From 455ca8bc1406ec2f6554fce9be7488bb3cca75dd Mon Sep 17 00:00:00 2001 From: Victor Chahuneau Date: Fri, 27 Jul 2012 23:33:45 -0400 Subject: [python] Move python files to avoid pythonpath conflicts --- python/pkg/cdec/sa/__init__.py | 4 ++ python/pkg/cdec/sa/compile.py | 94 +++++++++++++++++++++++++++++++++++++++++ python/pkg/cdec/sa/extract.py | 31 ++++++++++++++ python/pkg/cdec/sa/extractor.py | 78 ++++++++++++++++++++++++++++++++++ python/pkg/cdec/sa/features.py | 57 +++++++++++++++++++++++++ 5 files changed, 264 insertions(+) create mode 100644 python/pkg/cdec/sa/__init__.py create mode 100644 python/pkg/cdec/sa/compile.py create mode 100644 python/pkg/cdec/sa/extract.py create mode 100644 python/pkg/cdec/sa/extractor.py create mode 100644 python/pkg/cdec/sa/features.py (limited to 'python/pkg/cdec/sa') diff --git a/python/pkg/cdec/sa/__init__.py b/python/pkg/cdec/sa/__init__.py new file mode 100644 index 00000000..fd4a4148 --- /dev/null +++ b/python/pkg/cdec/sa/__init__.py @@ -0,0 +1,4 @@ +from cdec.sa._sa import sym_fromstring,\ + SuffixArray, DataArray, LCP, Precomputation, Alignment, BiLex,\ + HieroCachingRuleFactory, Sampler +from cdec.sa.extractor import GrammarExtractor diff --git a/python/pkg/cdec/sa/compile.py b/python/pkg/cdec/sa/compile.py new file mode 100644 index 00000000..30e605a6 --- /dev/null +++ b/python/pkg/cdec/sa/compile.py @@ -0,0 +1,94 @@ +#!/usr/bin/env python +import argparse +import os +import logging +import cdec.configobj +import cdec.sa + +MAX_PHRASE_LENGTH = 4 +def precompute(f_sa, max_len, max_nt, max_size, min_gap, rank1, rank2): + lcp = cdec.sa.LCP(f_sa) + stats = sorted(lcp.compute_stats(MAX_PHRASE_LENGTH), reverse=True) + precomp = cdec.sa.Precomputation(from_stats=stats, + fsarray=f_sa, + precompute_rank=rank1, + precompute_secondary_rank=rank2, + max_length=max_len, + max_nonterminals=max_nt, + train_max_initial_size=max_size, + train_min_gap_size=min_gap) + return precomp + +def main(): + logging.basicConfig(level=logging.INFO) + logger = logging.getLogger('cdec.sa.compile') + parser = argparse.ArgumentParser(description='Compile a corpus into a suffix array.') + parser.add_argument('--maxnt', '-n', type=int, default=2, + help='Maximum number of non-terminal symbols') + parser.add_argument('--maxlen', '-l', type=int, default=5, + help='Maximum number of terminals') + parser.add_argument('--maxsize', '-s', type=int, default=15, + help='Maximum rule span') + parser.add_argument('--mingap', '-g', type=int, default=1, + help='Minimum gap size') + parser.add_argument('--rank1', '-r1', type=int, default=100, + help='Number of pre-computed frequent patterns') + parser.add_argument('--rank2', '-r2', type=int, default=10, + help='Number of pre-computed super-frequent patterns)') + parser.add_argument('-c', '--config', default='/dev/stdout', + help='Output configuration') + parser.add_argument('-o', '--output', required=True, + help='Output path') + parser.add_argument('-f', '--source', required=True, + help='Source language corpus') + parser.add_argument('-e', '--target', required=True, + help='Target language corpus') + parser.add_argument('-a', '--alignment', required=True, + help='Bitext word alignment') + args = parser.parse_args() + + param_names = ("max_len", "max_nt", "max_size", "min_gap", "rank1", "rank2") + params = (args.maxlen, args.maxnt, args.maxsize, args.mingap, args.rank1, args.rank2) + + if not os.path.exists(args.output): + os.mkdir(args.output) + + f_sa_bin = os.path.join(args.output, 'f.sa.bin') + e_bin = os.path.join(args.output, 'e.bin') + precomp_file = 'precomp.{0}.{1}.{2}.{3}.{4}.{5}.bin'.format(*params) + precomp_bin = os.path.join(args.output, precomp_file) + a_bin = os.path.join(args.output, 'a.bin') + lex_bin = os.path.join(args.output, 'lex.bin') + + logger.info('Compiling source suffix array') + f_sa = cdec.sa.SuffixArray(from_text=args.source) + f_sa.write_binary(f_sa_bin) + + logger.info('Compiling target data array') + e = cdec.sa.DataArray(from_text=args.target) + e.write_binary(e_bin) + + logger.info('Precomputing frequent phrases') + precompute(f_sa, *params).write_binary(precomp_bin) + + logger.info('Compiling alignment') + a = cdec.sa.Alignment(from_text=args.alignment) + a.write_binary(a_bin) + + logger.info('Compiling bilexical dictionary') + lex = cdec.sa.BiLex(from_data=True, alignment=a, earray=e, fsarray=f_sa) + lex.write_binary(lex_bin) + + # Write configuration + config = cdec.configobj.ConfigObj(args.config, unrepr=True) + config['f_sa_file'] = f_sa_bin + config['e_file'] = e_bin + config['a_file'] = a_bin + config['lex_file'] = lex_bin + config['precompute_file'] = precomp_bin + for name, value in zip(param_names, params): + config[name] = value + config.write() + +if __name__ == '__main__': + main() diff --git a/python/pkg/cdec/sa/extract.py b/python/pkg/cdec/sa/extract.py new file mode 100644 index 00000000..918aa3bb --- /dev/null +++ b/python/pkg/cdec/sa/extract.py @@ -0,0 +1,31 @@ +#!/usr/bin/env python +import sys +import os +import argparse +import logging +import cdec.sa + +def main(): + logging.basicConfig(level=logging.INFO) + parser = argparse.ArgumentParser(description='Extract grammars from a compiled corpus.') + parser.add_argument('-c', '--config', required=True, + help='Extractor configuration') + parser.add_argument('-g', '--grammars', required=True, + help='Grammar output path') + args = parser.parse_args() + + if not os.path.exists(args.grammars): + os.mkdir(args.grammars) + + extractor = cdec.sa.GrammarExtractor(args.config) + for i, sentence in enumerate(sys.stdin): + sentence = sentence[:-1] + grammar_file = os.path.join(args.grammars, 'grammar.{0}'.format(i)) + with open(grammar_file, 'w') as output: + for rule in extractor.grammar(sentence): + output.write(str(rule)+'\n') + grammar_file = os.path.abspath(grammar_file) + print('{1}'.format(grammar_file, sentence)) + +if __name__ == '__main__': + main() diff --git a/python/pkg/cdec/sa/extractor.py b/python/pkg/cdec/sa/extractor.py new file mode 100644 index 00000000..bb912e16 --- /dev/null +++ b/python/pkg/cdec/sa/extractor.py @@ -0,0 +1,78 @@ +from itertools import chain +import os +import cdec.configobj +from cdec.sa.features import EgivenFCoherent, SampleCountF, CountEF,\ + MaxLexEgivenF, MaxLexFgivenE, IsSingletonF, IsSingletonFE +import cdec.sa + +# maximum span of a grammar rule in TEST DATA +MAX_INITIAL_SIZE = 15 + +class GrammarExtractor: + def __init__(self, config): + if isinstance(config, str) or isinstance(config, unicode): + if not os.path.exists(config): + raise IOError('cannot read configuration from {0}'.format(config)) + config = cdec.configobj.ConfigObj(config, unrepr=True) + alignment = cdec.sa.Alignment(from_binary=config['a_file']) + self.factory = cdec.sa.HieroCachingRuleFactory( + # compiled alignment object (REQUIRED) + alignment, + # name of generic nonterminal used by Hiero + category="[X]", + # maximum number of contiguous chunks of terminal symbols in RHS of a rule + max_chunks=config['max_nt']+1, + # maximum span of a grammar rule in TEST DATA + max_initial_size=MAX_INITIAL_SIZE, + # maximum number of symbols (both T and NT) allowed in a rule + max_length=config['max_len'], + # maximum number of nonterminals allowed in a rule (set >2 at your own risk) + max_nonterminals=config['max_nt'], + # maximum number of contiguous chunks of terminal symbols + # in target-side RHS of a rule. + max_target_chunks=config['max_nt']+1, + # maximum number of target side symbols (both T and NT) allowed in a rule. + max_target_length=MAX_INITIAL_SIZE, + # minimum span of a nonterminal in the RHS of a rule in TEST DATA + min_gap_size=1, + # filename of file containing precomputed collocations + precompute_file=config['precompute_file'], + # maximum frequency rank of patterns used to compute triples (< 20) + precompute_secondary_rank=config['rank2'], + # maximum frequency rank of patterns used to compute collocations (< 300) + precompute_rank=config['rank1'], + # require extracted rules to have at least one aligned word + require_aligned_terminal=True, + # require each contiguous chunk of extracted rules + # to have at least one aligned word + require_aligned_chunks=False, + # maximum span of a grammar rule extracted from TRAINING DATA + train_max_initial_size=config['max_size'], + # minimum span of an RHS nonterminal in a rule extracted from TRAINING DATA + train_min_gap_size=config['min_gap'], + # True if phrases should be tight, False otherwise (better but slower) + tight_phrases=True, + ) + + # lexical weighting tables + tt = cdec.sa.BiLex(from_binary=config['lex_file']) + + self.models = (EgivenFCoherent, SampleCountF, CountEF, + MaxLexFgivenE(tt), MaxLexEgivenF(tt), IsSingletonF, IsSingletonFE) + + fsarray = cdec.sa.SuffixArray(from_binary=config['f_sa_file']) + edarray = cdec.sa.DataArray(from_binary=config['e_file']) + + # lower=faster, higher=better; improvements level off above 200-300 range, + # -1 = don't sample, use all data (VERY SLOW!) + sampler = cdec.sa.Sampler(300, fsarray) + + self.factory.configure(fsarray, edarray, sampler) + + def grammar(self, sentence): + if isinstance(sentence, unicode): + sentence = sentence.encode('utf8') + cnet = chain(('',), sentence.split(), ('',)) + cnet = (cdec.sa.sym_fromstring(word, terminal=True) for word in cnet) + cnet = tuple(((word, None, 1), ) for word in cnet) + return self.factory.input(cnet, self.models) diff --git a/python/pkg/cdec/sa/features.py b/python/pkg/cdec/sa/features.py new file mode 100644 index 00000000..325b9e13 --- /dev/null +++ b/python/pkg/cdec/sa/features.py @@ -0,0 +1,57 @@ +from __future__ import division +import math + +MAXSCORE = 99 + +def EgivenF(fphrase, ephrase, paircount, fcount, fsample_count): # p(e|f) + return -math.log10(paircount/fcount) + +def CountEF(fphrase, ephrase, paircount, fcount, fsample_count): + return math.log10(1 + paircount) + +def SampleCountF(fphrase, ephrase, paircount, fcount, fsample_count): + return math.log10(1 + fsample_count) + +def EgivenFCoherent(fphrase, ephrase, paircount, fcount, fsample_count): + prob = paircount/fsample_count + return -math.log10(prob) if prob > 0 else MAXSCORE + +def CoherenceProb(fphrase, ephrase, paircount, fcount, fsample_count): + return -math.log10(fcount/fsample_count) + +def MaxLexEgivenF(ttable): + def feature(fphrase, ephrase, paircount, fcount, fsample_count): + fwords = fphrase.words + fwords.append('NULL') + def score(): + for e in ephrase.words: + maxScore = max(ttable.get_score(f, e, 0) for f in fwords) + yield -math.log10(maxScore) if maxScore > 0 else MAXSCORE + return sum(score()) + return feature + +def MaxLexFgivenE(ttable): + def feature(fphrase, ephrase, paircount, fcount, fsample_count): + ewords = ephrase.words + ewords.append('NULL') + def score(): + for f in fphrase.words: + maxScore = max(ttable.get_score(f, e, 1) for e in ewords) + yield -math.log10(maxScore) if maxScore > 0 else MAXSCORE + return sum(score()) + return feature + +def IsSingletonF(fphrase, ephrase, paircount, fcount, fsample_count): + return (fcount == 1) + +def IsSingletonFE(fphrase, ephrase, paircount, fcount, fsample_count): + return (paircount == 1) + +def IsNotSingletonF(fphrase, ephrase, paircount, fcount, fsample_count): + return (fcount > 1) + +def IsNotSingletonFE(fphrase, ephrase, paircount, fcount, fsample_count): + return (paircount > 1) + +def IsFEGreaterThanZero(fphrase, ephrase, paircount, fcount, fsample_count): + return (paircount > 0.01) -- cgit v1.2.3 From 2ed119792bc81f56b682613cbacab8aef8a693da Mon Sep 17 00:00:00 2001 From: Victor Chahuneau Date: Sat, 28 Jul 2012 17:12:40 -0400 Subject: [python] Suffix array compiler can read bitext (-b) --- python/pkg/cdec/sa/compile.py | 24 +- python/src/cdec.sa._sa.pxd | 1 + python/src/sa/_sa.c | 4291 +++++++++++++++++++++++++--------------- python/src/sa/data_array.pxi | 38 +- python/src/sa/suffix_array.pxi | 8 +- 5 files changed, 2780 insertions(+), 1582 deletions(-) create mode 120000 python/src/cdec.sa._sa.pxd (limited to 'python/pkg/cdec/sa') diff --git a/python/pkg/cdec/sa/compile.py b/python/pkg/cdec/sa/compile.py index 30e605a6..2a89243b 100644 --- a/python/pkg/cdec/sa/compile.py +++ b/python/pkg/cdec/sa/compile.py @@ -37,16 +37,22 @@ def main(): help='Number of pre-computed super-frequent patterns)') parser.add_argument('-c', '--config', default='/dev/stdout', help='Output configuration') - parser.add_argument('-o', '--output', required=True, - help='Output path') - parser.add_argument('-f', '--source', required=True, + parser.add_argument('-f', '--source', help='Source language corpus') - parser.add_argument('-e', '--target', required=True, + parser.add_argument('-e', '--target', help='Target language corpus') + parser.add_argument('-b', '--bitext', + help='Parallel text (source ||| target)') parser.add_argument('-a', '--alignment', required=True, help='Bitext word alignment') + parser.add_argument('-o', '--output', required=True, + help='Output path') args = parser.parse_args() + if not ((args.source and args.target) or args.bitext): + parser.error('a parallel corpus is required\n' + '\tuse -f (source) with -e (target) or -b (bitext)') + param_names = ("max_len", "max_nt", "max_size", "min_gap", "rank1", "rank2") params = (args.maxlen, args.maxnt, args.maxsize, args.mingap, args.rank1, args.rank2) @@ -61,11 +67,17 @@ def main(): lex_bin = os.path.join(args.output, 'lex.bin') logger.info('Compiling source suffix array') - f_sa = cdec.sa.SuffixArray(from_text=args.source) + if args.bitext: + f_sa = cdec.sa.SuffixArray(from_text=args.bitext, side='source') + else: + f_sa = cdec.sa.SuffixArray(from_text=args.source) f_sa.write_binary(f_sa_bin) logger.info('Compiling target data array') - e = cdec.sa.DataArray(from_text=args.target) + if args.bitext: + e = cdec.sa.DataArray(from_text=args.bitext, side='target') + else: + e = cdec.sa.DataArray(from_text=args.target) e.write_binary(e_bin) logger.info('Precomputing frequent phrases') diff --git a/python/src/cdec.sa._sa.pxd b/python/src/cdec.sa._sa.pxd new file mode 120000 index 00000000..3613f643 --- /dev/null +++ b/python/src/cdec.sa._sa.pxd @@ -0,0 +1 @@ +sa/_sa.pxd \ No newline at end of file diff --git a/python/src/sa/_sa.c b/python/src/sa/_sa.c index b7f3627a..0f9b0d22 100644 --- a/python/src/sa/_sa.c +++ b/python/src/sa/_sa.c @@ -1,4 +1,4 @@ -/* Generated by Cython 0.17.beta1 on Fri Jul 27 23:31:04 2012 */ +/* Generated by Cython 0.17.beta1 on Sat Jul 28 17:07:03 2012 */ #define PY_SSIZE_T_CLEAN #include "Python.h" @@ -383,6 +383,7 @@ static const char *__pyx_f[] = { /*--- Type declarations ---*/ struct __pyx_obj_3_sa_HieroCachingRuleFactory; +struct __pyx_obj_3_sa___pyx_scope_struct_2_compute_stats; struct __pyx_obj_3_sa_IntList; struct __pyx_obj_3_sa_VEBIterator; struct __pyx_obj_3_sa_BiLex; @@ -390,23 +391,24 @@ struct __pyx_obj_3_sa_VEB; struct __pyx_obj_3_sa_LCP; struct __pyx_obj_3_sa_DataArray; struct __pyx_obj_3_sa_BitSetIterator; +struct __pyx_obj_3_sa___pyx_scope_struct__read_bitext; struct __pyx_obj_3_sa_Precomputation; struct __pyx_obj_3_sa_SuffixArray; +struct __pyx_obj_3_sa___pyx_scope_struct_4_input; struct __pyx_obj_3_sa_Alphabet; struct __pyx_obj_3_sa_Rule; struct __pyx_obj_3_sa_PhraseLocation; -struct __pyx_obj_3_sa___pyx_scope_struct__compute_stats; -struct __pyx_obj_3_sa___pyx_scope_struct_2_input; +struct __pyx_obj_3_sa___pyx_scope_struct_3___iter__; struct __pyx_obj_3_sa_Alignment; struct __pyx_obj_3_sa_BitSet; struct __pyx_obj_3_sa_Sampler; struct __pyx_obj_3_sa_StringMap; -struct __pyx_obj_3_sa___pyx_scope_struct_1___iter__; struct __pyx_obj_3_sa_TrieNode; struct __pyx_obj_3_sa_ExtendedTrieNode; struct __pyx_obj_3_sa_TrieMap; struct __pyx_obj_3_sa_Phrase; struct __pyx_obj_3_sa_TrieTable; +struct __pyx_obj_3_sa___pyx_scope_struct_1_genexpr; struct __pyx_obj_3_sa_FloatList; struct __pyx_t_3_sa__node; struct __pyx_t_3_sa__BitSet; @@ -563,6 +565,37 @@ struct __pyx_obj_3_sa_HieroCachingRuleFactory { }; +/* "/Users/vchahun/Sandbox/cdec/python/src/sa/lcp.pxi":36 + * logger.info("LCP array completed") + * + * def compute_stats(self, int max_n): # <<<<<<<<<<<<<< + * """Note: the output of this function is not exact. In + * particular, the frequency associated with each word is + */ +struct __pyx_obj_3_sa___pyx_scope_struct_2_compute_stats { + PyObject_HEAD + int __pyx_v_N; + int __pyx_v_freq; + int __pyx_v_h; + int __pyx_v_i; + int __pyx_v_ii; + int __pyx_v_iii; + int __pyx_v_j; + int __pyx_v_k; + int __pyx_v_max_n; + int __pyx_v_n; + PyObject *__pyx_v_ngram; + struct __pyx_obj_3_sa_IntList *__pyx_v_ngram_start; + PyObject *__pyx_v_ngram_starts; + int __pyx_v_rs; + struct __pyx_obj_3_sa_IntList *__pyx_v_run_start; + struct __pyx_obj_3_sa_LCP *__pyx_v_self; + int __pyx_v_valid; + struct __pyx_obj_3_sa_VEB *__pyx_v_veb; + int __pyx_t_0; +}; + + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/int_list.pxi":9 * from libc.string cimport memset, memcpy * @@ -676,6 +709,20 @@ struct __pyx_obj_3_sa_BitSetIterator { }; +/* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":71 + * self.read_text_data(fp) + * + * def read_bitext(self, char* filename, int side): # <<<<<<<<<<<<<< + * with gzip_or_text(filename) as fp: + * data = (line.split(' ||| ')[side] for line in fp) + */ +struct __pyx_obj_3_sa___pyx_scope_struct__read_bitext { + PyObject_HEAD + PyObject *__pyx_v_fp; + int __pyx_v_side; +}; + + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/precomputation.pxi":188 * * @@ -713,84 +760,6 @@ struct __pyx_obj_3_sa_SuffixArray { }; -/* "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi":7 - * cdef int INDEX_MASK = (1< + +static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int equals); /*proto*/ + +static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals); /*proto*/ + +#if PY_MAJOR_VERSION >= 3 +#define __Pyx_PyString_Equals __Pyx_PyUnicode_Equals +#else +#define __Pyx_PyString_Equals __Pyx_PyBytes_Equals +#endif + static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject *); static CYTHON_INLINE unsigned short __Pyx_PyInt_AsUnsignedShort(PyObject *); @@ -1868,9 +1915,11 @@ static PyTypeObject *__pyx_ptype_3_sa_TrieTable = 0; static PyTypeObject *__pyx_ptype_3_sa_PhraseLocation = 0; static PyTypeObject *__pyx_ptype_3_sa_Sampler = 0; static PyTypeObject *__pyx_ptype_3_sa_HieroCachingRuleFactory = 0; -static PyTypeObject *__pyx_ptype_3_sa___pyx_scope_struct__compute_stats = 0; -static PyTypeObject *__pyx_ptype_3_sa___pyx_scope_struct_1___iter__ = 0; -static PyTypeObject *__pyx_ptype_3_sa___pyx_scope_struct_2_input = 0; +static PyTypeObject *__pyx_ptype_3_sa___pyx_scope_struct__read_bitext = 0; +static PyTypeObject *__pyx_ptype_3_sa___pyx_scope_struct_1_genexpr = 0; +static PyTypeObject *__pyx_ptype_3_sa___pyx_scope_struct_2_compute_stats = 0; +static PyTypeObject *__pyx_ptype_3_sa___pyx_scope_struct_3___iter__ = 0; +static PyTypeObject *__pyx_ptype_3_sa___pyx_scope_struct_4_input = 0; static int __pyx_v_3_sa_MIN_BOTTOM_SIZE; static int __pyx_v_3_sa_MIN_BOTTOM_BITS; static int __pyx_v_3_sa_LOWER_MASK[32]; @@ -1957,7 +2006,7 @@ static PyObject *__pyx_pf_3_sa_7IntList_28write(struct __pyx_obj_3_sa_IntList *_ static PyObject *__pyx_pf_3_sa_7IntList_30read(struct __pyx_obj_3_sa_IntList *__pyx_v_self, char *__pyx_v_filename); /* proto */ static int __pyx_pf_3_sa_9StringMap___cinit__(struct __pyx_obj_3_sa_StringMap *__pyx_v_self); /* proto */ static void __pyx_pf_3_sa_9StringMap_2__dealloc__(struct __pyx_obj_3_sa_StringMap *__pyx_v_self); /* proto */ -static int __pyx_pf_3_sa_9DataArray___cinit__(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, PyObject *__pyx_v_from_binary, PyObject *__pyx_v_from_text, int __pyx_v_use_sent_id); /* proto */ +static int __pyx_pf_3_sa_9DataArray___cinit__(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, PyObject *__pyx_v_from_binary, PyObject *__pyx_v_from_text, PyObject *__pyx_v_side, int __pyx_v_use_sent_id); /* proto */ static Py_ssize_t __pyx_pf_3_sa_9DataArray_2__len__(struct __pyx_obj_3_sa_DataArray *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_3_sa_9DataArray_4getSentId(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, PyObject *__pyx_v_i); /* proto */ static PyObject *__pyx_pf_3_sa_9DataArray_6getSent(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, PyObject *__pyx_v_i); /* proto */ @@ -1966,10 +2015,13 @@ static PyObject *__pyx_pf_3_sa_9DataArray_10get_id(struct __pyx_obj_3_sa_DataArr static PyObject *__pyx_pf_3_sa_9DataArray_12get_word(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, PyObject *__pyx_v_id); /* proto */ static PyObject *__pyx_pf_3_sa_9DataArray_14write_text(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, char *__pyx_v_filename); /* proto */ static PyObject *__pyx_pf_3_sa_9DataArray_16read_text(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, char *__pyx_v_filename); /* proto */ -static PyObject *__pyx_pf_3_sa_9DataArray_18read_binary(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, char *__pyx_v_filename); /* proto */ -static PyObject *__pyx_pf_3_sa_9DataArray_20write_binary(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, char *__pyx_v_filename); /* proto */ -static PyObject *__pyx_pf_3_sa_9DataArray_22write_enhanced_handle(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, PyObject *__pyx_v_f); /* proto */ -static PyObject *__pyx_pf_3_sa_9DataArray_24write_enhanced(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, char *__pyx_v_filename); /* proto */ +static PyObject *__pyx_pf_3_sa_9DataArray_11read_bitext_genexpr(PyObject *__pyx_self); /* proto */ +static PyObject *__pyx_pf_3_sa_9DataArray_18read_bitext(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, char *__pyx_v_filename, int __pyx_v_side); /* proto */ +static PyObject *__pyx_pf_3_sa_9DataArray_20read_text_data(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, PyObject *__pyx_v_data); /* proto */ +static PyObject *__pyx_pf_3_sa_9DataArray_22read_binary(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, char *__pyx_v_filename); /* proto */ +static PyObject *__pyx_pf_3_sa_9DataArray_24write_binary(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, char *__pyx_v_filename); /* proto */ +static PyObject *__pyx_pf_3_sa_9DataArray_26write_enhanced_handle(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, PyObject *__pyx_v_f); /* proto */ +static PyObject *__pyx_pf_3_sa_9DataArray_28write_enhanced(struct __pyx_obj_3_sa_DataArray *__pyx_v_self, char *__pyx_v_filename); /* proto */ static PyObject *__pyx_pf_3_sa_9Alignment_unlink(CYTHON_UNUSED struct __pyx_obj_3_sa_Alignment *__pyx_v_self, PyObject *__pyx_v_link); /* proto */ static PyObject *__pyx_pf_3_sa_9Alignment_2get_sent_links(struct __pyx_obj_3_sa_Alignment *__pyx_v_self, int __pyx_v_sent_id); /* proto */ static int __pyx_pf_3_sa_9Alignment_4__cinit__(struct __pyx_obj_3_sa_Alignment *__pyx_v_self, PyObject *__pyx_v_from_binary, PyObject *__pyx_v_from_text); /* proto */ @@ -2061,12 +2113,12 @@ static int __pyx_pf_3_sa_14Precomputation___cinit__(struct __pyx_obj_3_sa_Precom static PyObject *__pyx_pf_3_sa_14Precomputation_2read_binary(struct __pyx_obj_3_sa_Precomputation *__pyx_v_self, char *__pyx_v_filename); /* proto */ static PyObject *__pyx_pf_3_sa_14Precomputation_4write_binary(struct __pyx_obj_3_sa_Precomputation *__pyx_v_self, char *__pyx_v_filename); /* proto */ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_sa_Precomputation *__pyx_v_self, PyObject *__pyx_v_stats, struct __pyx_obj_3_sa_SuffixArray *__pyx_v_sarray); /* proto */ -static int __pyx_pf_3_sa_11SuffixArray___cinit__(struct __pyx_obj_3_sa_SuffixArray *__pyx_v_self, PyObject *__pyx_v_from_binary, PyObject *__pyx_v_from_text); /* proto */ +static int __pyx_pf_3_sa_11SuffixArray___cinit__(struct __pyx_obj_3_sa_SuffixArray *__pyx_v_self, PyObject *__pyx_v_from_binary, PyObject *__pyx_v_from_text, PyObject *__pyx_v_side); /* proto */ static PyObject *__pyx_pf_3_sa_11SuffixArray_2__getitem__(struct __pyx_obj_3_sa_SuffixArray *__pyx_v_self, PyObject *__pyx_v_i); /* proto */ static PyObject *__pyx_pf_3_sa_11SuffixArray_4getSentId(struct __pyx_obj_3_sa_SuffixArray *__pyx_v_self, PyObject *__pyx_v_i); /* proto */ static PyObject *__pyx_pf_3_sa_11SuffixArray_6getSent(struct __pyx_obj_3_sa_SuffixArray *__pyx_v_self, PyObject *__pyx_v_i); /* proto */ static PyObject *__pyx_pf_3_sa_11SuffixArray_8getSentPos(struct __pyx_obj_3_sa_SuffixArray *__pyx_v_self, PyObject *__pyx_v_loc); /* proto */ -static PyObject *__pyx_pf_3_sa_11SuffixArray_10read_text(struct __pyx_obj_3_sa_SuffixArray *__pyx_v_self, char *__pyx_v_filename); /* proto */ +static PyObject *__pyx_pf_3_sa_11SuffixArray_10read_text(struct __pyx_obj_3_sa_SuffixArray *__pyx_v_self, PyObject *__pyx_v_filename, PyObject *__pyx_v_side); /* proto */ static PyObject *__pyx_pf_3_sa_11SuffixArray_12q3sort(struct __pyx_obj_3_sa_SuffixArray *__pyx_v_self, int __pyx_v_i, int __pyx_v_j, int __pyx_v_h, struct __pyx_obj_3_sa_IntList *__pyx_v_isa, PyObject *__pyx_v_pad); /* proto */ static PyObject *__pyx_pf_3_sa_11SuffixArray_14write_text(struct __pyx_obj_3_sa_SuffixArray *__pyx_v_self, char *__pyx_v_filename); /* proto */ static PyObject *__pyx_pf_3_sa_11SuffixArray_16read_binary(struct __pyx_obj_3_sa_SuffixArray *__pyx_v_self, char *__pyx_v_filename); /* proto */ @@ -2121,49 +2173,47 @@ static char __pyx_k_8[] = "Requested index %d:%d of %d-length IntList"; static char __pyx_k_9[] = "Illegal key type %s for IntList"; static char __pyx_k_13[] = "%s "; static char __pyx_k_14[] = "\n"; -static char __pyx_k_18[] = "%d "; -static char __pyx_k_22[] = "%s %d "; -static char __pyx_k_24[] = "write_enhanced_handle"; -static char __pyx_k_28[] = "-"; -static char __pyx_k_32[] = "%d-%d "; -static char __pyx_k_39[] = "%d-%d out of bounds (I=%d,J=%d) in line %d\n"; -static char __pyx_k_42[] = ""; -static char __pyx_k_43[] = "Sort error in CLex"; -static char __pyx_k_45[] = " "; -static char __pyx_k_47[] = "%d %f %f "; -static char __pyx_k_49[] = "%d %s "; -static char __pyx_k_53[] = "%s %s %.6f %.6f\n"; -static char __pyx_k_55[] = " ("; -static char __pyx_k_56[] = ")"; -static char __pyx_k_57[] = "Constructing LCP array"; -static char __pyx_k_59[] = "LCP array completed"; -static char __pyx_k_61[] = "[%s,%d]"; -static char __pyx_k_62[] = "[%s]"; -static char __pyx_k_63[] = "\\"; -static char __pyx_k_64[] = " "; -static char __pyx_k_65[] = "Invalid LHS symbol: %d"; -static char __pyx_k_66[] = "%d-%d"; -static char __pyx_k_67[] = " ||| "; -static char __pyx_k_68[] = "precompute_secondary_rank"; -static char __pyx_k_69[] = "train_max_initial_size"; -static char __pyx_k_70[] = "Precomputing frequent intersections"; -static char __pyx_k_72[] = " Computing inverted indexes..."; -static char __pyx_k_74[] = " Computing collocations..."; -static char __pyx_k_76[] = " %d sentences"; -static char __pyx_k_81[] = "X "; -static char __pyx_k_82[] = "ERROR: unexpected pattern %s in set of precomputed collocations"; -static char __pyx_k_83[] = "RANK %d\tCOUNT, COST: %d %d\tCUMUL: %d, %d"; -static char __pyx_k_84[] = "Precomputed collocations for %d patterns out of %d possible (upper bound %d)"; -static char __pyx_k_85[] = "Precomputed inverted index for %d patterns "; -static char __pyx_k_86[] = "Precomputation took %f seconds"; -static char __pyx_k_87[] = " Bucket sort took %f seconds"; -static char __pyx_k_88[] = " Refining, sort depth = %d"; -static char __pyx_k_89[] = " Refinement took %f seconds"; -static char __pyx_k_90[] = " Finalizing sort..."; -static char __pyx_k_92[] = "Suffix array construction took %f seconds"; -static char __pyx_k_93[] = "Unexpected condition found in q3sort: sort from %d to %d"; -static char __pyx_k_98[] = "Sampling strategy: uniform, max sample size = %d"; -static char __pyx_k_99[] = "Sampling strategy: no sampling"; +static char __pyx_k_18[] = " ||| "; +static char __pyx_k_21[] = "%d "; +static char __pyx_k_25[] = "%s %d "; +static char __pyx_k_27[] = "write_enhanced_handle"; +static char __pyx_k_31[] = "-"; +static char __pyx_k_35[] = "%d-%d "; +static char __pyx_k_42[] = "%d-%d out of bounds (I=%d,J=%d) in line %d\n"; +static char __pyx_k_45[] = ""; +static char __pyx_k_46[] = "Sort error in CLex"; +static char __pyx_k_48[] = " "; +static char __pyx_k_50[] = "%d %f %f "; +static char __pyx_k_52[] = "%d %s "; +static char __pyx_k_56[] = "%s %s %.6f %.6f\n"; +static char __pyx_k_58[] = " ("; +static char __pyx_k_59[] = ")"; +static char __pyx_k_60[] = "Constructing LCP array"; +static char __pyx_k_62[] = "LCP array completed"; +static char __pyx_k_64[] = "[%s,%d]"; +static char __pyx_k_65[] = "[%s]"; +static char __pyx_k_66[] = "\\"; +static char __pyx_k_67[] = " "; +static char __pyx_k_68[] = "Invalid LHS symbol: %d"; +static char __pyx_k_69[] = "%d-%d"; +static char __pyx_k_70[] = "precompute_secondary_rank"; +static char __pyx_k_71[] = "train_max_initial_size"; +static char __pyx_k_72[] = "Precomputing frequent intersections"; +static char __pyx_k_74[] = " Computing inverted indexes..."; +static char __pyx_k_76[] = " Computing collocations..."; +static char __pyx_k_78[] = " %d sentences"; +static char __pyx_k_83[] = "X "; +static char __pyx_k_84[] = "ERROR: unexpected pattern %s in set of precomputed collocations"; +static char __pyx_k_85[] = "RANK %d\tCOUNT, COST: %d %d\tCUMUL: %d, %d"; +static char __pyx_k_86[] = "Precomputed collocations for %d patterns out of %d possible (upper bound %d)"; +static char __pyx_k_87[] = "Precomputed inverted index for %d patterns "; +static char __pyx_k_88[] = "Precomputation took %f seconds"; +static char __pyx_k_89[] = " Bucket sort took %f seconds"; +static char __pyx_k_90[] = " Refining, sort depth = %d"; +static char __pyx_k_91[] = " Refinement took %f seconds"; +static char __pyx_k_92[] = " Finalizing sort..."; +static char __pyx_k_94[] = "Suffix array construction took %f seconds"; +static char __pyx_k_95[] = "Unexpected condition found in q3sort: sort from %d to %d"; static char __pyx_k__0[] = "0"; static char __pyx_k__1[] = "1"; static char __pyx_k__e[] = "e"; @@ -2173,39 +2223,41 @@ static char __pyx_k__i[] = "i"; static char __pyx_k__j[] = "j"; static char __pyx_k__r[] = "r"; static char __pyx_k__w[] = "w"; -static char __pyx_k_101[] = "require_aligned_terminal"; -static char __pyx_k_102[] = "require_aligned_chunks"; -static char __pyx_k_103[] = "[X]"; -static char __pyx_k_104[] = "Must specify an alignment object"; -static char __pyx_k_106[] = "Reading precomputed data from file %s... "; -static char __pyx_k_107[] = "Precomputation done with max nonterminals %d, decoder uses %d"; -static char __pyx_k_108[] = "Precomputation done with max terminals %d, decoder uses %d"; -static char __pyx_k_109[] = "Precomputation done with max initial size %d, decoder uses %d"; -static char __pyx_k_110[] = "Precomputation done with min gap size %d, decoder uses %d"; -static char __pyx_k_111[] = "Converting %d hash keys on precomputed inverted index... "; -static char __pyx_k_112[] = "Converting %d hash keys on precomputed collocations... "; -static char __pyx_k_113[] = "Processing precomputations took %f seconds"; -static char __pyx_k_114[] = "{"; - static char __pyx_k_115[] = "("; -static char __pyx_k_116[] = "}"; -static char __pyx_k_117[] = "get_precomputed_collocation"; -static char __pyx_k_118[] = "double binary"; -static char __pyx_k_119[] = "Keyword trie error"; -static char __pyx_k_121[] = "get_all_nodes_isteps_away"; -static char __pyx_k_122[] = "Total time for rule lookup, extraction, and scoring = %f seconds"; -static char __pyx_k_123[] = " Extract time = %f seconds"; -static char __pyx_k_124[] = "No aligned terminals"; -static char __pyx_k_125[] = "Unaligned chunk"; -static char __pyx_k_126[] = "Gaps are not tight phrases"; -static char __pyx_k_127[] = "Inside edges of preceding subphrase are not tight"; -static char __pyx_k_128[] = "Inside edges of following subphrase are not tight"; -static char __pyx_k_129[] = "Subphrase [%d, %d] failed integrity check"; -static char __pyx_k_130[] = "Didn't extract anything from [%d, %d] -> [%d, %d]"; -static char __pyx_k_131[] = "Unable to extract basic phrase"; -static char __pyx_k_134[] = "/Users/vchahun/Sandbox/cdec/python/src/sa/_sa.pyx"; -static char __pyx_k_135[] = "cdec.sa"; -static char __pyx_k_139[] = "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi"; -static char __pyx_k_140[] = "*EPS*"; +static char __pyx_k_100[] = "Sampling strategy: uniform, max sample size = %d"; +static char __pyx_k_101[] = "Sampling strategy: no sampling"; +static char __pyx_k_103[] = "require_aligned_terminal"; +static char __pyx_k_104[] = "require_aligned_chunks"; +static char __pyx_k_105[] = "[X]"; +static char __pyx_k_106[] = "Must specify an alignment object"; +static char __pyx_k_108[] = "Reading precomputed data from file %s... "; +static char __pyx_k_109[] = "Precomputation done with max nonterminals %d, decoder uses %d"; +static char __pyx_k_110[] = "Precomputation done with max terminals %d, decoder uses %d"; +static char __pyx_k_111[] = "Precomputation done with max initial size %d, decoder uses %d"; +static char __pyx_k_112[] = "Precomputation done with min gap size %d, decoder uses %d"; +static char __pyx_k_113[] = "Converting %d hash keys on precomputed inverted index... "; +static char __pyx_k_114[] = "Converting %d hash keys on precomputed collocations... "; +static char __pyx_k_115[] = "Processing precomputations took %f seconds"; +static char __pyx_k_116[] = "{"; + static char __pyx_k_117[] = "("; +static char __pyx_k_118[] = "}"; +static char __pyx_k_119[] = "get_precomputed_collocation"; +static char __pyx_k_120[] = "double binary"; +static char __pyx_k_121[] = "Keyword trie error"; +static char __pyx_k_123[] = "get_all_nodes_isteps_away"; +static char __pyx_k_124[] = "Total time for rule lookup, extraction, and scoring = %f seconds"; +static char __pyx_k_125[] = " Extract time = %f seconds"; +static char __pyx_k_126[] = "No aligned terminals"; +static char __pyx_k_127[] = "Unaligned chunk"; +static char __pyx_k_128[] = "Gaps are not tight phrases"; +static char __pyx_k_129[] = "Inside edges of preceding subphrase are not tight"; +static char __pyx_k_130[] = "Inside edges of following subphrase are not tight"; +static char __pyx_k_131[] = "Subphrase [%d, %d] failed integrity check"; +static char __pyx_k_132[] = "Didn't extract anything from [%d, %d] -> [%d, %d]"; +static char __pyx_k_133[] = "Unable to extract basic phrase"; +static char __pyx_k_136[] = "/Users/vchahun/Sandbox/cdec/python/src/sa/_sa.pyx"; +static char __pyx_k_137[] = "cdec.sa"; +static char __pyx_k_141[] = "/Users/vchahun/Sandbox/cdec/python/src/sa/sym.pxi"; +static char __pyx_k_142[] = "*EPS*"; static char __pyx_k__gc[] = "gc"; static char __pyx_k__sa[] = "sa"; static char __pyx_k___sa[] = "_sa"; @@ -2229,6 +2281,7 @@ static char __pyx_k__info[] = "info"; static char __pyx_k__join[] = "join"; static char __pyx_k__open[] = "open"; static char __pyx_k__seek[] = "seek"; +static char __pyx_k__side[] = "side"; static char __pyx_k__size[] = "size"; static char __pyx_k__skip[] = "skip"; static char __pyx_k__stop[] = "stop"; @@ -2266,6 +2319,7 @@ static char __pyx_k__sample[] = "sample"; static char __pyx_k__sarray[] = "sarray"; static char __pyx_k__scores[] = "scores"; static char __pyx_k__sorted[] = "sorted"; +static char __pyx_k__source[] = "source"; static char __pyx_k__string[] = "string"; static char __pyx_k__unlink[] = "unlink"; static char __pyx_k__advance[] = "advance"; @@ -2334,6 +2388,7 @@ static char __pyx_k__initial_len[] = "initial_len"; static char __pyx_k__next_states[] = "next_states"; static char __pyx_k__precomputed[] = "precomputed"; static char __pyx_k__read_binary[] = "read_binary"; +static char __pyx_k__read_bitext[] = "read_bitext"; static char __pyx_k__sample_size[] = "sample_size"; static char __pyx_k__suffix_link[] = "suffix_link"; static char __pyx_k__use_sent_id[] = "use_sent_id"; @@ -2344,6 +2399,7 @@ static char __pyx_k__StopIteration[] = "StopIteration"; static char __pyx_k__alphabet_size[] = "alphabet_size"; static char __pyx_k__tight_phrases[] = "tight_phrases"; static char __pyx_k__pattern2phrase[] = "pattern2phrase"; +static char __pyx_k__read_text_data[] = "read_text_data"; static char __pyx_k__sym_fromstring[] = "sym_fromstring"; static char __pyx_k__by_slack_factor[] = "by_slack_factor"; static char __pyx_k__get_next_states[] = "get_next_states"; @@ -2362,11 +2418,11 @@ static char __pyx_k__max_target_length[] = "max_target_length"; static char __pyx_k__train_min_gap_size[] = "train_min_gap_size"; static char __pyx_k__pattern2phrase_plus[] = "pattern2phrase_plus"; static PyObject *__pyx_kp_s_1; -static PyObject *__pyx_n_s_101; -static PyObject *__pyx_n_s_102; -static PyObject *__pyx_kp_s_104; +static PyObject *__pyx_kp_s_100; +static PyObject *__pyx_kp_s_101; +static PyObject *__pyx_n_s_103; +static PyObject *__pyx_n_s_104; static PyObject *__pyx_kp_s_106; -static PyObject *__pyx_kp_s_107; static PyObject *__pyx_kp_s_108; static PyObject *__pyx_kp_s_109; static PyObject *__pyx_kp_s_110; @@ -2376,12 +2432,12 @@ static PyObject *__pyx_kp_s_113; static PyObject *__pyx_kp_s_114; static PyObject *__pyx_kp_s_115; static PyObject *__pyx_kp_s_116; -static PyObject *__pyx_n_s_117; +static PyObject *__pyx_kp_s_117; static PyObject *__pyx_kp_s_118; -static PyObject *__pyx_kp_s_119; -static PyObject *__pyx_n_s_121; -static PyObject *__pyx_kp_s_122; -static PyObject *__pyx_kp_s_123; +static PyObject *__pyx_n_s_119; +static PyObject *__pyx_kp_s_120; +static PyObject *__pyx_kp_s_121; +static PyObject *__pyx_n_s_123; static PyObject *__pyx_kp_s_124; static PyObject *__pyx_kp_s_125; static PyObject *__pyx_kp_s_126; @@ -2391,49 +2447,49 @@ static PyObject *__pyx_kp_s_129; static PyObject *__pyx_kp_s_13; static PyObject *__pyx_kp_s_130; static PyObject *__pyx_kp_s_131; -static PyObject *__pyx_kp_s_134; -static PyObject *__pyx_kp_s_135; -static PyObject *__pyx_kp_s_139; +static PyObject *__pyx_kp_s_132; +static PyObject *__pyx_kp_s_133; +static PyObject *__pyx_kp_s_136; +static PyObject *__pyx_kp_s_137; static PyObject *__pyx_kp_s_14; -static PyObject *__pyx_kp_s_140; +static PyObject *__pyx_kp_s_141; +static PyObject *__pyx_kp_s_142; static PyObject *__pyx_kp_s_18; static PyObject *__pyx_kp_s_2; -static PyObject *__pyx_kp_s_22; -static PyObject *__pyx_n_s_24; -static PyObject *__pyx_kp_s_28; +static PyObject *__pyx_kp_s_21; +static PyObject *__pyx_kp_s_25; +static PyObject *__pyx_n_s_27; static PyObject *__pyx_kp_s_3; -static PyObject *__pyx_kp_s_32; -static PyObject *__pyx_kp_s_39; +static PyObject *__pyx_kp_s_31; +static PyObject *__pyx_kp_s_35; static PyObject *__pyx_kp_s_4; static PyObject *__pyx_kp_s_42; -static PyObject *__pyx_kp_s_43; static PyObject *__pyx_kp_s_45; -static PyObject *__pyx_kp_s_47; -static PyObject *__pyx_kp_s_49; +static PyObject *__pyx_kp_s_46; +static PyObject *__pyx_kp_s_48; static PyObject *__pyx_kp_s_5; -static PyObject *__pyx_kp_s_53; -static PyObject *__pyx_kp_s_55; +static PyObject *__pyx_kp_s_50; +static PyObject *__pyx_kp_s_52; static PyObject *__pyx_kp_s_56; -static PyObject *__pyx_kp_s_57; +static PyObject *__pyx_kp_s_58; static PyObject *__pyx_kp_s_59; static PyObject *__pyx_kp_s_6; -static PyObject *__pyx_kp_s_61; +static PyObject *__pyx_kp_s_60; static PyObject *__pyx_kp_s_62; -static PyObject *__pyx_kp_s_63; static PyObject *__pyx_kp_s_64; static PyObject *__pyx_kp_s_65; static PyObject *__pyx_kp_s_66; static PyObject *__pyx_kp_s_67; -static PyObject *__pyx_n_s_68; -static PyObject *__pyx_n_s_69; +static PyObject *__pyx_kp_s_68; +static PyObject *__pyx_kp_s_69; static PyObject *__pyx_kp_s_7; -static PyObject *__pyx_kp_s_70; +static PyObject *__pyx_n_s_70; +static PyObject *__pyx_n_s_71; static PyObject *__pyx_kp_s_72; static PyObject *__pyx_kp_s_74; static PyObject *__pyx_kp_s_76; +static PyObject *__pyx_kp_s_78; static PyObject *__pyx_kp_s_8; -static PyObject *__pyx_kp_s_81; -static PyObject *__pyx_kp_s_82; static PyObject *__pyx_kp_s_83; static PyObject *__pyx_kp_s_84; static PyObject *__pyx_kp_s_85; @@ -2443,10 +2499,10 @@ static PyObject *__pyx_kp_s_88; static PyObject *__pyx_kp_s_89; static PyObject *__pyx_kp_s_9; static PyObject *__pyx_kp_s_90; +static PyObject *__pyx_kp_s_91; static PyObject *__pyx_kp_s_92; -static PyObject *__pyx_kp_s_93; -static PyObject *__pyx_kp_s_98; -static PyObject *__pyx_kp_s_99; +static PyObject *__pyx_kp_s_94; +static PyObject *__pyx_kp_s_95; static PyObject *__pyx_kp_s__0; static PyObject *__pyx_kp_s__1; static PyObject *__pyx_n_s__END_OF_FILE; @@ -2564,7 +2620,9 @@ static PyObject *__pyx_n_s__range; static PyObject *__pyx_n_s__reachable; static PyObject *__pyx_n_s__reachable_buffer; static PyObject *__pyx_n_s__read_binary; +static PyObject *__pyx_n_s__read_bitext; static PyObject *__pyx_n_s__read_text; +static PyObject *__pyx_n_s__read_text_data; static PyObject *__pyx_n_s__res; static PyObject *__pyx_n_s__reset; static PyObject *__pyx_n_s__resource; @@ -2581,9 +2639,11 @@ static PyObject *__pyx_n_s__scores; static PyObject *__pyx_n_s__seek; static PyObject *__pyx_n_s__setdefault; static PyObject *__pyx_n_s__shortest; +static PyObject *__pyx_n_s__side; static PyObject *__pyx_n_s__size; static PyObject *__pyx_n_s__skip; static PyObject *__pyx_n_s__sorted; +static PyObject *__pyx_n_s__source; static PyObject *__pyx_n_s__spanlen; static PyObject *__pyx_n_s__split; static PyObject *__pyx_n_s__start; @@ -2618,8 +2678,8 @@ static PyObject *__pyx_int_10; static PyObject *__pyx_int_20; static PyObject *__pyx_int_1000; static PyObject *__pyx_int_65536; -static PyObject *__pyx_k_38; -static PyObject *__pyx_k_97; +static PyObject *__pyx_k_41; +static PyObject *__pyx_k_99; static PyObject *__pyx_k_tuple_10; static PyObject *__pyx_k_tuple_11; static PyObject *__pyx_k_tuple_12; @@ -2628,49 +2688,51 @@ static PyObject *__pyx_k_tuple_16; static PyObject *__pyx_k_tuple_17; static PyObject *__pyx_k_tuple_19; static PyObject *__pyx_k_tuple_20; -static PyObject *__pyx_k_tuple_21; +static PyObject *__pyx_k_tuple_22; static PyObject *__pyx_k_tuple_23; -static PyObject *__pyx_k_tuple_25; +static PyObject *__pyx_k_tuple_24; static PyObject *__pyx_k_tuple_26; -static PyObject *__pyx_k_tuple_27; +static PyObject *__pyx_k_tuple_28; static PyObject *__pyx_k_tuple_29; static PyObject *__pyx_k_tuple_30; -static PyObject *__pyx_k_tuple_31; +static PyObject *__pyx_k_tuple_32; static PyObject *__pyx_k_tuple_33; static PyObject *__pyx_k_tuple_34; -static PyObject *__pyx_k_tuple_35; static PyObject *__pyx_k_tuple_36; static PyObject *__pyx_k_tuple_37; +static PyObject *__pyx_k_tuple_38; +static PyObject *__pyx_k_tuple_39; static PyObject *__pyx_k_tuple_40; -static PyObject *__pyx_k_tuple_41; +static PyObject *__pyx_k_tuple_43; static PyObject *__pyx_k_tuple_44; -static PyObject *__pyx_k_tuple_46; -static PyObject *__pyx_k_tuple_48; -static PyObject *__pyx_k_tuple_50; +static PyObject *__pyx_k_tuple_47; +static PyObject *__pyx_k_tuple_49; static PyObject *__pyx_k_tuple_51; -static PyObject *__pyx_k_tuple_52; +static PyObject *__pyx_k_tuple_53; static PyObject *__pyx_k_tuple_54; -static PyObject *__pyx_k_tuple_58; -static PyObject *__pyx_k_tuple_60; -static PyObject *__pyx_k_tuple_71; +static PyObject *__pyx_k_tuple_55; +static PyObject *__pyx_k_tuple_57; +static PyObject *__pyx_k_tuple_61; +static 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*__pyx_k_tuple_134; +static PyObject *__pyx_k_tuple_138; +static PyObject *__pyx_k_tuple_139; +static PyObject *__pyx_k_codeobj_135; +static PyObject *__pyx_k_codeobj_140; /* "_sa.pyx":5 * import gzip @@ -6290,27 +6352,30 @@ static int __pyx_pw_3_sa_9DataArray_1__cinit__(PyObject *__pyx_v_self, PyObject static int __pyx_pw_3_sa_9DataArray_1__cinit__(PyObject *__pyx_v_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { PyObject *__pyx_v_from_binary = 0; PyObject *__pyx_v_from_text = 0; + PyObject *__pyx_v_side = 0; int __pyx_v_use_sent_id; int __pyx_r; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("__cinit__ (wrapper)", 0); { - static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__from_binary,&__pyx_n_s__from_text,&__pyx_n_s__use_sent_id,0}; - PyObject* values[3] = {0,0,0}; + static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__from_binary,&__pyx_n_s__from_text,&__pyx_n_s__side,&__pyx_n_s__use_sent_id,0}; + PyObject* values[4] = {0,0,0,0}; /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":17 * cdef bint use_sent_id * - * def __cinit__(self, from_binary=None, from_text=None, bint use_sent_id=False): # <<<<<<<<<<<<<< + * def __cinit__(self, from_binary=None, from_text=None, side=None, bint use_sent_id=False): # <<<<<<<<<<<<<< * self.word2id = {"END_OF_FILE":0, "END_OF_LINE":1} * self.id2word = ["END_OF_FILE", "END_OF_LINE"] */ values[0] = ((PyObject *)Py_None); values[1] = ((PyObject *)Py_None); + values[2] = ((PyObject *)Py_None); if (unlikely(__pyx_kwds)) { Py_ssize_t kw_args; const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); switch (pos_args) { + case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3); case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2); case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0); @@ -6331,15 +6396,21 @@ static int __pyx_pw_3_sa_9DataArray_1__cinit__(PyObject *__pyx_v_self, PyObject } case 2: if (kw_args > 0) { - PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s__use_sent_id); + PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s__side); if (value) { values[2] = value; kw_args--; } } + case 3: + if (kw_args > 0) { + PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s__use_sent_id); + if (value) { values[3] = value; kw_args--; } + } } if (unlikely(kw_args > 0)) { if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "__cinit__") < 0)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } else { switch (PyTuple_GET_SIZE(__pyx_args)) { + case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3); case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2); case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0); @@ -6349,32 +6420,34 @@ static int __pyx_pw_3_sa_9DataArray_1__cinit__(PyObject *__pyx_v_self, PyObject } __pyx_v_from_binary = values[0]; __pyx_v_from_text = values[1]; - if 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NULL; int __pyx_t_2; PyObject *__pyx_t_3 = NULL; PyObject *__pyx_t_4 = NULL; + long __pyx_t_5; int __pyx_lineno = 0; const char *__pyx_filename = NULL; int __pyx_clineno = 0; @@ -6382,7 +6455,7 @@ static int __pyx_pf_3_sa_9DataArray___cinit__(struct __pyx_obj_3_sa_DataArray *_ /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":18 * - * def __cinit__(self, from_binary=None, from_text=None, bint use_sent_id=False): + * def __cinit__(self, from_binary=None, from_text=None, side=None, bint use_sent_id=False): * self.word2id = {"END_OF_FILE":0, "END_OF_LINE":1} # <<<<<<<<<<<<<< * self.id2word = ["END_OF_FILE", "END_OF_LINE"] * self.data = IntList(1000,1000) @@ -6398,7 +6471,7 @@ static int __pyx_pf_3_sa_9DataArray___cinit__(struct __pyx_obj_3_sa_DataArray *_ __pyx_t_1 = 0; /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":19 - * def __cinit__(self, from_binary=None, from_text=None, bint use_sent_id=False): + * def __cinit__(self, from_binary=None, from_text=None, 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free(c_word) * self.word2id[py_word] = len(self.id2word) # <<<<<<<<<<<<<< @@ -8009,26 +8610,26 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray */ __pyx_t_3 = __pyx_v_self->id2word; __Pyx_INCREF(__pyx_t_3); - __pyx_t_4 = PyObject_Length(__pyx_t_3); if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 102; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_Length(__pyx_t_3); if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 114; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - __pyx_t_3 = PyInt_FromSsize_t(__pyx_t_4); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 102; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyInt_FromSsize_t(__pyx_t_4); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 114; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - if 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((PyObject *)__pyx_v_py_word)); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 115; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; } - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":104 + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":116 * self.word2id[py_word] = len(self.id2word) * self.id2word.append(py_word) * if len(self.sent_id) == 0: # <<<<<<<<<<<<<< @@ -8037,12 +8638,12 @@ static void __pyx_f_3_sa_9DataArray_read_handle(struct __pyx_obj_3_sa_DataArray */ __pyx_t_3 = ((PyObject *)__pyx_v_self->sent_id); __Pyx_INCREF(__pyx_t_3); - __pyx_t_4 = PyObject_Length(__pyx_t_3); if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 104; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_Length(__pyx_t_3); if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 116; __pyx_clineno = __LINE__; goto 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FILE* f): # <<<<<<<<<<<<<< @@ -8098,7 +8699,7 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray int __pyx_clineno = 0; __Pyx_RefNannySetupContext("write_handle", 0); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":113 + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":125 * cdef int num_words * cdef char* c_word * self.data.write_handle(f) # <<<<<<<<<<<<<< @@ -8107,7 +8708,7 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->data->__pyx_vtab)->write_handle(__pyx_v_self->data, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":114 + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":126 * cdef char* c_word * self.data.write_handle(f) * self.sent_index.write_handle(f) # <<<<<<<<<<<<<< @@ -8116,7 +8717,7 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->sent_index->__pyx_vtab)->write_handle(__pyx_v_self->sent_index, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":115 + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":127 * self.data.write_handle(f) * self.sent_index.write_handle(f) * self.sent_id.write_handle(f) # <<<<<<<<<<<<<< @@ -8125,7 +8726,7 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray */ ((struct __pyx_vtabstruct_3_sa_IntList *)__pyx_v_self->sent_id->__pyx_vtab)->write_handle(__pyx_v_self->sent_id, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":116 + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":128 * self.sent_index.write_handle(f) * self.sent_id.write_handle(f) * num_words = len(self.id2word) - 2 # <<<<<<<<<<<<<< @@ -8134,11 +8735,11 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray */ __pyx_t_1 = __pyx_v_self->id2word; __Pyx_INCREF(__pyx_t_1); - __pyx_t_2 = PyObject_Length(__pyx_t_1); if (unlikely(__pyx_t_2 == -1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 116; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Length(__pyx_t_1); if (unlikely(__pyx_t_2 == -1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 128; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __pyx_v_num_words = (__pyx_t_2 - 2); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":117 + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":129 * self.sent_id.write_handle(f) * num_words = len(self.id2word) - 2 * fwrite(&(num_words), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -8147,20 +8748,20 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray */ fwrite((&__pyx_v_num_words), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":118 + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":130 * num_words = len(self.id2word) - 2 * fwrite(&(num_words), sizeof(int), 1, f) * for word in self.id2word[2:]: # <<<<<<<<<<<<<< * c_word = word * word_len = strlen(c_word) + 1 */ - __pyx_t_1 = __Pyx_PySequence_GetSlice(__pyx_v_self->id2word, 2, PY_SSIZE_T_MAX); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 118; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PySequence_GetSlice(__pyx_v_self->id2word, 2, PY_SSIZE_T_MAX); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 130; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); if (PyList_CheckExact(__pyx_t_1) || PyTuple_CheckExact(__pyx_t_1)) { __pyx_t_3 = __pyx_t_1; __Pyx_INCREF(__pyx_t_3); __pyx_t_2 = 0; __pyx_t_4 = NULL; } else { - __pyx_t_2 = -1; __pyx_t_3 = PyObject_GetIter(__pyx_t_1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 118; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = -1; __pyx_t_3 = PyObject_GetIter(__pyx_t_1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 130; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __pyx_t_4 = Py_TYPE(__pyx_t_3)->tp_iternext; } @@ -8171,21 +8772,21 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray #if CYTHON_COMPILING_IN_CPYTHON __pyx_t_1 = PyList_GET_ITEM(__pyx_t_3, __pyx_t_2); __Pyx_INCREF(__pyx_t_1); __pyx_t_2++; #else - __pyx_t_1 = PySequence_ITEM(__pyx_t_3, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 118; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; + __pyx_t_1 = PySequence_ITEM(__pyx_t_3, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 130; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; #endif } else if (!__pyx_t_4 && PyTuple_CheckExact(__pyx_t_3)) { if (__pyx_t_2 >= PyTuple_GET_SIZE(__pyx_t_3)) break; #if CYTHON_COMPILING_IN_CPYTHON __pyx_t_1 = PyTuple_GET_ITEM(__pyx_t_3, __pyx_t_2); __Pyx_INCREF(__pyx_t_1); __pyx_t_2++; #else - __pyx_t_1 = PySequence_ITEM(__pyx_t_3, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 118; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; + __pyx_t_1 = PySequence_ITEM(__pyx_t_3, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 130; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; #endif } else { __pyx_t_1 = __pyx_t_4(__pyx_t_3); if (unlikely(!__pyx_t_1)) { if (PyErr_Occurred()) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[3]; __pyx_lineno = 118; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else {__pyx_filename = __pyx_f[3]; __pyx_lineno = 130; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } break; } @@ -8195,17 +8796,17 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray __pyx_v_word = __pyx_t_1; __pyx_t_1 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":119 + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":131 * fwrite(&(num_words), sizeof(int), 1, f) * for word in self.id2word[2:]: * c_word = word # <<<<<<<<<<<<<< * word_len = strlen(c_word) + 1 * fwrite(&(word_len), sizeof(int), 1, f) */ - __pyx_t_5 = PyBytes_AsString(__pyx_v_word); if (unlikely((!__pyx_t_5) && PyErr_Occurred())) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 119; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyBytes_AsString(__pyx_v_word); if (unlikely((!__pyx_t_5) && PyErr_Occurred())) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 131; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_v_c_word = __pyx_t_5; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":120 + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":132 * for word in self.id2word[2:]: * c_word = word * word_len = strlen(c_word) + 1 # <<<<<<<<<<<<<< @@ -8214,7 +8815,7 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray */ __pyx_v_word_len = (strlen(__pyx_v_c_word) + 1); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":121 + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":133 * c_word = word * word_len = strlen(c_word) + 1 * fwrite(&(word_len), sizeof(int), 1, f) # <<<<<<<<<<<<<< @@ -8223,7 +8824,7 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray */ fwrite((&__pyx_v_word_len), (sizeof(int)), 1, __pyx_v_f); - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":122 + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":134 * word_len = strlen(c_word) + 1 * fwrite(&(word_len), sizeof(int), 1, f) * fwrite(c_word, sizeof(char), word_len, f) # <<<<<<<<<<<<<< @@ -8245,14 +8846,14 @@ static void __pyx_f_3_sa_9DataArray_write_handle(struct __pyx_obj_3_sa_DataArray } /* Python wrapper */ -static PyObject *__pyx_pw_3_sa_9DataArray_21write_binary(PyObject *__pyx_v_self, PyObject *__pyx_arg_filename); /*proto*/ -static PyObject *__pyx_pw_3_sa_9DataArray_21write_binary(PyObject *__pyx_v_self, PyObject *__pyx_arg_filename) { +static PyObject *__pyx_pw_3_sa_9DataArray_25write_binary(PyObject *__pyx_v_self, PyObject *__pyx_arg_filename); /*proto*/ +static PyObject *__pyx_pw_3_sa_9DataArray_25write_binary(PyObject *__pyx_v_self, PyObject *__pyx_arg_filename) { char *__pyx_v_filename; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("write_binary (wrapper)", 0); assert(__pyx_arg_filename); { - __pyx_v_filename = PyBytes_AsString(__pyx_arg_filename); if (unlikely((!__pyx_v_filename) && PyErr_Occurred())) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 124; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_filename = PyBytes_AsString(__pyx_arg_filename); if (unlikely((!__pyx_v_filename) && 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__pyx_L1_error;} + __pyx_t_5 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_21), __pyx_v_i); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 144; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_5)); - __pyx_t_6 = PyTuple_New(1); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 132; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyTuple_New(1); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 144; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); PyTuple_SET_ITEM(__pyx_t_6, 0, ((PyObject *)__pyx_t_5)); __Pyx_GIVEREF(((PyObject *)__pyx_t_5)); __pyx_t_5 = 0; - __pyx_t_5 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_t_6), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 132; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_t_6), NULL); if (unlikely(!__pyx_t_5)) 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__Pyx_GOTREF(__pyx_t_1); - __pyx_t_5 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_k_tuple_19), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 133; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_Call(__pyx_t_1, ((PyObject *)__pyx_k_tuple_22), NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 145; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":134 + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":146 * f.write("%d " %i) * f.write("\n") * for i in self.sent_index: # <<<<<<<<<<<<<< @@ -8441,7 +9042,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_22write_enhanced_handle(struct __pyx_o __pyx_t_5 = ((PyObject *)__pyx_v_self->sent_index); __Pyx_INCREF(__pyx_t_5); __pyx_t_2 = 0; __pyx_t_3 = NULL; } else { - __pyx_t_2 = -1; __pyx_t_5 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PySequence_ITEM(__pyx_t_6, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 149; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; #endif } else if (!__pyx_t_3 && PyTuple_CheckExact(__pyx_t_6)) { if (__pyx_t_2 >= PyTuple_GET_SIZE(__pyx_t_6)) break; #if CYTHON_COMPILING_IN_CPYTHON __pyx_t_5 = PyTuple_GET_ITEM(__pyx_t_6, __pyx_t_2); __Pyx_INCREF(__pyx_t_5); __pyx_t_2++; #else - __pyx_t_5 = PySequence_ITEM(__pyx_t_6, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 137; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; + __pyx_t_5 = PySequence_ITEM(__pyx_t_6, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 149; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; #endif } else { __pyx_t_5 = __pyx_t_3(__pyx_t_6); if (unlikely(!