int)) # <<<<<<<<<<<<<< @@ -51892,7 +51939,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_f_gap_low = ((int *)malloc(((__pyx_v_num_chunks + 1) * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1447 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1449 * f_links_high = <int*> malloc(f_sent_len*sizeof(int)) * f_gap_low = <int*> malloc((num_chunks+1)*sizeof(int)) * f_gap_high = <int*> malloc((num_chunks+1)*sizeof(int)) # <<<<<<<<<<<<<< @@ -51901,7 +51948,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_f_gap_high = ((int *)malloc(((__pyx_v_num_chunks + 1) * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1448 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1450 * f_gap_low = <int*> malloc((num_chunks+1)*sizeof(int)) * f_gap_high = <int*> malloc((num_chunks+1)*sizeof(int)) * e_gap_low = <int*> malloc((num_chunks+1)*sizeof(int)) # <<<<<<<<<<<<<< @@ -51910,7 +51957,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_e_gap_low = ((int *)malloc(((__pyx_v_num_chunks + 1) * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1449 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1451 * f_gap_high = <int*> malloc((num_chunks+1)*sizeof(int)) * e_gap_low = <int*> malloc((num_chunks+1)*sizeof(int)) * e_gap_high = <int*> malloc((num_chunks+1)*sizeof(int)) # <<<<<<<<<<<<<< @@ -51919,7 +51966,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_e_gap_high = ((int *)malloc(((__pyx_v_num_chunks + 1) * (sizeof(int))))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1450 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1452 * e_gap_low = <int*> malloc((num_chunks+1)*sizeof(int)) * e_gap_high = <int*> malloc((num_chunks+1)*sizeof(int)) * memset(f_gap_low, 0, (num_chunks+1)*sizeof(int)) # <<<<<<<<<<<<<< @@ -51928,7 +51975,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ memset(__pyx_v_f_gap_low, 0, ((__pyx_v_num_chunks + 1) * (sizeof(int)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1451 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1453 * e_gap_high = <int*> malloc((num_chunks+1)*sizeof(int)) * memset(f_gap_low, 0, (num_chunks+1)*sizeof(int)) * memset(f_gap_high, 0, (num_chunks+1)*sizeof(int)) # <<<<<<<<<<<<<< @@ -51937,7 +51984,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ memset(__pyx_v_f_gap_high, 0, ((__pyx_v_num_chunks + 1) * (sizeof(int)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1452 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1454 * memset(f_gap_low, 0, (num_chunks+1)*sizeof(int)) * memset(f_gap_high, 0, (num_chunks+1)*sizeof(int)) * memset(e_gap_low, 0, (num_chunks+1)*sizeof(int)) # <<<<<<<<<<<<<< @@ -51946,7 +51993,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ memset(__pyx_v_e_gap_low, 0, ((__pyx_v_num_chunks + 1) * (sizeof(int)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1453 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1455 * memset(f_gap_high, 0, (num_chunks+1)*sizeof(int)) * memset(e_gap_low, 0, (num_chunks+1)*sizeof(int)) * memset(e_gap_high, 0, (num_chunks+1)*sizeof(int)) # <<<<<<<<<<<<<< @@ -51955,7 +52002,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ memset(__pyx_v_e_gap_high, 0, ((__pyx_v_num_chunks + 1) * (sizeof(int)))); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1455 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1457 * memset(e_gap_high, 0, (num_chunks+1)*sizeof(int)) * * reason_for_failure = "" # <<<<<<<<<<<<<< @@ -51965,7 +52012,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_INCREF(((PyObject *)__pyx_kp_s_45)); __pyx_v_reason_for_failure = ((PyObject *)__pyx_kp_s_45); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1457 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1459 * reason_for_failure = "" * * for i from 0 <= i < e_sent_len: # <<<<<<<<<<<<<< @@ -51975,7 +52022,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_3 = __pyx_v_e_sent_len; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_3; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1458 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1460 * * for i from 0 <= i < e_sent_len: * e_links_low[i] = -1 # <<<<<<<<<<<<<< @@ -51984,7 +52031,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ (__pyx_v_e_links_low[__pyx_v_i]) = -1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1459 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1461 * for i from 0 <= i < e_sent_len: * e_links_low[i] = -1 * e_links_high[i] = -1 # <<<<<<<<<<<<<< @@ -51994,7 +52041,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj (__pyx_v_e_links_high[__pyx_v_i]) = -1; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1460 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1462 * e_links_low[i] = -1 * e_links_high[i] = -1 * for i from 0 <= i < f_sent_len: # <<<<<<<<<<<<<< @@ -52004,7 +52051,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_3 = __pyx_v_f_sent_len; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_3; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1461 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1463 * e_links_high[i] = -1 * for i from 0 <= i < f_sent_len: * f_links_low[i] = -1 # <<<<<<<<<<<<<< @@ -52013,7 +52060,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ (__pyx_v_f_links_low[__pyx_v_i]) = -1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1462 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1464 * for i from 0 <= i < f_sent_len: * f_links_low[i] = -1 * f_links_high[i] = -1 # <<<<<<<<<<<<<< @@ -52023,7 +52070,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj (__pyx_v_f_links_high[__pyx_v_i]) = -1; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1468 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1470 * # links that we care about (but then how to look up * # when we want to check something on the e side?) * i = 0 # <<<<<<<<<<<<<< @@ -52032,7 +52079,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_i = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1469 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1471 * # when we want to check something on the e side?) * i = 0 * while i < num_links*2: # <<<<<<<<<<<<<< @@ -52043,7 +52090,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_7 = (__pyx_v_i < (__pyx_v_num_links * 2)); if (!__pyx_t_7) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1470 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1472 * i = 0 * while i < num_links*2: * f_i = sent_links[i] # <<<<<<<<<<<<<< @@ -52052,7 +52099,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_f_i = (__pyx_v_sent_links[__pyx_v_i]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1471 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1473 * while i < num_links*2: * f_i = sent_links[i] * e_i = sent_links[i+1] # <<<<<<<<<<<<<< @@ -52061,7 +52108,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_e_i = (__pyx_v_sent_links[(__pyx_v_i + 1)]); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1472 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1474 * f_i = sent_links[i] * e_i = sent_links[i+1] * if f_links_low[f_i] == -1 or f_links_low[f_i] > e_i: # <<<<<<<<<<<<<< @@ -52077,7 +52124,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1473 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1475 * e_i = sent_links[i+1] * if f_links_low[f_i] == -1 or f_links_low[f_i] > e_i: * f_links_low[f_i] = e_i # <<<<<<<<<<<<<< @@ -52089,7 +52136,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L14:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1474 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1476 * if f_links_low[f_i] == -1 or f_links_low[f_i] > e_i: * f_links_low[f_i] = e_i * if f_links_high[f_i] == -1 or f_links_high[f_i] < e_i + 1: # <<<<<<<<<<<<<< @@ -52105,7 +52152,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_8) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1475 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1477 * f_links_low[f_i] = e_i * if f_links_high[f_i] == -1 or f_links_high[f_i] < e_i + 1: * f_links_high[f_i] = e_i + 1 # <<<<<<<<<<<<<< @@ -52117,7 +52164,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L15:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1476 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1478 * if f_links_high[f_i] == -1 or f_links_high[f_i] < e_i + 1: * f_links_high[f_i] = e_i + 1 * if e_links_low[e_i] == -1 or e_links_low[e_i] > f_i: # <<<<<<<<<<<<<< @@ -52133,7 +52180,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1477 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1479 * f_links_high[f_i] = e_i + 1 * if e_links_low[e_i] == -1 or e_links_low[e_i] > f_i: * e_links_low[e_i] = f_i # <<<<<<<<<<<<<< @@ -52145,7 +52192,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L16:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1478 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1480 * if e_links_low[e_i] == -1 or e_links_low[e_i] > f_i: * e_links_low[e_i] = f_i * if e_links_high[e_i] == -1 or e_links_high[e_i] < f_i + 1: # <<<<<<<<<<<<<< @@ -52161,7 +52208,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1479 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1481 * e_links_low[e_i] = f_i * if e_links_high[e_i] == -1 or e_links_high[e_i] < f_i + 1: * e_links_high[e_i] = f_i + 1 # <<<<<<<<<<<<<< @@ -52173,7 +52220,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L17:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1480 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1482 * if e_links_high[e_i] == -1 or e_links_high[e_i] < f_i + 1: * e_links_high[e_i] = f_i + 1 * i = i + 2 # <<<<<<<<<<<<<< @@ -52183,19 +52230,19 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_v_i = (__pyx_v_i + 2); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1482 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1484 * i = i + 2 * * als = [] # <<<<<<<<<<<<<< * for x in range(matching.start,matching.end): * al = (matching.arr[x]-f_sent_start,f_links_low[matching.arr[x]-f_sent_start]) */ - __pyx_t_2 = PyList_New(0); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1482; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyList_New(0); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1484; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __pyx_v_als = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1483 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1485 * * als = [] * for x in range(matching.start,matching.end): # <<<<<<<<<<<<<< @@ -52206,18 +52253,18 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj for (__pyx_t_4 = __pyx_v_matching->start; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { __pyx_v_x = __pyx_t_4; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1484 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1486 * als = [] * for x in range(matching.start,matching.end): * al = (matching.arr[x]-f_sent_start,f_links_low[matching.arr[x]-f_sent_start]) # <<<<<<<<<<<<<< * als.append(al) * # check all source-side alignment constraints */ - __pyx_t_2 = PyInt_FromLong(((__pyx_v_matching->arr[__pyx_v_x]) - __pyx_v_f_sent_start)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1484; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyInt_FromLong(((__pyx_v_matching->arr[__pyx_v_x]) - __pyx_v_f_sent_start)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1486; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_1 = PyInt_FromLong((__pyx_v_f_links_low[((__pyx_v_matching->arr[__pyx_v_x]) - __pyx_v_f_sent_start)])); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1484; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyInt_FromLong((__pyx_v_f_links_low[((__pyx_v_matching->arr[__pyx_v_x]) - __pyx_v_f_sent_start)])); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1486; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_10 = PyTuple_New(2); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1484; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyTuple_New(2); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1486; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); PyTuple_SET_ITEM(__pyx_t_10, 0, __pyx_t_2); __Pyx_GIVEREF(__pyx_t_2); @@ -52229,17 +52276,17 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_v_al = __pyx_t_10; __pyx_t_10 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1485 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1487 * for x in range(matching.start,matching.end): * al = (matching.arr[x]-f_sent_start,f_links_low[matching.arr[x]-f_sent_start]) * als.append(al) # <<<<<<<<<<<<<< * # check all source-side alignment constraints * met_constraints = 1 */ - __pyx_t_11 = PyList_Append(__pyx_v_als, ((PyObject *)__pyx_v_al)); if (unlikely(__pyx_t_11 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1485; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_11 = PyList_Append(__pyx_v_als, ((PyObject *)__pyx_v_al)); if (unlikely(__pyx_t_11 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1487; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1487 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1489 * als.append(al) * # check all source-side alignment constraints * met_constraints = 1 # <<<<<<<<<<<<<< @@ -52248,7 +52295,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_met_constraints = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1488 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1490 * # check all source-side alignment constraints * met_constraints = 1 * if self.require_aligned_terminal: # <<<<<<<<<<<<<< @@ -52257,7 +52304,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ if (__pyx_v_self->require_aligned_terminal) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1489 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1491 * met_constraints = 1 * if self.require_aligned_terminal: * num_aligned_chunks = 0 # <<<<<<<<<<<<<< @@ -52266,7 +52313,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_num_aligned_chunks = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1490 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1492 * if self.require_aligned_terminal: * num_aligned_chunks = 0 * for i from 0 <= i < num_chunks: # <<<<<<<<<<<<<< @@ -52276,7 +52323,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_3 = __pyx_v_num_chunks; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_3; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1491 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1493 * num_aligned_chunks = 0 * for i from 0 <= i < num_chunks: * for j from 0 <= j < chunklen[i]: # <<<<<<<<<<<<<< @@ -52286,7 +52333,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_4 = (__pyx_v_chunklen[__pyx_v_i]); for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_4; __pyx_v_j++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1492 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1494 * for i from 0 <= i < num_chunks: * for j from 0 <= j < chunklen[i]: * if f_links_low[matching.arr[matching.start+i]+j-f_sent_start] > -1: # <<<<<<<<<<<<<< @@ -52296,7 +52343,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_9 = ((__pyx_v_f_links_low[(((__pyx_v_matching->arr[(__pyx_v_matching->start + __pyx_v_i)]) + __pyx_v_j) - __pyx_v_f_sent_start)]) > -1); if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1493 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1495 * for j from 0 <= j < chunklen[i]: * if f_links_low[matching.arr[matching.start+i]+j-f_sent_start] > -1: * num_aligned_chunks = num_aligned_chunks + 1 # <<<<<<<<<<<<<< @@ -52305,7 +52352,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_num_aligned_chunks = (__pyx_v_num_aligned_chunks + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1494 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1496 * if f_links_low[matching.arr[matching.start+i]+j-f_sent_start] > -1: * num_aligned_chunks = num_aligned_chunks + 1 * break # <<<<<<<<<<<<<< @@ -52320,7 +52367,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_L24_break:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1495 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1497 * num_aligned_chunks = num_aligned_chunks + 1 * break * if num_aligned_chunks == 0: # <<<<<<<<<<<<<< @@ -52330,7 +52377,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_9 = (__pyx_v_num_aligned_chunks == 0); if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1496 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1498 * break * if num_aligned_chunks == 0: * reason_for_failure = "No aligned terminals" # <<<<<<<<<<<<<< @@ -52341,7 +52388,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_DECREF(__pyx_v_reason_for_failure); __pyx_v_reason_for_failure = ((PyObject *)__pyx_kp_s_126); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1497 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1499 * if num_aligned_chunks == 0: * reason_for_failure = "No aligned terminals" * met_constraints = 0 # <<<<<<<<<<<<<< @@ -52353,7 +52400,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L26:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1498 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1500 * reason_for_failure = "No aligned terminals" * met_constraints = 0 * if self.require_aligned_chunks and num_aligned_chunks < num_chunks: # <<<<<<<<<<<<<< @@ -52368,7 +52415,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1499 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1501 * met_constraints = 0 * if self.require_aligned_chunks and num_aligned_chunks < num_chunks: * reason_for_failure = "Unaligned chunk" # <<<<<<<<<<<<<< @@ -52379,7 +52426,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_DECREF(__pyx_v_reason_for_failure); __pyx_v_reason_for_failure = ((PyObject *)__pyx_kp_s_127); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1500 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1502 * if self.require_aligned_chunks and num_aligned_chunks < num_chunks: * reason_for_failure = "Unaligned chunk" * met_constraints = 0 # <<<<<<<<<<<<<< @@ -52394,7 +52441,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L20:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1502 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1504 * met_constraints = 0 * * if met_constraints and self.tight_phrases: # <<<<<<<<<<<<<< @@ -52408,7 +52455,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1504 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1506 * if met_constraints and self.tight_phrases: * # outside edge constraints are checked later * for i from 0 <= i < num_chunks-1: # <<<<<<<<<<<<<< @@ -52418,7 +52465,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_12 = (__pyx_v_num_chunks - 1); for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_12; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1505 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1507 * # outside edge constraints are checked later * for i from 0 <= i < num_chunks-1: * if f_links_low[matching.arr[matching.start+i]+chunklen[i]-f_sent_start] == -1: # <<<<<<<<<<<<<< @@ -52428,7 +52475,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_7 = ((__pyx_v_f_links_low[(((__pyx_v_matching->arr[(__pyx_v_matching->start + __pyx_v_i)]) + (__pyx_v_chunklen[__pyx_v_i])) - __pyx_v_f_sent_start)]) == -1); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1506 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1508 * for i from 0 <= i < num_chunks-1: * if f_links_low[matching.arr[matching.start+i]+chunklen[i]-f_sent_start] == -1: * reason_for_failure = "Gaps are not tight phrases" # <<<<<<<<<<<<<< @@ -52439,7 +52486,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_DECREF(__pyx_v_reason_for_failure); __pyx_v_reason_for_failure = ((PyObject *)__pyx_kp_s_128); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1507 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1509 * if f_links_low[matching.arr[matching.start+i]+chunklen[i]-f_sent_start] == -1: * reason_for_failure = "Gaps are not tight phrases" * met_constraints = 0 # <<<<<<<<<<<<<< @@ -52448,7 +52495,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_met_constraints = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1508 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1510 * reason_for_failure = "Gaps are not tight phrases" * met_constraints = 0 * break # <<<<<<<<<<<<<< @@ -52460,7 +52507,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L31:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1509 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1511 * met_constraints = 0 * break * if f_links_low[matching.arr[matching.start+i+1]-1-f_sent_start] == -1: # <<<<<<<<<<<<<< @@ -52470,7 +52517,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_7 = ((__pyx_v_f_links_low[(((__pyx_v_matching->arr[((__pyx_v_matching->start + __pyx_v_i) + 1)]) - 1) - __pyx_v_f_sent_start)]) == -1); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1510 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1512 * break * if f_links_low[matching.arr[matching.start+i+1]-1-f_sent_start] == -1: * reason_for_failure = "Gaps are not tight phrases" # <<<<<<<<<<<<<< @@ -52481,7 +52528,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_DECREF(__pyx_v_reason_for_failure); __pyx_v_reason_for_failure = ((PyObject *)__pyx_kp_s_128); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1511 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1513 * if f_links_low[matching.arr[matching.start+i+1]-1-f_sent_start] == -1: * reason_for_failure = "Gaps are not tight phrases" * met_constraints = 0 # <<<<<<<<<<<<<< @@ -52490,7 +52537,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_met_constraints = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1512 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1514 * reason_for_failure = "Gaps are not tight phrases" * met_constraints = 0 * break # <<<<<<<<<<<<<< @@ -52507,7 +52554,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L28:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1514 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1516 * break * * f_low = matching.arr[matching.start] - f_sent_start # <<<<<<<<<<<<<< @@ -52516,7 +52563,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_f_low = ((__pyx_v_matching->arr[__pyx_v_matching->start]) - __pyx_v_f_sent_start); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1515 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1517 * * f_low = matching.arr[matching.start] - f_sent_start * f_high = matching.arr[matching.start + matching.size - 1] + chunklen[num_chunks-1] - f_sent_start # <<<<<<<<<<<<<< @@ -52525,7 +52572,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_f_high = (((__pyx_v_matching->arr[((__pyx_v_matching->start + __pyx_v_matching->size) - 1)]) + (__pyx_v_chunklen[(__pyx_v_num_chunks - 1)])) - __pyx_v_f_sent_start); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1516 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1518 * f_low = matching.arr[matching.start] - f_sent_start * f_high = matching.arr[matching.start + matching.size - 1] + chunklen[num_chunks-1] - f_sent_start * if met_constraints: # <<<<<<<<<<<<<< @@ -52534,17 +52581,17 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ if (__pyx_v_met_constraints) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1518 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1520 * if met_constraints: * * if self.find_fixpoint(f_low, f_high, f_links_low, f_links_high, e_links_low, e_links_high, # <<<<<<<<<<<<<< * -1, -1, &e_low, &e_high, &f_back_low, &f_back_high, f_sent_len, e_sent_len, * self.train_max_initial_size, self.train_max_initial_size, */ - __pyx_t_10 = PyInt_FromLong(__pyx_v_f_high); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1518; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyInt_FromLong(__pyx_v_f_high); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1520; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1522 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1524 * self.train_max_initial_size, self.train_max_initial_size, * self.train_min_gap_size, 0, * self.max_nonterminals - num_chunks + 1, 1, 1, 0, 0): # <<<<<<<<<<<<<< @@ -52555,7 +52602,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1523 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1525 * self.train_min_gap_size, 0, * self.max_nonterminals - num_chunks + 1, 1, 1, 0, 0): * gap_error = 0 # <<<<<<<<<<<<<< @@ -52564,7 +52611,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_gap_error = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1524 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1526 * self.max_nonterminals - num_chunks + 1, 1, 1, 0, 0): * gap_error = 0 * num_gaps = 0 # <<<<<<<<<<<<<< @@ -52573,7 +52620,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_num_gaps = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1526 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1528 * num_gaps = 0 * * if f_back_low < f_low: # <<<<<<<<<<<<<< @@ -52583,7 +52630,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_7 = (__pyx_v_f_back_low < __pyx_v_f_low); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1527 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1529 * * if f_back_low < f_low: * f_gap_low[0] = f_back_low # <<<<<<<<<<<<<< @@ -52592,7 +52639,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ (__pyx_v_f_gap_low[0]) = __pyx_v_f_back_low; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1528 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1530 * if f_back_low < f_low: * f_gap_low[0] = f_back_low * f_gap_high[0] = f_low # <<<<<<<<<<<<<< @@ -52601,7 +52648,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ (__pyx_v_f_gap_high[0]) = __pyx_v_f_low; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1529 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1531 * f_gap_low[0] = f_back_low * f_gap_high[0] = f_low * num_gaps = 1 # <<<<<<<<<<<<<< @@ -52610,7 +52657,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_num_gaps = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1530 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1532 * f_gap_high[0] = f_low * num_gaps = 1 * gap_start = 0 # <<<<<<<<<<<<<< @@ -52619,7 +52666,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_gap_start = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1531 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1533 * num_gaps = 1 * gap_start = 0 * phrase_len = phrase_len+1 # <<<<<<<<<<<<<< @@ -52628,7 +52675,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_phrase_len = (__pyx_v_phrase_len + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1532 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1534 * gap_start = 0 * phrase_len = phrase_len+1 * if phrase_len > self.max_length: # <<<<<<<<<<<<<< @@ -52638,7 +52685,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_7 = (__pyx_v_phrase_len > __pyx_v_self->max_length); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1533 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1535 * phrase_len = phrase_len+1 * if phrase_len > self.max_length: * gap_error = 1 # <<<<<<<<<<<<<< @@ -52650,7 +52697,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L36:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1534 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1536 * if phrase_len > self.max_length: * gap_error = 1 * if self.tight_phrases: # <<<<<<<<<<<<<< @@ -52659,7 +52706,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ if (__pyx_v_self->tight_phrases) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1535 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1537 * gap_error = 1 * if self.tight_phrases: * if f_links_low[f_back_low] == -1 or f_links_low[f_low-1] == -1: # <<<<<<<<<<<<<< @@ -52675,7 +52722,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_8) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1536 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1538 * if self.tight_phrases: * if f_links_low[f_back_low] == -1 or f_links_low[f_low-1] == -1: * gap_error = 1 # <<<<<<<<<<<<<< @@ -52684,7 +52731,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_gap_error = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1537 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1539 * if f_links_low[f_back_low] == -1 or f_links_low[f_low-1] == -1: * gap_error = 1 * reason_for_failure = "Inside edges of preceding subphrase are not tight" # <<<<<<<<<<<<<< @@ -52704,7 +52751,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1539 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1541 * reason_for_failure = "Inside edges of preceding subphrase are not tight" * else: * gap_start = 1 # <<<<<<<<<<<<<< @@ -52713,7 +52760,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_gap_start = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1540 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1542 * else: * gap_start = 1 * if self.tight_phrases and f_links_low[f_low] == -1: # <<<<<<<<<<<<<< @@ -52728,7 +52775,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1543 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1545 * # this is not a hard error. we can't extract this phrase * # but we still might be able to extract a superphrase * met_constraints = 0 # <<<<<<<<<<<<<< @@ -52742,7 +52789,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L35:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1545 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1547 * met_constraints = 0 * * for i from 0 <= i < matching.size - 1: # <<<<<<<<<<<<<< @@ -52752,7 +52799,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_12 = (__pyx_v_matching->size - 1); for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_12; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1546 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1548 * * for i from 0 <= i < matching.size - 1: * f_gap_low[1+i] = matching.arr[matching.start+i] + chunklen[i] - f_sent_start # <<<<<<<<<<<<<< @@ -52761,7 +52808,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ (__pyx_v_f_gap_low[(1 + __pyx_v_i)]) = (((__pyx_v_matching->arr[(__pyx_v_matching->start + __pyx_v_i)]) + (__pyx_v_chunklen[__pyx_v_i])) - __pyx_v_f_sent_start); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1547 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1549 * for i from 0 <= i < matching.size - 1: * f_gap_low[1+i] = matching.arr[matching.start+i] + chunklen[i] - f_sent_start * f_gap_high[1+i] = matching.arr[matching.start+i+1] - f_sent_start # <<<<<<<<<<<<<< @@ -52770,7 +52817,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ (__pyx_v_f_gap_high[(1 + __pyx_v_i)]) = ((__pyx_v_matching->arr[((__pyx_v_matching->start + __pyx_v_i) + 1)]) - __pyx_v_f_sent_start); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1548 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1550 * f_gap_low[1+i] = matching.arr[matching.start+i] + chunklen[i] - f_sent_start * f_gap_high[1+i] = matching.arr[matching.start+i+1] - f_sent_start * num_gaps = num_gaps + 1 # <<<<<<<<<<<<<< @@ -52780,7 +52827,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_v_num_gaps = (__pyx_v_num_gaps + 1); } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1550 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1552 * num_gaps = num_gaps + 1 * * if f_high < f_back_high: # <<<<<<<<<<<<<< @@ -52790,7 +52837,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_7 = (__pyx_v_f_high < __pyx_v_f_back_high); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1551 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1553 * * if f_high < f_back_high: * f_gap_low[gap_start+num_gaps] = f_high # <<<<<<<<<<<<<< @@ -52799,7 +52846,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ (__pyx_v_f_gap_low[(__pyx_v_gap_start + __pyx_v_num_gaps)]) = __pyx_v_f_high; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1552 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1554 * if f_high < f_back_high: * f_gap_low[gap_start+num_gaps] = f_high * f_gap_high[gap_start+num_gaps] = f_back_high # <<<<<<<<<<<<<< @@ -52808,7 +52855,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ (__pyx_v_f_gap_high[(__pyx_v_gap_start + __pyx_v_num_gaps)]) = __pyx_v_f_back_high; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1553 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1555 * f_gap_low[gap_start+num_gaps] = f_high * f_gap_high[gap_start+num_gaps] = f_back_high * num_gaps = num_gaps + 1 # <<<<<<<<<<<<<< @@ -52817,7 +52864,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_num_gaps = (__pyx_v_num_gaps + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1554 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1556 * f_gap_high[gap_start+num_gaps] = f_back_high * num_gaps = num_gaps + 1 * phrase_len = phrase_len+1 # <<<<<<<<<<<<<< @@ -52826,7 +52873,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_phrase_len = (__pyx_v_phrase_len + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1555 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1557 * num_gaps = num_gaps + 1 * phrase_len = phrase_len+1 * if phrase_len > self.max_length: # <<<<<<<<<<<<<< @@ -52836,7 +52883,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_7 = (__pyx_v_phrase_len > __pyx_v_self->max_length); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1556 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1558 * phrase_len = phrase_len+1 * if phrase_len > self.max_length: * gap_error = 1 # <<<<<<<<<<<<<< @@ -52848,7 +52895,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L43:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1557 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1559 * if phrase_len > self.max_length: * gap_error = 1 * if self.tight_phrases: # <<<<<<<<<<<<<< @@ -52857,7 +52904,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ if (__pyx_v_self->tight_phrases) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1558 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1560 * gap_error = 1 * if self.tight_phrases: * if f_links_low[f_back_high-1] == -1 or f_links_low[f_high] == -1: # <<<<<<<<<<<<<< @@ -52873,7 +52920,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1559 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1561 * if self.tight_phrases: * if f_links_low[f_back_high-1] == -1 or f_links_low[f_high] == -1: * gap_error = 1 # <<<<<<<<<<<<<< @@ -52882,7 +52929,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_gap_error = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1560 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1562 * if f_links_low[f_back_high-1] == -1 or f_links_low[f_high] == -1: * gap_error = 1 * reason_for_failure = "Inside edges of following subphrase are not tight" # <<<<<<<<<<<<<< @@ -52902,7 +52949,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1562 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1564 * reason_for_failure = "Inside edges of following subphrase are not tight" * else: * if self.tight_phrases and f_links_low[f_high-1] == -1: # <<<<<<<<<<<<<< @@ -52917,7 +52964,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1563 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1565 * else: * if self.tight_phrases and f_links_low[f_high-1] == -1: * met_constraints = 0 # <<<<<<<<<<<<<< @@ -52931,7 +52978,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L42:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1565 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1567 * met_constraints = 0 * * if gap_error == 0: # <<<<<<<<<<<<<< @@ -52941,7 +52988,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_7 = (__pyx_v_gap_error == 0); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1566 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1568 * * if gap_error == 0: * e_word_count = e_high - e_low # <<<<<<<<<<<<<< @@ -52950,7 +52997,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_e_word_count = (__pyx_v_e_high - __pyx_v_e_low); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1567 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1569 * if gap_error == 0: * e_word_count = e_high - e_low * for i from 0 <= i < num_gaps: # check integrity of subphrases # <<<<<<<<<<<<<< @@ -52960,17 +53007,17 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_3 = __pyx_v_num_gaps; for (__pyx_v_i = 0; __pyx_v_i < __pyx_t_3; __pyx_v_i++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1568 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1570 * e_word_count = e_high - e_low * for i from 0 <= i < num_gaps: # check integrity of subphrases * if self.find_fixpoint(f_gap_low[gap_start+i], f_gap_high[gap_start+i], # <<<<<<<<<<<<<< * f_links_low, f_links_high, e_links_low, e_links_high, * -1, -1, e_gap_low+gap_start+i, e_gap_high+gap_start+i, */ - __pyx_t_10 = PyInt_FromLong((__pyx_v_f_gap_high[(__pyx_v_gap_start + __pyx_v_i)])); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1568; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyInt_FromLong((__pyx_v_f_gap_high[(__pyx_v_gap_start + __pyx_v_i)])); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1570; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1573 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1575 * f_gap_low+gap_start+i, f_gap_high+gap_start+i, * f_sent_len, e_sent_len, * self.train_max_initial_size, self.train_max_initial_size, # <<<<<<<<<<<<<< @@ -52981,7 +53028,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1575 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1577 * self.train_max_initial_size, self.train_max_initial_size, * 0, 0, 0, 0, 0, 0, 0) == 0: * gap_error = 1 # <<<<<<<<<<<<<< @@ -52990,18 +53037,18 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_gap_error = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1576 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1578 * 0, 0, 0, 0, 0, 0, 0) == 0: * gap_error = 1 * reason_for_failure = "Subphrase [%d, %d] failed integrity check" % (f_gap_low[gap_start+i], f_gap_high[gap_start+i]) # <<<<<<<<<<<<<< * break * */ - __pyx_t_10 = PyInt_FromLong((__pyx_v_f_gap_low[(__pyx_v_gap_start + __pyx_v_i)])); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1576; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyInt_FromLong((__pyx_v_f_gap_low[(__pyx_v_gap_start + __pyx_v_i)])); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1578; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); - __pyx_t_1 = PyInt_FromLong((__pyx_v_f_gap_high[(__pyx_v_gap_start + __pyx_v_i)])); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1576; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyInt_FromLong((__pyx_v_f_gap_high[(__pyx_v_gap_start + __pyx_v_i)])); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1578; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_2 = PyTuple_New(2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1576; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyTuple_New(2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1578; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); PyTuple_SET_ITEM(__pyx_t_2, 0, __pyx_t_10); __Pyx_GIVEREF(__pyx_t_10); @@ -53009,14 +53056,14 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_GIVEREF(__pyx_t_1); __pyx_t_10 = 0; __pyx_t_1 = 0; - __pyx_t_1 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_131), ((PyObject *)__pyx_t_2)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1576; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_131), ((PyObject *)__pyx_t_2)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1578; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_1)); __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_v_reason_for_failure); __pyx_v_reason_for_failure = ((PyObject *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1577 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1579 * gap_error = 1 * reason_for_failure = "Subphrase [%d, %d] failed integrity check" % (f_gap_low[gap_start+i], f_gap_high[gap_start+i]) * break # <<<<<<<<<<<<<< @@ -53033,7 +53080,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L47:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1579 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1581 * break * * if gap_error == 0: # <<<<<<<<<<<<<< @@ -53043,7 +53090,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_7 = (__pyx_v_gap_error == 0); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1580 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1582 * * if gap_error == 0: * i = 1 # <<<<<<<<<<<<<< @@ -53052,21 +53099,21 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_i = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1581 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1583 * if gap_error == 0: * i = 1 * self.findexes.reset() # <<<<<<<<<<<<<< * if f_back_low < f_low: * fphr_arr._append(sym_setindex(self.category, i)) */ - __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes), __pyx_n_s__reset); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1581; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes), __pyx_n_s__reset); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1583; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_2 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1581; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1583; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1582 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1584 * i = 1 * self.findexes.reset() * if f_back_low < f_low: # <<<<<<<<<<<<<< @@ -53076,7 +53123,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_7 = (__pyx_v_f_back_low < __pyx_v_f_low); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1583 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1585 * self.findexes.reset() * if f_back_low < f_low: * fphr_arr._append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< @@ -53085,7 +53132,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_fphr_arr->__pyx_vtab)->_append(__pyx_v_fphr_arr, __pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1584 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1586 * if f_back_low < f_low: * fphr_arr._append(sym_setindex(self.category, i)) * i = i+1 # <<<<<<<<<<<<<< @@ -53094,16 +53141,16 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_i = (__pyx_v_i + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1585 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1587 * fphr_arr._append(sym_setindex(self.category, i)) * i = i+1 * self.findexes.append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< * self.findexes.extend(self.findexes1) * for j from 0 <= j < phrase.n: */ - __pyx_t_2 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1585; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1587; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_1 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes), __pyx_t_2); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1585; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes), __pyx_t_2); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1587; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; @@ -53111,27 +53158,27 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L52:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1586 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1588 * i = i+1 * self.findexes.append(sym_setindex(self.category, i)) * self.findexes.extend(self.findexes1) # <<<<<<<<<<<<<< * for j from 0 <= j < phrase.n: * if sym_isvar(phrase.syms[j]): */ - __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes), __pyx_n_s__extend); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1586; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes), __pyx_n_s__extend); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1588; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_2 = PyTuple_New(1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1586; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyTuple_New(1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1588; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_INCREF(((PyObject *)__pyx_v_self->findexes1)); PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_v_self->findexes1)); __Pyx_GIVEREF(((PyObject *)__pyx_v_self->findexes1)); - __pyx_t_10 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1586; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1588; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1587 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1589 * self.findexes.append(sym_setindex(self.category, i)) * self.findexes.extend(self.findexes1) * for j from 0 <= j < phrase.n: # <<<<<<<<<<<<<< @@ -53141,7 +53188,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_3 = __pyx_v_phrase->n; for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_3; __pyx_v_j++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1588 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1590 * self.findexes.extend(self.findexes1) * for j from 0 <= j < phrase.n: * if sym_isvar(phrase.syms[j]): # <<<<<<<<<<<<<< @@ -53151,7 +53198,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_4 = __pyx_f_3_sa_sym_isvar((__pyx_v_phrase->syms[__pyx_v_j])); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1589 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1591 * for j from 0 <= j < phrase.n: * if sym_isvar(phrase.syms[j]): * fphr_arr._append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< @@ -53160,7 +53207,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_fphr_arr->__pyx_vtab)->_append(__pyx_v_fphr_arr, __pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1590 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1592 * if sym_isvar(phrase.syms[j]): * fphr_arr._append(sym_setindex(self.category, i)) * i = i + 1 # <<<<<<<<<<<<<< @@ -53172,7 +53219,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1592 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1594 * i = i + 1 * else: * fphr_arr._append(phrase.syms[j]) # <<<<<<<<<<<<<< @@ -53184,7 +53231,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_L55:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1593 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1595 * else: * fphr_arr._append(phrase.syms[j]) * if f_back_high > f_high: # <<<<<<<<<<<<<< @@ -53194,7 +53241,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_7 = (__pyx_v_f_back_high > __pyx_v_f_high); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1594 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1596 * fphr_arr._append(phrase.syms[j]) * if f_back_high > f_high: * fphr_arr._append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< @@ -53203,16 +53250,16 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_fphr_arr->__pyx_vtab)->_append(__pyx_v_fphr_arr, __pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1595 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1597 * if f_back_high > f_high: * fphr_arr._append(sym_setindex(self.category, i)) * self.findexes.append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< * * fphr = Phrase(fphr_arr) */ - __pyx_t_10 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1595; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1597; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); - __pyx_t_2 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes), __pyx_t_10); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1595; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes), __pyx_t_10); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1597; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; @@ -53220,25 +53267,25 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L56:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1597 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1599 * self.findexes.append(sym_setindex(self.category, i)) * * fphr = Phrase(fphr_arr) # <<<<<<<<<<<<<< * if met_constraints: * phrase_list = self.extract_phrases(e_low, e_high, e_gap_low + gap_start, e_gap_high + gap_start, e_links_low, num_gaps, */ - __pyx_t_2 = PyTuple_New(1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1597; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyTuple_New(1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1599; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_INCREF(((PyObject *)__pyx_v_fphr_arr)); PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_v_fphr_arr)); __Pyx_GIVEREF(((PyObject *)__pyx_v_fphr_arr)); - __pyx_t_10 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_Phrase)), ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1597; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_Phrase)), ((PyObject *)__pyx_t_2), NULL); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1599; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); __Pyx_DECREF(((PyObject *)__pyx_t_2)); __pyx_t_2 = 0; __pyx_v_fphr = ((struct __pyx_obj_3_sa_Phrase *)__pyx_t_10); __pyx_t_10 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1598 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1600 * * fphr = Phrase(fphr_arr) * if met_constraints: # <<<<<<<<<<<<<< @@ -53247,47 +53294,47 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ if (__pyx_v_met_constraints) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1601 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1603 * phrase_list = self.extract_phrases(e_low, e_high, e_gap_low + gap_start, e_gap_high + gap_start, e_links_low, num_gaps, * f_back_low, f_back_high, f_gap_low + gap_start, f_gap_high + gap_start, f_links_low, * matching.sent_id, e_sent_len, e_sent_start) # <<<<<<<<<<<<<< * if len(phrase_list) > 0: * pair_count = 1.0 / len(phrase_list) */ - __pyx_t_10 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->extract_phrases(__pyx_v_self, __pyx_v_e_low, __pyx_v_e_high, (__pyx_v_e_gap_low + __pyx_v_gap_start), (__pyx_v_e_gap_high + __pyx_v_gap_start), __pyx_v_e_links_low, __pyx_v_num_gaps, __pyx_v_f_back_low, __pyx_v_f_back_high, (__pyx_v_f_gap_low + __pyx_v_gap_start), (__pyx_v_f_gap_high + __pyx_v_gap_start), __pyx_v_f_links_low, __pyx_v_matching->sent_id, __pyx_v_e_sent_len, __pyx_v_e_sent_start); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1599; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->extract_phrases(__pyx_v_self, __pyx_v_e_low, __pyx_v_e_high, (__pyx_v_e_gap_low + __pyx_v_gap_start), (__pyx_v_e_gap_high + __pyx_v_gap_start), __pyx_v_e_links_low, __pyx_v_num_gaps, __pyx_v_f_back_low, __pyx_v_f_back_high, (__pyx_v_f_gap_low + __pyx_v_gap_start), (__pyx_v_f_gap_high + __pyx_v_gap_start), __pyx_v_f_links_low, __pyx_v_matching->sent_id, __pyx_v_e_sent_len, __pyx_v_e_sent_start); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1601; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); __pyx_v_phrase_list = __pyx_t_10; __pyx_t_10 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1602 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1604 * f_back_low, f_back_high, f_gap_low + gap_start, f_gap_high + gap_start, f_links_low, * matching.sent_id, e_sent_len, e_sent_start) * if len(phrase_list) > 0: # <<<<<<<<<<<<<< * pair_count = 1.0 / len(phrase_list) * else: */ - __pyx_t_13 = PyObject_Length(__pyx_v_phrase_list); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1602; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = PyObject_Length(__pyx_v_phrase_list); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1604; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_7 = (__pyx_t_13 > 0); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1603 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1605 * matching.sent_id, e_sent_len, e_sent_start) * if len(phrase_list) > 