#include "hg_io.h" #include #include #include #include "tdict.h" #include "json_parse.h" #include "hg.h" using namespace std; struct HGReader : public JSONParser { HGReader(Hypergraph* g) : rp("[X] ||| "), state(-1), hg(*g), nodes_needed(true), edges_needed(true) { nodes = 0; edges = 0; } void CreateNode(const string& cat, const vector& in_edges) { WordID c = TD::Convert("X") * -1; if (!cat.empty()) c = TD::Convert(cat) * -1; Hypergraph::Node* node = hg.AddNode(c, ""); for (int i = 0; i < in_edges.size(); ++i) { if (in_edges[i] >= hg.edges_.size()) { cerr << "JSONParser: in_edges[" << i << "]=" << in_edges[i] << ", but hg only has " << hg.edges_.size() << " edges!\n"; abort(); } hg.ConnectEdgeToHeadNode(&hg.edges_[in_edges[i]], node); } } void CreateEdge(const TRulePtr& rule, SparseVector* feats, const SmallVector& tail) { Hypergraph::Edge* edge = hg.AddEdge(rule, tail); feats->swap(edge->feature_values_); } bool HandleJSONEvent(int type, const JSON_value* value) { switch(state) { case -1: assert(type == JSON_T_OBJECT_BEGIN); state = 0; break; case 0: if (type == JSON_T_OBJECT_END) { //cerr << "HG created\n"; // TODO, signal some kind of callback } else if (type == JSON_T_KEY) { string val = value->vu.str.value; if (val == "features") { assert(fdict.empty()); state = 1; } else if (val == "is_sorted") { state = 3; } else if (val == "rules") { assert(rules.empty()); state = 4; } else if (val == "node") { state = 8; } else if (val == "edges") { state = 13; } else { cerr << "Unexpected key: " << val << endl; return false; } } break; // features case 1: if(type == JSON_T_NULL) { state = 0; break; } assert(type == JSON_T_ARRAY_BEGIN); state = 2; break; case 2: if(type == JSON_T_ARRAY_END) { state = 0; break; } assert(type == JSON_T_STRING); fdict.push_back(FD::Convert(value->vu.str.value)); break; // is_sorted case 3: assert(type == JSON_T_TRUE || type == JSON_T_FALSE); is_sorted = (type == JSON_T_TRUE); if (!is_sorted) { cerr << "[WARNING] is_sorted flag is ignored\n"; } state = 0; break; // rules case 4: if(type == JSON_T_NULL) { state = 0; break; } assert(type == JSON_T_ARRAY_BEGIN); state = 5; break; case 5: if(type == JSON_T_ARRAY_END) { state = 0; break; } assert(type == JSON_T_INTEGER); state = 6; rule_id = value->vu.integer_value; break; case 6: assert(type == JSON_T_STRING); rules[rule_id] = TRulePtr(new TRule(value->vu.str.value)); state = 5; break; // Nodes case 8: assert(type == JSON_T_OBJECT_BEGIN); ++nodes; in_edges.clear(); cat.clear(); state = 9; break; case 9: if (type == JSON_T_OBJECT_END) { //cerr << "Creating NODE\n"; CreateNode(cat, in_edges); state = 0; break; } assert(type == JSON_T_KEY); cur_key = value->vu.str.value; if (cur_key == "cat") { assert(cat.empty()); state = 10; break; } if (cur_key == "in_edges") { assert(in_edges.empty()); state = 11; break; } cerr << "Syntax error: unexpected key " << cur_key << " in node specification.