__pyx_t_5)) { if (PyErr_Occurred()) { if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[3]; __pyx_lineno = 137; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + else {__pyx_filename = __pyx_f[3]; __pyx_lineno = 149; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } break; } @@ -8558,23 +9159,23 @@ static PyObject *__pyx_pf_3_sa_9DataArray_22write_enhanced_handle(struct __pyx_o __pyx_v_i = __pyx_t_5; __pyx_t_5 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":138 + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":150 * f.write("\n") * for i in self.sent_id: * f.write("%d " %i) # <<<<<<<<<<<<<< * f.write("\n") * for word in self.id2word: */ - __pyx_t_5 = PyObject_GetAttr(__pyx_v_f, __pyx_n_s__write); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 138; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyObject_GetAttr(__pyx_v_f, __pyx_n_s__write); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 150; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __pyx_t_4 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_18), __pyx_v_i); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 138; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_21), __pyx_v_i); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 150; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_4)); - __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 138; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 150; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); PyTuple_SET_ITEM(__pyx_t_1, 0, ((PyObject *)__pyx_t_4)); __Pyx_GIVEREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0; - __pyx_t_4 = PyObject_Call(__pyx_t_5, ((PyObject *)__pyx_t_1), NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 138; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_Call(__pyx_t_5, ((PyObject *)__pyx_t_1), NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 150; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; @@ -8582,21 +9183,21 @@ static PyObject *__pyx_pf_3_sa_9DataArray_22write_enhanced_handle(struct __pyx_o } __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":139 + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":151 * for i in self.sent_id: * f.write("%d " %i) * f.write("\n") # <<<<<<<<<<<<<< * for word in self.id2word: * f.write("%s %d " % (word, self.word2id[word])) */ - __pyx_t_6 = PyObject_GetAttr(__pyx_v_f, __pyx_n_s__write); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 139; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = PyObject_GetAttr(__pyx_v_f, __pyx_n_s__write); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 151; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_4 = PyObject_Call(__pyx_t_6, ((PyObject *)__pyx_k_tuple_21), NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 139; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyObject_Call(__pyx_t_6, ((PyObject *)__pyx_k_tuple_24), NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 151; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":140 + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":152 * f.write("%d " %i) * f.write("\n") * for word in self.id2word: # 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(unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 140; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; + __pyx_t_6 = PySequence_ITEM(__pyx_t_4, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 152; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; #endif } else if (!__pyx_t_3 && PyTuple_CheckExact(__pyx_t_4)) { if (__pyx_t_2 >= PyTuple_GET_SIZE(__pyx_t_4)) break; #if CYTHON_COMPILING_IN_CPYTHON __pyx_t_6 = PyTuple_GET_ITEM(__pyx_t_4, __pyx_t_2); __Pyx_INCREF(__pyx_t_6); __pyx_t_2++; #else - __pyx_t_6 = PySequence_ITEM(__pyx_t_4, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 140; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; + __pyx_t_6 = PySequence_ITEM(__pyx_t_4, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 152; __pyx_clineno = __LINE__; goto __pyx_L1_error;}; #endif } else { __pyx_t_6 = __pyx_t_3(__pyx_t_4); if 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if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 153; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_1 = PyObject_GetItem(__pyx_v_self->word2id, __pyx_v_word); if (!__pyx_t_1) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 141; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_GetItem(__pyx_v_self->word2id, __pyx_v_word); if (!__pyx_t_1) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 153; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_5 = PyTuple_New(2); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 141; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyTuple_New(2); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 153; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); __Pyx_INCREF(__pyx_v_word); PyTuple_SET_ITEM(__pyx_t_5, 0, __pyx_v_word); @@ -8660,15 +9261,15 @@ static PyObject 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PyTuple_SET_ITEM(__pyx_t_5, 0, ((PyObject *)__pyx_t_1)); __Pyx_GIVEREF(((PyObject *)__pyx_t_1)); __pyx_t_1 = 0; - __pyx_t_1 = PyObject_Call(__pyx_t_6, ((PyObject *)__pyx_t_5), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 141; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyObject_Call(__pyx_t_6, ((PyObject *)__pyx_t_5), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 153; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_5)); __pyx_t_5 = 0; @@ -8676,16 +9277,16 @@ static PyObject *__pyx_pf_3_sa_9DataArray_22write_enhanced_handle(struct __pyx_o } __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; - /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":142 + /* "/Users/vchahun/Sandbox/cdec/python/src/sa/data_array.pxi":154 * for word in self.id2word: * f.write("%s %d " % (word, self.word2id[word])) * f.write("\n") # 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{__pyx_filename = __pyx_f[3]; __pyx_lineno = 145; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyBytes_FromString(__pyx_v_filename); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 157; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_1)); - __pyx_t_2 = PyTuple_New(2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 145; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyTuple_New(2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 157; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_t_1)); __Pyx_GIVEREF(((PyObject *)__pyx_t_1)); @@ -8773,14 +9374,14 @@ static PyObject *__pyx_pf_3_sa_9DataArray_24write_enhanced(struct __pyx_obj_3_sa PyTuple_SET_ITEM(__pyx_t_2, 1, ((PyObject *)__pyx_n_s__w)); __Pyx_GIVEREF(((PyObject *)__pyx_n_s__w)); __pyx_t_1 = 0; - __pyx_t_1 = 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__pyx_lineno = 145; __pyx_clineno = __LINE__; goto __pyx_L9_except_error;} + __pyx_t_8 = PyTuple_New(3); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 157; __pyx_clineno = __LINE__; goto __pyx_L9_except_error;} __Pyx_GOTREF(__pyx_t_8); __Pyx_INCREF(__pyx_t_2); PyTuple_SET_ITEM(__pyx_t_8, 0, __pyx_t_2); @@ -8850,11 +9451,11 @@ static PyObject *__pyx_pf_3_sa_9DataArray_24write_enhanced(struct __pyx_obj_3_sa __Pyx_GIVEREF(__pyx_t_4); __pyx_t_10 = PyObject_Call(__pyx_t_3, __pyx_t_8, NULL); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 145; __pyx_clineno = __LINE__; goto __pyx_L9_except_error;} + if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 157; __pyx_clineno = __LINE__; goto __pyx_L9_except_error;} __Pyx_GOTREF(__pyx_t_10); __pyx_t_9 = __Pyx_PyObject_IsTrue(__pyx_t_10); __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; - if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 145; __pyx_clineno = __LINE__; goto __pyx_L9_except_error;} + if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 157; __pyx_clineno = __LINE__; goto __pyx_L9_except_error;} __pyx_t_11 = (!__pyx_t_9); if (__pyx_t_11) { __Pyx_GIVEREF(__pyx_t_2); @@ -8862,7 +9463,7 @@ static PyObject *__pyx_pf_3_sa_9DataArray_24write_enhanced(struct __pyx_obj_3_sa __Pyx_GIVEREF(__pyx_t_4); __Pyx_ErrRestore(__pyx_t_2, __pyx_t_1, __pyx_t_4); __pyx_t_2 = 0; __pyx_t_1 = 0; __pyx_t_4 = 0; - {__pyx_filename = __pyx_f[3]; __pyx_lineno = 145; __pyx_clineno = __LINE__; goto __pyx_L9_except_error;} + {__pyx_filename = __pyx_f[3]; __pyx_lineno = 157; __pyx_clineno = __LINE__; goto __pyx_L9_except_error;} goto __pyx_L18; } __pyx_L18:; @@ -8888,13 +9489,13 @@ static PyObject *__pyx_pf_3_sa_9DataArray_24write_enhanced(struct __pyx_obj_3_sa } /*finally:*/ { if (__pyx_t_3) { - __pyx_t_7 = PyObject_Call(__pyx_t_3, __pyx_k_tuple_25, NULL); + __pyx_t_7 = PyObject_Call(__pyx_t_3, 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(unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 75; __pyx_clineno = __LINE__; goto __pyx_L7_error;} + __pyx_t_2 = PyObject_Call(__pyx_t_10, ((PyObject *)__pyx_k_tuple_34), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 75; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; @@ -10213,7 +10814,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_10write_text(struct __pyx_obj_3_sa_Ali __Pyx_GOTREF(__pyx_t_13); __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; __Pyx_DECREF(((PyObject *)__pyx_t_12)); __pyx_t_12 = 0; - __pyx_t_12 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_32), __pyx_t_13); if (unlikely(!__pyx_t_12)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 77; __pyx_clineno = __LINE__; goto __pyx_L7_error;} + __pyx_t_12 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_35), __pyx_t_13); if (unlikely(!__pyx_t_12)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 77; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_12)); __Pyx_DECREF(__pyx_t_13); __pyx_t_13 = 0; __pyx_t_13 = PyTuple_New(1); if (unlikely(!__pyx_t_13)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 77; __pyx_clineno = __LINE__; goto __pyx_L7_error;} @@ -10239,7 +10840,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_10write_text(struct __pyx_obj_3_sa_Ali */ __pyx_t_4 = PyObject_GetAttr(__pyx_v_f, __pyx_n_s__write); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 78; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_1 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_k_tuple_33), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 78; __pyx_clineno = __LINE__; goto __pyx_L7_error;} + __pyx_t_1 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_k_tuple_36), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 78; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; @@ -10320,7 +10921,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_10write_text(struct __pyx_obj_3_sa_Ali } /*finally:*/ { if (__pyx_t_3) { - __pyx_t_7 = PyObject_Call(__pyx_t_3, __pyx_k_tuple_34, NULL); + __pyx_t_7 = PyObject_Call(__pyx_t_3, __pyx_k_tuple_37, NULL); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 71; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); @@ -10591,7 +11192,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_14write_enhanced(struct __pyx_obj_3_sa */ __pyx_t_1 = PyObject_GetAttr(__pyx_v_f, __pyx_n_s__write); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 91; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_2 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_18), __pyx_v_link); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 91; __pyx_clineno = __LINE__; goto __pyx_L7_error;} + __pyx_t_2 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_21), __pyx_v_link); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 91; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_2)); __pyx_t_10 = PyTuple_New(1); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 91; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_10); @@ -10615,7 +11216,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_14write_enhanced(struct __pyx_obj_3_sa */ __pyx_t_4 = PyObject_GetAttr(__pyx_v_f, __pyx_n_s__write); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 92; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_2 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_k_tuple_35), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 92; __pyx_clineno = __LINE__; goto __pyx_L7_error;} + __pyx_t_2 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_k_tuple_38), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 92; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; @@ -10674,7 +11275,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_14write_enhanced(struct __pyx_obj_3_sa */ __pyx_t_4 = PyObject_GetAttr(__pyx_v_f, __pyx_n_s__write); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 94; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_10 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_18), __pyx_v_i); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 94; __pyx_clineno = __LINE__; goto __pyx_L7_error;} + __pyx_t_10 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_21), __pyx_v_i); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 94; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_10)); __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 94; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_1); @@ -10698,7 +11299,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_14write_enhanced(struct __pyx_obj_3_sa */ __pyx_t_2 = PyObject_GetAttr(__pyx_v_f, __pyx_n_s__write); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 95; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_10 = PyObject_Call(__pyx_t_2, ((PyObject *)__pyx_k_tuple_36), NULL); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 95; __pyx_clineno = __LINE__; goto __pyx_L7_error;} + __pyx_t_10 = PyObject_Call(__pyx_t_2, ((PyObject *)__pyx_k_tuple_39), NULL); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 95; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_10); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; @@ -10777,7 +11378,7 @@ static PyObject *__pyx_pf_3_sa_9Alignment_14write_enhanced(struct __pyx_obj_3_sa } /*finally:*/ { if (__pyx_t_3) { - __pyx_t_7 = PyObject_Call(__pyx_t_3, __pyx_k_tuple_37, NULL); + __pyx_t_7 = PyObject_Call(__pyx_t_3, __pyx_k_tuple_40, NULL); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 88; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); @@ -11269,7 +11870,7 @@ static int __pyx_pw_3_sa_5BiLex_1__cinit__(PyObject *__pyx_v_self, PyObject *__p * self.id2eword = [] */ values[0] = ((PyObject *)Py_None); - values[1] = __pyx_k_38; + values[1] = __pyx_k_41; values[2] = ((PyObject *)Py_None); /* "/Users/vchahun/Sandbox/cdec/python/src/sa/bilex.pxi":55 @@ -12220,7 +12821,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_compute_from_data(struct __pyx_obj_3_sa_BiL __pyx_t_5 = 0; __pyx_t_11 = 0; __pyx_t_12 = 0; - __pyx_t_12 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_39), ((PyObject *)__pyx_t_13)); if (unlikely(!__pyx_t_12)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 124; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_12 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_42), ((PyObject *)__pyx_t_13)); if (unlikely(!__pyx_t_12)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 124; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_12)); __Pyx_DECREF(((PyObject *)__pyx_t_13)); __pyx_t_13 = 0; __pyx_t_13 = PyTuple_New(1); if (unlikely(!__pyx_t_13)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 124; __pyx_clineno = __LINE__; goto __pyx_L1_error;} @@ -14311,7 +14912,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ */ __pyx_t_12 = PyObject_GetAttr(__pyx_v_f, __pyx_n_s__seek); if (unlikely(!__pyx_t_12)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 302; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_12); - __pyx_t_1 = PyObject_Call(__pyx_t_12, ((PyObject *)__pyx_k_tuple_40), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 302; __pyx_clineno = __LINE__; goto __pyx_L7_error;} + __pyx_t_1 = PyObject_Call(__pyx_t_12, ((PyObject *)__pyx_k_tuple_43), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 302; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_t_12); __pyx_t_12 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; @@ -14642,7 +15243,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ } /*finally:*/ { if (__pyx_t_4) { - __pyx_t_7 = PyObject_Call(__pyx_t_4, __pyx_k_tuple_41, NULL); + __pyx_t_7 = PyObject_Call(__pyx_t_4, __pyx_k_tuple_44, NULL); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 278; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); @@ -14714,7 +15315,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_10read_text(struct __pyx_obj_3_sa_BiLex *_ */ __pyx_t_20 = __Pyx_PyInt_AsInt(__pyx_v_i); if (unlikely((__pyx_t_20 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 317; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_t_24 = __Pyx_PyInt_AsInt(__pyx_v_j); if (unlikely((__pyx_t_24 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 317; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_t_3 = ((PyObject *)__pyx_kp_s_42); + __pyx_t_3 = ((PyObject *)__pyx_kp_s_45); __Pyx_INCREF(__pyx_t_3); __pyx_t_2 = ((struct __pyx_vtabstruct_3_sa_BiLex *)__pyx_v_self->__pyx_vtab)->qsort(__pyx_v_self, __pyx_t_20, __pyx_t_24, __pyx_t_3); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 317; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); @@ -14937,7 +15538,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ * if i == j: #empty interval * return */ - __pyx_t_2 = PyObject_Call(__pyx_builtin_Exception, ((PyObject *)__pyx_k_tuple_44), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 344; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Call(__pyx_builtin_Exception, ((PyObject *)__pyx_k_tuple_47), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 344; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_Raise(__pyx_t_2, 0, 0, 0); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; @@ -15094,7 +15695,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ * self.qsort(p+1,j, pad+" ") * */ - __pyx_t_2 = PyNumber_Add(__pyx_v_pad, ((PyObject *)__pyx_kp_s_45)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 359; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyNumber_Add(__pyx_v_pad, ((PyObject *)__pyx_kp_s_48)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 359; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __pyx_t_4 = ((struct __pyx_vtabstruct_3_sa_BiLex *)__pyx_v_self->__pyx_vtab)->qsort(__pyx_v_self, __pyx_v_i, __pyx_v_p, __pyx_t_2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 359; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); @@ -15108,7 +15709,7 @@ static PyObject *__pyx_f_3_sa_5BiLex_qsort(struct __pyx_obj_3_sa_BiLex *__pyx_v_ * * */ - __pyx_t_4 = PyNumber_Add(__pyx_v_pad, ((PyObject *)__pyx_kp_s_45)); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 360; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = PyNumber_Add(__pyx_v_pad, ((PyObject *)__pyx_kp_s_48)); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 360; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __pyx_t_2 = ((struct __pyx_vtabstruct_3_sa_BiLex *)__pyx_v_self->__pyx_vtab)->qsort(__pyx_v_self, (__pyx_v_p + 1), __pyx_v_j, __pyx_t_4); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 360; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); @@ -15280,7 +15881,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL */ __pyx_t_1 = PyObject_GetAttr(__pyx_v_f, __pyx_n_s__write); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 366; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_2 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_18), __pyx_v_i); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 366; __pyx_clineno = __LINE__; goto __pyx_L7_error;} + __pyx_t_2 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_21), __pyx_v_i); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 366; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_2)); __pyx_t_10 = PyTuple_New(1); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 366; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_10); @@ -15304,7 +15905,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL */ __pyx_t_4 = PyObject_GetAttr(__pyx_v_f, __pyx_n_s__write); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 367; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_2 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_k_tuple_46), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 367; __pyx_clineno = __LINE__; goto __pyx_L7_error;} + __pyx_t_2 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_k_tuple_49), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 367; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 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{__pyx_filename = __pyx_f[5]; __pyx_lineno = 376; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; @@ -15762,7 +16363,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_12write_enhanced(struct __pyx_obj_3_sa_BiL } /*finally:*/ { if (__pyx_t_3) { - __pyx_t_7 = PyObject_Call(__pyx_t_3, __pyx_k_tuple_52, NULL); + __pyx_t_7 = PyObject_Call(__pyx_t_3, __pyx_k_tuple_55, NULL); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 364; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); @@ -16448,7 +17049,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_16write_text(struct __pyx_obj_3_sa_BiLex * __Pyx_GIVEREF(__pyx_v_score2); __pyx_t_4 = 0; __pyx_t_2 = 0; - __pyx_t_2 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_53), ((PyObject *)__pyx_t_12)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 418; __pyx_clineno = __LINE__; goto __pyx_L7_error;} + __pyx_t_2 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_56), ((PyObject *)__pyx_t_12)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 418; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_2)); __Pyx_DECREF(((PyObject *)__pyx_t_12)); __pyx_t_12 = 0; __pyx_t_12 = PyTuple_New(1); if (unlikely(!