0: * pair_count = 1.0 / len(phrase_list) # <<<<<<<<<<<<<< * else: * pair_count = 0 */ - __pyx_t_13 = PyObject_Length(__pyx_v_phrase_list); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1603; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = PyObject_Length(__pyx_v_phrase_list); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1605; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (unlikely(__pyx_t_13 == 0)) { PyErr_Format(PyExc_ZeroDivisionError, "float division"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1603; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1605; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_v_pair_count = (1.0 / __pyx_t_13); goto __pyx_L58; } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1605 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1607 * pair_count = 1.0 / len(phrase_list) * else: * pair_count = 0 # <<<<<<<<<<<<<< @@ -53296,22 +53343,22 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_pair_count = 0.0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1606 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1608 * else: * pair_count = 0 * reason_for_failure = "Didn't extract anything from [%d, %d] -> [%d, %d]" % (f_back_low, f_back_high, e_low, e_high) # <<<<<<<<<<<<<< * for (phrase2,eindexes) in phrase_list: * als1 = self.create_alignments(sent_links,num_links,self.findexes,eindexes) */ - __pyx_t_10 = PyInt_FromLong(__pyx_v_f_back_low); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1606; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyInt_FromLong(__pyx_v_f_back_low); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1608; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); - __pyx_t_2 = PyInt_FromLong(__pyx_v_f_back_high); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1606; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyInt_FromLong(__pyx_v_f_back_high); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1608; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_1 = PyInt_FromLong(__pyx_v_e_low); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1606; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyInt_FromLong(__pyx_v_e_low); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1608; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_14 = PyInt_FromLong(__pyx_v_e_high); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1606; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyInt_FromLong(__pyx_v_e_high); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1608; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); - __pyx_t_15 = PyTuple_New(4); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1606; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyTuple_New(4); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1608; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); PyTuple_SET_ITEM(__pyx_t_15, 0, __pyx_t_10); __Pyx_GIVEREF(__pyx_t_10); @@ -53325,7 +53372,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_2 = 0; __pyx_t_1 = 0; __pyx_t_14 = 0; - __pyx_t_14 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_132), ((PyObject *)__pyx_t_15)); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1606; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_132), ((PyObject *)__pyx_t_15)); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1608; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_14)); __Pyx_DECREF(((PyObject *)__pyx_t_15)); __pyx_t_15 = 0; __Pyx_DECREF(__pyx_v_reason_for_failure); @@ -53334,7 +53381,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L58:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1607 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1609 * pair_count = 0 * reason_for_failure = "Didn't extract anything from [%d, %d] -> [%d, %d]" % (f_back_low, f_back_high, e_low, e_high) * for (phrase2,eindexes) in phrase_list: # <<<<<<<<<<<<<< @@ -53345,7 +53392,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_14 = __pyx_v_phrase_list; __Pyx_INCREF(__pyx_t_14); __pyx_t_13 = 0; __pyx_t_16 = NULL; } else { - __pyx_t_13 = -1; __pyx_t_14 = PyObject_GetIter(__pyx_v_phrase_list); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1607; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = -1; __pyx_t_14 = PyObject_GetIter(__pyx_v_phrase_list); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); __pyx_t_16 = Py_TYPE(__pyx_t_14)->tp_iternext; } @@ -53353,23 +53400,23 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj if (!__pyx_t_16 && PyList_CheckExact(__pyx_t_14)) { if (__pyx_t_13 >= PyList_GET_SIZE(__pyx_t_14)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_15 = PyList_GET_ITEM(__pyx_t_14, __pyx_t_13); __Pyx_INCREF(__pyx_t_15); __pyx_t_13++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1607; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyList_GET_ITEM(__pyx_t_14, __pyx_t_13); __Pyx_INCREF(__pyx_t_15); __pyx_t_13++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_15 = PySequence_ITEM(__pyx_t_14, __pyx_t_13); __pyx_t_13++; if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1607; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PySequence_ITEM(__pyx_t_14, __pyx_t_13); __pyx_t_13++; if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else if (!__pyx_t_16 && PyTuple_CheckExact(__pyx_t_14)) { if (__pyx_t_13 >= PyTuple_GET_SIZE(__pyx_t_14)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_15 = PyTuple_GET_ITEM(__pyx_t_14, __pyx_t_13); __Pyx_INCREF(__pyx_t_15); __pyx_t_13++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1607; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyTuple_GET_ITEM(__pyx_t_14, __pyx_t_13); __Pyx_INCREF(__pyx_t_15); __pyx_t_13++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_15 = PySequence_ITEM(__pyx_t_14, __pyx_t_13); __pyx_t_13++; if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1607; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PySequence_ITEM(__pyx_t_14, __pyx_t_13); __pyx_t_13++; if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else { __pyx_t_15 = __pyx_t_16(__pyx_t_14); if (unlikely(!__pyx_t_15)) { if (PyErr_Occurred()) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1607; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } break; } @@ -53385,7 +53432,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj if (unlikely(size != 2)) { if (size > 2) __Pyx_RaiseTooManyValuesError(2); else if (size >= 0) __Pyx_RaiseNeedMoreValuesError(size); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1607; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } #if CYTHON_COMPILING_IN_CPYTHON if (likely(PyTuple_CheckExact(sequence))) { @@ -53398,14 +53445,14 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_INCREF(__pyx_t_1); __Pyx_INCREF(__pyx_t_2); #else - __pyx_t_1 = PySequence_ITEM(sequence, 0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1607; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_2 = PySequence_ITEM(sequence, 1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1607; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PySequence_ITEM(sequence, 0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PySequence_ITEM(sequence, 1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; } else { Py_ssize_t index = -1; - __pyx_t_10 = PyObject_GetIter(__pyx_t_15); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1607; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyObject_GetIter(__pyx_t_15); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; __pyx_t_17 = Py_TYPE(__pyx_t_10)->tp_iternext; @@ -53413,7 +53460,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_GOTREF(__pyx_t_1); index = 1; __pyx_t_2 = __pyx_t_17(__pyx_t_10); if (unlikely(!__pyx_t_2)) goto __pyx_L61_unpacking_failed; __Pyx_GOTREF(__pyx_t_2); - if (__Pyx_IternextUnpackEndCheck(__pyx_t_17(__pyx_t_10), 2) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1607; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_IternextUnpackEndCheck(__pyx_t_17(__pyx_t_10), 2) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_17 = NULL; __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; goto __pyx_L62_unpacking_done; @@ -53421,7 +53468,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; __pyx_t_17 = NULL; if (__Pyx_IterFinish() == 0) __Pyx_RaiseNeedMoreValuesError(index); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1607; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_L62_unpacking_done:; } __Pyx_XDECREF(__pyx_v_phrase2); @@ -53431,7 +53478,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_v_eindexes = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1608 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1610 * reason_for_failure = "Didn't extract anything from [%d, %d] -> [%d, %d]" % (f_back_low, f_back_high, e_low, e_high) * for (phrase2,eindexes) in phrase_list: * als1 = self.create_alignments(sent_links,num_links,self.findexes,eindexes) # <<<<<<<<<<<<<< @@ -53440,31 +53487,31 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_t_15 = ((PyObject *)__pyx_v_self->findexes); __Pyx_INCREF(__pyx_t_15); - __pyx_t_2 = ((PyObject *)((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->create_alignments(__pyx_v_self, __pyx_v_sent_links, __pyx_v_num_links, __pyx_t_15, __pyx_v_eindexes)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1608; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = ((PyObject *)((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->create_alignments(__pyx_v_self, __pyx_v_sent_links, __pyx_v_num_links, __pyx_t_15, __pyx_v_eindexes)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1610; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; __Pyx_XDECREF(((PyObject *)__pyx_v_als1)); __pyx_v_als1 = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1609 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1611 * for (phrase2,eindexes) in phrase_list: * als1 = self.create_alignments(sent_links,num_links,self.findexes,eindexes) * extracts.append((fphr, phrase2, pair_count, tuple(als1))) # <<<<<<<<<<<<<< * * if (num_gaps < self.max_nonterminals and */ - __pyx_t_2 = PyFloat_FromDouble(__pyx_v_pair_count); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyFloat_FromDouble(__pyx_v_pair_count); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1611; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_15 = PyTuple_New(1); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyTuple_New(1); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1611; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_INCREF(((PyObject *)__pyx_v_als1)); PyTuple_SET_ITEM(__pyx_t_15, 0, ((PyObject *)__pyx_v_als1)); __Pyx_GIVEREF(((PyObject *)__pyx_v_als1)); - __pyx_t_1 = PyObject_Call(((PyObject *)((PyObject*)(&PyTuple_Type))), ((PyObject *)__pyx_t_15), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_Call(((PyObject *)((PyObject*)(&PyTuple_Type))), ((PyObject *)__pyx_t_15), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1611; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(((PyObject *)__pyx_t_15)); __pyx_t_15 = 0; - __pyx_t_15 = PyTuple_New(4); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyTuple_New(4); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1611; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_INCREF(((PyObject *)__pyx_v_fphr)); PyTuple_SET_ITEM(__pyx_t_15, 0, ((PyObject *)__pyx_v_fphr)); @@ -53478,7 +53525,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_GIVEREF(__pyx_t_1); __pyx_t_2 = 0; __pyx_t_1 = 0; - __pyx_t_1 = __Pyx_PyObject_Append(__pyx_v_extracts, ((PyObject *)__pyx_t_15)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1609; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_Append(__pyx_v_extracts, ((PyObject *)__pyx_t_15)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1611; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(((PyObject *)__pyx_t_15)); __pyx_t_15 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; @@ -53488,7 +53535,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L57:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1611 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1613 * extracts.append((fphr, phrase2, pair_count, tuple(als1))) * * if (num_gaps < self.max_nonterminals and # <<<<<<<<<<<<<< @@ -53498,7 +53545,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_7 = (__pyx_v_num_gaps < __pyx_v_self->max_nonterminals); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1612 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1614 * * if (num_gaps < self.max_nonterminals and * phrase_len < self.max_length and # <<<<<<<<<<<<<< @@ -53508,7 +53555,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_9 = (__pyx_v_phrase_len < __pyx_v_self->max_length); if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1613 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1615 * if (num_gaps < self.max_nonterminals and * phrase_len < self.max_length and * f_back_high - f_back_low + self.train_min_gap_size <= self.train_max_initial_size): # <<<<<<<<<<<<<< @@ -53526,7 +53573,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1614 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1616 * phrase_len < self.max_length and * f_back_high - f_back_low + self.train_min_gap_size <= self.train_max_initial_size): * if (f_back_low == f_low and # <<<<<<<<<<<<<< @@ -53536,7 +53583,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_9 = (__pyx_v_f_back_low == __pyx_v_f_low); if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1615 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1617 * f_back_high - f_back_low + self.train_min_gap_size <= self.train_max_initial_size): * if (f_back_low == f_low and * f_low >= self.train_min_gap_size and # <<<<<<<<<<<<<< @@ -53546,7 +53593,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_7 = (__pyx_v_f_low >= __pyx_v_self->train_min_gap_size); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1616 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1618 * if (f_back_low == f_low and * f_low >= self.train_min_gap_size and * ((not self.tight_phrases) or (f_links_low[f_low-1] != -1 and f_links_low[f_back_high-1] != -1))): # <<<<<<<<<<<<<< @@ -53576,7 +53623,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1617 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1619 * f_low >= self.train_min_gap_size and * ((not self.tight_phrases) or (f_links_low[f_low-1] != -1 and f_links_low[f_back_high-1] != -1))): * f_x_low = f_low-self.train_min_gap_size # <<<<<<<<<<<<<< @@ -53585,7 +53632,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_f_x_low = (__pyx_v_f_low - __pyx_v_self->train_min_gap_size); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1618 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1620 * ((not self.tight_phrases) or (f_links_low[f_low-1] != -1 and f_links_low[f_back_high-1] != -1))): * f_x_low = f_low-self.train_min_gap_size * met_constraints = 1 # <<<<<<<<<<<<<< @@ -53594,7 +53641,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_met_constraints = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1619 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1621 * f_x_low = f_low-self.train_min_gap_size * met_constraints = 1 * if self.tight_phrases: # <<<<<<<<<<<<<< @@ -53603,7 +53650,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ if (__pyx_v_self->tight_phrases) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1620 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1622 * met_constraints = 1 * if self.tight_phrases: * while f_x_low >= 0 and f_links_low[f_x_low] == -1: # <<<<<<<<<<<<<< @@ -53620,7 +53667,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (!__pyx_t_18) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1621 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1623 * if self.tight_phrases: * while f_x_low >= 0 and f_links_low[f_x_low] == -1: * f_x_low = f_x_low - 1 # <<<<<<<<<<<<<< @@ -53633,7 +53680,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L65:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1622 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1624 * while f_x_low >= 0 and f_links_low[f_x_low] == -1: * f_x_low = f_x_low - 1 * if f_x_low < 0 or f_back_high - f_x_low > self.train_max_initial_size: # <<<<<<<<<<<<<< @@ -53649,7 +53696,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1623 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1625 * f_x_low = f_x_low - 1 * if f_x_low < 0 or f_back_high - f_x_low > self.train_max_initial_size: * met_constraints = 0 # <<<<<<<<<<<<<< @@ -53661,7 +53708,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L68:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1625 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1627 * met_constraints = 0 * * if (met_constraints and # <<<<<<<<<<<<<< @@ -53670,17 +53717,17 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ if (__pyx_v_met_constraints) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1626 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1628 * * if (met_constraints and * self.find_fixpoint(f_x_low, f_back_high, # <<<<<<<<<<<<<< * f_links_low, f_links_high, e_links_low, e_links_high, * e_low, e_high, &e_x_low, &e_x_high, &f_x_low, &f_x_high, */ - __pyx_t_14 = PyInt_FromLong(__pyx_v_f_back_high); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1626; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyInt_FromLong(__pyx_v_f_back_high); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1628; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1630 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1632 * e_low, e_high, &e_x_low, &e_x_high, &f_x_low, &f_x_high, * f_sent_len, e_sent_len, * self.train_max_initial_size, self.train_max_initial_size, # <<<<<<<<<<<<<< @@ -53690,7 +53737,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj if (((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->find_fixpoint(__pyx_v_self, __pyx_v_f_x_low, __pyx_t_14, __pyx_v_f_links_low, __pyx_v_f_links_high, __pyx_v_e_links_low, __pyx_v_e_links_high, __pyx_v_e_low, __pyx_v_e_high, (&__pyx_v_e_x_low), (&__pyx_v_e_x_high), (&__pyx_v_f_x_low), (&__pyx_v_f_x_high), __pyx_v_f_sent_len, __pyx_v_e_sent_len, __pyx_v_self->train_max_initial_size, __pyx_v_self->train_max_initial_size, 1, 1, 1, 1, 0, 1, 0)) { __Pyx_DECREF(__pyx_t_14); __pyx_t_14 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1632 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1634 * self.train_max_initial_size, self.train_max_initial_size, * 1, 1, 1, 1, 0, 1, 0) and * ((not self.tight_phrases) or f_links_low[f_x_low] != -1) and # <<<<<<<<<<<<<< @@ -53706,17 +53753,17 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1633 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1635 * 1, 1, 1, 1, 0, 1, 0) and * ((not self.tight_phrases) or f_links_low[f_x_low] != -1) and * self.find_fixpoint(f_x_low, f_low, # check integrity of new subphrase # <<<<<<<<<<<<<< * f_links_low, f_links_high, e_links_low, e_links_high, * -1, -1, e_gap_low, e_gap_high, f_gap_low, f_gap_high, */ - __pyx_t_1 = PyInt_FromLong(__pyx_v_f_low); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1633; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyInt_FromLong(__pyx_v_f_low); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1635; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1637 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1639 * -1, -1, e_gap_low, e_gap_high, f_gap_low, f_gap_high, * f_sent_len, e_sent_len, * self.train_max_initial_size, self.train_max_initial_size, # <<<<<<<<<<<<<< @@ -53739,7 +53786,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1639 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1641 * self.train_max_initial_size, self.train_max_initial_size, * 0, 0, 0, 0, 0, 0, 0)): * fphr_arr._clear() # <<<<<<<<<<<<<< @@ -53748,7 +53795,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_fphr_arr->__pyx_vtab)->_clear(__pyx_v_fphr_arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1640 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1642 * 0, 0, 0, 0, 0, 0, 0)): * fphr_arr._clear() * i = 1 # <<<<<<<<<<<<<< @@ -53757,35 +53804,35 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_i = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1641 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1643 * fphr_arr._clear() * i = 1 * self.findexes.reset() # <<<<<<<<<<<<<< * self.findexes.append(sym_setindex(self.category, i)) * fphr_arr._append(sym_setindex(self.category, i)) */ - __pyx_t_14 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes), __pyx_n_s__reset); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1641; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes), __pyx_n_s__reset); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1643; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); - __pyx_t_1 = PyObject_Call(__pyx_t_14, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1641; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_Call(__pyx_t_14, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1643; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_t_14); __pyx_t_14 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1642 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1644 * i = 1 * self.findexes.reset() * self.findexes.append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< * fphr_arr._append(sym_setindex(self.category, i)) * i = i+1 */ - __pyx_t_1 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1642; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1644; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_14 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes), __pyx_t_1); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1642; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes), __pyx_t_1); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1644; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_14); __pyx_t_14 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1643 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1645 * self.findexes.reset() * self.findexes.append(sym_setindex(self.category, i)) * fphr_arr._append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< @@ -53794,7 +53841,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_fphr_arr->__pyx_vtab)->_append(__pyx_v_fphr_arr, __pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1644 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1646 * self.findexes.append(sym_setindex(self.category, i)) * fphr_arr._append(sym_setindex(self.category, i)) * i = i+1 # <<<<<<<<<<<<<< @@ -53803,27 +53850,27 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_i = (__pyx_v_i + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1645 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1647 * fphr_arr._append(sym_setindex(self.category, i)) * i = i+1 * self.findexes.extend(self.findexes1) # <<<<<<<<<<<<<< * for j from 0 <= j < phrase.n: * if sym_isvar(phrase.syms[j]): */ - __pyx_t_14 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes), __pyx_n_s__extend); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1645; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes), __pyx_n_s__extend); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1647; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); - __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1645; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1647; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_INCREF(((PyObject *)__pyx_v_self->findexes1)); PyTuple_SET_ITEM(__pyx_t_1, 0, ((PyObject *)__pyx_v_self->findexes1)); __Pyx_GIVEREF(((PyObject *)__pyx_v_self->findexes1)); - __pyx_t_15 = PyObject_Call(__pyx_t_14, ((PyObject *)__pyx_t_1), NULL); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1645; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyObject_Call(__pyx_t_14, ((PyObject *)__pyx_t_1), NULL); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1647; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_DECREF(__pyx_t_14); __pyx_t_14 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1646 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1648 * i = i+1 * self.findexes.extend(self.findexes1) * for j from 0 <= j < phrase.n: # <<<<<<<<<<<<<< @@ -53833,7 +53880,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_3 = __pyx_v_phrase->n; for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_3; __pyx_v_j++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1647 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1649 * self.findexes.extend(self.findexes1) * for j from 0 <= j < phrase.n: * if sym_isvar(phrase.syms[j]): # <<<<<<<<<<<<<< @@ -53843,7 +53890,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_4 = __pyx_f_3_sa_sym_isvar((__pyx_v_phrase->syms[__pyx_v_j])); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1648 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1650 * for j from 0 <= j < phrase.n: * if sym_isvar(phrase.syms[j]): * fphr_arr._append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< @@ -53852,7 +53899,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_fphr_arr->__pyx_vtab)->_append(__pyx_v_fphr_arr, __pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1649 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1651 * if sym_isvar(phrase.syms[j]): * fphr_arr._append(sym_setindex(self.category, i)) * i = i + 1 # <<<<<<<<<<<<<< @@ -53864,7 +53911,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1651 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1653 * i = i + 1 * else: * fphr_arr._append(phrase.syms[j]) # <<<<<<<<<<<<<< @@ -53876,7 +53923,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_L72:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1652 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1654 * else: * fphr_arr._append(phrase.syms[j]) * if f_back_high > f_high: # <<<<<<<<<<<<<< @@ -53886,7 +53933,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_9 = (__pyx_v_f_back_high > __pyx_v_f_high); if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1653 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1655 * fphr_arr._append(phrase.syms[j]) * if f_back_high > f_high: * fphr_arr._append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< @@ -53895,16 +53942,16 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_fphr_arr->__pyx_vtab)->_append(__pyx_v_fphr_arr, __pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1654 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1656 * if f_back_high > f_high: * fphr_arr._append(sym_setindex(self.category, i)) * self.findexes.append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< * fphr = Phrase(fphr_arr) * phrase_list = self.extract_phrases(e_x_low, e_x_high, e_gap_low, e_gap_high, e_links_low, num_gaps+1, */ - __pyx_t_15 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1654; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1656; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); - __pyx_t_1 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes), __pyx_t_15); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1654; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes), __pyx_t_15); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1656; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; @@ -53912,67 +53959,67 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L73:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1655 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1657 * fphr_arr._append(sym_setindex(self.category, i)) * self.findexes.append(sym_setindex(self.category, i)) * fphr = Phrase(fphr_arr) # <<<<<<<<<<<<<< * phrase_list = self.extract_phrases(e_x_low, e_x_high, e_gap_low, e_gap_high, e_links_low, num_gaps+1, * f_x_low, f_x_high, f_gap_low, f_gap_high, f_links_low, matching.sent_id, */ - __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1655; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1657; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_INCREF(((PyObject *)__pyx_v_fphr_arr)); PyTuple_SET_ITEM(__pyx_t_1, 0, ((PyObject *)__pyx_v_fphr_arr)); __Pyx_GIVEREF(((PyObject *)__pyx_v_fphr_arr)); - __pyx_t_15 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_Phrase)), ((PyObject *)__pyx_t_1), NULL); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1655; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_Phrase)), ((PyObject *)__pyx_t_1), NULL); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1657; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; __Pyx_DECREF(((PyObject *)__pyx_v_fphr)); __pyx_v_fphr = ((struct __pyx_obj_3_sa_Phrase *)__pyx_t_15); __pyx_t_15 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1658 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1660 * phrase_list = self.extract_phrases(e_x_low, e_x_high, e_gap_low, e_gap_high, e_links_low, num_gaps+1, * f_x_low, f_x_high, f_gap_low, f_gap_high, f_links_low, matching.sent_id, * e_sent_len, e_sent_start) # <<<<<<<<<<<<<< * if len(phrase_list) > 0: * pair_count = 1.0 / len(phrase_list) */ - __pyx_t_15 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->extract_phrases(__pyx_v_self, __pyx_v_e_x_low, __pyx_v_e_x_high, __pyx_v_e_gap_low, __pyx_v_e_gap_high, __pyx_v_e_links_low, (__pyx_v_num_gaps + 1), __pyx_v_f_x_low, __pyx_v_f_x_high, __pyx_v_f_gap_low, __pyx_v_f_gap_high, __pyx_v_f_links_low, __pyx_v_matching->sent_id, __pyx_v_e_sent_len, __pyx_v_e_sent_start); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1656; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->extract_phrases(__pyx_v_self, __pyx_v_e_x_low, __pyx_v_e_x_high, __pyx_v_e_gap_low, __pyx_v_e_gap_high, __pyx_v_e_links_low, (__pyx_v_num_gaps + 1), __pyx_v_f_x_low, __pyx_v_f_x_high, __pyx_v_f_gap_low, __pyx_v_f_gap_high, __pyx_v_f_links_low, __pyx_v_matching->sent_id, __pyx_v_e_sent_len, __pyx_v_e_sent_start); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1658; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_XDECREF(__pyx_v_phrase_list); __pyx_v_phrase_list = __pyx_t_15; __pyx_t_15 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1659 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1661 * f_x_low, f_x_high, f_gap_low, f_gap_high, f_links_low, matching.sent_id, * e_sent_len, e_sent_start) * if len(phrase_list) > 0: # <<<<<<<<<<<<<< * pair_count = 1.0 / len(phrase_list) * else: */ - __pyx_t_13 = PyObject_Length(__pyx_v_phrase_list); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1659; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = PyObject_Length(__pyx_v_phrase_list); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1661; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_9 = (__pyx_t_13 > 0); if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1660 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1662 * e_sent_len, e_sent_start) * if len(phrase_list) > 0: * pair_count = 1.0 / len(phrase_list) # <<<<<<<<<<<<<< * else: * pair_count = 0 */ - __pyx_t_13 = PyObject_Length(__pyx_v_phrase_list); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1660; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = PyObject_Length(__pyx_v_phrase_list); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1662; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (unlikely(__pyx_t_13 == 0)) { PyErr_Format(PyExc_ZeroDivisionError, "float division"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1660; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1662; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_v_pair_count = (1.0 / __pyx_t_13); goto __pyx_L74; } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1662 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1664 * pair_count = 1.0 / len(phrase_list) * else: * pair_count = 0 # <<<<<<<<<<<<<< @@ -53983,7 +54030,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L74:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1663 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1665 * else: * pair_count = 0 * for phrase2,eindexes in phrase_list: # <<<<<<<<<<<<<< @@ -53994,7 +54041,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_15 = __pyx_v_phrase_list; __Pyx_INCREF(__pyx_t_15); __pyx_t_13 = 0; __pyx_t_16 = NULL; } else { - __pyx_t_13 = -1; __pyx_t_15 = PyObject_GetIter(__pyx_v_phrase_list); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1663; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = -1; __pyx_t_15 = PyObject_GetIter(__pyx_v_phrase_list); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __pyx_t_16 = Py_TYPE(__pyx_t_15)->tp_iternext; } @@ -54002,23 +54049,23 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj if (!__pyx_t_16 && PyList_CheckExact(__pyx_t_15)) { if (__pyx_t_13 >= PyList_GET_SIZE(__pyx_t_15)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_1 = PyList_GET_ITEM(__pyx_t_15, __pyx_t_13); __Pyx_INCREF(__pyx_t_1); __pyx_t_13++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1663; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyList_GET_ITEM(__pyx_t_15, __pyx_t_13); __Pyx_INCREF(__pyx_t_1); __pyx_t_13++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_1 = PySequence_ITEM(__pyx_t_15, __pyx_t_13); __pyx_t_13++; if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1663; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PySequence_ITEM(__pyx_t_15, __pyx_t_13); __pyx_t_13++; if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else if (!__pyx_t_16 && PyTuple_CheckExact(__pyx_t_15)) { if (__pyx_t_13 >= PyTuple_GET_SIZE(__pyx_t_15)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_1 = PyTuple_GET_ITEM(__pyx_t_15, __pyx_t_13); __Pyx_INCREF(__pyx_t_1); __pyx_t_13++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1663; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyTuple_GET_ITEM(__pyx_t_15, __pyx_t_13); __Pyx_INCREF(__pyx_t_1); __pyx_t_13++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_1 = PySequence_ITEM(__pyx_t_15, __pyx_t_13); __pyx_t_13++; if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1663; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PySequence_ITEM(__pyx_t_15, __pyx_t_13); __pyx_t_13++; if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else { __pyx_t_1 = __pyx_t_16(__pyx_t_15); if (unlikely(!__pyx_t_1)) { if (PyErr_Occurred()) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1663; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } break; } @@ -54034,7 +54081,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj if (unlikely(size != 2)) { if (size > 2) __Pyx_RaiseTooManyValuesError(2); else if (size >= 0) __Pyx_RaiseNeedMoreValuesError(size); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1663; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } #if CYTHON_COMPILING_IN_CPYTHON if (likely(PyTuple_CheckExact(sequence))) { @@ -54047,14 +54094,14 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_INCREF(__pyx_t_14); __Pyx_INCREF(__pyx_t_2); #else - __pyx_t_14 = PySequence_ITEM(sequence, 0); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1663; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_2 = PySequence_ITEM(sequence, 1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1663; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PySequence_ITEM(sequence, 0); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PySequence_ITEM(sequence, 1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; } else { Py_ssize_t index = -1; - __pyx_t_10 = PyObject_GetIter(__pyx_t_1); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1663; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyObject_GetIter(__pyx_t_1); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_t_17 = Py_TYPE(__pyx_t_10)->tp_iternext; @@ -54062,7 +54109,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_GOTREF(__pyx_t_14); index = 1; __pyx_t_2 = __pyx_t_17(__pyx_t_10); if (unlikely(!__pyx_t_2)) goto __pyx_L77_unpacking_failed; __Pyx_GOTREF(__pyx_t_2); - if (__Pyx_IternextUnpackEndCheck(__pyx_t_17(__pyx_t_10), 2) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1663; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_IternextUnpackEndCheck(__pyx_t_17(__pyx_t_10), 2) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_17 = NULL; __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; goto __pyx_L78_unpacking_done; @@ -54070,7 +54117,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; __pyx_t_17 = NULL; if (__Pyx_IterFinish() == 0) __Pyx_RaiseNeedMoreValuesError(index); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1663; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_L78_unpacking_done:; } __Pyx_XDECREF(__pyx_v_phrase2); @@ -54080,7 +54127,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_v_eindexes = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1664 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1666 * pair_count = 0 * for phrase2,eindexes in phrase_list: * als2 = self.create_alignments(sent_links,num_links,self.findexes,eindexes) # <<<<<<<<<<<<<< @@ -54089,31 +54136,31 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_t_1 = ((PyObject *)__pyx_v_self->findexes); __Pyx_INCREF(__pyx_t_1); - __pyx_t_2 = ((PyObject *)((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->create_alignments(__pyx_v_self, __pyx_v_sent_links, __pyx_v_num_links, __pyx_t_1, __pyx_v_eindexes)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1664; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = ((PyObject *)((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->create_alignments(__pyx_v_self, __pyx_v_sent_links, __pyx_v_num_links, __pyx_t_1, __pyx_v_eindexes)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1666; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_XDECREF(((PyObject *)__pyx_v_als2)); __pyx_v_als2 = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1665 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1667 * for phrase2,eindexes in phrase_list: * als2 = self.create_alignments(sent_links,num_links,self.findexes,eindexes) * extracts.append((fphr, phrase2, pair_count, tuple(als2))) # <<<<<<<<<<<<<< * * if (f_back_high == f_high and */ - __pyx_t_2 = PyFloat_FromDouble(__pyx_v_pair_count); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyFloat_FromDouble(__pyx_v_pair_count); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1667; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1667; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_INCREF(((PyObject *)__pyx_v_als2)); PyTuple_SET_ITEM(__pyx_t_1, 0, ((PyObject *)__pyx_v_als2)); __Pyx_GIVEREF(((PyObject *)__pyx_v_als2)); - __pyx_t_14 = PyObject_Call(((PyObject *)((PyObject*)(&PyTuple_Type))), ((PyObject *)__pyx_t_1), NULL); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyObject_Call(((PyObject *)((PyObject*)(&PyTuple_Type))), ((PyObject *)__pyx_t_1), NULL); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1667; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; - __pyx_t_1 = PyTuple_New(4); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyTuple_New(4); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1667; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_INCREF(((PyObject *)__pyx_v_fphr)); PyTuple_SET_ITEM(__pyx_t_1, 0, ((PyObject *)__pyx_v_fphr)); @@ -54127,7 +54174,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_GIVEREF(__pyx_t_14); __pyx_t_2 = 0; __pyx_t_14 = 0; - __pyx_t_14 = __Pyx_PyObject_Append(__pyx_v_extracts, ((PyObject *)__pyx_t_1)); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1665; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = __Pyx_PyObject_Append(__pyx_v_extracts, ((PyObject *)__pyx_t_1)); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1667; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_14); __pyx_t_14 = 0; @@ -54140,7 +54187,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L64:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1667 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1669 * extracts.append((fphr, phrase2, pair_count, tuple(als2))) * * if (f_back_high == f_high and # <<<<<<<<<<<<<< @@ -54150,7 +54197,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_9 = (__pyx_v_f_back_high == __pyx_v_f_high); if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1668 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1670 * * if (f_back_high == f_high and * f_sent_len - f_high >= self.train_min_gap_size and # <<<<<<<<<<<<<< @@ -54160,7 +54207,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_7 = ((__pyx_v_f_sent_len - __pyx_v_f_high) >= __pyx_v_self->train_min_gap_size); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1669 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1671 * if (f_back_high == f_high and * f_sent_len - f_high >= self.train_min_gap_size and * ((not self.tight_phrases) or (f_links_low[f_high] != -1 and f_links_low[f_back_low] != -1))): # <<<<<<<<<<<<<< @@ -54190,7 +54237,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1670 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1672 * f_sent_len - f_high >= self.train_min_gap_size and * ((not self.tight_phrases) or (f_links_low[f_high] != -1 and f_links_low[f_back_low] != -1))): * f_x_high = f_high+self.train_min_gap_size # <<<<<<<<<<<<<< @@ -54199,7 +54246,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_f_x_high = (__pyx_v_f_high + __pyx_v_self->train_min_gap_size); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1671 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1673 * ((not self.tight_phrases) or (f_links_low[f_high] != -1 and f_links_low[f_back_low] != -1))): * f_x_high = f_high+self.train_min_gap_size * met_constraints = 1 # <<<<<<<<<<<<<< @@ -54208,7 +54255,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_met_constraints = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1672 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1674 * f_x_high = f_high+self.train_min_gap_size * met_constraints = 1 * if self.tight_phrases: # <<<<<<<<<<<<<< @@ -54217,7 +54264,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ if (__pyx_v_self->tight_phrases) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1673 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1675 * met_constraints = 1 * if self.tight_phrases: * while f_x_high <= f_sent_len and f_links_low[f_x_high-1] == -1: # <<<<<<<<<<<<<< @@ -54234,7 +54281,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (!__pyx_t_18) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1674 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1676 * if self.tight_phrases: * while f_x_high <= f_sent_len and f_links_low[f_x_high-1] == -1: * f_x_high = f_x_high + 1 # <<<<<<<<<<<<<< @@ -54247,7 +54294,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L80:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1675 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1677 * while f_x_high <= f_sent_len and f_links_low[f_x_high-1] == -1: * f_x_high = f_x_high + 1 * if f_x_high > f_sent_len or f_x_high - f_back_low > self.train_max_initial_size: # <<<<<<<<<<<<<< @@ -54263,7 +54310,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1676 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1678 * f_x_high = f_x_high + 1 * if f_x_high > f_sent_len or f_x_high - f_back_low > self.train_max_initial_size: * met_constraints = 0 # <<<<<<<<<<<<<< @@ -54275,7 +54322,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L83:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1678 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1680 * met_constraints = 0 * * if (met_constraints and # <<<<<<<<<<<<<< @@ -54284,17 +54331,17 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ if (__pyx_v_met_constraints) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1679 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1681 * * if (met_constraints and * self.find_fixpoint(f_back_low, f_x_high, # <<<<<<<<<<<<<< * f_links_low, f_links_high, e_links_low, e_links_high, * e_low, e_high, &e_x_low, &e_x_high, &f_x_low, &f_x_high, */ - __pyx_t_15 = PyInt_FromLong(__pyx_v_f_x_high); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1679; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyInt_FromLong(__pyx_v_f_x_high); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1681; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1683 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1685 * e_low, e_high, &e_x_low, &e_x_high, &f_x_low, &f_x_high, * f_sent_len, e_sent_len, * self.train_max_initial_size, self.train_max_initial_size, # <<<<<<<<<<<<<< @@ -54304,7 +54351,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj if (((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->find_fixpoint(__pyx_v_self, __pyx_v_f_back_low, __pyx_t_15, __pyx_v_f_links_low, __pyx_v_f_links_high, __pyx_v_e_links_low, __pyx_v_e_links_high, __pyx_v_e_low, __pyx_v_e_high, (&__pyx_v_e_x_low), (&__pyx_v_e_x_high), (&__pyx_v_f_x_low), (&__pyx_v_f_x_high), __pyx_v_f_sent_len, __pyx_v_e_sent_len, __pyx_v_self->train_max_initial_size, __pyx_v_self->train_max_initial_size, 1, 1, 1, 0, 1, 1, 0)) { __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1685 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1687 * self.train_max_initial_size, self.train_max_initial_size, * 1, 1, 1, 0, 1, 1, 0) and * ((not self.tight_phrases) or f_links_low[f_x_high-1] != -1) and # <<<<<<<<<<<<<< @@ -54320,17 +54367,17 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1686 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1688 * 1, 1, 1, 0, 1, 1, 0) and * ((not self.tight_phrases) or f_links_low[f_x_high-1] != -1) and * self.find_fixpoint(f_high, f_x_high, # <<<<<<<<<<<<<< * f_links_low, f_links_high, e_links_low, e_links_high, * -1, -1, e_gap_low+gap_start+num_gaps, e_gap_high+gap_start+num_gaps, */ - __pyx_t_14 = PyInt_FromLong(__pyx_v_f_x_high); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1686; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyInt_FromLong(__pyx_v_f_x_high); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1688; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1691 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1693 * f_gap_low+gap_start+num_gaps, f_gap_high+gap_start+num_gaps, * f_sent_len, e_sent_len, * self.train_max_initial_size, self.train_max_initial_size, # <<<<<<<<<<<<<< @@ -54353,7 +54400,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1693 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1695 * self.train_max_initial_size, self.train_max_initial_size, * 0, 0, 0, 0, 0, 0, 0)): * fphr_arr._clear() # <<<<<<<<<<<<<< @@ -54362,7 +54409,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_fphr_arr->__pyx_vtab)->_clear(__pyx_v_fphr_arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1694 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1696 * 0, 0, 0, 0, 0, 0, 0)): * fphr_arr._clear() * i = 1 # <<<<<<<<<<<<<< @@ -54371,21 +54418,21 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_i = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1695 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1697 * fphr_arr._clear() * i = 1 * self.findexes.reset() # <<<<<<<<<<<<<< * if f_back_low < f_low: * fphr_arr._append(sym_setindex(self.category, i)) */ - __pyx_t_15 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes), __pyx_n_s__reset); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1695; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes), __pyx_n_s__reset); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1697; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); - __pyx_t_14 = PyObject_Call(__pyx_t_15, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1695; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyObject_Call(__pyx_t_15, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1697; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; __Pyx_DECREF(__pyx_t_14); __pyx_t_14 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1696 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1698 * i = 1 * self.findexes.reset() * if f_back_low < f_low: # <<<<<<<<<<<<<< @@ -54395,7 +54442,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_9 = (__pyx_v_f_back_low < __pyx_v_f_low); if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1697 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1699 * self.findexes.reset() * if f_back_low < f_low: * fphr_arr._append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< @@ -54404,7 +54451,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_fphr_arr->__pyx_vtab)->_append(__pyx_v_fphr_arr, __pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1698 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1700 * if f_back_low < f_low: * fphr_arr._append(sym_setindex(self.category, i)) * i = i+1 # <<<<<<<<<<<<<< @@ -54413,16 +54460,16 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_i = (__pyx_v_i + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1699 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1701 * fphr_arr._append(sym_setindex(self.category, i)) * i = i+1 * self.findexes.append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< * self.findexes.extend(self.findexes1) * for j from 0 <= j < phrase.n: */ - __pyx_t_14 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1699; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1701; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); - __pyx_t_15 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes), __pyx_t_14); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1699; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes), __pyx_t_14); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1701; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_DECREF(__pyx_t_14); __pyx_t_14 = 0; __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; @@ -54430,27 +54477,27 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L85:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1700 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1702 * i = i+1 * self.findexes.append(sym_setindex(self.category, i)) * self.findexes.extend(self.findexes1) # <<<<<<<<<<<<<< * for j from 0 <= j < phrase.n: * if sym_isvar(phrase.syms[j]): */ - __pyx_t_15 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes), __pyx_n_s__extend); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1700; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes), __pyx_n_s__extend); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1702; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); - __pyx_t_14 = PyTuple_New(1); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1700; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyTuple_New(1); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1702; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); __Pyx_INCREF(((PyObject *)__pyx_v_self->findexes1)); PyTuple_SET_ITEM(__pyx_t_14, 0, ((PyObject *)__pyx_v_self->findexes1)); __Pyx_GIVEREF(((PyObject *)__pyx_v_self->findexes1)); - __pyx_t_1 = PyObject_Call(__pyx_t_15, ((PyObject *)__pyx_t_14), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1700; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_Call(__pyx_t_15, ((PyObject *)__pyx_t_14), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1702; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_14)); __pyx_t_14 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1701 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1703 * self.findexes.append(sym_setindex(self.category, i)) * self.findexes.extend(self.findexes1) * for j from 0 <= j < phrase.n: # <<<<<<<<<<<<<< @@ -54460,7 +54507,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_3 = __pyx_v_phrase->n; for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_3; __pyx_v_j++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1702 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1704 * self.findexes.extend(self.findexes1) * for j from 0 <= j < phrase.n: * if sym_isvar(phrase.syms[j]): # <<<<<<<<<<<<<< @@ -54470,7 +54517,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_4 = __pyx_f_3_sa_sym_isvar((__pyx_v_phrase->syms[__pyx_v_j])); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1703 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1705 * for j from 0 <= j < phrase.n: * if sym_isvar(phrase.syms[j]): * fphr_arr._append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< @@ -54479,7 +54526,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_fphr_arr->__pyx_vtab)->_append(__pyx_v_fphr_arr, __pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1704 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1706 * if sym_isvar(phrase.syms[j]): * fphr_arr._append(sym_setindex(self.category, i)) * i = i + 1 # <<<<<<<<<<<<<< @@ -54491,7 +54538,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1706 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1708 * i = i + 1 * else: * fphr_arr._append(phrase.syms[j]) # <<<<<<<<<<<<<< @@ -54503,7 +54550,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_L88:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1707 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1709 * else: * fphr_arr._append(phrase.syms[j]) * fphr_arr._append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< @@ -54512,81 +54559,81 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_fphr_arr->__pyx_vtab)->_append(__pyx_v_fphr_arr, __pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1708 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1710 * fphr_arr._append(phrase.syms[j]) * fphr_arr._append(sym_setindex(self.category, i)) * self.findexes.append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< * fphr = Phrase(fphr_arr) * phrase_list = self.extract_phrases(e_x_low, e_x_high, e_gap_low+gap_start, e_gap_high+gap_start, e_links_low, num_gaps+1, */ - __pyx_t_1 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1708; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1710; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_14 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes), __pyx_t_1); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1708; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes), __pyx_t_1); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1710; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_14); __pyx_t_14 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1709 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1711 * fphr_arr._append(sym_setindex(self.category, i)) * self.findexes.append(sym_setindex(self.category, i)) * fphr = Phrase(fphr_arr) # <<<<<<<<<<<<<< * phrase_list = self.extract_phrases(e_x_low, e_x_high, e_gap_low+gap_start, e_gap_high+gap_start, e_links_low, num_gaps+1, * f_x_low, f_x_high, f_gap_low+gap_start, f_gap_high+gap_start, f_links_low, */ - __pyx_t_14 = PyTuple_New(1); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1709; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyTuple_New(1); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1711; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); __Pyx_INCREF(((PyObject *)__pyx_v_fphr_arr)); PyTuple_SET_ITEM(__pyx_t_14, 0, ((PyObject *)__pyx_v_fphr_arr)); __Pyx_GIVEREF(((PyObject *)__pyx_v_fphr_arr)); - __pyx_t_1 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_Phrase)), ((PyObject *)__pyx_t_14), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1709; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_Phrase)), ((PyObject *)__pyx_t_14), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1711; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(((PyObject *)__pyx_t_14)); __pyx_t_14 = 0; __Pyx_DECREF(((PyObject *)__pyx_v_fphr)); __pyx_v_fphr = ((struct __pyx_obj_3_sa_Phrase *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1712 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1714 * phrase_list = self.extract_phrases(e_x_low, e_x_high, e_gap_low+gap_start, e_gap_high+gap_start, e_links_low, num_gaps+1, * f_x_low, f_x_high, f_gap_low+gap_start, f_gap_high+gap_start, f_links_low, * matching.sent_id, e_sent_len, e_sent_start) # <<<<<<<<<<<<<< * if len(phrase_list) > 0: * pair_count = 1.0 / len(phrase_list) */ - __pyx_t_1 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->extract_phrases(__pyx_v_self, __pyx_v_e_x_low, __pyx_v_e_x_high, (__pyx_v_e_gap_low + __pyx_v_gap_start), (__pyx_v_e_gap_high + __pyx_v_gap_start), __pyx_v_e_links_low, (__pyx_v_num_gaps + 1), __pyx_v_f_x_low, __pyx_v_f_x_high, (__pyx_v_f_gap_low + __pyx_v_gap_start), (__pyx_v_f_gap_high + __pyx_v_gap_start), __pyx_v_f_links_low, __pyx_v_matching->sent_id, __pyx_v_e_sent_len, __pyx_v_e_sent_start); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1710; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->extract_phrases(__pyx_v_self, __pyx_v_e_x_low, __pyx_v_e_x_high, (__pyx_v_e_gap_low + __pyx_v_gap_start), (__pyx_v_e_gap_high + __pyx_v_gap_start), __pyx_v_e_links_low, (__pyx_v_num_gaps + 1), __pyx_v_f_x_low, __pyx_v_f_x_high, (__pyx_v_f_gap_low + __pyx_v_gap_start), (__pyx_v_f_gap_high + __pyx_v_gap_start), __pyx_v_f_links_low, __pyx_v_matching->sent_id, __pyx_v_e_sent_len, __pyx_v_e_sent_start); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1712; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_XDECREF(__pyx_v_phrase_list); __pyx_v_phrase_list = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1713 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1715 * f_x_low, f_x_high, f_gap_low+gap_start, f_gap_high+gap_start, f_links_low, * matching.sent_id, e_sent_len, e_sent_start) * if len(phrase_list) > 0: # <<<<<<<<<<<<<< * pair_count = 1.0 / len(phrase_list) * else: */ - __pyx_t_13 = PyObject_Length(__pyx_v_phrase_list); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1713; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = PyObject_Length(__pyx_v_phrase_list); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1715; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_9 = (__pyx_t_13 > 0); if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1714 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1716 * matching.sent_id, e_sent_len, e_sent_start) * if len(phrase_list) > 0: * pair_count = 1.0 / len(phrase_list) # <<<<<<<<<<<<<< * else: * pair_count = 0 */ - __pyx_t_13 = PyObject_Length(__pyx_v_phrase_list); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1714; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = PyObject_Length(__pyx_v_phrase_list); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1716; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (unlikely(__pyx_t_13 == 0)) { PyErr_Format(PyExc_ZeroDivisionError, "float division"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1714; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1716; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_v_pair_count = (1.0 / __pyx_t_13); goto __pyx_L89; } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1716 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1718 * pair_count = 1.0 / len(phrase_list) * else: * pair_count = 0 # <<<<<<<<<<<<<< @@ -54597,7 +54644,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L89:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1717 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1719 * else: * pair_count = 0 * for phrase2, eindexes in phrase_list: # <<<<<<<<<<<<<< @@ -54608,7 +54655,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_1 = __pyx_v_phrase_list; __Pyx_INCREF(__pyx_t_1); __pyx_t_13 = 0; __pyx_t_16 = NULL; } else { - __pyx_t_13 = -1; __pyx_t_1 = PyObject_GetIter(__pyx_v_phrase_list); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1717; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = -1; __pyx_t_1 = PyObject_GetIter(__pyx_v_phrase_list); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_t_16 = Py_TYPE(__pyx_t_1)->tp_iternext; } @@ -54616,23 +54663,23 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj if (!__pyx_t_16 && PyList_CheckExact(__pyx_t_1)) { if (__pyx_t_13 >= PyList_GET_SIZE(__pyx_t_1)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_14 = PyList_GET_ITEM(__pyx_t_1, __pyx_t_13); __Pyx_INCREF(__pyx_t_14); __pyx_t_13++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1717; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyList_GET_ITEM(__pyx_t_1, __pyx_t_13); __Pyx_INCREF(__pyx_t_14); __pyx_t_13++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_14 = PySequence_ITEM(__pyx_t_1, __pyx_t_13); __pyx_t_13++; if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1717; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PySequence_ITEM(__pyx_t_1, __pyx_t_13); __pyx_t_13++; if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else if (!__pyx_t_16 && PyTuple_CheckExact(__pyx_t_1)) { if (__pyx_t_13 >= PyTuple_GET_SIZE(__pyx_t_1)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_14 = PyTuple_GET_ITEM(__pyx_t_1, __pyx_t_13); __Pyx_INCREF(__pyx_t_14); __pyx_t_13++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1717; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyTuple_GET_ITEM(__pyx_t_1, __pyx_t_13); __Pyx_INCREF(__pyx_t_14); __pyx_t_13++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_14 = PySequence_ITEM(__pyx_t_1, __pyx_t_13); __pyx_t_13++; if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1717; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PySequence_ITEM(__pyx_t_1, __pyx_t_13); __pyx_t_13++; if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else { __pyx_t_14 = __pyx_t_16(__pyx_t_1); if (unlikely(!__pyx_t_14)) { if (PyErr_Occurred()) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1717; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } break; } @@ -54648,7 +54695,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj if (unlikely(size != 2)) { if (size > 2) __Pyx_RaiseTooManyValuesError(2); else if (size >= 0) __Pyx_RaiseNeedMoreValuesError(size); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1717; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } #if CYTHON_COMPILING_IN_CPYTHON if (likely(PyTuple_CheckExact(sequence))) { @@ -54661,14 +54708,14 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_INCREF(__pyx_t_15); __Pyx_INCREF(__pyx_t_2); #else - __pyx_t_15 = PySequence_ITEM(sequence, 0); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1717; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_2 = PySequence_ITEM(sequence, 1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1717; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PySequence_ITEM(sequence, 0); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PySequence_ITEM(sequence, 1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif __Pyx_DECREF(__pyx_t_14); __pyx_t_14 = 0; } else { Py_ssize_t index = -1; - __pyx_t_10 = PyObject_GetIter(__pyx_t_14); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1717; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyObject_GetIter(__pyx_t_14); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); __Pyx_DECREF(__pyx_t_14); __pyx_t_14 = 0; __pyx_t_17 = Py_TYPE(__pyx_t_10)->tp_iternext; @@ -54676,7 +54723,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_GOTREF(__pyx_t_15); index = 1; __pyx_t_2 = __pyx_t_17(__pyx_t_10); if (unlikely(!__pyx_t_2)) goto __pyx_L92_unpacking_failed; __Pyx_GOTREF(__pyx_t_2); - if (__Pyx_IternextUnpackEndCheck(__pyx_t_17(__pyx_t_10), 2) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1717; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_IternextUnpackEndCheck(__pyx_t_17(__pyx_t_10), 2) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_17 = NULL; __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; goto __pyx_L93_unpacking_done; @@ -54684,7 +54731,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; __pyx_t_17 = NULL; if (__Pyx_IterFinish() == 0) __Pyx_RaiseNeedMoreValuesError(index); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1717; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_L93_unpacking_done:; } __Pyx_XDECREF(__pyx_v_phrase2); @@ -54694,7 +54741,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_v_eindexes = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1718 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1720 * pair_count = 0 * for phrase2, eindexes in phrase_list: * als3 = self.create_alignments(sent_links,num_links,self.findexes,eindexes) # <<<<<<<<<<<<<< @@ -54703,31 +54750,31 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_t_14 = ((PyObject *)__pyx_v_self->findexes); __Pyx_INCREF(__pyx_t_14); - __pyx_t_2 = ((PyObject *)((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->create_alignments(__pyx_v_self, __pyx_v_sent_links, __pyx_v_num_links, __pyx_t_14, __pyx_v_eindexes)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1718; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = ((PyObject *)((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->create_alignments(__pyx_v_self, __pyx_v_sent_links, __pyx_v_num_links, __pyx_t_14, __pyx_v_eindexes)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1720; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_14); __pyx_t_14 = 0; __Pyx_XDECREF(((PyObject *)__pyx_v_als3)); __pyx_v_als3 = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1719 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1721 * for phrase2, eindexes in phrase_list: * als3 = self.create_alignments(sent_links,num_links,self.findexes,eindexes) * extracts.append((fphr, phrase2, pair_count, tuple(als3))) # <<<<<<<<<<<<<< * if (num_gaps < self.max_nonterminals - 1 and * phrase_len+1 < self.max_length and */ - __pyx_t_2 = PyFloat_FromDouble(__pyx_v_pair_count); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyFloat_FromDouble(__pyx_v_pair_count); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1721; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_14 = PyTuple_New(1); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyTuple_New(1); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1721; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); __Pyx_INCREF(((PyObject *)__pyx_v_als3)); PyTuple_SET_ITEM(__pyx_t_14, 0, ((PyObject *)__pyx_v_als3)); __Pyx_GIVEREF(((PyObject *)__pyx_v_als3)); - __pyx_t_15 = PyObject_Call(((PyObject *)((PyObject*)(&PyTuple_Type))), ((PyObject *)__pyx_t_14), NULL); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyObject_Call(((PyObject *)((PyObject*)(&PyTuple_Type))), ((PyObject *)__pyx_t_14), NULL); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1721; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_DECREF(((PyObject *)__pyx_t_14)); __pyx_t_14 = 0; - __pyx_t_14 = PyTuple_New(4); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyTuple_New(4); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1721; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); __Pyx_INCREF(((PyObject *)__pyx_v_fphr)); PyTuple_SET_ITEM(__pyx_t_14, 0, ((PyObject *)__pyx_v_fphr)); @@ -54741,7 +54788,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_GIVEREF(__pyx_t_15); __pyx_t_2 = 0; __pyx_t_15 = 0; - __pyx_t_15 = __Pyx_PyObject_Append(__pyx_v_extracts, ((PyObject *)__pyx_t_14)); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = __Pyx_PyObject_Append(__pyx_v_extracts, ((PyObject *)__pyx_t_14)); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1721; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_DECREF(((PyObject *)__pyx_t_14)); __pyx_t_14 = 0; __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; @@ -54754,7 +54801,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L79:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1720 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1722 * als3 = self.create_alignments(sent_links,num_links,self.findexes,eindexes) * extracts.append((fphr, phrase2, pair_count, tuple(als3))) * if (num_gaps < self.max_nonterminals - 1 and # <<<<<<<<<<<<<< @@ -54764,7 +54811,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_9 = (__pyx_v_num_gaps < (__pyx_v_self->max_nonterminals - 1)); if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1721 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1723 * extracts.append((fphr, phrase2, pair_count, tuple(als3))) * if (num_gaps < self.max_nonterminals - 1 and * phrase_len+1 < self.max_length and # <<<<<<<<<<<<<< @@ -54774,7 +54821,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_7 = ((__pyx_v_phrase_len + 1) < __pyx_v_self->max_length); if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1722 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1724 * if (num_gaps < self.max_nonterminals - 1 and * phrase_len+1 < self.max_length and * f_back_high == f_high and # <<<<<<<<<<<<<< @@ -54784,7 +54831,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_18 = (__pyx_v_f_back_high == __pyx_v_f_high); if (__pyx_t_18) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1723 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1725 * phrase_len+1 < self.max_length and * f_back_high == f_high and * f_back_low == f_low and # <<<<<<<<<<<<<< @@ -54794,7 +54841,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_8 = (__pyx_v_f_back_low == __pyx_v_f_low); if (__pyx_t_8) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1724 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1726 * f_back_high == f_high and * f_back_low == f_low and * f_back_high - f_back_low + (2*self.train_min_gap_size) <= self.train_max_initial_size and # <<<<<<<<<<<<<< @@ -54804,7 +54851,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_19 = (((__pyx_v_f_back_high - __pyx_v_f_back_low) + (2 * __pyx_v_self->train_min_gap_size)) <= __pyx_v_self->train_max_initial_size); if (__pyx_t_19) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1725 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1727 * f_back_low == f_low and * f_back_high - f_back_low + (2*self.train_min_gap_size) <= self.train_max_initial_size and * f_low >= self.train_min_gap_size and # <<<<<<<<<<<<<< @@ -54814,7 +54861,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_20 = (__pyx_v_f_low >= __pyx_v_self->train_min_gap_size); if (__pyx_t_20) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1726 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1728 * f_back_high - f_back_low + (2*self.train_min_gap_size) <= self.train_max_initial_size and * f_low >= self.train_min_gap_size and * f_high <= f_sent_len - self.train_min_gap_size and # <<<<<<<<<<<<<< @@ -54824,7 +54871,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_21 = (__pyx_v_f_high <= (__pyx_v_f_sent_len - __pyx_v_self->train_min_gap_size)); if (__pyx_t_21) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1727 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1729 * f_low >= self.train_min_gap_size and * f_high <= f_sent_len - self.train_min_gap_size and * ((not self.tight_phrases) or (f_links_low[f_low-1] != -1 and f_links_low[f_high] != -1))): # <<<<<<<<<<<<<< @@ -54874,7 +54921,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1729 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1731 * ((not self.tight_phrases) or (f_links_low[f_low-1] != -1 and f_links_low[f_high] != -1))): * * met_constraints = 1 # <<<<<<<<<<<<<< @@ -54883,7 +54930,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_met_constraints = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1730 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1732 * * met_constraints = 1 * f_x_low = f_low-self.train_min_gap_size # <<<<<<<<<<<<<< @@ -54892,7 +54939,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_f_x_low = (__pyx_v_f_low - __pyx_v_self->train_min_gap_size); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1731 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1733 * met_constraints = 1 * f_x_low = f_low-self.train_min_gap_size * if self.tight_phrases: # <<<<<<<<<<<<<< @@ -54901,7 +54948,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ if (__pyx_v_self->tight_phrases) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1732 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1734 * f_x_low = f_low-self.train_min_gap_size * if self.tight_phrases: * while f_x_low >= 0 and f_links_low[f_x_low] == -1: # <<<<<<<<<<<<<< @@ -54918,7 +54965,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (!__pyx_t_18) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1733 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1735 * if self.tight_phrases: * while f_x_low >= 0 and f_links_low[f_x_low] == -1: * f_x_low = f_x_low - 1 # <<<<<<<<<<<<<< @@ -54931,7 +54978,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L95:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1734 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1736 * while f_x_low >= 0 and f_links_low[f_x_low] == -1: * f_x_low = f_x_low - 1 * if f_x_low < 0: # <<<<<<<<<<<<<< @@ -54941,7 +54988,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_18 = (__pyx_v_f_x_low < 0); if (__pyx_t_18) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1735 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1737 * f_x_low = f_x_low - 1 * if f_x_low < 0: * met_constraints = 0 # <<<<<<<<<<<<<< @@ -54953,7 +55000,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L98:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1737 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1739 * met_constraints = 0 * * f_x_high = f_high+self.train_min_gap_size # <<<<<<<<<<<<<< @@ -54962,7 +55009,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_f_x_high = (__pyx_v_f_high + __pyx_v_self->train_min_gap_size); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1738 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1740 * * f_x_high = f_high+self.train_min_gap_size * if self.tight_phrases: # <<<<<<<<<<<<<< @@ -54971,7 +55018,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ if (__pyx_v_self->tight_phrases) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1739 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1741 * f_x_high = f_high+self.train_min_gap_size * if self.tight_phrases: * while f_x_high <= f_sent_len and f_links_low[f_x_high-1] == -1: # <<<<<<<<<<<<<< @@ -54988,7 +55035,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (!__pyx_t_9) break; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1740 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1742 * if self.tight_phrases: * while f_x_high <= f_sent_len and f_links_low[f_x_high-1] == -1: * f_x_high = f_x_high + 1 # <<<<<<<<<<<<<< @@ -55001,7 +55048,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L99:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1741 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1743 * while f_x_high <= f_sent_len and f_links_low[f_x_high-1] == -1: * f_x_high = f_x_high + 1 * if f_x_high > f_sent_len or f_x_high - f_x_low > self.train_max_initial_size: # <<<<<<<<<<<<<< @@ -55017,7 +55064,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_7) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1742 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1744 * f_x_high = f_x_high + 1 * if f_x_high > f_sent_len or f_x_high - f_x_low > self.train_max_initial_size: * met_constraints = 0 # <<<<<<<<<<<<<< @@ -55029,7 +55076,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L102:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1744 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1746 * met_constraints = 0 * * if (met_constraints and # <<<<<<<<<<<<<< @@ -55038,17 +55085,17 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ if (__pyx_v_met_constraints) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1745 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1747 * * if (met_constraints and * self.find_fixpoint(f_x_low, f_x_high, # <<<<<<<<<<<<<< * f_links_low, f_links_high, e_links_low, e_links_high, * e_low, e_high, &e_x_low, &e_x_high, &f_x_low, &f_x_high, */ - __pyx_t_1 = PyInt_FromLong(__pyx_v_f_x_high); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1745; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyInt_FromLong(__pyx_v_f_x_high); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1747; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1749 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1751 * e_low, e_high, &e_x_low, &e_x_high, &f_x_low, &f_x_high, * f_sent_len, e_sent_len, * self.train_max_initial_size, self.train_max_initial_size, # <<<<<<<<<<<<<< @@ -55058,7 +55105,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj if (((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->find_fixpoint(__pyx_v_self, __pyx_v_f_x_low, __pyx_t_1, __pyx_v_f_links_low, __pyx_v_f_links_high, __pyx_v_e_links_low, __pyx_v_e_links_high, __pyx_v_e_low, __pyx_v_e_high, (&__pyx_v_e_x_low), (&__pyx_v_e_x_high), (&__pyx_v_f_x_low), (&__pyx_v_f_x_high), __pyx_v_f_sent_len, __pyx_v_e_sent_len, __pyx_v_self->train_max_initial_size, __pyx_v_self->train_max_initial_size, 1, 1, 2, 1, 1, 1, 1)) { __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1751 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1753 * self.train_max_initial_size, self.train_max_initial_size, * 1, 1, 2, 1, 1, 1, 1) and * ((not self.tight_phrases) or (f_links_low[f_x_low] != -1 and f_links_low[f_x_high-1] != -1)) and # <<<<<<<<<<<<<< @@ -55080,17 +55127,17 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_9) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1752 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1754 * 1, 1, 2, 1, 1, 1, 1) and * ((not self.tight_phrases) or (f_links_low[f_x_low] != -1 and f_links_low[f_x_high-1] != -1)) and * self.find_fixpoint(f_x_low, f_low, # <<<<<<<<<<<<<< * f_links_low, f_links_high, e_links_low, e_links_high, * -1, -1, e_gap_low, e_gap_high, f_gap_low, f_gap_high, */ - __pyx_t_15 = PyInt_FromLong(__pyx_v_f_low); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1752; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyInt_FromLong(__pyx_v_f_low); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1754; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1756 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1758 * -1, -1, e_gap_low, e_gap_high, f_gap_low, f_gap_high, * f_sent_len, e_sent_len, * self.train_max_initial_size, self.train_max_initial_size, # <<<<<<<<<<<<<< @@ -55101,17 +55148,17 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; if (__pyx_t_3) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1758 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1760 * self.train_max_initial_size, self.train_max_initial_size, * 0, 0, 0, 0, 0, 0, 0) and * self.find_fixpoint(f_high, f_x_high, # <<<<<<<<<<<<<< * f_links_low, f_links_high, e_links_low, e_links_high, * -1, -1, e_gap_low+1+num_gaps, e_gap_high+1+num_gaps, */ - __pyx_t_15 = PyInt_FromLong(__pyx_v_f_x_high); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1758; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyInt_FromLong(__pyx_v_f_x_high); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1760; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1763 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1765 * f_gap_low+1+num_gaps, f_gap_high+1+num_gaps, * f_sent_len, e_sent_len, * self.train_max_initial_size, self.train_max_initial_size, # <<<<<<<<<<<<<< @@ -55139,7 +55186,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } if (__pyx_t_8) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1765 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1767 * self.train_max_initial_size, self.train_max_initial_size, * 0, 0, 0, 0, 0, 0, 0)): * fphr_arr._clear() # <<<<<<<<<<<<<< @@ -55148,7 +55195,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_fphr_arr->__pyx_vtab)->_clear(__pyx_v_fphr_arr); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1766 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1768 * 0, 0, 0, 0, 0, 0, 0)): * fphr_arr._clear() * i = 1 # <<<<<<<<<<<<<< @@ -55157,35 +55204,35 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_i = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1767 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1769 * fphr_arr._clear() * i = 1 * self.findexes.reset() # <<<<<<<<<<<<<< * self.findexes.append(sym_setindex(self.category, i)) * fphr_arr._append(sym_setindex(self.category, i)) */ - __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes), __pyx_n_s__reset); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1767; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes), __pyx_n_s__reset); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1769; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_15 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1767; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_empty_tuple), NULL); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1769; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1768 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1770 * i = 1 * self.findexes.reset() * self.findexes.append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< * fphr_arr._append(sym_setindex(self.category, i)) * i = i+1 */ - __pyx_t_15 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1768; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1770; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); - __pyx_t_1 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes), __pyx_t_15); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1768; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes), __pyx_t_15); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1770; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1769 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1771 * self.findexes.reset() * self.findexes.append(sym_setindex(self.category, i)) * fphr_arr._append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< @@ -55194,7 +55241,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_fphr_arr->__pyx_vtab)->_append(__pyx_v_fphr_arr, __pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1770 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1772 * self.findexes.append(sym_setindex(self.category, i)) * fphr_arr._append(sym_setindex(self.category, i)) * i = i+1 # <<<<<<<<<<<<<< @@ -55203,27 +55250,27 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_v_i = (__pyx_v_i + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1771 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1773 * fphr_arr._append(sym_setindex(self.category, i)) * i = i+1 * self.findexes.extend(self.findexes1) # <<<<<<<<<<<<<< * for j from 0 <= j < phrase.n: * if sym_isvar(phrase.syms[j]): */ - __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes), __pyx_n_s__extend); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1771; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self->findexes), __pyx_n_s__extend); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1773; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_15 = PyTuple_New(1); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1771; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyTuple_New(1); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1773; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_INCREF(((PyObject *)__pyx_v_self->findexes1)); PyTuple_SET_ITEM(__pyx_t_15, 0, ((PyObject *)__pyx_v_self->findexes1)); __Pyx_GIVEREF(((PyObject *)__pyx_v_self->findexes1)); - __pyx_t_14 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_t_15), NULL); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1771; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_t_15), NULL); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1773; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_15)); __pyx_t_15 = 0; __Pyx_DECREF(__pyx_t_14); __pyx_t_14 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1772 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1774 * i = i+1 * self.findexes.extend(self.findexes1) * for j from 0 <= j < phrase.n: # <<<<<<<<<<<<<< @@ -55233,7 +55280,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_3 = __pyx_v_phrase->n; for (__pyx_v_j = 0; __pyx_v_j < __pyx_t_3; __pyx_v_j++) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1773 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1775 * self.findexes.extend(self.findexes1) * for j from 0 <= j < phrase.n: * if sym_isvar(phrase.syms[j]): # <<<<<<<<<<<<<< @@ -55243,7 +55290,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_4 = __pyx_f_3_sa_sym_isvar((__pyx_v_phrase->syms[__pyx_v_j])); if (__pyx_t_4) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1774 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1776 * for j from 0 <= j < phrase.n: * if sym_isvar(phrase.syms[j]): * fphr_arr._append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< @@ -55252,7 +55299,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_fphr_arr->__pyx_vtab)->_append(__pyx_v_fphr_arr, __pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1775 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1777 * if sym_isvar(phrase.syms[j]): * fphr_arr._append(sym_setindex(self.category, i)) * i = i + 1 # <<<<<<<<<<<<<< @@ -55264,7 +55311,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1777 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1779 * i = i + 1 * else: * fphr_arr._append(phrase.syms[j]) # <<<<<<<<<<<<<< @@ -55276,7 +55323,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_L106:; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1778 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1780 * else: * fphr_arr._append(phrase.syms[j]) * fphr_arr._append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< @@ -55285,81 +55332,81 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_fphr_arr->__pyx_vtab)->_append(__pyx_v_fphr_arr, __pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1779 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1781 * fphr_arr._append(phrase.syms[j]) * fphr_arr._append(sym_setindex(self.category, i)) * self.findexes.append(sym_setindex(self.category, i)) # <<<<<<<<<<<<<< * fphr = Phrase(fphr_arr) * phrase_list = self.extract_phrases(e_x_low, e_x_high, e_gap_low, e_gap_high, e_links_low, num_gaps+2, */ - __pyx_t_14 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1779; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyInt_FromLong(__pyx_f_3_sa_sym_setindex(__pyx_v_self->category, __pyx_v_i)); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1781; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); - __pyx_t_15 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes), __pyx_t_14); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1779; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = __Pyx_PyObject_Append(((PyObject *)__pyx_v_self->findexes), __pyx_t_14); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1781; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_DECREF(__pyx_t_14); __pyx_t_14 = 0; __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1780 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1782 * fphr_arr._append(sym_setindex(self.category, i)) * self.findexes.append(sym_setindex(self.category, i)) * fphr = Phrase(fphr_arr) # <<<<<<<<<<<<<< * phrase_list = self.extract_phrases(e_x_low, e_x_high, e_gap_low, e_gap_high, e_links_low, num_gaps+2, * f_x_low, f_x_high, f_gap_low, f_gap_high, f_links_low, */ - __pyx_t_15 = PyTuple_New(1); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1780; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyTuple_New(1); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1782; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_INCREF(((PyObject *)__pyx_v_fphr_arr)); PyTuple_SET_ITEM(__pyx_t_15, 0, ((PyObject *)__pyx_v_fphr_arr)); __Pyx_GIVEREF(((PyObject *)__pyx_v_fphr_arr)); - __pyx_t_14 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_Phrase)), ((PyObject *)__pyx_t_15), NULL); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1780; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = PyObject_Call(((PyObject *)((PyObject*)__pyx_ptype_3_sa_Phrase)), ((PyObject *)__pyx_t_15), NULL); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1782; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); __Pyx_DECREF(((PyObject *)__pyx_t_15)); __pyx_t_15 = 0; __Pyx_DECREF(((PyObject *)__pyx_v_fphr)); __pyx_v_fphr = ((struct __pyx_obj_3_sa_Phrase *)__pyx_t_14); __pyx_t_14 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1783 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1785 * phrase_list = self.extract_phrases(e_x_low, e_x_high, e_gap_low, e_gap_high, e_links_low, num_gaps+2, * f_x_low, f_x_high, f_gap_low, f_gap_high, f_links_low, * matching.sent_id, e_sent_len, e_sent_start) # <<<<<<<<<<<<<< * if len(phrase_list) > 0: * pair_count = 1.0 / len(phrase_list) */ - __pyx_t_14 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->extract_phrases(__pyx_v_self, __pyx_v_e_x_low, __pyx_v_e_x_high, __pyx_v_e_gap_low, __pyx_v_e_gap_high, __pyx_v_e_links_low, (__pyx_v_num_gaps + 2), __pyx_v_f_x_low, __pyx_v_f_x_high, __pyx_v_f_gap_low, __pyx_v_f_gap_high, __pyx_v_f_links_low, __pyx_v_matching->sent_id, __pyx_v_e_sent_len, __pyx_v_e_sent_start); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1781; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_14 = ((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->extract_phrases(__pyx_v_self, __pyx_v_e_x_low, __pyx_v_e_x_high, __pyx_v_e_gap_low, __pyx_v_e_gap_high, __pyx_v_e_links_low, (__pyx_v_num_gaps + 2), __pyx_v_f_x_low, __pyx_v_f_x_high, __pyx_v_f_gap_low, __pyx_v_f_gap_high, __pyx_v_f_links_low, __pyx_v_matching->sent_id, __pyx_v_e_sent_len, __pyx_v_e_sent_start); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1783; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); __Pyx_XDECREF(__pyx_v_phrase_list); __pyx_v_phrase_list = __pyx_t_14; __pyx_t_14 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1784 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1786 * f_x_low, f_x_high, f_gap_low, f_gap_high, f_links_low, * matching.sent_id, e_sent_len, e_sent_start) * if len(phrase_list) > 0: # <<<<<<<<<<<<<< * pair_count = 1.0 / len(phrase_list) * else: */ - __pyx_t_13 = PyObject_Length(__pyx_v_phrase_list); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1784; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = PyObject_Length(__pyx_v_phrase_list); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1786; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_8 = (__pyx_t_13 > 0); if (__pyx_t_8) { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1785 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1787 * matching.sent_id, e_sent_len, e_sent_start) * if len(phrase_list) > 0: * pair_count = 1.0 / len(phrase_list) # <<<<<<<<<<<<<< * else: * pair_count = 0 */ - __pyx_t_13 = PyObject_Length(__pyx_v_phrase_list); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1785; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = PyObject_Length(__pyx_v_phrase_list); if (unlikely(__pyx_t_13 == -1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1787; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (unlikely(__pyx_t_13 == 0)) { PyErr_Format(PyExc_ZeroDivisionError, "float division"); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1785; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1787; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } __pyx_v_pair_count = (1.0 / __pyx_t_13); goto __pyx_L107; } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1787 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1789 * pair_count = 1.0 / len(phrase_list) * else: * pair_count = 0 # <<<<<<<<<<<<<< @@ -55370,7 +55417,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L107:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1788 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1790 * else: * pair_count = 0 * for phrase2, eindexes in phrase_list: # <<<<<<<<<<<<<< @@ -55381,7 +55428,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_t_14 = __pyx_v_phrase_list; __Pyx_INCREF(__pyx_t_14); __pyx_t_13 = 0; __pyx_t_16 = NULL; } else { - __pyx_t_13 = -1; __pyx_t_14 = PyObject_GetIter(__pyx_v_phrase_list); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1788; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_13 = -1; __pyx_t_14 = PyObject_GetIter(__pyx_v_phrase_list); if (unlikely(!__pyx_t_14)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_14); __pyx_t_16 = Py_TYPE(__pyx_t_14)->tp_iternext; } @@ -55389,23 +55436,23 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj if (!__pyx_t_16 && PyList_CheckExact(__pyx_t_14)) { if (__pyx_t_13 >= PyList_GET_SIZE(__pyx_t_14)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_15 = PyList_GET_ITEM(__pyx_t_14, __pyx_t_13); __Pyx_INCREF(__pyx_t_15); __pyx_t_13++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1788; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyList_GET_ITEM(__pyx_t_14, __pyx_t_13); __Pyx_INCREF(__pyx_t_15); __pyx_t_13++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_15 = PySequence_ITEM(__pyx_t_14, __pyx_t_13); __pyx_t_13++; if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1788; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PySequence_ITEM(__pyx_t_14, __pyx_t_13); __pyx_t_13++; if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else if (!__pyx_t_16 && PyTuple_CheckExact(__pyx_t_14)) { if (__pyx_t_13 >= PyTuple_GET_SIZE(__pyx_t_14)) break; #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_15 = PyTuple_GET_ITEM(__pyx_t_14, __pyx_t_13); __Pyx_INCREF(__pyx_t_15); __pyx_t_13++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1788; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyTuple_GET_ITEM(__pyx_t_14, __pyx_t_13); __Pyx_INCREF(__pyx_t_15); __pyx_t_13++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #else - __pyx_t_15 = PySequence_ITEM(__pyx_t_14, __pyx_t_13); __pyx_t_13++; if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1788; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PySequence_ITEM(__pyx_t_14, __pyx_t_13); __pyx_t_13++; if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif } else { __pyx_t_15 = __pyx_t_16(__pyx_t_14); if (unlikely(!__pyx_t_15)) { if (PyErr_Occurred()) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1788; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } break; } @@ -55421,7 +55468,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj if (unlikely(size != 2)) { if (size > 2) __Pyx_RaiseTooManyValuesError(2); else if (size >= 0) __Pyx_RaiseNeedMoreValuesError(size); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1788; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } #if CYTHON_COMPILING_IN_CPYTHON if (likely(PyTuple_CheckExact(sequence))) { @@ -55434,14 +55481,14 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_INCREF(__pyx_t_1); __Pyx_INCREF(__pyx_t_2); #else - __pyx_t_1 = PySequence_ITEM(sequence, 0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1788; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_2 = PySequence_ITEM(sequence, 1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1788; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PySequence_ITEM(sequence, 0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PySequence_ITEM(sequence, 1); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} #endif __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; } else { Py_ssize_t index = -1; - __pyx_t_10 = PyObject_GetIter(__pyx_t_15); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1788; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = PyObject_GetIter(__pyx_t_15); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_10); __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; __pyx_t_17 = Py_TYPE(__pyx_t_10)->tp_iternext; @@ -55449,7 +55496,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_GOTREF(__pyx_t_1); index = 1; __pyx_t_2 = __pyx_t_17(__pyx_t_10); if (unlikely(!__pyx_t_2)) goto __pyx_L110_unpacking_failed; __Pyx_GOTREF(__pyx_t_2); - if (__Pyx_IternextUnpackEndCheck(__pyx_t_17(__pyx_t_10), 2) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1788; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_IternextUnpackEndCheck(__pyx_t_17(__pyx_t_10), 2) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_17 = NULL; __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; goto __pyx_L111_unpacking_done; @@ -55457,7 +55504,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; __pyx_t_17 = NULL; if (__Pyx_IterFinish() == 0) __Pyx_RaiseNeedMoreValuesError(index); - {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1788; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_L111_unpacking_done:; } __Pyx_XDECREF(__pyx_v_phrase2); @@ -55467,7 +55514,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __pyx_v_eindexes = __pyx_t_2; __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1789 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1791 * pair_count = 0 * for phrase2, eindexes in phrase_list: * als4 = self.create_alignments(sent_links,num_links,self.findexes,eindexes) # <<<<<<<<<<<<<< @@ -55476,31 +55523,31 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ __pyx_t_15 = ((PyObject *)__pyx_v_self->findexes); __Pyx_INCREF(__pyx_t_15); - __pyx_t_2 = ((PyObject *)((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->create_alignments(__pyx_v_self, __pyx_v_sent_links, __pyx_v_num_links, __pyx_t_15, __pyx_v_eindexes)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1789; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = ((PyObject *)((struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory *)__pyx_v_self->__pyx_vtab)->create_alignments(__pyx_v_self, __pyx_v_sent_links, __pyx_v_num_links, __pyx_t_15, __pyx_v_eindexes)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1791; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_15); __pyx_t_15 = 0; __Pyx_XDECREF(((PyObject *)__pyx_v_als4)); __pyx_v_als4 = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1790 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1792 * for phrase2, eindexes in phrase_list: * als4 = self.create_alignments(sent_links,num_links,self.findexes,eindexes) * extracts.append((fphr, phrase2, pair_count, tuple(als4))) # <<<<<<<<<<<<<< * else: * reason_for_failure = "Unable to extract basic phrase" */ - __pyx_t_2 = PyFloat_FromDouble(__pyx_v_pair_count); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyFloat_FromDouble(__pyx_v_pair_count); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1792; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_15 = PyTuple_New(1); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyTuple_New(1); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1792; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_INCREF(((PyObject *)__pyx_v_als4)); PyTuple_SET_ITEM(__pyx_t_15, 0, ((PyObject *)__pyx_v_als4)); __Pyx_GIVEREF(((PyObject *)__pyx_v_als4)); - __pyx_t_1 = PyObject_Call(((PyObject *)((PyObject*)(&PyTuple_Type))), ((PyObject *)__pyx_t_15), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_Call(((PyObject *)((PyObject*)(&PyTuple_Type))), ((PyObject *)__pyx_t_15), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1792; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(((PyObject *)__pyx_t_15)); __pyx_t_15 = 0; - __pyx_t_15 = PyTuple_New(4); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_15 = PyTuple_New(4); if (unlikely(!__pyx_t_15)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1792; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_15); __Pyx_INCREF(((PyObject *)__pyx_v_fphr)); PyTuple_SET_ITEM(__pyx_t_15, 0, ((PyObject *)__pyx_v_fphr)); @@ -55514,7 +55561,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj __Pyx_GIVEREF(__pyx_t_1); __pyx_t_2 = 0; __pyx_t_1 = 0; - __pyx_t_1 = __Pyx_PyObject_Append(__pyx_v_extracts, ((PyObject *)__pyx_t_15)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_Append(__pyx_v_extracts, ((PyObject *)__pyx_t_15)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1792; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(((PyObject *)__pyx_t_15)); __pyx_t_15 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; @@ -55536,7 +55583,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } /*else*/ { - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1792 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1794 * extracts.append((fphr, phrase2, pair_count, tuple(als4))) * else: * reason_for_failure = "Unable to extract basic phrase" # <<<<<<<<<<<<<< @@ -55552,7 +55599,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj } __pyx_L33:; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1794 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1796 * reason_for_failure = "Unable to extract basic phrase" * * free(sent_links) # <<<<<<<<<<<<<< @@ -55561,7 +55608,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ free(__pyx_v_sent_links); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1795 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1797 * * free(sent_links) * free(f_links_low) # <<<<<<<<<<<<<< @@ -55570,7 +55617,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ free(__pyx_v_f_links_low); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1796 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1798 * free(sent_links) * free(f_links_low) * free(f_links_high) # <<<<<<<<<<<<<< @@ -55579,7 +55626,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ free(__pyx_v_f_links_high); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1797 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1799 * free(f_links_low) * free(f_links_high) * free(e_links_low) # <<<<<<<<<<<<<< @@ -55588,7 +55635,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ free(__pyx_v_e_links_low); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1798 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1800 * free(f_links_high) * free(e_links_low) * free(e_links_high) # <<<<<<<<<<<<<< @@ -55597,7 +55644,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ free(__pyx_v_e_links_high); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1799 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1801 * free(e_links_low) * free(e_links_high) * free(f_gap_low) # <<<<<<<<<<<<<< @@ -55606,7 +55653,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ free(__pyx_v_f_gap_low); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1800 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1802 * free(e_links_high) * free(f_gap_low) * free(f_gap_high) # <<<<<<<<<<<<<< @@ -55615,7 +55662,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ free(__pyx_v_f_gap_high); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1801 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1803 * free(f_gap_low) * free(f_gap_high) * free(e_gap_low) # <<<<<<<<<<<<<< @@ -55624,7 +55671,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ free(__pyx_v_e_gap_low); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1802 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1804 * free(f_gap_high) * free(e_gap_low) * free(e_gap_high) # <<<<<<<<<<<<<< @@ -55633,7 +55680,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj */ free(__pyx_v_e_gap_high); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1804 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1806 * free(e_gap_high) * * return extracts # <<<<<<<<<<<<<< @@ -55687,7 +55734,7 @@ static int __pyx_pw_3_sa_13FeatureVector_1__cinit__(PyObject *__pyx_v_self, PyOb return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":7 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":7 * * cdef class FeatureVector: * def __cinit__(self): # <<<<<<<<<<<<<< @@ -55706,7 +55753,7 @@ static int __pyx_pf_3_sa_13FeatureVector___cinit__(struct __pyx_obj_3_sa_Feature int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__cinit__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":8 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":8 * cdef class FeatureVector: * def __cinit__(self): * self.names = IntList(INITIAL_CAPACITY, INCREMENT) # <<<<<<<<<<<<<< @@ -55734,7 +55781,7 @@ static int __pyx_pf_3_sa_13FeatureVector___cinit__(struct __pyx_obj_3_sa_Feature __pyx_v_self->names = ((struct __pyx_obj_3_sa_IntList *)__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":9 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":9 * def __cinit__(self): * self.names = IntList(INITIAL_CAPACITY, INCREMENT) * self.values = FloatList(INITIAL_CAPACITY, INCREMENT) # <<<<<<<<<<<<<< @@ -55831,7 +55878,7 @@ static PyObject *__pyx_pw_3_sa_13FeatureVector_3set(PyObject *__pyx_v_self, PyOb return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":11 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":11 * self.values = FloatList(INITIAL_CAPACITY, INCREMENT) * * def set(self, unsigned name, float value): # <<<<<<<<<<<<<< @@ -55849,7 +55896,7 @@ static PyObject *__pyx_pf_3_sa_13FeatureVector_2set(struct __pyx_obj_3_sa_Featur int __pyx_clineno = 0; __Pyx_RefNannySetupContext("set", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":12 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":12 * * def set(self, unsigned name, float value): * self.names.append(name) # <<<<<<<<<<<<<< @@ -55863,7 +55910,7 @@ static PyObject *__pyx_pf_3_sa_13FeatureVector_2set(struct __pyx_obj_3_sa_Featur __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":13 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":13 * def set(self, unsigned name, float value): * self.names.append(name) * self.values.append(value) # <<<<<<<<<<<<<< @@ -55902,7 +55949,7 @@ static PyObject *__pyx_pw_3_sa_13FeatureVector_5__iter__(PyObject *__pyx_v_self) return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":15 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":15 * self.values.append(value) * * def __iter__(self): # <<<<<<<<<<<<<< @@ -55968,7 +56015,7 @@ static PyObject *__pyx_gb_3_sa_13FeatureVector_6generator5(__pyx_GeneratorObject __pyx_L3_first_run:; if (unlikely(!