\n"; return false; case 10: assert(type == JSON_T_STRING || type == JSON_T_NULL); cat = value->vu.str.value; state = 9; break; case 11: if (type == JSON_T_NULL) { state = 9; break; } assert(type == JSON_T_ARRAY_BEGIN); state = 12; break; case 12: if (type == JSON_T_ARRAY_END) { state = 9; break; } assert(type == JSON_T_INTEGER); //cerr << "in_edges: " << value->vu.integer_value << endl; in_edges.push_back(value->vu.integer_value); break; // "edges": [ { "tail": null, "feats" : [0,1.63,1,-0.54], "rule": 12}, // { "tail": null, "feats" : [0,0.87,1,0.02], "rule": 17}, // { "tail": [0], "feats" : [1,2.3,2,15.3,"ExtraFeature",1.2], "rule": 13}] case 13: assert(type == JSON_T_ARRAY_BEGIN); state = 14; break; case 14: if (type == JSON_T_ARRAY_END) { state = 0; break; } assert(type == JSON_T_OBJECT_BEGIN); //cerr << "New edge\n"; ++edges; cur_rule.reset(); feats.clear(); tail.clear(); state = 15; break; case 15: if (type == JSON_T_OBJECT_END) { CreateEdge(cur_rule, &feats, tail); state = 14; break; } assert(type == JSON_T_KEY); cur_key = value->vu.str.value; //cerr << "edge key " << cur_key << endl; if (cur_key == "rule") { assert(!cur_rule); state = 16; break; } if (cur_key == "feats") { assert(feats.empty()); state = 17; break; } if (cur_key == "tail") { assert(tail.empty()); state = 20; break; } cerr << "Unexpected key " << cur_key << " in edge specification\n"; return false; case 16: // edge.rule if (type == JSON_T_INTEGER) { int rule_id = value->vu.integer_value; if (rules.find(rule_id) == rules.end()) { // rules list must come before the edge definitions! cerr << "Rule_id " << rule_id << " given but only loaded " << rules.size() << " rules\n"; return false; } cur_rule = rules[rule_id]; } else if (type == JSON_T_STRING) { cur_rule.reset(new TRule(value->vu.str.value)); } else { cerr << "Rule must be either a rule id or a rule string" << endl; return false; } // cerr << "Edge: rule=" << cur_rule->AsString() << endl; state = 15; break; case 17: // edge.feats if (type == JSON_T_NULL) { state = 15; break; } assert(type == JSON_T_ARRAY_BEGIN); state = 18; break; case 18: if (type == JSON_T_ARRAY_END) { state = 15; break; } if (type != JSON_T_INTEGER && type != JSON_T_STRING) { cerr << "Unexpected feature id type\n"; return false; } if (type == JSON_T_INTEGER) { fid = value->vu.integer_value; assert(fid < fdict.size()); fid = fdict[fid]; } else if (JSON_T_STRING) { fid = FD::Convert(value->vu.str.value); } else { abort(); } state = 19; break; case 19: { assert(type == JSON_T_INTEGER || type == JSON_T_FLOAT); double val = (type == JSON_T_INTEGER ? static_cast(value->vu.integer_value) : strtod(value->vu.str.value, NULL)); feats.set_value(fid, val); state = 18; break; } case 20: // edge.tail if (type == JSON_T_NULL) { state = 15; break; } assert(type == JSON_T_ARRAY_BEGIN); state = 21; break; case 21: if (type == JSON_T_ARRAY_END) { state = 15; break; } assert(type == JSON_T_INTEGER); tail.push_back(value->vu.integer_value); break; } return true; } string rp; string cat; SmallVector tail; vector in_edges; TRulePtr cur_rule; map rules; vector fdict; SparseVector feats; int state; int fid; int nodes; int edges; string cur_key; Hypergraph& hg; int rule_id; bool nodes_needed; bool edges_needed; bool is_sorted; }; bool HypergraphIO::ReadFromJSON(istream* in, Hypergraph* hg) { hg->clear(); HGReader reader(hg); return reader.Parse(in); } static void WriteRule(const TRule& r, ostream* out) { if (!r.lhs_) { (*out) << "[X] ||| "; } JSONParser::WriteEscapedString(r.AsString(), out); } bool HypergraphIO::WriteToJSON(const Hypergraph& hg, bool remove_rules, ostream* out) { map rid; ostream& o = *out; rid[NULL] = 0; o << '{'; if (!remove_rules) { o << "\"rules\":["; for (int i = 0; i < hg.edges_.size(); ++i) { const TRule* r = hg.edges_[i].rule_.get(); int &id = rid[r]; if (!id) { id=rid.size() - 1; if (id > 1) o << ','; o << id << ','; WriteRule(*r, &o); }; } o << "],"; } const bool use_fdict = FD::NumFeats() < 1000; if (use_fdict) { o << "\"features\":["; for (int i = 1; i < FD::NumFeats(); ++i) { o << (i==1 ? "":",") << '"' << FD::Convert(i) << '"'; } o << "],"; } vector edgemap(hg.edges_.size(), -1); // edges may be in non-topo order int edge_count = 0; for (int i = 0; i < hg.nodes_.size(); ++i) { const Hypergraph::Node& node = hg.nodes_[i]; if (i > 0) { o << ","; } o << "\"edges\":["; for (int j = 0; j < node.in_edges_.size(); ++j) { const Hypergraph::Edge& edge = hg.edges_[node.in_edges_[j]]; edgemap[edge.id_] = edge_count; ++edge_count; o << (j == 0 ? "" : ",") << "{"; o << "\"tail\":["; for (int k = 0; k < edge.tail_nodes_.size(); ++k) { o << (k > 0 ? "," : "") << edge.tail_nodes_[k]; } o << "],"; o << "\"feats\":["; bool first = true; for (SparseVector::const_iterator it = edge.feature_values_.begin(); it != edge.feature_values_.end(); ++it) { if (!it->second) continue; if (!first) o << ','; if (use_fdict) o << (it->first - 1); else o << '"' << FD::Convert(it->first) << '"'; o << ',' << it->second; first = false; } o << "]"; if (!remove_rules) { o << ",\"rule\":" << rid[edge.rule_.get()]; } o << "}"; } o << "],"; o << "\"node\":{\"in_edges\":["; for (int j = 0; j < node.in_edges_.size(); ++j) { int mapped_edge = edgemap[node.in_edges_[j]]; assert(mapped_edge >= 0); o << (j == 0 ? "" : ",") << mapped_edge; } o << "]"; if (node.cat_ < 0) { o << ",\"cat\":\"" << TD::Convert(node.cat_ * -1) << '"'; } o << "}"; } o << "}\n"; return true; } bool needs_escape[128]; void InitEscapes() { memset(needs_escape, false, 128); needs_escape[static_cast('\'')] = true; needs_escape[static_cast('\\')] = true; } string HypergraphIO::Escape(const string& s) { size_t len = s.size(); for (int i = 0; i < s.size(); ++i) { unsigned char c = s[i]; if (c < 128 && needs_escape[c]) ++len; } if (len == s.size()) return s; string res(len, ' '); size_t o = 0; for (int i = 0; i < s.size(); ++i) { unsigned char c = s[i]; if (c < 128 && needs_escape[c]) res[o++] = '\\'; res[o++] = c; } assert(o == len); return res; } string HypergraphIO::AsPLF(const Hypergraph& hg, bool include_global_parentheses) { static bool first = true; if (first) { InitEscapes(); first = false; } if (hg.nodes_.empty()) return "()"; ostringstream os; if (include_global_parentheses) os << '('; static const string EPS="*EPS*"; for (int i = 0; i < hg.nodes_.size()-1; ++i) { if (hg.nodes_[i].out_edges_.empty()) abort(); const bool last_node = (i == hg.nodes_.size() - 2); const int out_edges_size = hg.nodes_[i].out_edges_.size(); // compound splitter adds an extra goal transition which we suppress with // the following conditional if (!last_node || out_edges_size != 1 || hg.edges_[hg.nodes_[i].out_edges_[0]].rule_->EWords() == 1) { os << '('; for (int j = 0; j < out_edges_size; ++j) { const Hypergraph::Edge& e = hg.edges_[hg.nodes_[i].out_edges_[j]]; const string output = e.rule_->e_.size() ==2 ? Escape(TD::Convert(e.rule_->e_[1])) : EPS; double prob = log(e.edge_prob_); if (isinf(prob)) { prob = -9e20; } if (isnan(prob)) { prob = 0; } os << "('" << output << "'," << prob << "," << e.head_node_ - i << "),"; } os << "),"; } } if (include_global_parentheses) os << ')'; return os.str(); } namespace PLF { const string chars = "'\\"; const char& quote = chars[0]; const char& slash = chars[1]; // safe get inline char get(const std::string& in, int c) { if (c < 0 || c >= (int)in.size()) return 0; else return in[(size_t)c]; } // consume whitespace inline void eatws(const std::string& in, int& c) { while (get(in,c) == ' ') { c++; } } // from 'foo' return foo std::string getEscapedString(const std::string& in, int &c) { eatws(in,c); if (get(in,c++) != quote) return "ERROR"; std::string res; char cur = 0; do { cur = get(in,c++); if (cur == slash) { res += get(in,c++); } else if (cur != quote) { res += cur; } } while (get(in,c) != quote && (c < (int)in.size())); c++; eatws(in,c); return res; } // basically atof float getFloat(const std::string& in, int &c) { std::string tmp; eatws(in,c); while (c < (int)in.size() && get(in,c) != ' ' && get(in,c) != ')' && get(in,c) != ',') { tmp += get(in,c++); } eatws(in,c); if (tmp.empty()) { cerr << "Syntax error while reading number! col=" << c << endl; abort(); } return atof(tmp.c_str()); } // basically atoi int getInt(const std::string& in, int &c) { std::string tmp; eatws(in,c); while (c < (int)in.size() && get(in,c) != ' ' && get(in,c) != ')' && get(in,c) != ',') { tmp += get(in,c++); } eatws(in,c); return atoi(tmp.c_str()); } // maximum number of nodes permitted #define MAX_NODES 100000000 // parse ('foo', 0.23) void ReadPLFEdge(const std::string& in, int &c, int cur_node, Hypergraph* hg) { if (get(in,c++) != '(') { assert(!"PCN/PLF parse error: expected ( at start of cn alt block\n"); } vector ewords(2, 0); ewords[1] = TD::Convert(getEscapedString(in,c)); TRulePtr r(new TRule(ewords)); r->ComputeArity(); // cerr << "RULE: " << r->AsString() << endl; if (get(in,c++) != ',') { assert(!"PCN/PLF parse error: expected , after string\n"); } size_t cnNext = 1; std::vector probs; probs.push_back(getFloat(in,c)); while (get(in,c) == ',') { c++; float val = getFloat(in,c); probs.push_back(val); // cerr << val << endl; //REMO } //if we read more than one prob, this was a lattice, last item was column increment if (probs.size()>1) { cnNext = static_cast(probs.back()); probs.pop_back(); if (cnNext < 1) { cerr << cnNext << endl; assert(!"PCN/PLF parse error: bad link length at last element of cn alt block\n"); } } if (get(in,c++) != ')') { assert(!"PCN/PLF parse error: expected ) at end of cn alt block\n"); } eatws(in,c); Hypergraph::TailNodeVector tail(1, cur_node); Hypergraph::Edge* edge = hg->AddEdge(r, tail); //cerr << " <--" << cur_node << endl; int head_node = cur_node + cnNext; assert(head_node < MAX_NODES); // prevent malicious PLFs from using all the memory if (hg->nodes_.size() < (head_node + 1)) { hg->ResizeNodes(head_node + 1); } hg->ConnectEdgeToHeadNode(edge, &hg->nodes_[head_node]); for (int i = 0; i < probs.size(); ++i) edge->feature_values_.set_value(FD::Convert("Feature_" + boost::lexical_cast(i)), probs[i]); } // parse (('foo', 0.23), ('bar', 0.77)) void ReadPLFNode(const std::string& in, int &c, int cur_node, int line, Hypergraph* hg) { //cerr << "PLF READING NODE " << cur_node << endl; if (hg->nodes_.size() < (cur_node + 1)) { hg->ResizeNodes(cur_node + 1); } if (get(in,c++) != '(') { cerr << line << ": Syntax error 1\n"; abort(); } eatws(in,c); while (1) { if (c > (int)in.size()) { break; } if (get(in,c) == ')') { c++; eatws(in,c); break; } if (get(in,c) == ',' && get(in,c+1) == ')') { c+=2; eatws(in,c); break; } if (get(in,c) == ',') { c++; eatws(in,c); } ReadPLFEdge(in, c, cur_node, hg); } } } // namespace PLF void HypergraphIO::ReadFromPLF(const std::string& in, Hypergraph* hg, int line) { hg->clear(); int c = 0; int cur_node = 0; if (in[c++] != '(') { cerr << line << ": Syntax error!\n"; abort(); } while (1) { if (c > (int)in.size()) { break; } if (PLF::get(in,c) == ')') { c++; PLF::eatws(in,c); break; } if (PLF::get(in,c) == ',' && PLF::get(in,c+1) == ')') { c+=2; PLF::eatws(in,c); break; } if (PLF::get(in,c) == ',') { c++; PLF::eatws(in,c); } PLF::ReadPLFNode(in, c, cur_node, line, hg); ++cur_node; } assert(cur_node == hg->nodes_.size() - 1); } void HypergraphIO::PLFtoLattice(const string& plf, Lattice* pl) { Lattice& l = *pl; Hypergraph g; ReadFromPLF(plf, &g, 0); const int num_nodes = g.nodes_.size() - 1; l.resize(num_nodes); for (int i = 0; i < num_nodes; ++i) { vector& alts = l[i]; const Hypergraph::Node& node = g.nodes_[i]; const int num_alts = node.out_edges_.size(); alts.resize(num_alts); for (int j = 0; j < num_alts; ++j) { const Hypergraph::Edge& edge = g.edges_[node.out_edges_[j]]; alts[j].label = edge.rule_->e_[1]; alts[j].cost = edge.feature_values_.value(FD::Convert("Feature_0")); alts[j].dist2next = edge.head_node_ - node.id_; } } } namespace B64 { static const char cb64[]="ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyz0123456789+/"; static const char cd64[]="|$$$}rstuvwxyz{$$$$$$$>?@ABCDEFGHIJKLMNOPQRSTUVW$$$$$$XYZ[\\]^_`abcdefghijklmnopq"; static void encodeblock(const unsigned char* in, ostream* os, int len) { char out[4]; out[0] = cb64[ in[0] >> 2 ]; out[1] = cb64[ ((in[0] & 0x03) << 4) | ((in[1] & 0xf0) >> 4) ]; out[2] = (len > 1 ? cb64[ ((in[1] & 0x0f) << 2) | ((in[2] & 0xc0) >> 6) ] : '='); out[3] = (len > 2 ? cb64[ in[2] & 0x3f ] : '='); os->write(out, 4); } void b64encode(const char* data, const size_t size, ostream* out) { size_t cur = 0; while(cur < size) { int len = min(static_cast(3), size - cur); encodeblock(reinterpret_cast(&data[cur]), out, len); cur += len; } } static void decodeblock(const unsigned char* in, unsigned char* out) { out[0] = (unsigned char ) (in[0] << 2 | in[1] >> 4); out[1] = (unsigned char ) (in[1] << 4 | in[2] >> 2); out[2] = (unsigned char ) (((in[2] << 6) & 0xc0) | in[3]); } bool b64decode(const unsigned char* data, const size_t insize, char* out, const size_t outsize) { size_t cur = 0; size_t ocur = 0; unsigned char in[4]; while(cur < insize) { assert(ocur < outsize); for (int i = 0; i < 4; ++i) { unsigned char v = data[cur]; v = (unsigned char) ((v < 43 || v > 122) ? '\0' : cd64[ v - 43 ]); if (!v) { cerr << "B64 decode error at offset " << cur << " offending character: " << (int)data[cur] << endl; return false; } v = (unsigned char) ((v == '$') ? '\0' : v - 61); if (v) in[i] = v - 1; else in[i] = 0; ++cur; } decodeblock(in, reinterpret_cast(&out[ocur])); ocur += 3; } return true; } }