__pyx_t_12)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 418; __pyx_clineno = __LINE__; goto __pyx_L7_error;} @@ -16551,7 +17152,7 @@ static PyObject *__pyx_pf_3_sa_5BiLex_16write_text(struct __pyx_obj_3_sa_BiLex * } /*finally:*/ { if (__pyx_t_3) { - __pyx_t_7 = PyObject_Call(__pyx_t_3, __pyx_k_tuple_54, NULL); + __pyx_t_7 = PyObject_Call(__pyx_t_3, __pyx_k_tuple_57, NULL); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[5]; __pyx_lineno = 409; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); @@ -17543,7 +18144,7 @@ static 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__pyx_obj_3_sa___pyx_scope_struct_1___iter__ *)__pyx_generator->closure); + struct __pyx_obj_3_sa___pyx_scope_struct_3___iter__ *__pyx_cur_scope = ((struct __pyx_obj_3_sa___pyx_scope_struct_3___iter__ *)__pyx_generator->closure); PyObject *__pyx_r = NULL; int __pyx_t_1; PyObject *__pyx_t_2 = NULL; @@ -24076,7 +24677,7 @@ static int __pyx_pf_3_sa_4Rule___cinit__(struct __pyx_obj_3_sa_Rule *__pyx_v_sel */ __pyx_t_2 = PyInt_FromLong(__pyx_v_lhs); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[7]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_3 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_65), __pyx_t_2); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[7]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_68), __pyx_t_2); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[7]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L1_error;} 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(unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[12]; __pyx_lineno = 383; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_8); - __Pyx_INCREF(((PyObject *)__pyx_kp_s_76)); - PyTuple_SET_ITEM(__pyx_t_8, 0, ((PyObject *)__pyx_kp_s_76)); - __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_76)); + __Pyx_INCREF(((PyObject *)__pyx_kp_s_78)); + PyTuple_SET_ITEM(__pyx_t_8, 0, ((PyObject *)__pyx_kp_s_78)); + __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_78)); PyTuple_SET_ITEM(__pyx_t_8, 1, __pyx_t_3); __Pyx_GIVEREF(__pyx_t_3); __pyx_t_3 = 0; @@ -29504,7 +30105,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s * J2_set.add(combined_pattern) * */ - __pyx_t_8 = PyNumber_Add(__pyx_v_pattern1, ((PyObject *)__pyx_k_tuple_77)); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[12]; __pyx_lineno = 393; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_8 = PyNumber_Add(__pyx_v_pattern1, ((PyObject *)__pyx_k_tuple_79)); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[12]; __pyx_lineno = 393; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_8); __pyx_t_7 = PyNumber_Add(__pyx_t_8, __pyx_v_pattern2); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[12]; __pyx_lineno = 393; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); @@ -29613,7 +30214,7 @@ static PyObject *__pyx_pf_3_sa_14Precomputation_6precompute(struct __pyx_obj_3_s * IJ_set.add(combined_pattern) * */ - __pyx_t_7 = PyNumber_Add(__pyx_v_pattern1, ((PyObject *)__pyx_k_tuple_78)); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[12]; __pyx_lineno = 400; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyNumber_Add(__pyx_v_pattern1, ((PyObject *)__pyx_k_tuple_80)); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[12]; __pyx_lineno = 400; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); __pyx_t_8 = PyNumber_Add(__pyx_t_7, __pyx_v_pattern2); if (unlikely(!__pyx_t_8)) {__pyx_filename = 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PyDict_GetItem(__pyx_kwds, __pyx_n_s__side); + if (value) { values[2] = value; kw_args--; } + } } if (unlikely(kw_args > 0)) { if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "__cinit__") < 0)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 11; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } } else { switch (PyTuple_GET_SIZE(__pyx_args)) { + case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2); case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0); case 0: break; @@ -30621,21 +31231,22 @@ static int __pyx_pw_3_sa_11SuffixArray_1__cinit__(PyObject *__pyx_v_self, PyObje } __pyx_v_from_binary = values[0]; __pyx_v_from_text = values[1]; + __pyx_v_side = values[2]; } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("__cinit__", 0, 0, 2, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[13]; __pyx_lineno = 11; __pyx_clineno = __LINE__; goto 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PyTuple_SET_ITEM(__pyx_t_3, 1, __pyx_v_side); + __Pyx_GIVEREF(__pyx_v_side); __pyx_t_1 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_t_3), NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 18; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_1); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; @@ -30782,7 +31396,7 @@ static PyObject *__pyx_pw_3_sa_11SuffixArray_3__getitem__(PyObject *__pyx_v_self } /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":20 - * self.read_text(from_text) + * self.read_text(from_text, side) * * def __getitem__(self, i): # <<<<<<<<<<<<<< * return self.sa.arr[i] @@ -30995,7 +31609,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_8getSentPos(struct __pyx_obj_3_sa_S * def getSentPos(self, loc): * return self.darray.getSentPos(loc) # <<<<<<<<<<<<<< * - * def read_text(self, char* filename): + * def read_text(self, filename, side): */ __Pyx_XDECREF(__pyx_r); __pyx_t_1 = PyObject_GetAttr(((PyObject *)__pyx_v_self->darray), __pyx_n_s__getSentPos); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 30; __pyx_clineno = __LINE__; goto __pyx_L1_error;} @@ -31028,23 +31642,58 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_8getSentPos(struct __pyx_obj_3_sa_S } /* Python wrapper */ -static PyObject *__pyx_pw_3_sa_11SuffixArray_11read_text(PyObject *__pyx_v_self, PyObject *__pyx_arg_filename); /*proto*/ +static PyObject *__pyx_pw_3_sa_11SuffixArray_11read_text(PyObject *__pyx_v_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/ static char __pyx_doc_3_sa_11SuffixArray_10read_text[] = "Constructs suffix array using the algorithm\n of Larsson & Sadahkane (1999)"; -static PyObject *__pyx_pw_3_sa_11SuffixArray_11read_text(PyObject *__pyx_v_self, PyObject *__pyx_arg_filename) { - char *__pyx_v_filename; +static PyObject *__pyx_pw_3_sa_11SuffixArray_11read_text(PyObject *__pyx_v_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { + PyObject *__pyx_v_filename = 0; + PyObject *__pyx_v_side = 0; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("read_text (wrapper)", 0); - assert(__pyx_arg_filename); { - __pyx_v_filename = PyBytes_AsString(__pyx_arg_filename); if (unlikely((!__pyx_v_filename) && PyErr_Occurred())) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + { + static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__filename,&__pyx_n_s__side,0}; + PyObject* values[2] = {0,0}; + if (unlikely(__pyx_kwds)) { + Py_ssize_t kw_args; + const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); + switch (pos_args) { + case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); + case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0); + case 0: break; + default: goto __pyx_L5_argtuple_error; + } + kw_args = PyDict_Size(__pyx_kwds); + switch (pos_args) { + case 0: + if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__filename)) != 0)) kw_args--; + else goto __pyx_L5_argtuple_error; + case 1: + if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s__side)) != 0)) kw_args--; + else { + __Pyx_RaiseArgtupleInvalid("read_text", 1, 2, 2, 1); {__pyx_filename = __pyx_f[13]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + } + } + if (unlikely(kw_args > 0)) { + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "read_text") < 0)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + } + } else if (PyTuple_GET_SIZE(__pyx_args) != 2) { + goto __pyx_L5_argtuple_error; + } else { + values[0] = PyTuple_GET_ITEM(__pyx_args, 0); + values[1] = PyTuple_GET_ITEM(__pyx_args, 1); + } + __pyx_v_filename = values[0]; + __pyx_v_side = values[1]; } goto __pyx_L4_argument_unpacking_done; + __pyx_L5_argtuple_error:; + __Pyx_RaiseArgtupleInvalid("read_text", 1, 2, 2, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[13]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L3_error;} __pyx_L3_error:; __Pyx_AddTraceback("_sa.SuffixArray.read_text", __pyx_clineno, __pyx_lineno, __pyx_filename); __Pyx_RefNannyFinishContext(); return NULL; __pyx_L4_argument_unpacking_done:; - __pyx_r = __pyx_pf_3_sa_11SuffixArray_10read_text(((struct __pyx_obj_3_sa_SuffixArray *)__pyx_v_self), ((char *)__pyx_v_filename)); + __pyx_r = __pyx_pf_3_sa_11SuffixArray_10read_text(((struct __pyx_obj_3_sa_SuffixArray *)__pyx_v_self), __pyx_v_filename, __pyx_v_side); __Pyx_RefNannyFinishContext(); return __pyx_r; } @@ -31052,12 +31701,12 @@ static PyObject *__pyx_pw_3_sa_11SuffixArray_11read_text(PyObject *__pyx_v_self, /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":32 * return self.darray.getSentPos(loc) * - * def read_text(self, char* filename): # <<<<<<<<<<<<<< + * def read_text(self, filename, side): # <<<<<<<<<<<<<< * '''Constructs suffix array using the algorithm * of Larsson & Sadahkane (1999)''' */ -static PyObject *__pyx_pf_3_sa_11SuffixArray_10read_text(struct __pyx_obj_3_sa_SuffixArray *__pyx_v_self, char *__pyx_v_filename) { +static PyObject *__pyx_pf_3_sa_11SuffixArray_10read_text(struct __pyx_obj_3_sa_SuffixArray *__pyx_v_self, PyObject *__pyx_v_filename, PyObject *__pyx_v_side) { int __pyx_v_V; int __pyx_v_N; int __pyx_v_i; @@ -31092,16 +31741,14 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_10read_text(struct __pyx_obj_3_sa_S /* "/Users/vchahun/Sandbox/cdec/python/src/sa/suffix_array.pxi":38 * cdef IntList isa, word_count * - * self.darray = DataArray(from_text=filename, use_sent_id=True) # <<<<<<<<<<<<<< + * self.darray = DataArray(from_text=filename, side=side, use_sent_id=True) # <<<<<<<<<<<<<< * N = len(self.darray) * V = len(self.darray.id2word) */ __pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 38; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_1)); - __pyx_t_2 = 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*)__pyx_kp_s_42); + values[4] = ((PyObject *)__pyx_kp_s_45); if (unlikely(__pyx_kwds)) { Py_ssize_t kw_args; const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); @@ -31980,7 +32627,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_12q3sort(struct __pyx_obj_3_sa_Suff __Pyx_GIVEREF(__pyx_t_3); __pyx_t_2 = 0; __pyx_t_3 = 0; - __pyx_t_3 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_93), ((PyObject *)__pyx_t_4)); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 117; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_95), ((PyObject *)__pyx_t_4)); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 117; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_3)); __Pyx_DECREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0; __pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 117; __pyx_clineno = __LINE__; goto __pyx_L1_error;} @@ -32339,7 +32986,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_12q3sort(struct __pyx_obj_3_sa_Suff __Pyx_GOTREF(__pyx_t_2); __pyx_t_6 = PyInt_FromLong(__pyx_v_h); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 165; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_6); - __pyx_t_7 = PyNumber_Add(__pyx_v_pad, ((PyObject *)__pyx_kp_s_45)); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 165; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_7 = PyNumber_Add(__pyx_v_pad, ((PyObject *)__pyx_kp_s_48)); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 165; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); __pyx_t_8 = PyTuple_New(5); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 165; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_8); @@ -32421,7 +33068,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_12q3sort(struct 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PyObject_GetAttr(((PyObject *)__pyx_v_self->darray), __pyx_n_s_24); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 199; __pyx_clineno = __LINE__; goto __pyx_L7_error;} + __pyx_t_4 = PyObject_GetAttr(((PyObject *)__pyx_v_self->darray), __pyx_n_s_27); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 199; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_4); __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 199; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_1); @@ -32878,7 +33525,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_20write_enhanced(struct __pyx_obj_3 */ __pyx_t_1 = PyObject_GetAttr(__pyx_v_f, __pyx_n_s__write); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 201; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_1); - __pyx_t_4 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_18), __pyx_v_a_i); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 201; __pyx_clineno = __LINE__; goto __pyx_L7_error;} + __pyx_t_4 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_21), __pyx_v_a_i); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 201; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_4)); __pyx_t_10 = PyTuple_New(1); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 201; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_10); @@ -32902,7 +33549,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_20write_enhanced(struct __pyx_obj_3 */ __pyx_t_2 = PyObject_GetAttr(__pyx_v_f, __pyx_n_s__write); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 202; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_4 = PyObject_Call(__pyx_t_2, ((PyObject *)__pyx_k_tuple_94), NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 202; __pyx_clineno = __LINE__; goto __pyx_L7_error;} + __pyx_t_4 = PyObject_Call(__pyx_t_2, ((PyObject *)__pyx_k_tuple_96), NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 202; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; @@ -32961,7 +33608,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_20write_enhanced(struct __pyx_obj_3 */ __pyx_t_2 = PyObject_GetAttr(__pyx_v_f, __pyx_n_s__write); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 204; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_t_10 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_18), __pyx_v_w_i); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 204; __pyx_clineno = __LINE__; goto __pyx_L7_error;} + __pyx_t_10 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_21), __pyx_v_w_i); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 204; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_10)); __pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 204; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_1); @@ -32985,7 +33632,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_20write_enhanced(struct __pyx_obj_3 */ __pyx_t_4 = PyObject_GetAttr(__pyx_v_f, __pyx_n_s__write); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_4); - __pyx_t_10 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_k_tuple_95), NULL); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L7_error;} + __pyx_t_10 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_k_tuple_97), NULL); if (unlikely(!__pyx_t_10)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L7_error;} __Pyx_GOTREF(__pyx_t_10); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; @@ -33064,7 +33711,7 @@ static PyObject *__pyx_pf_3_sa_11SuffixArray_20write_enhanced(struct __pyx_obj_3 } /*finally:*/ { if (__pyx_t_3) { - __pyx_t_7 = PyObject_Call(__pyx_t_3, __pyx_k_tuple_96, NULL); + __pyx_t_7 = PyObject_Call(__pyx_t_3, __pyx_k_tuple_98, NULL); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[13]; __pyx_lineno = 198; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_7); @@ -34267,7 +34914,7 @@ static int __pyx_pw_3_sa_9TrieTable_1__cinit__(PyObject *__pyx_v_self, PyObject { static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__extended,0}; PyObject* values[1] = {0}; - values[0] = __pyx_k_97; + values[0] = __pyx_k_99; if (unlikely(__pyx_kwds)) { Py_ssize_t kw_args; const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); @@ -35014,9 +35661,9 @@ static int __pyx_pf_3_sa_7Sampler___cinit__(struct __pyx_obj_3_sa_Sampler *__pyx __Pyx_GOTREF(__pyx_t_2); __pyx_t_4 = PyTuple_New(2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 90; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); - __Pyx_INCREF(((PyObject *)__pyx_kp_s_98)); - PyTuple_SET_ITEM(__pyx_t_4, 0, ((PyObject *)__pyx_kp_s_98)); - __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_98)); + __Pyx_INCREF(((PyObject *)__pyx_kp_s_100)); + PyTuple_SET_ITEM(__pyx_t_4, 0, ((PyObject *)__pyx_kp_s_100)); + __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_100)); PyTuple_SET_ITEM(__pyx_t_4, 1, __pyx_t_2); __Pyx_GIVEREF(__pyx_t_2); __pyx_t_2 = 0; @@ -35041,7 +35688,7 @@ static int __pyx_pf_3_sa_7Sampler___cinit__(struct __pyx_obj_3_sa_Sampler *__pyx __pyx_t_4 = PyObject_GetAttr(__pyx_t_2, __pyx_n_s__info); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 92; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_4); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; - __pyx_t_2 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_k_tuple_100), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 92; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Call(__pyx_t_4, ((PyObject *)__pyx_k_tuple_102), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 92; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0; __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; @@ -35829,7 +36476,7 @@ static int __pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(PyObject *__pyx_v_ __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("__cinit__ (wrapper)", 0); { - static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__alignment,&__pyx_n_s__by_slack_factor,&__pyx_n_s__category,&__pyx_n_s__max_chunks,&__pyx_n_s__max_initial_size,&__pyx_n_s__max_length,&__pyx_n_s__max_nonterminals,&__pyx_n_s__max_target_chunks,&__pyx_n_s__max_target_length,&__pyx_n_s__min_gap_size,&__pyx_n_s__precompute_file,&__pyx_n_s_68,&__pyx_n_s__precompute_rank,&__pyx_n_s_101,&__pyx_n_s_102,&__pyx_n_s_69,&__pyx_n_s__train_min_gap_size,&__pyx_n_s__tight_phrases,&__pyx_n_s__use_baeza_yates,&__pyx_n_s__use_collocations,&__pyx_n_s__use_index,0}; + static PyObject **__pyx_pyargnames[] = {&__pyx_n_s__alignment,&__pyx_n_s__by_slack_factor,&__pyx_n_s__category,&__pyx_n_s__max_chunks,&__pyx_n_s__max_initial_size,&__pyx_n_s__max_length,&__pyx_n_s__max_nonterminals,&__pyx_n_s__max_target_chunks,&__pyx_n_s__max_target_length,&__pyx_n_s__min_gap_size,&__pyx_n_s__precompute_file,&__pyx_n_s_70,&__pyx_n_s__precompute_rank,&__pyx_n_s_103,&__pyx_n_s_104,&__pyx_n_s_71,&__pyx_n_s__train_min_gap_size,&__pyx_n_s__tight_phrases,&__pyx_n_s__use_baeza_yates,&__pyx_n_s__use_collocations,&__pyx_n_s__use_index,0}; PyObject* values[21] = {0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0}; /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":257 @@ -35952,7 +36599,7 @@ static int __pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(PyObject *__pyx_v_ } case 11: if (kw_args > 0) { - PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_68); + PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_70); if (value) { values[11] = value; kw_args--; } } case 12: @@ -35962,17 +36609,17 @@ static int __pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(PyObject *__pyx_v_ } case 13: if (kw_args > 0) { - PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_101); + PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_103); if (value) { values[13] = value; kw_args--; } } case 14: if (kw_args > 0) { - PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_102); + PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_104); if (value) { values[14] = value; kw_args--; } } case 15: if (kw_args > 0) { - PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_69); + PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_71); if (value) { values[15] = value; kw_args--; } } case 16: @@ -36048,7 +36695,7 @@ static int __pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(PyObject *__pyx_v_ if (values[2]) { __pyx_v_category = PyBytes_AsString(values[2]); if (unlikely((!