__pyx_sent_value)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 15; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":17 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":17 * def __iter__(self): * cdef unsigned i * for i in range(self.names.len): # <<<<<<<<<<<<<< @@ -55979,7 +56026,7 @@ static PyObject *__pyx_gb_3_sa_13FeatureVector_6generator5(__pyx_GeneratorObject for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_1; __pyx_t_2+=1) { __pyx_cur_scope->__pyx_v_i = __pyx_t_2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":18 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":18 * cdef unsigned i * for i in range(self.names.len): * yield (FD.word(self.names[i]), self.values[i]) # <<<<<<<<<<<<<< @@ -56043,7 +56090,7 @@ static PyObject *__pyx_pw_3_sa_13FeatureVector_8__str__(PyObject *__pyx_v_self) } static PyObject *__pyx_gb_3_sa_13FeatureVector_7__str___2generator12(__pyx_GeneratorObject *__pyx_generator, PyObject *__pyx_sent_value); /* proto */ -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":21 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":21 * * def __str__(self): * return ' '.join('%s=%s' % feat for feat in self) # <<<<<<<<<<<<<< @@ -56182,7 +56229,7 @@ static PyObject *__pyx_gb_3_sa_13FeatureVector_7__str___2generator12(__pyx_Gener return NULL; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":20 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":20 * yield (FD.word(self.names[i]), self.values[i]) * * def __str__(self): # <<<<<<<<<<<<<< @@ -56211,7 +56258,7 @@ static PyObject *__pyx_pf_3_sa_13FeatureVector_7__str__(struct __pyx_obj_3_sa_Fe __Pyx_INCREF((PyObject *)__pyx_cur_scope->__pyx_v_self); __Pyx_GIVEREF((PyObject *)__pyx_cur_scope->__pyx_v_self); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":21 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":21 * * def __str__(self): * return ' '.join('%s=%s' % feat for feat in self) # <<<<<<<<<<<<<< @@ -56267,7 +56314,7 @@ static int __pyx_pw_3_sa_6Scorer_1__init__(PyObject *__pyx_v_self, PyObject *__p return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":25 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":25 * cdef class Scorer: * cdef models * def __init__(self, *models): # <<<<<<<<<<<<<< @@ -56290,7 +56337,7 @@ static int __pyx_pf_3_sa_6Scorer___init__(struct __pyx_obj_3_sa_Scorer *__pyx_v_ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("__init__", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":26 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":26 * cdef models * def __init__(self, *models): * names = [FD.index(<char *>model.__name__) for model in models] # <<<<<<<<<<<<<< @@ -56324,7 +56371,7 @@ static int __pyx_pf_3_sa_6Scorer___init__(struct __pyx_obj_3_sa_Scorer *__pyx_v_ __pyx_v_names = __pyx_t_1; __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":27 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":27 * def __init__(self, *models): * names = [FD.index(<char *>model.__name__) for model in models] * self.models = zip(names, models) # <<<<<<<<<<<<<< @@ -56363,7 +56410,7 @@ static int __pyx_pf_3_sa_6Scorer___init__(struct __pyx_obj_3_sa_Scorer *__pyx_v_ return __pyx_r; } -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":29 +/* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":29 * self.models = zip(names, models) * * cdef FeatureVector score(self, ctx): # <<<<<<<<<<<<<< @@ -56390,7 +56437,7 @@ static struct __pyx_obj_3_sa_FeatureVector *__pyx_f_3_sa_6Scorer_score(struct __ int __pyx_clineno = 0; __Pyx_RefNannySetupContext("score", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":30 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":30 * * cdef FeatureVector score(self, ctx): * cdef FeatureVector scores = FeatureVector() # <<<<<<<<<<<<<< @@ -56402,7 +56449,7 @@ static struct __pyx_obj_3_sa_FeatureVector *__pyx_f_3_sa_6Scorer_score(struct __ __pyx_v_scores = ((struct __pyx_obj_3_sa_FeatureVector *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":31 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":31 * cdef FeatureVector score(self, ctx): * cdef FeatureVector scores = FeatureVector() * for name, model in self.models: # <<<<<<<<<<<<<< @@ -56499,7 +56546,7 @@ static struct __pyx_obj_3_sa_FeatureVector *__pyx_f_3_sa_6Scorer_score(struct __ __pyx_v_model = __pyx_t_6; __pyx_t_6 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":32 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":32 * cdef FeatureVector scores = FeatureVector() * for name, model in self.models: * scores.set(name, model(ctx)) # <<<<<<<<<<<<<< @@ -56531,7 +56578,7 @@ static struct __pyx_obj_3_sa_FeatureVector *__pyx_f_3_sa_6Scorer_score(struct __ } __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":33 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":33 * for name, model in self.models: * scores.set(name, model(ctx)) * return scores # <<<<<<<<<<<<<< @@ -65093,6 +65140,7 @@ static PyObject *__pyx_tp_new_3_sa___pyx_scope_struct_15_input(PyTypeObject *t, p->__pyx_v_frontier_nodes = 0; p->__pyx_v_fwords = 0; p->__pyx_v_hiero_phrase = 0; + p->__pyx_v_input_match = 0; p->__pyx_v_is_shadow_path = 0; p->__pyx_v_key = 0; p->__pyx_v_loc = 0; @@ -65147,6 +65195,7 @@ static void __pyx_tp_dealloc_3_sa___pyx_scope_struct_15_input(PyObject *o) { Py_CLEAR(p->__pyx_v_frontier_nodes); Py_CLEAR(p->__pyx_v_fwords); Py_CLEAR(p->__pyx_v_hiero_phrase); + Py_CLEAR(p->__pyx_v_input_match); Py_CLEAR(p->__pyx_v_is_shadow_path); Py_CLEAR(p->__pyx_v_key); Py_CLEAR(p->__pyx_v_loc); @@ -65238,6 +65287,9 @@ static int __pyx_tp_traverse_3_sa___pyx_scope_struct_15_input(PyObject *o, visit if (p->__pyx_v_hiero_phrase) { e = (*v)(((PyObject*)p->__pyx_v_hiero_phrase), a); if (e) return e; } + if (p->__pyx_v_input_match) { + e = (*v)(p->__pyx_v_input_match, a); if (e) return e; + } if (p->__pyx_v_is_shadow_path) { e = (*v)(p->__pyx_v_is_shadow_path, a); if (e) return e; } @@ -65391,6 +65443,9 @@ static int __pyx_tp_clear_3_sa___pyx_scope_struct_15_input(PyObject *o) { tmp = ((PyObject*)p->__pyx_v_hiero_phrase); p->__pyx_v_hiero_phrase = ((struct __pyx_obj_3_sa_Phrase *)Py_None); Py_INCREF(Py_None); Py_XDECREF(tmp); + tmp = ((PyObject*)p->__pyx_v_input_match); + p->__pyx_v_input_match = Py_None; Py_INCREF(Py_None); + Py_XDECREF(tmp); tmp = ((PyObject*)p->__pyx_v_is_shadow_path); p->__pyx_v_is_shadow_path = Py_None; Py_INCREF(Py_None); Py_XDECREF(tmp); @@ -66429,6 +66484,7 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s__index, __pyx_k__index, sizeof(__pyx_k__index), 0, 0, 1, 1}, {&__pyx_n_s__info, __pyx_k__info, sizeof(__pyx_k__info), 0, 0, 1, 1}, {&__pyx_n_s__initial_len, __pyx_k__initial_len, sizeof(__pyx_k__initial_len), 0, 0, 1, 1}, + {&__pyx_n_s__input_match, __pyx_k__input_match, sizeof(__pyx_k__input_match), 0, 0, 1, 1}, {&__pyx_n_s__input_span, __pyx_k__input_span, sizeof(__pyx_k__input_span), 0, 0, 1, 1}, {&__pyx_n_s__insert, __pyx_k__insert, sizeof(__pyx_k__insert), 0, 0, 1, 1}, {&__pyx_n_s__isa, __pyx_k__isa, sizeof(__pyx_k__isa), 0, 0, 1, 1}, @@ -66545,8 +66601,8 @@ static int __Pyx_InitCachedBuiltins(void) { __pyx_builtin_zip = __Pyx_GetName(__pyx_b, __pyx_n_s__zip); if (!__pyx_builtin_zip) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 363; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_builtin_StopIteration = __Pyx_GetName(__pyx_b, __pyx_n_s__StopIteration); if (!__pyx_builtin_StopIteration) {__pyx_filename = __pyx_f[6]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_builtin_cmp = __Pyx_GetName(__pyx_b, __pyx_n_s__cmp); if (!__pyx_builtin_cmp) {__pyx_filename = __pyx_f[7]; __pyx_lineno = 173; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_builtin_sorted = __Pyx_GetName(__pyx_b, __pyx_n_s__sorted); if (!__pyx_builtin_sorted) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 936; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_builtin_max = __Pyx_GetName(__pyx_b, __pyx_n_s__max); if (!__pyx_builtin_max) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1104; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_builtin_sorted = __Pyx_GetName(__pyx_b, __pyx_n_s__sorted); if (!__pyx_builtin_sorted) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 937; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_builtin_max = __Pyx_GetName(__pyx_b, __pyx_n_s__max); if (!__pyx_builtin_max) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1105; __pyx_clineno = __LINE__; goto __pyx_L1_error;} return 0; __pyx_L1_error:; return -1; @@ -66556,7 +66612,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("__Pyx_InitCachedConstants", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":20 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":20 * self.word2id = {"END_OF_FILE":0, "END_OF_LINE":1} * self.id2word = ["END_OF_FILE", "END_OF_LINE"] * self.data = IntList(1000,1000) # <<<<<<<<<<<<<< @@ -66573,7 +66629,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(__pyx_int_1000); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_10)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":21 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":21 * self.id2word = ["END_OF_FILE", "END_OF_LINE"] * self.data = IntList(1000,1000) * self.sent_id = IntList(1000,1000) # <<<<<<<<<<<<<< @@ -66590,7 +66646,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(__pyx_int_1000); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_11)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":22 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":22 * self.data = IntList(1000,1000) * self.sent_id = IntList(1000,1000) * self.sent_index = IntList(1000,1000) # <<<<<<<<<<<<<< @@ -66607,7 +66663,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(__pyx_int_1000); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_12)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":66 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":66 * f.write("%s " % self.get_word(w_id)) * if w_id == 1: * f.write("\n") # <<<<<<<<<<<<<< @@ -66621,7 +66677,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_14)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_15)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":61 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":61 * * def write_text(self, char* filename): * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -66641,7 +66697,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(Py_None); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_16)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":69 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":69 * * def read_text(self, char* filename): * with gzip_or_text(filename) as fp: # <<<<<<<<<<<<<< @@ -66661,7 +66717,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(Py_None); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_17)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":74 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":74 * def read_bitext(self, char* filename, int side): * with gzip_or_text(filename) as fp: * data = (line.split(' ||| ')[side] for line in fp) # <<<<<<<<<<<<<< @@ -66675,7 +66731,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_18)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_19)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":73 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":73 * * def read_bitext(self, char* filename, int side): * with gzip_or_text(filename) as fp: # <<<<<<<<<<<<<< @@ -66695,7 +66751,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(Py_None); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_20)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":144 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":144 * for i in self.data: * f.write("%d " %i) * f.write("\n") # <<<<<<<<<<<<<< @@ -66709,7 +66765,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_14)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_22)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":147 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":147 * for i in self.sent_index: * f.write("%d " %i) * f.write("\n") # <<<<<<<<<<<<<< @@ -66723,7 +66779,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_14)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_23)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":150 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":150 * for i in self.sent_id: * f.write("%d " %i) * f.write("\n") # <<<<<<<<<<<<<< @@ -66737,7 +66793,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_14)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_24)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":153 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":153 * for word in self.id2word: * f.write("%s %d " % (word, self.word2id[word])) * f.write("\n") # <<<<<<<<<<<<<< @@ -66751,7 +66807,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_14)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_26)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":156 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/data_array.pxi":156 * * def write_enhanced(self, char* filename): * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -66770,7 +66826,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(Py_None); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_28)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":46 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":46 * * def __cinit__(self, from_binary=None, from_text=None): * self.links = IntList(1000,1000) # <<<<<<<<<<<<<< @@ -66787,7 +66843,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(__pyx_int_1000); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_29)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":47 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":47 * def __cinit__(self, from_binary=None, from_text=None): * self.links = IntList(1000,1000) * self.sent_index = IntList(1000,1000) # <<<<<<<<<<<<<< @@ -66804,7 +66860,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(__pyx_int_1000); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_30)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":59 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":59 * pairs = line.split() * for pair in pairs: * (i, j) = map(int, pair.split('-')) # <<<<<<<<<<<<<< @@ -66818,7 +66874,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_31)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_32)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":54 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":54 * * def read_text(self, char* filename): * with gzip_or_text(filename) as f: # <<<<<<<<<<<<<< @@ -66838,7 +66894,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(Py_None); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_33)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":75 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":75 * for i, link in enumerate(self.links): * while i >= self.sent_index[sent_num]: * f.write("\n") # <<<<<<<<<<<<<< @@ -66852,7 +66908,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_14)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_34)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":78 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":78 * sent_num = sent_num + 1 * f.write("%d-%d " % self.unlink(link)) * f.write("\n") # <<<<<<<<<<<<<< @@ -66866,7 +66922,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_14)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_36)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":71 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":71 * * def write_text(self, char* filename): * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -66886,7 +66942,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(Py_None); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_37)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":92 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":92 * for link in self.links: * f.write("%d " % link) * f.write("\n") # <<<<<<<<<<<<<< @@ -66900,7 +66956,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_14)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_38)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":95 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":95 * for i in self.sent_index: * f.write("%d " % i) * f.write("\n") # <<<<<<<<<<<<<< @@ -66914,7 +66970,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_14)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_39)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/alignment.pxi":88 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/alignment.pxi":88 * * def write_enhanced(self, char* filename): * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -66934,7 +66990,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(Py_None); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_40)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":297 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":297 * * # Re-read file, placing words into buckets * f.seek(0) # <<<<<<<<<<<<<< @@ -66948,7 +67004,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(__pyx_int_0); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_43)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":273 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":273 * * fcount = IntList() * with gzip_or_text(filename) as f: # <<<<<<<<<<<<<< @@ -66968,7 +67024,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(Py_None); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_44)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":339 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":339 * * if i > j: * raise Exception("Sort error in CLex") # <<<<<<<<<<<<<< @@ -66982,7 +67038,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_46)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_47)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":362 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":362 * for i in self.f_index: * f.write("%d " % i) * f.write("\n") # <<<<<<<<<<<<<< @@ -66996,7 +67052,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_14)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_49)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":365 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":365 * for i, s1, s2 in zip(self.e_index, self.col1, self.col2): * f.write("%d %f %f " % (i, s1, s2)) * f.write("\n") # <<<<<<<<<<<<<< @@ -67010,7 +67066,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_14)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_51)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":368 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":368 * for i, w in enumerate(self.id2fword): * f.write("%d %s " % (i, w)) * f.write("\n") # <<<<<<<<<<<<<< @@ -67024,7 +67080,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_14)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_53)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":371 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":371 * for i, w in enumerate(self.id2eword): * f.write("%d %s " % (i, w)) * f.write("\n") # <<<<<<<<<<<<<< @@ -67038,7 +67094,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_14)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_54)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":359 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":359 * * def write_enhanced(self, char* filename): * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -67058,7 +67114,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(Py_None); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_55)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":404 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":404 * cdef i, N, e_id, f_id * * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -67078,7 +67134,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(Py_None); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_57)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":13 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":13 * cdef IntList rank * * logger.info("Constructing LCP array") # <<<<<<<<<<<<<< @@ -67092,7 +67148,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_60)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_61)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":34 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/lcp.pxi":34 * if h > 0: * h = h-1 * logger.info("LCP array completed") # <<<<<<<<<<<<<< @@ -67106,7 +67162,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_62)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_63)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":297 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":297 * pattern_rank = {} * * logger.info("Precomputing frequent intersections") # <<<<<<<<<<<<<< @@ -67120,7 +67176,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_72)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_73)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":314 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":314 * queue = IntList(increment=1000) * * logger.info(" Computing inverted indexes...") # <<<<<<<<<<<<<< @@ -67134,7 +67190,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_74)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_75)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":329 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":329 * trie_node_data_append(node, i) * * logger.info(" Computing collocations...") # <<<<<<<<<<<<<< @@ -67148,7 +67204,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_76)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_77)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":393 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":393 * for pattern2 in J_set: * if len(pattern1) + len(pattern2) + 1 < self.max_length: * combined_pattern = pattern1 + (-1,) + pattern2 # <<<<<<<<<<<<<< @@ -67162,7 +67218,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(__pyx_int_neg_1); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_79)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":400 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":400 * x = x+1 * if len(pattern1) + len(pattern2) + 1 <= self.max_length: * combined_pattern = pattern1 + (-1,) + pattern2 # <<<<<<<<<<<<<< @@ -67176,7 +67232,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(__pyx_int_neg_1); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_80)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":407 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":407 * x = x+2 * if len(pattern1) + len(pattern2) + 1<= self.max_length: * combined_pattern = pattern1 + (-1,) + pattern2 # <<<<<<<<<<<<<< @@ -67190,7 +67246,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(__pyx_int_neg_1); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_81)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":409 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/precomputation.pxi":409 * combined_pattern = pattern1 + (-1,) + pattern2 * IJ_set.add(combined_pattern) * combined_pattern = pattern2 + (-1,) + pattern1 # <<<<<<<<<<<<<< @@ -67204,7 +67260,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(__pyx_int_neg_1); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_82)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":94 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":94 * * '''Step 3: read off suffix array from inverse suffix array''' * logger.info(" Finalizing sort...") # <<<<<<<<<<<<<< @@ -67218,7 +67274,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_92)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_93)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":193 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":193 * for a_i in self.sa: * f.write("%d " % a_i) * f.write("\n") # <<<<<<<<<<<<<< @@ -67232,7 +67288,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_14)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_96)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":196 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":196 * for w_i in self.ha: * f.write("%d " % w_i) * f.write("\n") # <<<<<<<<<<<<<< @@ -67246,7 +67302,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_14)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_97)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":189 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/suffix_array.pxi":189 * * def write_enhanced(self, char* filename): * with open(filename, "w") as f: # <<<<<<<<<<<<<< @@ -67266,42 +67322,42 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(Py_None); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_98)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":108 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":109 * logger.info("Sampling strategy: uniform, max sample size = %d", sample_size) * else: * logger.info("Sampling strategy: no sampling") # <<<<<<<<<<<<<< * * def sample(self, PhraseLocation phrase_location): */ - __pyx_k_tuple_102 = PyTuple_New(1); if (unlikely(!__pyx_k_tuple_102)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_k_tuple_102 = PyTuple_New(1); if (unlikely(!__pyx_k_tuple_102)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 109; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_k_tuple_102); __Pyx_INCREF(((PyObject *)__pyx_kp_s_101)); PyTuple_SET_ITEM(__pyx_k_tuple_102, 0, ((PyObject *)__pyx_kp_s_101)); __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_101)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_102)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":317 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":318 * self.rules.root = ExtendedTrieNode(phrase_location=PhraseLocation()) * if alignment is None: * raise Exception("Must specify an alignment object") # <<<<<<<<<<<<<< * self.alignment = alignment * */ - __pyx_k_tuple_107 = PyTuple_New(1); if (unlikely(!__pyx_k_tuple_107)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 317; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_k_tuple_107 = PyTuple_New(1); if (unlikely(!__pyx_k_tuple_107)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 318; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_k_tuple_107); __Pyx_INCREF(((PyObject *)__pyx_kp_s_106)); PyTuple_SET_ITEM(__pyx_k_tuple_107, 0, ((PyObject *)__pyx_kp_s_106)); __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_106)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_107)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1023 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":1024 * else: * #ERROR: We never get here * raise Exception("Keyword trie error") # <<<<<<<<<<<<<< * # checking whether lookup_required * if lookup_required: */ - __pyx_k_tuple_122 = PyTuple_New(1); if (unlikely(!__pyx_k_tuple_122)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1023; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_k_tuple_122 = PyTuple_New(1); if (unlikely(!__pyx_k_tuple_122)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1024; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_k_tuple_122); __Pyx_INCREF(((PyObject *)__pyx_kp_s_121)); PyTuple_SET_ITEM(__pyx_k_tuple_122, 0, ((PyObject *)__pyx_kp_s_121)); @@ -67340,7 +67396,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_138)); __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_139)); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":107 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":107 * return ALPHABET.fromstring(string, terminal) * * def make_lattice(words): # <<<<<<<<<<<<<< @@ -67367,7 +67423,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_140)); __pyx_k_codeobj_141 = (PyObject*)__Pyx_PyCode_New(1, 0, 5, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_k_tuple_140, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_142, __pyx_n_s__make_lattice, 107, __pyx_empty_bytes); if (unlikely(!__pyx_k_codeobj_141)) {__pyx_filename = __pyx_f[10]; __pyx_lineno = 107; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":111 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":111 * return tuple(((word, None, 1), ) for word in word_ids) * * def decode_lattice(lattice): # <<<<<<<<<<<<<< @@ -67388,7 +67444,7 @@ static int __Pyx_InitCachedConstants(void) { __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_143)); __pyx_k_codeobj_144 = (PyObject*)__Pyx_PyCode_New(1, 0, 3, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_k_tuple_143, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_142, __pyx_n_s__decode_lattice, 111, __pyx_empty_bytes); if (unlikely(!__pyx_k_codeobj_144)) {__pyx_filename = __pyx_f[10]; __pyx_lineno = 111; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":115 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":115 * for arc in node for node in lattice) * * def decode_sentence(lattice): # <<<<<<<<<<<<<< @@ -67627,24 +67683,24 @@ PyMODINIT_FUNC PyInit__sa(void) if (__Pyx_SetVtable(__pyx_type_3_sa_SuffixArray.tp_dict, __pyx_vtabptr_3_sa_SuffixArray) < 0) {__pyx_filename = __pyx_f[12]; __pyx_lineno = 6; __pyx_clineno = __LINE__; goto __pyx_L1_error;} if (__Pyx_SetAttrString(__pyx_m, "SuffixArray", (PyObject *)&__pyx_type_3_sa_SuffixArray) < 0) {__pyx_filename = __pyx_f[12]; __pyx_lineno = 6; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_ptype_3_sa_SuffixArray = &__pyx_type_3_sa_SuffixArray; - if (PyType_Ready(&__pyx_type_3_sa_TrieNode) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 35; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (__Pyx_SetAttrString(__pyx_m, "TrieNode", (PyObject *)&__pyx_type_3_sa_TrieNode) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 35; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyType_Ready(&__pyx_type_3_sa_TrieNode) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 36; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_SetAttrString(__pyx_m, "TrieNode", (PyObject *)&__pyx_type_3_sa_TrieNode) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 36; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_ptype_3_sa_TrieNode = &__pyx_type_3_sa_TrieNode; __pyx_type_3_sa_ExtendedTrieNode.tp_base = __pyx_ptype_3_sa_TrieNode; - if (PyType_Ready(&__pyx_type_3_sa_ExtendedTrieNode) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 41; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (__Pyx_SetAttrString(__pyx_m, "ExtendedTrieNode", (PyObject *)&__pyx_type_3_sa_ExtendedTrieNode) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 41; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyType_Ready(&__pyx_type_3_sa_ExtendedTrieNode) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 42; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_SetAttrString(__pyx_m, "ExtendedTrieNode", (PyObject *)&__pyx_type_3_sa_ExtendedTrieNode) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 42; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_ptype_3_sa_ExtendedTrieNode = &__pyx_type_3_sa_ExtendedTrieNode; - if (PyType_Ready(&__pyx_type_3_sa_TrieTable) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 52; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (__Pyx_SetAttrString(__pyx_m, "TrieTable", (PyObject *)&__pyx_type_3_sa_TrieTable) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 52; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyType_Ready(&__pyx_type_3_sa_TrieTable) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 53; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_SetAttrString(__pyx_m, "TrieTable", (PyObject *)&__pyx_type_3_sa_TrieTable) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 53; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_ptype_3_sa_TrieTable = &__pyx_type_3_sa_TrieTable; __pyx_vtabptr_3_sa_PhraseLocation = &__pyx_vtable_3_sa_PhraseLocation; __pyx_vtable_3_sa_PhraseLocation.contains = (int (*)(struct __pyx_obj_3_sa_PhraseLocation *, int))__pyx_f_3_sa_14PhraseLocation_contains; - if (PyType_Ready(&__pyx_type_3_sa_PhraseLocation) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 73; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (__Pyx_SetVtable(__pyx_type_3_sa_PhraseLocation.tp_dict, __pyx_vtabptr_3_sa_PhraseLocation) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 73; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (__Pyx_SetAttrString(__pyx_m, "PhraseLocation", (PyObject *)&__pyx_type_3_sa_PhraseLocation) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 73; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyType_Ready(&__pyx_type_3_sa_PhraseLocation) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 74; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_SetVtable(__pyx_type_3_sa_PhraseLocation.tp_dict, __pyx_vtabptr_3_sa_PhraseLocation) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 74; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_SetAttrString(__pyx_m, "PhraseLocation", (PyObject *)&__pyx_type_3_sa_PhraseLocation) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 74; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_ptype_3_sa_PhraseLocation = &__pyx_type_3_sa_PhraseLocation; - if (PyType_Ready(&__pyx_type_3_sa_Sampler) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 95; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (__Pyx_SetAttrString(__pyx_m, "Sampler", (PyObject *)&__pyx_type_3_sa_Sampler) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 95; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyType_Ready(&__pyx_type_3_sa_Sampler) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 96; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_SetAttrString(__pyx_m, "Sampler", (PyObject *)&__pyx_type_3_sa_Sampler) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 96; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_ptype_3_sa_Sampler = &__pyx_type_3_sa_Sampler; __pyx_vtabptr_3_sa_HieroCachingRuleFactory = &__pyx_vtable_3_sa_HieroCachingRuleFactory; __pyx_vtable_3_sa_HieroCachingRuleFactory.set_idmap = (PyObject *(*)(struct __pyx_obj_3_sa_HieroCachingRuleFactory *, struct __pyx_obj_3_sa_DataArray *))__pyx_f_3_sa_23HieroCachingRuleFactory_set_idmap; @@ -67662,9 +67718,9 @@ PyMODINIT_FUNC PyInit__sa(void) __pyx_vtable_3_sa_HieroCachingRuleFactory.extract_phrases = (PyObject *(*)(struct __pyx_obj_3_sa_HieroCachingRuleFactory *, int, int, int *, int *, int *, int, int, int, int *, int *, int *, int, int, int))__pyx_f_3_sa_23HieroCachingRuleFactory_extract_phrases; __pyx_vtable_3_sa_HieroCachingRuleFactory.create_alignments = (struct __pyx_obj_3_sa_IntList *(*)(struct __pyx_obj_3_sa_HieroCachingRuleFactory *, int *, int, PyObject *, PyObject *))__pyx_f_3_sa_23HieroCachingRuleFactory_create_alignments; __pyx_vtable_3_sa_HieroCachingRuleFactory.extract = (PyObject *(*)(struct __pyx_obj_3_sa_HieroCachingRuleFactory *, struct __pyx_obj_3_sa_Phrase *, struct __pyx_t_3_sa_Matching *, int *, int))__pyx_f_3_sa_23HieroCachingRuleFactory_extract; - if (PyType_Ready(&__pyx_type_3_sa_HieroCachingRuleFactory) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 217; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (__Pyx_SetVtable(__pyx_type_3_sa_HieroCachingRuleFactory.tp_dict, __pyx_vtabptr_3_sa_HieroCachingRuleFactory) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 217; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (__Pyx_SetAttrString(__pyx_m, "HieroCachingRuleFactory", (PyObject *)&__pyx_type_3_sa_HieroCachingRuleFactory) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 217; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyType_Ready(&__pyx_type_3_sa_HieroCachingRuleFactory) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_SetVtable(__pyx_type_3_sa_HieroCachingRuleFactory.tp_dict, __pyx_vtabptr_3_sa_HieroCachingRuleFactory) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_SetAttrString(__pyx_m, "HieroCachingRuleFactory", (PyObject *)&__pyx_type_3_sa_HieroCachingRuleFactory) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_ptype_3_sa_HieroCachingRuleFactory = &__pyx_type_3_sa_HieroCachingRuleFactory; __pyx_vtabptr_3_sa_Scorer = &__pyx_vtable_3_sa_Scorer; __pyx_vtable_3_sa_Scorer.score = (struct __pyx_obj_3_sa_FeatureVector *(*)(struct __pyx_obj_3_sa_Scorer *, PyObject *))__pyx_f_3_sa_6Scorer_score; @@ -67702,7 +67758,7 @@ PyMODINIT_FUNC PyInit__sa(void) __pyx_ptype_3_sa___pyx_scope_struct_13_genexpr = &__pyx_type_3_sa___pyx_scope_struct_13_genexpr; if (PyType_Ready(&__pyx_type_3_sa___pyx_scope_struct_14_alignments) < 0) {__pyx_filename = __pyx_f[7]; __pyx_lineno = 190; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_ptype_3_sa___pyx_scope_struct_14_alignments = &__pyx_type_3_sa___pyx_scope_struct_14_alignments; - if (PyType_Ready(&__pyx_type_3_sa___pyx_scope_struct_15_input) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 938; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyType_Ready(&__pyx_type_3_sa___pyx_scope_struct_15_input) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 939; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_ptype_3_sa___pyx_scope_struct_15_input = &__pyx_type_3_sa___pyx_scope_struct_15_input; if (PyType_Ready(&__pyx_type_3_sa___pyx_scope_struct_16___iter__) < 0) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 15; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_ptype_3_sa___pyx_scope_struct_16___iter__ = &__pyx_type_3_sa___pyx_scope_struct_16___iter__; @@ -67778,7 +67834,7 @@ PyMODINIT_FUNC PyInit__sa(void) if (PyObject_SetAttr(__pyx_m, __pyx_n_s__logger, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 15; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":54 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/bilex.pxi":54 * cdef id2eword, id2fword, eword2id, fword2id * * def __cinit__(self, from_text=None, from_data=False, from_binary=None, # <<<<<<<<<<<<<< @@ -67791,7 +67847,7 @@ PyMODINIT_FUNC PyInit__sa(void) __Pyx_GIVEREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":17 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":17 * from libc.string cimport memset * * cdef int MIN_BOTTOM_SIZE = 32 # <<<<<<<<<<<<<< @@ -67800,7 +67856,7 @@ PyMODINIT_FUNC PyInit__sa(void) */ __pyx_v_3_sa_MIN_BOTTOM_SIZE = 32; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":18 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":18 * * cdef int MIN_BOTTOM_SIZE = 32 * cdef int MIN_BOTTOM_BITS = 5 # <<<<<<<<<<<<<< @@ -67809,7 +67865,7 @@ PyMODINIT_FUNC PyInit__sa(void) */ __pyx_v_3_sa_MIN_BOTTOM_BITS = 5; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/veb.pxi":28 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/veb.pxi":28 * LOWER_MASK[i] = mask * * _init_lower_mask() # <<<<<<<<<<<<<< @@ -67818,7 +67874,7 @@ PyMODINIT_FUNC PyInit__sa(void) */ __pyx_f_3_sa__init_lower_mask(); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":4 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":4 * from libc.stdlib cimport malloc, realloc, strtol * * cdef int INDEX_SHIFT = 3 # <<<<<<<<<<<<<< @@ -67827,7 +67883,7 @@ PyMODINIT_FUNC PyInit__sa(void) */ __pyx_v_3_sa_INDEX_SHIFT = 3; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":5 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":5 * * cdef int INDEX_SHIFT = 3 * cdef int INDEX_MASK = (1<<INDEX_SHIFT)-1 # <<<<<<<<<<<<<< @@ -67836,7 +67892,7 @@ PyMODINIT_FUNC PyInit__sa(void) */ __pyx_v_3_sa_INDEX_MASK = ((1 << __pyx_v_3_sa_INDEX_SHIFT) - 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":87 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":87 * return self.terminals.index(s) * * cdef Alphabet ALPHABET = Alphabet() # <<<<<<<<<<<<<< @@ -67851,7 +67907,7 @@ PyMODINIT_FUNC PyInit__sa(void) __pyx_v_3_sa_ALPHABET = ((struct __pyx_obj_3_sa_Alphabet *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":107 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/sym.pxi":107 * return ALPHABET.fromstring(string, terminal) * * def make_lattice(words): # <<<<<<<<<<<<<< @@ -67863,7 +67919,7 @@ PyMODINIT_FUNC PyInit__sa(void) if (PyObject_SetAttr(__pyx_m, __pyx_n_s__make_lattice, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[10]; 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__pyx_lineno = 6; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":12 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":12 * from libc.math cimport fmod, ceil, floor, log * * from collections import defaultdict, Counter, namedtuple # <<<<<<<<<<<<<< @@ -67957,7 +68013,7 @@ PyMODINIT_FUNC PyInit__sa(void) __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":14 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":14 * from collections import defaultdict, Counter, namedtuple * * FeatureContext = namedtuple('FeatureContext', # <<<<<<<<<<<<<< @@ -67967,14 +68023,14 @@ PyMODINIT_FUNC PyInit__sa(void) __pyx_t_2 = __Pyx_GetName(__pyx_m, __pyx_n_s__namedtuple); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 14; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":15 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":15 * * FeatureContext = namedtuple('FeatureContext', * ['fphrase', # <<<<<<<<<<<<<< * 'ephrase', * 'paircount', */ - __pyx_t_1 = PyList_New(11); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 15; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyList_New(12); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 15; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_INCREF(((PyObject *)__pyx_n_s__fphrase)); PyList_SET_ITEM(__pyx_t_1, 0, ((PyObject *)__pyx_n_s__fphrase)); @@ -67997,17 +68053,20 @@ PyMODINIT_FUNC PyInit__sa(void) __Pyx_INCREF(((PyObject *)__pyx_n_s__matches)); PyList_SET_ITEM(__pyx_t_1, 6, ((PyObject *)__pyx_n_s__matches)); __Pyx_GIVEREF(((PyObject *)__pyx_n_s__matches)); + __Pyx_INCREF(((PyObject *)__pyx_n_s__input_match)); + PyList_SET_ITEM(__pyx_t_1, 7, ((PyObject *)__pyx_n_s__input_match)); + __Pyx_GIVEREF(((PyObject *)__pyx_n_s__input_match)); __Pyx_INCREF(((PyObject *)__pyx_n_s__test_sentence)); - PyList_SET_ITEM(__pyx_t_1, 7, ((PyObject *)__pyx_n_s__test_sentence)); + PyList_SET_ITEM(__pyx_t_1, 8, ((PyObject *)__pyx_n_s__test_sentence)); __Pyx_GIVEREF(((PyObject *)__pyx_n_s__test_sentence)); __Pyx_INCREF(((PyObject *)__pyx_n_s__f_text)); - PyList_SET_ITEM(__pyx_t_1, 8, ((PyObject *)__pyx_n_s__f_text)); + PyList_SET_ITEM(__pyx_t_1, 9, ((PyObject *)__pyx_n_s__f_text)); __Pyx_GIVEREF(((PyObject *)__pyx_n_s__f_text)); __Pyx_INCREF(((PyObject *)__pyx_n_s__e_text)); - PyList_SET_ITEM(__pyx_t_1, 9, ((PyObject *)__pyx_n_s__e_text)); + PyList_SET_ITEM(__pyx_t_1, 10, ((PyObject *)__pyx_n_s__e_text)); __Pyx_GIVEREF(((PyObject *)__pyx_n_s__e_text)); __Pyx_INCREF(((PyObject *)__pyx_n_s__meta)); - PyList_SET_ITEM(__pyx_t_1, 10, ((PyObject *)__pyx_n_s__meta)); + PyList_SET_ITEM(__pyx_t_1, 11, ((PyObject *)__pyx_n_s__meta)); __Pyx_GIVEREF(((PyObject *)__pyx_n_s__meta)); __pyx_t_3 = PyTuple_New(2); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 14; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); @@ -68024,7 +68083,7 @@ PyMODINIT_FUNC PyInit__sa(void) if (PyObject_SetAttr(__pyx_m, __pyx_n_s__FeatureContext, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 14; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":28 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":29 * ]) * * cdef int PRECOMPUTE = 0 # <<<<<<<<<<<<<< @@ -68033,7 +68092,7 @@ PyMODINIT_FUNC PyInit__sa(void) */ __pyx_v_3_sa_PRECOMPUTE = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":29 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":30 * * cdef int PRECOMPUTE = 0 * cdef int MERGE = 1 # <<<<<<<<<<<<<< @@ -68042,7 +68101,7 @@ PyMODINIT_FUNC PyInit__sa(void) */ __pyx_v_3_sa_MERGE = 1; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":30 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":31 * cdef int PRECOMPUTE = 0 * cdef int MERGE = 1 * cdef int BAEZA_YATES = 2 # <<<<<<<<<<<<<< @@ -68051,7 +68110,7 @@ PyMODINIT_FUNC PyInit__sa(void) */ __pyx_v_3_sa_BAEZA_YATES = 2; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":33 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":34 * * # NOTE: was encoded as a non-terminal in the previous version * cdef int EPSILON = sym_fromstring('*EPS*', True) # <<<<<<<<<<<<<< @@ -68060,20 +68119,20 @@ PyMODINIT_FUNC PyInit__sa(void) */ __pyx_v_3_sa_EPSILON = __pyx_f_3_sa_sym_fromstring(__pyx_k_147, 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":56 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/rulefactory.pxi":57 * cdef public int count * cdef public root * def __cinit__(self, extended=False): # <<<<<<<<<<<<<< * self.count = 0 * self.extended = extended */ - __pyx_t_1 = __Pyx_PyBool_FromLong(0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 56; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyBool_FromLong(0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 57; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __pyx_k_99 = __pyx_t_1; __Pyx_GIVEREF(__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":1 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":1 * cdef StringMap FD = StringMap() # Feature name dictionary # <<<<<<<<<<<<<< * * INITIAL_CAPACITY = 7 # default number of features @@ -68086,7 +68145,7 @@ PyMODINIT_FUNC PyInit__sa(void) __pyx_v_3_sa_FD = ((struct __pyx_obj_3_sa_StringMap *)__pyx_t_1); __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":3 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":3 * cdef StringMap FD = StringMap() # Feature name dictionary * * INITIAL_CAPACITY = 7 # default number of features # <<<<<<<<<<<<<< @@ -68095,7 +68154,7 @@ PyMODINIT_FUNC PyInit__sa(void) */ if (PyObject_SetAttr(__pyx_m, __pyx_n_s__INITIAL_CAPACITY, __pyx_int_7) < 0) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 3; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/features.pxi":4 + /* "/home/hltcoe/alopez/dev/cdec/python/src/sa/features.pxi":4 * * INITIAL_CAPACITY = 7 # default number of features * INCREMENT = INITIAL_CAPACITY # double size # <<<<<<<<<<<<<< diff --git a/python/src/sa/rulefactory.pxi b/python/src/sa/rulefactory.pxi index 248105d3..5f6558b3 100644 --- a/python/src/sa/rulefactory.pxi +++ b/python/src/sa/rulefactory.pxi @@ -19,6 +19,7 @@ FeatureContext = namedtuple('FeatureContext', 'fsample_count', 'input_span', 'matches', + 'input_match', 'test_sentence', 'f_text', 'e_text', @@ -960,7 +961,7 @@ cdef class HieroCachingRuleFactory: for i in range(len(fwords)): for alt in range(0, len(fwords[i])): if fwords[i][alt][0] != EPSILON: - frontier.append((i, i, alt, 0, self.rules.root, (), False)) + frontier.append((i, i, (i,), alt, 0, self.rules.root, (), False)) xroot = None x1 = sym_setindex(self.category, 1) @@ -973,7 +974,7 @@ cdef class HieroCachingRuleFactory: for i in range(self.min_gap_size, len(fwords)): for alt in range(0, len(fwords[i])): if fwords[i][alt][0] != EPSILON: - frontier.append((i-self.min_gap_size, i, alt, self.min_gap_size, xroot, (x1,), True)) + frontier.append((i-self.min_gap_size, i, (i,), alt, self.min_gap_size, xroot, (x1,), True)) next_states = [] for i in range(len(fwords)): @@ -981,7 +982,7 @@ cdef class HieroCachingRuleFactory: while len(frontier) > 0: new_frontier = [] - for k, i, alt, pathlen, node, prefix, is_shadow_path in frontier: + for k, i, input_match, alt, pathlen, node, prefix, is_shadow_path in frontier: word_id = fwords[i][alt][0] spanlen = fwords[i][alt][2] # TODO get rid of k -- pathlen is replacing it @@ -990,7 +991,7 @@ cdef class HieroCachingRuleFactory: if i+spanlen >= len(fwords): continue for nualt in range(0,len(fwords[i+spanlen])): - frontier.append((k, i+spanlen, nualt, pathlen, node, prefix, is_shadow_path)) + frontier.append((k, i+spanlen, input_match, nualt, pathlen, node, prefix, is_shadow_path)) continue phrase = prefix + (word_id,) @@ -1106,13 +1107,14 @@ cdef class HieroCachingRuleFactory: count = len(locs) scores = self.scorer.score(FeatureContext( f, e, count, fcount[f], num_samples, - (k,i+spanlen), locs, fwords, self.fda, self.eda, + (k,i+spanlen), locs, input_match, + fwords, self.fda, self.eda, meta)) yield Rule(self.category, f, e, scores, alignment) if len(phrase) < self.max_length and i+spanlen < len(fwords) and pathlen+1 <= self.max_initial_size: for alt_id in range(len(fwords[i+spanlen])): - new_frontier.append((k, i+spanlen, alt_id, pathlen + 1, node, phrase, is_shadow_path)) + new_frontier.append((k, i+spanlen, input_match, alt_id, pathlen + 1, node, phrase, is_shadow_path)) num_subpatterns = arity if not is_shadow_path: num_subpatterns = num_subpatterns + 1 @@ -1129,7 +1131,7 @@ cdef class HieroCachingRuleFactory: nodes_isteps_away_buffer[key] = frontier_nodes for (i, alt, pathlen) in frontier_nodes: - new_frontier.append((k, i, alt, pathlen, xnode, phrase +(xcat,), is_shadow_path)) + new_frontier.append((k, i, input_match + (i,), alt, pathlen, xnode, phrase +(xcat,), is_shadow_path)) frontier = new_frontier stop_time = monitor_cpu() |