__pyx_v_category) && PyErr_Occurred())) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 255; __pyx_clineno = __LINE__; goto __pyx_L3_error;} } else { - __pyx_v_category = ((char *)__pyx_k_103); + __pyx_v_category = ((char *)__pyx_k_105); } __pyx_v_max_chunks = values[3]; if (values[4]) { @@ -36275,7 +36922,7 @@ static int __pyx_pf_3_sa_23HieroCachingRuleFactory___cinit__(struct __pyx_obj_3_ * self.alignment = alignment * */ - __pyx_t_2 = PyObject_Call(__pyx_builtin_Exception, ((PyObject *)__pyx_k_tuple_105), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 300; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyObject_Call(__pyx_builtin_Exception, ((PyObject *)__pyx_k_tuple_107), NULL); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 300; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); __Pyx_Raise(__pyx_t_2, 0, 0, 0); __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; @@ -37756,9 +38403,9 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; __pyx_t_2 = PyTuple_New(2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 422; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __Pyx_INCREF(((PyObject *)__pyx_kp_s_106)); - PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_kp_s_106)); - __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_106)); + __Pyx_INCREF(((PyObject *)__pyx_kp_s_108)); + PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_kp_s_108)); + __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_108)); __Pyx_INCREF(__pyx_v_self->precompute_file); PyTuple_SET_ITEM(__pyx_t_2, 1, __pyx_v_self->precompute_file); __Pyx_GIVEREF(__pyx_v_self->precompute_file); @@ -37812,9 +38459,9 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __Pyx_GOTREF(__pyx_t_3); __pyx_t_5 = PyTuple_New(3); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 426; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_5); - __Pyx_INCREF(((PyObject *)__pyx_kp_s_107)); - PyTuple_SET_ITEM(__pyx_t_5, 0, ((PyObject *)__pyx_kp_s_107)); - __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_107)); + __Pyx_INCREF(((PyObject *)__pyx_kp_s_109)); + PyTuple_SET_ITEM(__pyx_t_5, 0, ((PyObject *)__pyx_kp_s_109)); + __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_109)); PyTuple_SET_ITEM(__pyx_t_5, 1, __pyx_t_2); __Pyx_GIVEREF(__pyx_t_2); PyTuple_SET_ITEM(__pyx_t_5, 2, __pyx_t_3); @@ -37858,9 +38505,9 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __Pyx_GOTREF(__pyx_t_4); __pyx_t_2 = PyTuple_New(3); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 428; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __Pyx_INCREF(((PyObject *)__pyx_kp_s_108)); - PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_kp_s_108)); - __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_108)); + __Pyx_INCREF(((PyObject *)__pyx_kp_s_110)); + PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_kp_s_110)); + __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_110)); PyTuple_SET_ITEM(__pyx_t_2, 1, __pyx_t_3); __Pyx_GIVEREF(__pyx_t_3); PyTuple_SET_ITEM(__pyx_t_2, 2, __pyx_t_4); @@ -37905,7 +38552,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __Pyx_GIVEREF(__pyx_t_2); __pyx_t_4 = 0; __pyx_t_2 = 0; - __pyx_t_2 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_109), ((PyObject *)__pyx_t_5)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_111), ((PyObject *)__pyx_t_5)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_2)); __Pyx_DECREF(((PyObject *)__pyx_t_5)); __pyx_t_5 = 0; __pyx_t_5 = PyTuple_New(1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;} @@ -37952,7 +38599,7 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __Pyx_GIVEREF(__pyx_t_5); __pyx_t_2 = 0; __pyx_t_5 = 0; - __pyx_t_5 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_110), ((PyObject *)__pyx_t_4)); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 432; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PyNumber_Remainder(((PyObject *)__pyx_kp_s_112), ((PyObject *)__pyx_t_4)); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 432; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(((PyObject *)__pyx_t_5)); __Pyx_DECREF(((PyObject *)__pyx_t_4)); __pyx_t_4 = 0; __pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 432; __pyx_clineno = __LINE__; goto __pyx_L1_error;} @@ -37999,9 +38646,9 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __Pyx_GOTREF(__pyx_t_5); __pyx_t_2 = PyTuple_New(2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 434; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __Pyx_INCREF(((PyObject *)__pyx_kp_s_111)); - PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_kp_s_111)); - __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_111)); + __Pyx_INCREF(((PyObject *)__pyx_kp_s_113)); + PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_kp_s_113)); + __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_113)); PyTuple_SET_ITEM(__pyx_t_2, 1, __pyx_t_5); __Pyx_GIVEREF(__pyx_t_5); __pyx_t_5 = 0; @@ -38153,9 +38800,9 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __Pyx_GOTREF(__pyx_t_5); __pyx_t_2 = PyTuple_New(2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 440; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __Pyx_INCREF(((PyObject *)__pyx_kp_s_112)); - PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_kp_s_112)); - __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_112)); + __Pyx_INCREF(((PyObject *)__pyx_kp_s_114)); + PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_kp_s_114)); + __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_114)); PyTuple_SET_ITEM(__pyx_t_2, 1, __pyx_t_5); __Pyx_GIVEREF(__pyx_t_5); __pyx_t_5 = 0; @@ -38259,9 +38906,9 @@ static PyObject *__pyx_pf_3_sa_23HieroCachingRuleFactory_8precompute(struct __py __Pyx_GOTREF(__pyx_t_5); __pyx_t_2 = PyTuple_New(2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 445; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __Pyx_INCREF(((PyObject *)__pyx_kp_s_113)); - PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_kp_s_113)); - __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_113)); + __Pyx_INCREF(((PyObject *)__pyx_kp_s_115)); + PyTuple_SET_ITEM(__pyx_t_2, 0, ((PyObject *)__pyx_kp_s_115)); + __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_115)); PyTuple_SET_ITEM(__pyx_t_2, 1, __pyx_t_5); __Pyx_GIVEREF(__pyx_t_5); __pyx_t_5 = 0; @@ -40981,8 +41628,8 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_loc2str(CYTHON_UNUSED st * i = 0 * while i < loc.arr_high: */ - __Pyx_INCREF(((PyObject *)__pyx_kp_s_114)); - __pyx_v_result = ((PyObject *)__pyx_kp_s_114); + __Pyx_INCREF(((PyObject *)__pyx_kp_s_116)); + __pyx_v_result = ((PyObject *)__pyx_kp_s_116); /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":793 * cdef int i, j @@ -41011,7 +41658,7 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_loc2str(CYTHON_UNUSED st * for j from i <= j < i + loc.num_subpatterns: * result = result + ("%d " %loc.arr[j]) */ - __pyx_t_2 = PyNumber_Add(__pyx_v_result, ((PyObject *)__pyx_kp_s_115)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 795; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyNumber_Add(__pyx_v_result, ((PyObject *)__pyx_kp_s_117)); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 795; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); 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((struct __pyx_obj_3_sa___pyx_scope_struct_2_input *)__pyx_generator->closure); + struct __pyx_obj_3_sa___pyx_scope_struct_4_input *__pyx_cur_scope = ((struct __pyx_obj_3_sa___pyx_scope_struct_4_input *)__pyx_generator->closure); PyObject *__pyx_r = NULL; Py_ssize_t __pyx_t_1; PyObject *__pyx_t_2 = NULL; @@ -44879,7 +45526,7 @@ static PyObject *__pyx_gb_3_sa_23HieroCachingRuleFactory_24generator2(__pyx_Gene * # checking whether lookup_required * if lookup_required: */ - __pyx_t_3 = PyObject_Call(__pyx_builtin_Exception, ((PyObject *)__pyx_k_tuple_120), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1004; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = PyObject_Call(__pyx_builtin_Exception, ((PyObject *)__pyx_k_tuple_122), NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 1004; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); __Pyx_Raise(__pyx_t_3, 0, 0, 0); __Pyx_DECREF(__pyx_t_3); 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((PyObject *)__pyx_kp_s_123)); - __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_123)); + __Pyx_INCREF(((PyObject *)__pyx_kp_s_125)); + PyTuple_SET_ITEM(__pyx_t_15, 0, ((PyObject *)__pyx_kp_s_125)); + __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_125)); PyTuple_SET_ITEM(__pyx_t_15, 1, __pyx_t_14); __Pyx_GIVEREF(__pyx_t_14); __pyx_t_14 = 0; @@ -49754,8 +50401,8 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj * * for i from 0 <= i < e_sent_len: */ - __Pyx_INCREF(((PyObject *)__pyx_kp_s_42)); - __pyx_v_reason_for_failure = ((PyObject *)__pyx_kp_s_42); + __Pyx_INCREF(((PyObject *)__pyx_kp_s_45)); + __pyx_v_reason_for_failure = ((PyObject *)__pyx_kp_s_45); /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1446 * reason_for_failure = "" @@ -50129,9 +50776,9 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj * met_constraints = 0 * if self.require_aligned_chunks and num_aligned_chunks < num_chunks: */ - __Pyx_INCREF(((PyObject *)__pyx_kp_s_124)); + __Pyx_INCREF(((PyObject *)__pyx_kp_s_126)); __Pyx_DECREF(__pyx_v_reason_for_failure); - __pyx_v_reason_for_failure = ((PyObject *)__pyx_kp_s_124); + __pyx_v_reason_for_failure = ((PyObject *)__pyx_kp_s_126); /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1486 * if num_aligned_chunks == 0: @@ -50167,9 +50814,9 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj * met_constraints = 0 * */ - __Pyx_INCREF(((PyObject *)__pyx_kp_s_125)); + __Pyx_INCREF(((PyObject *)__pyx_kp_s_127)); __Pyx_DECREF(__pyx_v_reason_for_failure); - __pyx_v_reason_for_failure = ((PyObject *)__pyx_kp_s_125); + __pyx_v_reason_for_failure = ((PyObject *)__pyx_kp_s_127); /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1489 * if self.require_aligned_chunks and num_aligned_chunks < num_chunks: @@ -50227,9 +50874,9 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj * met_constraints = 0 * break */ - __Pyx_INCREF(((PyObject *)__pyx_kp_s_126)); + __Pyx_INCREF(((PyObject *)__pyx_kp_s_128)); __Pyx_DECREF(__pyx_v_reason_for_failure); - __pyx_v_reason_for_failure = ((PyObject *)__pyx_kp_s_126); + __pyx_v_reason_for_failure = ((PyObject *)__pyx_kp_s_128); /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1496 * if f_links_low[matching.arr[matching.start+i]+chunklen[i]-f_sent_start] == -1: @@ -50269,9 +50916,9 @@ static PyObject *__pyx_f_3_sa_23HieroCachingRuleFactory_extract(struct __pyx_obj * met_constraints = 0 * break */ - __Pyx_INCREF(((PyObject *)__pyx_kp_s_126)); + __Pyx_INCREF(((PyObject *)__pyx_kp_s_128)); __Pyx_DECREF(__pyx_v_reason_for_failure); - __pyx_v_reason_for_failure = ((PyObject *)__pyx_kp_s_126); + __pyx_v_reason_for_failure = ((PyObject *)__pyx_kp_s_128); /* "/Users/vchahun/Sandbox/cdec/python/src/sa/rulefactory.pxi":1500 * if f_links_low[matching.arr[matching.start+i+1]-1-f_sent_start] == -1: @@ -50483,9 +51130,9 @@ static PyObject 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{__Pyx_NAMESTR("read_text"), (PyCFunction)__pyx_pw_3_sa_9DataArray_17read_text, METH_O, __Pyx_DOCSTR(0)}, - {__Pyx_NAMESTR("read_binary"), (PyCFunction)__pyx_pw_3_sa_9DataArray_19read_binary, METH_O, __Pyx_DOCSTR(0)}, - {__Pyx_NAMESTR("write_binary"), (PyCFunction)__pyx_pw_3_sa_9DataArray_21write_binary, METH_O, __Pyx_DOCSTR(0)}, - {__Pyx_NAMESTR("write_enhanced_handle"), (PyCFunction)__pyx_pw_3_sa_9DataArray_23write_enhanced_handle, METH_O, __Pyx_DOCSTR(0)}, - {__Pyx_NAMESTR("write_enhanced"), (PyCFunction)__pyx_pw_3_sa_9DataArray_25write_enhanced, METH_O, __Pyx_DOCSTR(0)}, + {__Pyx_NAMESTR("read_bitext"), (PyCFunction)__pyx_pw_3_sa_9DataArray_19read_bitext, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(0)}, + {__Pyx_NAMESTR("read_text_data"), (PyCFunction)__pyx_pw_3_sa_9DataArray_21read_text_data, METH_O, __Pyx_DOCSTR(0)}, + {__Pyx_NAMESTR("read_binary"), (PyCFunction)__pyx_pw_3_sa_9DataArray_23read_binary, METH_O, __Pyx_DOCSTR(0)}, + {__Pyx_NAMESTR("write_binary"), (PyCFunction)__pyx_pw_3_sa_9DataArray_25write_binary, METH_O, __Pyx_DOCSTR(0)}, + {__Pyx_NAMESTR("write_enhanced_handle"), (PyCFunction)__pyx_pw_3_sa_9DataArray_27write_enhanced_handle, METH_O, __Pyx_DOCSTR(0)}, + {__Pyx_NAMESTR("write_enhanced"), (PyCFunction)__pyx_pw_3_sa_9DataArray_29write_enhanced, METH_O, __Pyx_DOCSTR(0)}, {0, 0, 0, 0} }; @@ -56869,7 +57518,7 @@ static PyMethodDef __pyx_methods_3_sa_SuffixArray[] = { {__Pyx_NAMESTR("getSentId"), (PyCFunction)__pyx_pw_3_sa_11SuffixArray_5getSentId, METH_O, __Pyx_DOCSTR(0)}, {__Pyx_NAMESTR("getSent"), (PyCFunction)__pyx_pw_3_sa_11SuffixArray_7getSent, METH_O, __Pyx_DOCSTR(0)}, {__Pyx_NAMESTR("getSentPos"), (PyCFunction)__pyx_pw_3_sa_11SuffixArray_9getSentPos, METH_O, __Pyx_DOCSTR(0)}, - {__Pyx_NAMESTR("read_text"), (PyCFunction)__pyx_pw_3_sa_11SuffixArray_11read_text, METH_O, __Pyx_DOCSTR(__pyx_doc_3_sa_11SuffixArray_10read_text)}, + {__Pyx_NAMESTR("read_text"), (PyCFunction)__pyx_pw_3_sa_11SuffixArray_11read_text, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(__pyx_doc_3_sa_11SuffixArray_10read_text)}, {__Pyx_NAMESTR("q3sort"), (PyCFunction)__pyx_pw_3_sa_11SuffixArray_13q3sort, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(__pyx_doc_3_sa_11SuffixArray_12q3sort)}, {__Pyx_NAMESTR("write_text"), (PyCFunction)__pyx_pw_3_sa_11SuffixArray_15write_text, METH_O, __Pyx_DOCSTR(0)}, {__Pyx_NAMESTR("read_binary"), (PyCFunction)__pyx_pw_3_sa_11SuffixArray_17read_binary, METH_O, __Pyx_DOCSTR(0)}, @@ -58040,7 +58689,517 @@ static PyNumberMethods __pyx_tp_as_number_Sampler = { #endif }; -static PySequenceMethods __pyx_tp_as_sequence_Sampler = { +static PySequenceMethods __pyx_tp_as_sequence_Sampler = { + 0, /*sq_length*/ + 0, /*sq_concat*/ + 0, /*sq_repeat*/ + 0, /*sq_item*/ + 0, /*sq_slice*/ + 0, /*sq_ass_item*/ + 0, /*sq_ass_slice*/ + 0, /*sq_contains*/ + 0, /*sq_inplace_concat*/ + 0, /*sq_inplace_repeat*/ +}; + +static PyMappingMethods __pyx_tp_as_mapping_Sampler = { + 0, /*mp_length*/ + 0, /*mp_subscript*/ + 0, /*mp_ass_subscript*/ +}; + +static PyBufferProcs __pyx_tp_as_buffer_Sampler = { + #if PY_MAJOR_VERSION < 3 + 0, /*bf_getreadbuffer*/ + #endif + #if PY_MAJOR_VERSION < 3 + 0, /*bf_getwritebuffer*/ + #endif + #if PY_MAJOR_VERSION < 3 + 0, /*bf_getsegcount*/ + #endif + #if PY_MAJOR_VERSION < 3 + 0, /*bf_getcharbuffer*/ + #endif + #if PY_VERSION_HEX >= 0x02060000 + 0, /*bf_getbuffer*/ + #endif + #if PY_VERSION_HEX >= 0x02060000 + 0, /*bf_releasebuffer*/ + #endif +}; + +static PyTypeObject __pyx_type_3_sa_Sampler = { + PyVarObject_HEAD_INIT(0, 0) + __Pyx_NAMESTR("_sa.Sampler"), /*tp_name*/ + sizeof(struct __pyx_obj_3_sa_Sampler), /*tp_basicsize*/ + 0, /*tp_itemsize*/ + __pyx_tp_dealloc_3_sa_Sampler, /*tp_dealloc*/ + 0, /*tp_print*/ + 0, /*tp_getattr*/ + 0, /*tp_setattr*/ + #if PY_MAJOR_VERSION < 3 + 0, /*tp_compare*/ + #else + 0, /*reserved*/ + #endif + 0, /*tp_repr*/ + &__pyx_tp_as_number_Sampler, /*tp_as_number*/ + &__pyx_tp_as_sequence_Sampler, /*tp_as_sequence*/ + &__pyx_tp_as_mapping_Sampler, /*tp_as_mapping*/ + 0, /*tp_hash*/ + 0, /*tp_call*/ + 0, /*tp_str*/ + 0, /*tp_getattro*/ + 0, /*tp_setattro*/ + &__pyx_tp_as_buffer_Sampler, /*tp_as_buffer*/ + Py_TPFLAGS_DEFAULT|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ + __Pyx_DOCSTR("A Sampler implements a logic for choosing\n samples from a population range"), /*tp_doc*/ + __pyx_tp_traverse_3_sa_Sampler, /*tp_traverse*/ + __pyx_tp_clear_3_sa_Sampler, /*tp_clear*/ + 0, /*tp_richcompare*/ + 0, /*tp_weaklistoffset*/ + 0, /*tp_iter*/ + 0, /*tp_iternext*/ + __pyx_methods_3_sa_Sampler, /*tp_methods*/ + 0, /*tp_members*/ + 0, /*tp_getset*/ + 0, /*tp_base*/ + 0, /*tp_dict*/ + 0, /*tp_descr_get*/ + 0, /*tp_descr_set*/ + 0, /*tp_dictoffset*/ + 0, /*tp_init*/ + 0, /*tp_alloc*/ + __pyx_tp_new_3_sa_Sampler, /*tp_new*/ + 0, /*tp_free*/ + 0, /*tp_is_gc*/ + 0, /*tp_bases*/ + 0, /*tp_mro*/ + 0, /*tp_cache*/ + 0, /*tp_subclasses*/ + 0, /*tp_weaklist*/ + 0, /*tp_del*/ + #if PY_VERSION_HEX >= 0x02060000 + 0, /*tp_version_tag*/ + #endif +}; +static struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory __pyx_vtable_3_sa_HieroCachingRuleFactory; + +static PyObject *__pyx_tp_new_3_sa_HieroCachingRuleFactory(PyTypeObject *t, PyObject *a, PyObject *k) { + struct __pyx_obj_3_sa_HieroCachingRuleFactory *p; + PyObject *o = (*t->tp_alloc)(t, 0); + if (!o) return 0; + p = ((struct __pyx_obj_3_sa_HieroCachingRuleFactory *)o); + p->__pyx_vtab = __pyx_vtabptr_3_sa_HieroCachingRuleFactory; + p->rules = ((struct __pyx_obj_3_sa_TrieTable *)Py_None); Py_INCREF(Py_None); + p->sampler = ((struct __pyx_obj_3_sa_Sampler *)Py_None); Py_INCREF(Py_None); + p->precomputed_index = Py_None; Py_INCREF(Py_None); + p->precomputed_collocations = Py_None; Py_INCREF(Py_None); + p->precompute_file = Py_None; Py_INCREF(Py_None); + p->max_rank = Py_None; Py_INCREF(Py_None); + p->prev_norm_prefix = Py_None; Py_INCREF(Py_None); + p->fsa = ((struct __pyx_obj_3_sa_SuffixArray *)Py_None); Py_INCREF(Py_None); + p->fda = ((struct __pyx_obj_3_sa_DataArray *)Py_None); Py_INCREF(Py_None); + p->eda = ((struct __pyx_obj_3_sa_DataArray *)Py_None); Py_INCREF(Py_None); + p->alignment = ((struct __pyx_obj_3_sa_Alignment *)Py_None); Py_INCREF(Py_None); + p->eid2symid = ((struct __pyx_obj_3_sa_IntList *)Py_None); Py_INCREF(Py_None); + p->fid2symid = ((struct __pyx_obj_3_sa_IntList *)Py_None); Py_INCREF(Py_None); + p->findexes = ((struct __pyx_obj_3_sa_IntList *)Py_None); Py_INCREF(Py_None); + p->findexes1 = ((struct __pyx_obj_3_sa_IntList *)Py_None); Py_INCREF(Py_None); + if (__pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(o, a, k) < 0) { + Py_DECREF(o); o = 0; + } + return o; +} + +static void __pyx_tp_dealloc_3_sa_HieroCachingRuleFactory(PyObject *o) { + struct __pyx_obj_3_sa_HieroCachingRuleFactory *p = (struct __pyx_obj_3_sa_HieroCachingRuleFactory *)o; + Py_XDECREF(((PyObject *)p->rules)); + Py_XDECREF(((PyObject *)p->sampler)); + Py_XDECREF(p->precomputed_index); + Py_XDECREF(p->precomputed_collocations); + Py_XDECREF(p->precompute_file); + Py_XDECREF(p->max_rank); + Py_XDECREF(p->prev_norm_prefix); + Py_XDECREF(((PyObject *)p->fsa)); + Py_XDECREF(((PyObject *)p->fda)); + Py_XDECREF(((PyObject *)p->eda)); + Py_XDECREF(((PyObject *)p->alignment)); + Py_XDECREF(((PyObject *)p->eid2symid)); + Py_XDECREF(((PyObject *)p->fid2symid)); + Py_XDECREF(((PyObject *)p->findexes)); + Py_XDECREF(((PyObject *)p->findexes1)); + (*Py_TYPE(o)->tp_free)(o); +} + +static int __pyx_tp_traverse_3_sa_HieroCachingRuleFactory(PyObject *o, visitproc v, void *a) { + int e; + struct __pyx_obj_3_sa_HieroCachingRuleFactory *p = (struct __pyx_obj_3_sa_HieroCachingRuleFactory *)o; + if (p->rules) { + e = (*v)(((PyObject*)p->rules), a); if (e) return e; + } + if (p->sampler) { + e = (*v)(((PyObject*)p->sampler), a); if (e) return e; + } + if (p->precomputed_index) { + e = (*v)(p->precomputed_index, a); if (e) return e; + } + if (p->precomputed_collocations) { + e = (*v)(p->precomputed_collocations, a); if (e) return e; + } + if (p->precompute_file) { + e = (*v)(p->precompute_file, a); if (e) return e; + } + if (p->max_rank) { + e = (*v)(p->max_rank, a); if (e) return e; + } + if (p->prev_norm_prefix) { + e = (*v)(p->prev_norm_prefix, a); if (e) return e; + } + if (p->fsa) { + e = (*v)(((PyObject*)p->fsa), a); if (e) return e; + } + if (p->fda) { + e = (*v)(((PyObject*)p->fda), a); if (e) return e; + } + if (p->eda) { + e = (*v)(((PyObject*)p->eda), a); if (e) return e; + } + if (p->alignment) { + e = (*v)(((PyObject*)p->alignment), a); if (e) return e; + } + if (p->eid2symid) { + e = (*v)(((PyObject*)p->eid2symid), a); if (e) return e; + } + if (p->fid2symid) { + e = (*v)(((PyObject*)p->fid2symid), a); if (e) return e; + } + if (p->findexes) { + e = (*v)(((PyObject*)p->findexes), a); if (e) return e; + } + if (p->findexes1) { + e = (*v)(((PyObject*)p->findexes1), a); if (e) return e; + } + return 0; +} + +static int __pyx_tp_clear_3_sa_HieroCachingRuleFactory(PyObject *o) { + struct __pyx_obj_3_sa_HieroCachingRuleFactory *p = (struct __pyx_obj_3_sa_HieroCachingRuleFactory *)o; + PyObject* tmp; + tmp = ((PyObject*)p->rules); + p->rules = ((struct __pyx_obj_3_sa_TrieTable *)Py_None); Py_INCREF(Py_None); + Py_XDECREF(tmp); + tmp = ((PyObject*)p->sampler); + p->sampler = ((struct __pyx_obj_3_sa_Sampler *)Py_None); Py_INCREF(Py_None); + Py_XDECREF(tmp); + tmp = ((PyObject*)p->precomputed_index); + p->precomputed_index = Py_None; Py_INCREF(Py_None); + Py_XDECREF(tmp); + tmp = ((PyObject*)p->precomputed_collocations); + p->precomputed_collocations = Py_None; Py_INCREF(Py_None); + Py_XDECREF(tmp); + tmp = ((PyObject*)p->precompute_file); + p->precompute_file = Py_None; Py_INCREF(Py_None); + Py_XDECREF(tmp); + tmp = ((PyObject*)p->max_rank); + p->max_rank = Py_None; Py_INCREF(Py_None); + Py_XDECREF(tmp); + tmp = ((PyObject*)p->prev_norm_prefix); + p->prev_norm_prefix = Py_None; Py_INCREF(Py_None); + Py_XDECREF(tmp); + tmp = ((PyObject*)p->fsa); + p->fsa = ((struct __pyx_obj_3_sa_SuffixArray *)Py_None); Py_INCREF(Py_None); + Py_XDECREF(tmp); + tmp = ((PyObject*)p->fda); + p->fda = ((struct __pyx_obj_3_sa_DataArray *)Py_None); Py_INCREF(Py_None); + Py_XDECREF(tmp); + tmp = ((PyObject*)p->eda); + p->eda = ((struct __pyx_obj_3_sa_DataArray *)Py_None); Py_INCREF(Py_None); + Py_XDECREF(tmp); + tmp = ((PyObject*)p->alignment); + p->alignment = ((struct __pyx_obj_3_sa_Alignment *)Py_None); Py_INCREF(Py_None); + Py_XDECREF(tmp); + tmp = ((PyObject*)p->eid2symid); + p->eid2symid = ((struct __pyx_obj_3_sa_IntList *)Py_None); Py_INCREF(Py_None); + Py_XDECREF(tmp); + tmp = ((PyObject*)p->fid2symid); + p->fid2symid = ((struct __pyx_obj_3_sa_IntList *)Py_None); Py_INCREF(Py_None); + Py_XDECREF(tmp); + tmp = ((PyObject*)p->findexes); + p->findexes = ((struct __pyx_obj_3_sa_IntList *)Py_None); Py_INCREF(Py_None); + Py_XDECREF(tmp); + tmp = ((PyObject*)p->findexes1); + p->findexes1 = ((struct __pyx_obj_3_sa_IntList *)Py_None); Py_INCREF(Py_None); + Py_XDECREF(tmp); + return 0; +} + +static PyMethodDef __pyx_methods_3_sa_HieroCachingRuleFactory[] = { + {__Pyx_NAMESTR("configure"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_3configure, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(__pyx_doc_3_sa_23HieroCachingRuleFactory_2configure)}, + {__Pyx_NAMESTR("pattern2phrase"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_5pattern2phrase, METH_O, __Pyx_DOCSTR(0)}, + {__Pyx_NAMESTR("pattern2phrase_plus"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_7pattern2phrase_plus, METH_O, __Pyx_DOCSTR(0)}, + {__Pyx_NAMESTR("precompute"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_9precompute, METH_NOARGS, __Pyx_DOCSTR(0)}, + {__Pyx_NAMESTR("get_precomputed_collocation"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_11get_precomputed_collocation, METH_O, __Pyx_DOCSTR(0)}, + {__Pyx_NAMESTR("advance"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_13advance, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(0)}, + {__Pyx_NAMESTR("get_all_nodes_isteps_away"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_15get_all_nodes_isteps_away, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(0)}, + {__Pyx_NAMESTR("reachable"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_17reachable, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(0)}, + {__Pyx_NAMESTR("shortest"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_19shortest, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(0)}, + {__Pyx_NAMESTR("get_next_states"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_21get_next_states, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(0)}, + {__Pyx_NAMESTR("input"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_23input, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(__pyx_doc_3_sa_23HieroCachingRuleFactory_22input)}, + {0, 0, 0, 0} +}; + +static PyNumberMethods __pyx_tp_as_number_HieroCachingRuleFactory = { + 0, /*nb_add*/ + 0, /*nb_subtract*/ + 0, /*nb_multiply*/ + #if PY_MAJOR_VERSION < 3 + 0, /*nb_divide*/ + #endif + 0, /*nb_remainder*/ + 0, /*nb_divmod*/ + 0, /*nb_power*/ + 0, /*nb_negative*/ + 0, /*nb_positive*/ + 0, /*nb_absolute*/ + 0, /*nb_nonzero*/ + 0, /*nb_invert*/ + 0, /*nb_lshift*/ + 0, /*nb_rshift*/ + 0, /*nb_and*/ + 0, /*nb_xor*/ + 0, /*nb_or*/ + #if PY_MAJOR_VERSION < 3 + 0, /*nb_coerce*/ + #endif + 0, /*nb_int*/ + #if PY_MAJOR_VERSION < 3 + 0, /*nb_long*/ + #else + 0, /*reserved*/ + #endif + 0, /*nb_float*/ + #if PY_MAJOR_VERSION < 3 + 0, /*nb_oct*/ + #endif + #if PY_MAJOR_VERSION < 3 + 0, /*nb_hex*/ + #endif + 0, /*nb_inplace_add*/ + 0, /*nb_inplace_subtract*/ + 0, /*nb_inplace_multiply*/ + #if PY_MAJOR_VERSION < 3 + 0, /*nb_inplace_divide*/ + #endif + 0, /*nb_inplace_remainder*/ + 0, /*nb_inplace_power*/ + 0, /*nb_inplace_lshift*/ + 0, /*nb_inplace_rshift*/ + 0, /*nb_inplace_and*/ + 0, /*nb_inplace_xor*/ + 0, /*nb_inplace_or*/ + 0, /*nb_floor_divide*/ + 0, /*nb_true_divide*/ + 0, /*nb_inplace_floor_divide*/ + 0, /*nb_inplace_true_divide*/ + #if PY_VERSION_HEX >= 0x02050000 + 0, /*nb_index*/ + #endif +}; + +static PySequenceMethods __pyx_tp_as_sequence_HieroCachingRuleFactory = { + 0, /*sq_length*/ + 0, /*sq_concat*/ + 0, /*sq_repeat*/ + 0, /*sq_item*/ + 0, /*sq_slice*/ + 0, /*sq_ass_item*/ + 0, /*sq_ass_slice*/ + 0, /*sq_contains*/ + 0, /*sq_inplace_concat*/ + 0, /*sq_inplace_repeat*/ +}; + +static PyMappingMethods __pyx_tp_as_mapping_HieroCachingRuleFactory = { + 0, /*mp_length*/ + 0, /*mp_subscript*/ + 0, /*mp_ass_subscript*/ +}; + +static PyBufferProcs __pyx_tp_as_buffer_HieroCachingRuleFactory = { + #if PY_MAJOR_VERSION < 3 + 0, /*bf_getreadbuffer*/ + #endif + #if PY_MAJOR_VERSION < 3 + 0, /*bf_getwritebuffer*/ + #endif + #if PY_MAJOR_VERSION < 3 + 0, /*bf_getsegcount*/ + #endif + #if PY_MAJOR_VERSION < 3 + 0, /*bf_getcharbuffer*/ + #endif + #if PY_VERSION_HEX >= 0x02060000 + 0, /*bf_getbuffer*/ + #endif + #if PY_VERSION_HEX >= 0x02060000 + 0, /*bf_releasebuffer*/ + #endif +}; + +static PyTypeObject __pyx_type_3_sa_HieroCachingRuleFactory = { + PyVarObject_HEAD_INIT(0, 0) + __Pyx_NAMESTR("_sa.HieroCachingRuleFactory"), /*tp_name*/ + sizeof(struct __pyx_obj_3_sa_HieroCachingRuleFactory), /*tp_basicsize*/ + 0, /*tp_itemsize*/ + __pyx_tp_dealloc_3_sa_HieroCachingRuleFactory, /*tp_dealloc*/ + 0, /*tp_print*/ + 0, /*tp_getattr*/ + 0, /*tp_setattr*/ + #if PY_MAJOR_VERSION < 3 + 0, /*tp_compare*/ + #else + 0, /*reserved*/ + #endif + 0, /*tp_repr*/ + &__pyx_tp_as_number_HieroCachingRuleFactory, /*tp_as_number*/ + &__pyx_tp_as_sequence_HieroCachingRuleFactory, /*tp_as_sequence*/ + &__pyx_tp_as_mapping_HieroCachingRuleFactory, /*tp_as_mapping*/ + 0, /*tp_hash*/ + 0, /*tp_call*/ + 0, /*tp_str*/ + 0, /*tp_getattro*/ + 0, /*tp_setattro*/ + &__pyx_tp_as_buffer_HieroCachingRuleFactory, /*tp_as_buffer*/ + Py_TPFLAGS_DEFAULT|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ + __Pyx_DOCSTR("This RuleFactory implements a caching \n method using TrieTable, which makes phrase\n generation somewhat speedier -- phrases only\n need to be extracted once (however, it is\n quite possible they need to be scored \n for each input sentence, for contextual models)"), /*tp_doc*/ + __pyx_tp_traverse_3_sa_HieroCachingRuleFactory, /*tp_traverse*/ + __pyx_tp_clear_3_sa_HieroCachingRuleFactory, /*tp_clear*/ + 0, /*tp_richcompare*/ + 0, /*tp_weaklistoffset*/ + 0, /*tp_iter*/ + 0, /*tp_iternext*/ + __pyx_methods_3_sa_HieroCachingRuleFactory, /*tp_methods*/ + 0, /*tp_members*/ + 0, /*tp_getset*/ + 0, /*tp_base*/ + 0, /*tp_dict*/ + 0, /*tp_descr_get*/ + 0, /*tp_descr_set*/ + 0, /*tp_dictoffset*/ + 0, /*tp_init*/ + 0, /*tp_alloc*/ + __pyx_tp_new_3_sa_HieroCachingRuleFactory, /*tp_new*/ + 0, /*tp_free*/ + 0, /*tp_is_gc*/ + 0, /*tp_bases*/ + 0, /*tp_mro*/ + 0, /*tp_cache*/ + 0, /*tp_subclasses*/ + 0, /*tp_weaklist*/ + 0, /*tp_del*/ + #if PY_VERSION_HEX >= 0x02060000 + 0, /*tp_version_tag*/ + #endif +}; + +static PyObject *__pyx_tp_new_3_sa___pyx_scope_struct__read_bitext(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { + struct __pyx_obj_3_sa___pyx_scope_struct__read_bitext *p; + PyObject *o = (*t->tp_alloc)(t, 0); + if (!o) return 0; + p = ((struct __pyx_obj_3_sa___pyx_scope_struct__read_bitext *)o); + p->__pyx_v_fp = 0; + return o; +} + +static void __pyx_tp_dealloc_3_sa___pyx_scope_struct__read_bitext(PyObject *o) { + struct __pyx_obj_3_sa___pyx_scope_struct__read_bitext *p = (struct __pyx_obj_3_sa___pyx_scope_struct__read_bitext *)o; + Py_XDECREF(p->__pyx_v_fp); + (*Py_TYPE(o)->tp_free)(o); +} + +static int __pyx_tp_traverse_3_sa___pyx_scope_struct__read_bitext(PyObject *o, visitproc v, void *a) { + int e; + struct __pyx_obj_3_sa___pyx_scope_struct__read_bitext *p = (struct __pyx_obj_3_sa___pyx_scope_struct__read_bitext *)o; + if (p->__pyx_v_fp) { + e = (*v)(p->__pyx_v_fp, a); if (e) return e; + } + return 0; +} + +static int __pyx_tp_clear_3_sa___pyx_scope_struct__read_bitext(PyObject *o) { + struct __pyx_obj_3_sa___pyx_scope_struct__read_bitext *p = (struct __pyx_obj_3_sa___pyx_scope_struct__read_bitext *)o; + PyObject* tmp; + tmp = ((PyObject*)p->__pyx_v_fp); + p->__pyx_v_fp = Py_None; Py_INCREF(Py_None); + Py_XDECREF(tmp); + return 0; +} + +static PyMethodDef __pyx_methods_3_sa___pyx_scope_struct__read_bitext[] = { + {0, 0, 0, 0} +}; + +static PyNumberMethods __pyx_tp_as_number___pyx_scope_struct__read_bitext = { + 0, /*nb_add*/ + 0, /*nb_subtract*/ + 0, /*nb_multiply*/ + #if PY_MAJOR_VERSION < 3 + 0, /*nb_divide*/ + #endif + 0, /*nb_remainder*/ + 0, /*nb_divmod*/ + 0, /*nb_power*/ + 0, /*nb_negative*/ + 0, /*nb_positive*/ + 0, /*nb_absolute*/ + 0, /*nb_nonzero*/ + 0, /*nb_invert*/ + 0, /*nb_lshift*/ + 0, /*nb_rshift*/ + 0, /*nb_and*/ + 0, /*nb_xor*/ + 0, /*nb_or*/ + #if PY_MAJOR_VERSION < 3 + 0, /*nb_coerce*/ + #endif + 0, /*nb_int*/ + #if PY_MAJOR_VERSION < 3 + 0, /*nb_long*/ + #else + 0, /*reserved*/ + #endif + 0, /*nb_float*/ + #if PY_MAJOR_VERSION < 3 + 0, /*nb_oct*/ + #endif + #if PY_MAJOR_VERSION < 3 + 0, /*nb_hex*/ + #endif + 0, /*nb_inplace_add*/ + 0, /*nb_inplace_subtract*/ + 0, /*nb_inplace_multiply*/ + #if PY_MAJOR_VERSION < 3 + 0, /*nb_inplace_divide*/ + #endif + 0, /*nb_inplace_remainder*/ + 0, /*nb_inplace_power*/ + 0, /*nb_inplace_lshift*/ + 0, /*nb_inplace_rshift*/ + 0, /*nb_inplace_and*/ + 0, /*nb_inplace_xor*/ + 0, /*nb_inplace_or*/ + 0, /*nb_floor_divide*/ + 0, /*nb_true_divide*/ + 0, /*nb_inplace_floor_divide*/ + 0, /*nb_inplace_true_divide*/ + #if PY_VERSION_HEX >= 0x02050000 + 0, /*nb_index*/ + #endif +}; + +static PySequenceMethods __pyx_tp_as_sequence___pyx_scope_struct__read_bitext = { 0, /*sq_length*/ 0, /*sq_concat*/ 0, /*sq_repeat*/ @@ -58053,13 +59212,13 @@ static PySequenceMethods __pyx_tp_as_sequence_Sampler = { 0, /*sq_inplace_repeat*/ }; -static PyMappingMethods __pyx_tp_as_mapping_Sampler = { +static PyMappingMethods __pyx_tp_as_mapping___pyx_scope_struct__read_bitext = { 0, /*mp_length*/ 0, /*mp_subscript*/ 0, /*mp_ass_subscript*/ }; -static PyBufferProcs __pyx_tp_as_buffer_Sampler = { +static PyBufferProcs __pyx_tp_as_buffer___pyx_scope_struct__read_bitext = { #if PY_MAJOR_VERSION < 3 0, /*bf_getreadbuffer*/ #endif @@ -58080,12 +59239,12 @@ static PyBufferProcs __pyx_tp_as_buffer_Sampler = { #endif }; -static PyTypeObject __pyx_type_3_sa_Sampler = { +static PyTypeObject __pyx_type_3_sa___pyx_scope_struct__read_bitext = { PyVarObject_HEAD_INIT(0, 0) - __Pyx_NAMESTR("_sa.Sampler"), /*tp_name*/ - sizeof(struct __pyx_obj_3_sa_Sampler), /*tp_basicsize*/ + __Pyx_NAMESTR("_sa.__pyx_scope_struct__read_bitext"), /*tp_name*/ + sizeof(struct __pyx_obj_3_sa___pyx_scope_struct__read_bitext), /*tp_basicsize*/ 0, /*tp_itemsize*/ - __pyx_tp_dealloc_3_sa_Sampler, /*tp_dealloc*/ + __pyx_tp_dealloc_3_sa___pyx_scope_struct__read_bitext, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ @@ -58095,24 +59254,24 @@ static PyTypeObject __pyx_type_3_sa_Sampler = { 0, /*reserved*/ #endif 0, /*tp_repr*/ - &__pyx_tp_as_number_Sampler, /*tp_as_number*/ - &__pyx_tp_as_sequence_Sampler, /*tp_as_sequence*/ - &__pyx_tp_as_mapping_Sampler, /*tp_as_mapping*/ + &__pyx_tp_as_number___pyx_scope_struct__read_bitext, /*tp_as_number*/ + &__pyx_tp_as_sequence___pyx_scope_struct__read_bitext, /*tp_as_sequence*/ + &__pyx_tp_as_mapping___pyx_scope_struct__read_bitext, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ - &__pyx_tp_as_buffer_Sampler, /*tp_as_buffer*/ - Py_TPFLAGS_DEFAULT|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ - __Pyx_DOCSTR("A Sampler implements a logic for choosing\n samples from a population range"), /*tp_doc*/ - __pyx_tp_traverse_3_sa_Sampler, /*tp_traverse*/ - __pyx_tp_clear_3_sa_Sampler, /*tp_clear*/ + &__pyx_tp_as_buffer___pyx_scope_struct__read_bitext, /*tp_as_buffer*/ + Py_TPFLAGS_DEFAULT|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ + 0, /*tp_doc*/ + __pyx_tp_traverse_3_sa___pyx_scope_struct__read_bitext, /*tp_traverse*/ + __pyx_tp_clear_3_sa___pyx_scope_struct__read_bitext, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ - __pyx_methods_3_sa_Sampler, /*tp_methods*/ + __pyx_methods_3_sa___pyx_scope_struct__read_bitext, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ @@ -58122,7 +59281,7 @@ static PyTypeObject __pyx_type_3_sa_Sampler = { 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ - __pyx_tp_new_3_sa_Sampler, /*tp_new*/ + __pyx_tp_new_3_sa___pyx_scope_struct__read_bitext, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ @@ -58135,173 +59294,61 @@ static PyTypeObject __pyx_type_3_sa_Sampler = { 0, /*tp_version_tag*/ #endif }; -static struct __pyx_vtabstruct_3_sa_HieroCachingRuleFactory __pyx_vtable_3_sa_HieroCachingRuleFactory; -static PyObject *__pyx_tp_new_3_sa_HieroCachingRuleFactory(PyTypeObject *t, PyObject *a, PyObject *k) { - struct __pyx_obj_3_sa_HieroCachingRuleFactory *p; +static PyObject *__pyx_tp_new_3_sa___pyx_scope_struct_1_genexpr(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { + struct __pyx_obj_3_sa___pyx_scope_struct_1_genexpr *p; PyObject *o = (*t->tp_alloc)(t, 0); if (!o) return 0; - p = ((struct __pyx_obj_3_sa_HieroCachingRuleFactory *)o); - p->__pyx_vtab = __pyx_vtabptr_3_sa_HieroCachingRuleFactory; - p->rules = ((struct __pyx_obj_3_sa_TrieTable *)Py_None); Py_INCREF(Py_None); - p->sampler = ((struct __pyx_obj_3_sa_Sampler *)Py_None); Py_INCREF(Py_None); - p->precomputed_index = Py_None; Py_INCREF(Py_None); - p->precomputed_collocations = Py_None; Py_INCREF(Py_None); - p->precompute_file = Py_None; Py_INCREF(Py_None); - p->max_rank = Py_None; Py_INCREF(Py_None); - p->prev_norm_prefix = Py_None; Py_INCREF(Py_None); - p->fsa = ((struct __pyx_obj_3_sa_SuffixArray *)Py_None); Py_INCREF(Py_None); - p->fda = ((struct __pyx_obj_3_sa_DataArray *)Py_None); Py_INCREF(Py_None); - p->eda = ((struct __pyx_obj_3_sa_DataArray *)Py_None); Py_INCREF(Py_None); - p->alignment = ((struct __pyx_obj_3_sa_Alignment *)Py_None); Py_INCREF(Py_None); - p->eid2symid = ((struct __pyx_obj_3_sa_IntList *)Py_None); Py_INCREF(Py_None); - p->fid2symid = ((struct __pyx_obj_3_sa_IntList *)Py_None); Py_INCREF(Py_None); - p->findexes = ((struct __pyx_obj_3_sa_IntList *)Py_None); Py_INCREF(Py_None); - p->findexes1 = ((struct __pyx_obj_3_sa_IntList *)Py_None); Py_INCREF(Py_None); - if (__pyx_pw_3_sa_23HieroCachingRuleFactory_1__cinit__(o, a, k) < 0) { - Py_DECREF(o); o = 0; - } + p = ((struct __pyx_obj_3_sa___pyx_scope_struct_1_genexpr *)o); + p->__pyx_outer_scope = 0; + p->__pyx_v_line = 0; + p->__pyx_t_0 = 0; return o; } -static void __pyx_tp_dealloc_3_sa_HieroCachingRuleFactory(PyObject *o) { - struct __pyx_obj_3_sa_HieroCachingRuleFactory *p = (struct __pyx_obj_3_sa_HieroCachingRuleFactory *)o; - Py_XDECREF(((PyObject *)p->rules)); - Py_XDECREF(((PyObject *)p->sampler)); - Py_XDECREF(p->precomputed_index); - Py_XDECREF(p->precomputed_collocations); - Py_XDECREF(p->precompute_file); - Py_XDECREF(p->max_rank); - Py_XDECREF(p->prev_norm_prefix); - Py_XDECREF(((PyObject *)p->fsa)); - Py_XDECREF(((PyObject *)p->fda)); - Py_XDECREF(((PyObject *)p->eda)); - Py_XDECREF(((PyObject *)p->alignment)); - Py_XDECREF(((PyObject *)p->eid2symid)); - Py_XDECREF(((PyObject *)p->fid2symid)); - Py_XDECREF(((PyObject *)p->findexes)); - Py_XDECREF(((PyObject *)p->findexes1)); +static void __pyx_tp_dealloc_3_sa___pyx_scope_struct_1_genexpr(PyObject *o) { + struct __pyx_obj_3_sa___pyx_scope_struct_1_genexpr *p = (struct __pyx_obj_3_sa___pyx_scope_struct_1_genexpr *)o; + Py_XDECREF(((PyObject *)p->__pyx_outer_scope)); + Py_XDECREF(p->__pyx_v_line); + Py_XDECREF(p->__pyx_t_0); (*Py_TYPE(o)->tp_free)(o); } -static int __pyx_tp_traverse_3_sa_HieroCachingRuleFactory(PyObject *o, visitproc v, void *a) { +static int __pyx_tp_traverse_3_sa___pyx_scope_struct_1_genexpr(PyObject *o, visitproc v, void *a) { int e; - struct __pyx_obj_3_sa_HieroCachingRuleFactory *p = (struct __pyx_obj_3_sa_HieroCachingRuleFactory *)o; - if (p->rules) { - e = (*v)(((PyObject*)p->rules), a); if (e) return e; - } - if (p->sampler) { - e = (*v)(((PyObject*)p->sampler), a); if (e) return e; - } - if (p->precomputed_index) { - e = (*v)(p->precomputed_index, a); if (e) return e; - } - if (p->precomputed_collocations) { - e = (*v)(p->precomputed_collocations, a); if (e) return e; - } - if (p->precompute_file) { - e = (*v)(p->precompute_file, a); if (e) return e; - } - if (p->max_rank) { - e = (*v)(p->max_rank, a); if (e) return e; - } - if (p->prev_norm_prefix) { - e = (*v)(p->prev_norm_prefix, a); if (e) return e; - } - if (p->fsa) { - e = (*v)(((PyObject*)p->fsa), a); if (e) return e; - } - if (p->fda) { - e = (*v)(((PyObject*)p->fda), a); if (e) return e; - } - if (p->eda) { - e = (*v)(((PyObject*)p->eda), a); if (e) return e; - } - if (p->alignment) { - e = (*v)(((PyObject*)p->alignment), a); if (e) return e; - } - if (p->eid2symid) { - e = (*v)(((PyObject*)p->eid2symid), a); if (e) return e; + struct __pyx_obj_3_sa___pyx_scope_struct_1_genexpr *p = (struct __pyx_obj_3_sa___pyx_scope_struct_1_genexpr *)o; + if (p->__pyx_outer_scope) { + e = (*v)(((PyObject*)p->__pyx_outer_scope), a); if (e) return e; } - if (p->fid2symid) { - e = (*v)(((PyObject*)p->fid2symid), a); if (e) return e; + if (p->__pyx_v_line) { + e = (*v)(p->__pyx_v_line, a); if (e) return e; } - if (p->findexes) { - e = (*v)(((PyObject*)p->findexes), a); if (e) return e; - } - if (p->findexes1) { - e = (*v)(((PyObject*)p->findexes1), a); if (e) return e; + if (p->__pyx_t_0) { + e = (*v)(p->__pyx_t_0, a); if (e) return e; } return 0; } -static int __pyx_tp_clear_3_sa_HieroCachingRuleFactory(PyObject *o) { - struct __pyx_obj_3_sa_HieroCachingRuleFactory *p = (struct __pyx_obj_3_sa_HieroCachingRuleFactory *)o; +static int __pyx_tp_clear_3_sa___pyx_scope_struct_1_genexpr(PyObject *o) { + struct __pyx_obj_3_sa___pyx_scope_struct_1_genexpr *p = (struct __pyx_obj_3_sa___pyx_scope_struct_1_genexpr *)o; PyObject* tmp; - tmp = ((PyObject*)p->rules); - p->rules = ((struct __pyx_obj_3_sa_TrieTable *)Py_None); Py_INCREF(Py_None); + tmp = ((PyObject*)p->__pyx_outer_scope); + p->__pyx_outer_scope = ((struct __pyx_obj_3_sa___pyx_scope_struct__read_bitext *)Py_None); Py_INCREF(Py_None); Py_XDECREF(tmp); - tmp = ((PyObject*)p->sampler); - p->sampler = ((struct __pyx_obj_3_sa_Sampler *)Py_None); Py_INCREF(Py_None); + tmp = ((PyObject*)p->__pyx_v_line); + p->__pyx_v_line = Py_None; Py_INCREF(Py_None); Py_XDECREF(tmp); - tmp = ((PyObject*)p->precomputed_index); - p->precomputed_index = Py_None; Py_INCREF(Py_None); - Py_XDECREF(tmp); - tmp = ((PyObject*)p->precomputed_collocations); - p->precomputed_collocations = Py_None; Py_INCREF(Py_None); - Py_XDECREF(tmp); - tmp = ((PyObject*)p->precompute_file); - p->precompute_file = Py_None; Py_INCREF(Py_None); - Py_XDECREF(tmp); - tmp = ((PyObject*)p->max_rank); - p->max_rank = Py_None; Py_INCREF(Py_None); - Py_XDECREF(tmp); - tmp = ((PyObject*)p->prev_norm_prefix); - p->prev_norm_prefix = Py_None; Py_INCREF(Py_None); - Py_XDECREF(tmp); - tmp = ((PyObject*)p->fsa); - p->fsa = ((struct __pyx_obj_3_sa_SuffixArray *)Py_None); Py_INCREF(Py_None); - Py_XDECREF(tmp); - tmp = ((PyObject*)p->fda); - p->fda = ((struct __pyx_obj_3_sa_DataArray *)Py_None); Py_INCREF(Py_None); - Py_XDECREF(tmp); - tmp = ((PyObject*)p->eda); - p->eda = ((struct __pyx_obj_3_sa_DataArray *)Py_None); Py_INCREF(Py_None); - Py_XDECREF(tmp); - tmp = ((PyObject*)p->alignment); - p->alignment = ((struct __pyx_obj_3_sa_Alignment *)Py_None); Py_INCREF(Py_None); - Py_XDECREF(tmp); - tmp = ((PyObject*)p->eid2symid); - p->eid2symid = ((struct __pyx_obj_3_sa_IntList *)Py_None); Py_INCREF(Py_None); - Py_XDECREF(tmp); - tmp = ((PyObject*)p->fid2symid); - p->fid2symid = ((struct __pyx_obj_3_sa_IntList *)Py_None); Py_INCREF(Py_None); - Py_XDECREF(tmp); - tmp = ((PyObject*)p->findexes); - p->findexes = ((struct __pyx_obj_3_sa_IntList *)Py_None); Py_INCREF(Py_None); - Py_XDECREF(tmp); - tmp = ((PyObject*)p->findexes1); - p->findexes1 = ((struct __pyx_obj_3_sa_IntList *)Py_None); Py_INCREF(Py_None); + tmp = ((PyObject*)p->__pyx_t_0); + p->__pyx_t_0 = Py_None; Py_INCREF(Py_None); Py_XDECREF(tmp); return 0; } -static PyMethodDef __pyx_methods_3_sa_HieroCachingRuleFactory[] = { - {__Pyx_NAMESTR("configure"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_3configure, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(__pyx_doc_3_sa_23HieroCachingRuleFactory_2configure)}, - {__Pyx_NAMESTR("pattern2phrase"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_5pattern2phrase, METH_O, __Pyx_DOCSTR(0)}, - {__Pyx_NAMESTR("pattern2phrase_plus"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_7pattern2phrase_plus, METH_O, __Pyx_DOCSTR(0)}, - {__Pyx_NAMESTR("precompute"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_9precompute, METH_NOARGS, __Pyx_DOCSTR(0)}, - {__Pyx_NAMESTR("get_precomputed_collocation"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_11get_precomputed_collocation, METH_O, __Pyx_DOCSTR(0)}, - {__Pyx_NAMESTR("advance"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_13advance, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(0)}, - {__Pyx_NAMESTR("get_all_nodes_isteps_away"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_15get_all_nodes_isteps_away, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(0)}, - {__Pyx_NAMESTR("reachable"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_17reachable, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(0)}, - {__Pyx_NAMESTR("shortest"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_19shortest, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(0)}, - {__Pyx_NAMESTR("get_next_states"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_21get_next_states, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(0)}, - {__Pyx_NAMESTR("input"), (PyCFunction)__pyx_pw_3_sa_23HieroCachingRuleFactory_23input, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(__pyx_doc_3_sa_23HieroCachingRuleFactory_22input)}, +static PyMethodDef __pyx_methods_3_sa___pyx_scope_struct_1_genexpr[] = { {0, 0, 0, 0} }; -static PyNumberMethods __pyx_tp_as_number_HieroCachingRuleFactory = { +static PyNumberMethods __pyx_tp_as_number___pyx_scope_struct_1_genexpr = { 0, /*nb_add*/ 0, /*nb_subtract*/ 0, /*nb_multiply*/ @@ -58359,7 +59406,7 @@ static PyNumberMethods __pyx_tp_as_number_HieroCachingRuleFactory = { #endif }; -static PySequenceMethods __pyx_tp_as_sequence_HieroCachingRuleFactory = { +static PySequenceMethods __pyx_tp_as_sequence___pyx_scope_struct_1_genexpr = { 0, /*sq_length*/ 0, /*sq_concat*/ 0, /*sq_repeat*/ @@ -58372,13 +59419,13 @@ static PySequenceMethods __pyx_tp_as_sequence_HieroCachingRuleFactory = { 0, /*sq_inplace_repeat*/ }; -static PyMappingMethods __pyx_tp_as_mapping_HieroCachingRuleFactory = { +static PyMappingMethods __pyx_tp_as_mapping___pyx_scope_struct_1_genexpr = { 0, /*mp_length*/ 0, /*mp_subscript*/ 0, /*mp_ass_subscript*/ }; -static PyBufferProcs __pyx_tp_as_buffer_HieroCachingRuleFactory = { +static PyBufferProcs __pyx_tp_as_buffer___pyx_scope_struct_1_genexpr = { #if PY_MAJOR_VERSION < 3 0, /*bf_getreadbuffer*/ #endif @@ -58399,12 +59446,12 @@ static PyBufferProcs __pyx_tp_as_buffer_HieroCachingRuleFactory = { #endif }; -static PyTypeObject __pyx_type_3_sa_HieroCachingRuleFactory = { +static PyTypeObject __pyx_type_3_sa___pyx_scope_struct_1_genexpr = { PyVarObject_HEAD_INIT(0, 0) - __Pyx_NAMESTR("_sa.HieroCachingRuleFactory"), /*tp_name*/ - sizeof(struct __pyx_obj_3_sa_HieroCachingRuleFactory), /*tp_basicsize*/ + __Pyx_NAMESTR("_sa.__pyx_scope_struct_1_genexpr"), /*tp_name*/ + sizeof(struct __pyx_obj_3_sa___pyx_scope_struct_1_genexpr), /*tp_basicsize*/ 0, /*tp_itemsize*/ - __pyx_tp_dealloc_3_sa_HieroCachingRuleFactory, /*tp_dealloc*/ + __pyx_tp_dealloc_3_sa___pyx_scope_struct_1_genexpr, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ @@ -58414,24 +59461,24 @@ static PyTypeObject __pyx_type_3_sa_HieroCachingRuleFactory = { 0, /*reserved*/ #endif 0, /*tp_repr*/ - &__pyx_tp_as_number_HieroCachingRuleFactory, /*tp_as_number*/ - &__pyx_tp_as_sequence_HieroCachingRuleFactory, /*tp_as_sequence*/ - &__pyx_tp_as_mapping_HieroCachingRuleFactory, /*tp_as_mapping*/ + &__pyx_tp_as_number___pyx_scope_struct_1_genexpr, /*tp_as_number*/ + &__pyx_tp_as_sequence___pyx_scope_struct_1_genexpr, /*tp_as_sequence*/ + &__pyx_tp_as_mapping___pyx_scope_struct_1_genexpr, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ - &__pyx_tp_as_buffer_HieroCachingRuleFactory, /*tp_as_buffer*/ - Py_TPFLAGS_DEFAULT|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ - __Pyx_DOCSTR("This RuleFactory implements a caching \n method using TrieTable, which makes phrase\n generation somewhat speedier -- phrases only\n need to be extracted once (however, it is\n quite possible they need to be scored \n for each input sentence, for contextual models)"), /*tp_doc*/ - __pyx_tp_traverse_3_sa_HieroCachingRuleFactory, /*tp_traverse*/ - __pyx_tp_clear_3_sa_HieroCachingRuleFactory, /*tp_clear*/ + &__pyx_tp_as_buffer___pyx_scope_struct_1_genexpr, /*tp_as_buffer*/ + Py_TPFLAGS_DEFAULT|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ + 0, /*tp_doc*/ + __pyx_tp_traverse_3_sa___pyx_scope_struct_1_genexpr, /*tp_traverse*/ + __pyx_tp_clear_3_sa___pyx_scope_struct_1_genexpr, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ - __pyx_methods_3_sa_HieroCachingRuleFactory, /*tp_methods*/ + __pyx_methods_3_sa___pyx_scope_struct_1_genexpr, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ @@ -58441,7 +59488,7 @@ static PyTypeObject __pyx_type_3_sa_HieroCachingRuleFactory = { 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ - __pyx_tp_new_3_sa_HieroCachingRuleFactory, /*tp_new*/ + __pyx_tp_new_3_sa___pyx_scope_struct_1_genexpr, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ @@ -58455,11 +59502,11 @@ static PyTypeObject __pyx_type_3_sa_HieroCachingRuleFactory = { #endif }; -static PyObject *__pyx_tp_new_3_sa___pyx_scope_struct__compute_stats(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { - struct __pyx_obj_3_sa___pyx_scope_struct__compute_stats *p; +static PyObject *__pyx_tp_new_3_sa___pyx_scope_struct_2_compute_stats(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { + struct __pyx_obj_3_sa___pyx_scope_struct_2_compute_stats *p; PyObject *o = (*t->tp_alloc)(t, 0); if (!o) return 0; - p = ((struct __pyx_obj_3_sa___pyx_scope_struct__compute_stats *)o); + p = ((struct __pyx_obj_3_sa___pyx_scope_struct_2_compute_stats *)o); p->__pyx_v_ngram = 0; p->__pyx_v_ngram_start = 0; p->__pyx_v_ngram_starts = 0; @@ -58469,8 +59516,8 @@ static PyObject *__pyx_tp_new_3_sa___pyx_scope_struct__compute_stats(PyTypeObjec return o; } -static void __pyx_tp_dealloc_3_sa___pyx_scope_struct__compute_stats(PyObject *o) { - struct __pyx_obj_3_sa___pyx_scope_struct__compute_stats *p = (struct __pyx_obj_3_sa___pyx_scope_struct__compute_stats *)o; +static void __pyx_tp_dealloc_3_sa___pyx_scope_struct_2_compute_stats(PyObject *o) { + struct __pyx_obj_3_sa___pyx_scope_struct_2_compute_stats *p = (struct __pyx_obj_3_sa___pyx_scope_struct_2_compute_stats *)o; Py_XDECREF(((PyObject *)p->__pyx_v_ngram)); Py_XDECREF(((PyObject *)p->__pyx_v_ngram_start)); Py_XDECREF(((PyObject *)p->__pyx_v_ngram_starts)); @@ -58480,9 +59527,9 @@ static void __pyx_tp_dealloc_3_sa___pyx_scope_struct__compute_stats(PyObject *o) (*Py_TYPE(o)->tp_free)(o); } -static int __pyx_tp_traverse_3_sa___pyx_scope_struct__compute_stats(PyObject *o, visitproc v, void *a) { +static int __pyx_tp_traverse_3_sa___pyx_scope_struct_2_compute_stats(PyObject *o, visitproc v, void *a) { int e; - struct __pyx_obj_3_sa___pyx_scope_struct__compute_stats *p = (struct __pyx_obj_3_sa___pyx_scope_struct__compute_stats *)o; + struct __pyx_obj_3_sa___pyx_scope_struct_2_compute_stats *p = (struct __pyx_obj_3_sa___pyx_scope_struct_2_compute_stats *)o; if (p->__pyx_v_ngram) { e = (*v)(p->__pyx_v_ngram, a); if (e) return e; } @@ -58504,8 +59551,8 @@ static int __pyx_tp_traverse_3_sa___pyx_scope_struct__compute_stats(PyObject *o, return 0; } -static int __pyx_tp_clear_3_sa___pyx_scope_struct__compute_stats(PyObject *o) { - struct __pyx_obj_3_sa___pyx_scope_struct__compute_stats *p = (struct __pyx_obj_3_sa___pyx_scope_struct__compute_stats *)o; +static int __pyx_tp_clear_3_sa___pyx_scope_struct_2_compute_stats(PyObject *o) { + struct __pyx_obj_3_sa___pyx_scope_struct_2_compute_stats *p = (struct __pyx_obj_3_sa___pyx_scope_struct_2_compute_stats *)o; PyObject* tmp; tmp = ((PyObject*)p->__pyx_v_ngram); p->__pyx_v_ngram = ((PyObject*)Py_None); Py_INCREF(Py_None); @@ -58528,11 +59575,11 @@ static int __pyx_tp_clear_3_sa___pyx_scope_struct__compute_stats(PyObject *o) { return 0; } -static PyMethodDef __pyx_methods_3_sa___pyx_scope_struct__compute_stats[] = { +static PyMethodDef __pyx_methods_3_sa___pyx_scope_struct_2_compute_stats[] = { {0, 0, 0, 0} }; -static PyNumberMethods __pyx_tp_as_number___pyx_scope_struct__compute_stats = { +static PyNumberMethods __pyx_tp_as_number___pyx_scope_struct_2_compute_stats = { 0, /*nb_add*/ 0, /*nb_subtract*/ 0, /*nb_multiply*/ @@ -58590,7 +59637,7 @@ static PyNumberMethods __pyx_tp_as_number___pyx_scope_struct__compute_stats = { #endif }; -static PySequenceMethods __pyx_tp_as_sequence___pyx_scope_struct__compute_stats = { +static PySequenceMethods __pyx_tp_as_sequence___pyx_scope_struct_2_compute_stats = { 0, /*sq_length*/ 0, /*sq_concat*/ 0, /*sq_repeat*/ @@ -58603,13 +59650,13 @@ static PySequenceMethods __pyx_tp_as_sequence___pyx_scope_struct__compute_stats 0, /*sq_inplace_repeat*/ }; -static PyMappingMethods __pyx_tp_as_mapping___pyx_scope_struct__compute_stats = { +static PyMappingMethods __pyx_tp_as_mapping___pyx_scope_struct_2_compute_stats = { 0, /*mp_length*/ 0, /*mp_subscript*/ 0, /*mp_ass_subscript*/ }; -static PyBufferProcs __pyx_tp_as_buffer___pyx_scope_struct__compute_stats = { +static PyBufferProcs __pyx_tp_as_buffer___pyx_scope_struct_2_compute_stats = { #if PY_MAJOR_VERSION < 3 0, /*bf_getreadbuffer*/ #endif @@ -58630,12 +59677,12 @@ static PyBufferProcs __pyx_tp_as_buffer___pyx_scope_struct__compute_stats = { #endif }; -static PyTypeObject __pyx_type_3_sa___pyx_scope_struct__compute_stats = { +static PyTypeObject __pyx_type_3_sa___pyx_scope_struct_2_compute_stats = { PyVarObject_HEAD_INIT(0, 0) - __Pyx_NAMESTR("_sa.__pyx_scope_struct__compute_stats"), /*tp_name*/ - sizeof(struct __pyx_obj_3_sa___pyx_scope_struct__compute_stats), /*tp_basicsize*/ + __Pyx_NAMESTR("_sa.__pyx_scope_struct_2_compute_stats"), /*tp_name*/ + sizeof(struct __pyx_obj_3_sa___pyx_scope_struct_2_compute_stats), /*tp_basicsize*/ 0, /*tp_itemsize*/ - __pyx_tp_dealloc_3_sa___pyx_scope_struct__compute_stats, /*tp_dealloc*/ + __pyx_tp_dealloc_3_sa___pyx_scope_struct_2_compute_stats, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ @@ -58645,24 +59692,24 @@ static PyTypeObject __pyx_type_3_sa___pyx_scope_struct__compute_stats = { 0, /*reserved*/ #endif 0, /*tp_repr*/ - &__pyx_tp_as_number___pyx_scope_struct__compute_stats, /*tp_as_number*/ - &__pyx_tp_as_sequence___pyx_scope_struct__compute_stats, /*tp_as_sequence*/ - &__pyx_tp_as_mapping___pyx_scope_struct__compute_stats, /*tp_as_mapping*/ + &__pyx_tp_as_number___pyx_scope_struct_2_compute_stats, /*tp_as_number*/ + &__pyx_tp_as_sequence___pyx_scope_struct_2_compute_stats, /*tp_as_sequence*/ + &__pyx_tp_as_mapping___pyx_scope_struct_2_compute_stats, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ - &__pyx_tp_as_buffer___pyx_scope_struct__compute_stats, /*tp_as_buffer*/ + &__pyx_tp_as_buffer___pyx_scope_struct_2_compute_stats, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ - __pyx_tp_traverse_3_sa___pyx_scope_struct__compute_stats, /*tp_traverse*/ - __pyx_tp_clear_3_sa___pyx_scope_struct__compute_stats, /*tp_clear*/ + __pyx_tp_traverse_3_sa___pyx_scope_struct_2_compute_stats, /*tp_traverse*/ + __pyx_tp_clear_3_sa___pyx_scope_struct_2_compute_stats, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ - __pyx_methods_3_sa___pyx_scope_struct__compute_stats, /*tp_methods*/ + __pyx_methods_3_sa___pyx_scope_struct_2_compute_stats, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ @@ -58672,7 +59719,7 @@ static PyTypeObject __pyx_type_3_sa___pyx_scope_struct__compute_stats = { 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ - __pyx_tp_new_3_sa___pyx_scope_struct__compute_stats, /*tp_new*/ + __pyx_tp_new_3_sa___pyx_scope_struct_2_compute_stats, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ @@ -58686,32 +59733,32 @@ static PyTypeObject __pyx_type_3_sa___pyx_scope_struct__compute_stats = { #endif }; -static PyObject *__pyx_tp_new_3_sa___pyx_scope_struct_1___iter__(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { - struct __pyx_obj_3_sa___pyx_scope_struct_1___iter__ *p; +static PyObject *__pyx_tp_new_3_sa___pyx_scope_struct_3___iter__(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { + struct __pyx_obj_3_sa___pyx_scope_struct_3___iter__ *p; PyObject *o = (*t->tp_alloc)(t, 0); if (!o) return 0; - p = ((struct __pyx_obj_3_sa___pyx_scope_struct_1___iter__ *)o); + p = ((struct __pyx_obj_3_sa___pyx_scope_struct_3___iter__ *)o); p->__pyx_v_self = 0; return o; } -static void __pyx_tp_dealloc_3_sa___pyx_scope_struct_1___iter__(PyObject *o) { - struct __pyx_obj_3_sa___pyx_scope_struct_1___iter__ *p = (struct __pyx_obj_3_sa___pyx_scope_struct_1___iter__ *)o; +static void __pyx_tp_dealloc_3_sa___pyx_scope_struct_3___iter__(PyObject *o) { + struct __pyx_obj_3_sa___pyx_scope_struct_3___iter__ *p = (struct __pyx_obj_3_sa___pyx_scope_struct_3___iter__ *)o; Py_XDECREF(((PyObject *)p->__pyx_v_self)); (*Py_TYPE(o)->tp_free)(o); } -static int __pyx_tp_traverse_3_sa___pyx_scope_struct_1___iter__(PyObject *o, visitproc v, void *a) { +static int __pyx_tp_traverse_3_sa___pyx_scope_struct_3___iter__(PyObject *o, visitproc v, void *a) { int e; - struct __pyx_obj_3_sa___pyx_scope_struct_1___iter__ *p = (struct __pyx_obj_3_sa___pyx_scope_struct_1___iter__ *)o; + struct __pyx_obj_3_sa___pyx_scope_struct_3___iter__ *p = (struct __pyx_obj_3_sa___pyx_scope_struct_3___iter__ *)o; if (p->__pyx_v_self) { e = (*v)(((PyObject*)p->__pyx_v_self), a); if (e) return e; } return 0; } -static int __pyx_tp_clear_3_sa___pyx_scope_struct_1___iter__(PyObject *o) { - struct __pyx_obj_3_sa___pyx_scope_struct_1___iter__ *p = (struct __pyx_obj_3_sa___pyx_scope_struct_1___iter__ *)o; +static int __pyx_tp_clear_3_sa___pyx_scope_struct_3___iter__(PyObject *o) { + struct __pyx_obj_3_sa___pyx_scope_struct_3___iter__ *p = (struct __pyx_obj_3_sa___pyx_scope_struct_3___iter__ *)o; PyObject* tmp; tmp = ((PyObject*)p->__pyx_v_self); p->__pyx_v_self = ((struct __pyx_obj_3_sa_Phrase *)Py_None); Py_INCREF(Py_None); @@ -58719,11 +59766,11 @@ static int __pyx_tp_clear_3_sa___pyx_scope_struct_1___iter__(PyObject *o) { return 0; } -static PyMethodDef __pyx_methods_3_sa___pyx_scope_struct_1___iter__[] = { +static PyMethodDef __pyx_methods_3_sa___pyx_scope_struct_3___iter__[] = { {0, 0, 0, 0} }; -static PyNumberMethods __pyx_tp_as_number___pyx_scope_struct_1___iter__ = { +static PyNumberMethods __pyx_tp_as_number___pyx_scope_struct_3___iter__ = { 0, /*nb_add*/ 0, /*nb_subtract*/ 0, /*nb_multiply*/ @@ -58781,7 +59828,7 @@ static PyNumberMethods __pyx_tp_as_number___pyx_scope_struct_1___iter__ = { #endif }; -static PySequenceMethods __pyx_tp_as_sequence___pyx_scope_struct_1___iter__ = { +static PySequenceMethods __pyx_tp_as_sequence___pyx_scope_struct_3___iter__ = { 0, /*sq_length*/ 0, /*sq_concat*/ 0, /*sq_repeat*/ @@ -58794,13 +59841,13 @@ static PySequenceMethods __pyx_tp_as_sequence___pyx_scope_struct_1___iter__ = { 0, /*sq_inplace_repeat*/ }; -static PyMappingMethods __pyx_tp_as_mapping___pyx_scope_struct_1___iter__ = { +static PyMappingMethods __pyx_tp_as_mapping___pyx_scope_struct_3___iter__ = { 0, /*mp_length*/ 0, /*mp_subscript*/ 0, /*mp_ass_subscript*/ }; -static PyBufferProcs __pyx_tp_as_buffer___pyx_scope_struct_1___iter__ = { +static PyBufferProcs __pyx_tp_as_buffer___pyx_scope_struct_3___iter__ = { #if PY_MAJOR_VERSION < 3 0, /*bf_getreadbuffer*/ #endif @@ -58821,12 +59868,12 @@ static PyBufferProcs __pyx_tp_as_buffer___pyx_scope_struct_1___iter__ = { #endif }; -static PyTypeObject __pyx_type_3_sa___pyx_scope_struct_1___iter__ = { +static PyTypeObject __pyx_type_3_sa___pyx_scope_struct_3___iter__ = { PyVarObject_HEAD_INIT(0, 0) - __Pyx_NAMESTR("_sa.__pyx_scope_struct_1___iter__"), /*tp_name*/ - sizeof(struct __pyx_obj_3_sa___pyx_scope_struct_1___iter__), /*tp_basicsize*/ + __Pyx_NAMESTR("_sa.__pyx_scope_struct_3___iter__"), /*tp_name*/ + sizeof(struct __pyx_obj_3_sa___pyx_scope_struct_3___iter__), /*tp_basicsize*/ 0, /*tp_itemsize*/ - __pyx_tp_dealloc_3_sa___pyx_scope_struct_1___iter__, /*tp_dealloc*/ + __pyx_tp_dealloc_3_sa___pyx_scope_struct_3___iter__, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ @@ -58836,24 +59883,24 @@ static PyTypeObject __pyx_type_3_sa___pyx_scope_struct_1___iter__ = { 0, /*reserved*/ #endif 0, /*tp_repr*/ - &__pyx_tp_as_number___pyx_scope_struct_1___iter__, /*tp_as_number*/ - &__pyx_tp_as_sequence___pyx_scope_struct_1___iter__, /*tp_as_sequence*/ - &__pyx_tp_as_mapping___pyx_scope_struct_1___iter__, /*tp_as_mapping*/ + &__pyx_tp_as_number___pyx_scope_struct_3___iter__, /*tp_as_number*/ + &__pyx_tp_as_sequence___pyx_scope_struct_3___iter__, /*tp_as_sequence*/ + &__pyx_tp_as_mapping___pyx_scope_struct_3___iter__, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ - &__pyx_tp_as_buffer___pyx_scope_struct_1___iter__, /*tp_as_buffer*/ + &__pyx_tp_as_buffer___pyx_scope_struct_3___iter__, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ - __pyx_tp_traverse_3_sa___pyx_scope_struct_1___iter__, /*tp_traverse*/ - __pyx_tp_clear_3_sa___pyx_scope_struct_1___iter__, /*tp_clear*/ + __pyx_tp_traverse_3_sa___pyx_scope_struct_3___iter__, /*tp_traverse*/ + __pyx_tp_clear_3_sa___pyx_scope_struct_3___iter__, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ - __pyx_methods_3_sa___pyx_scope_struct_1___iter__, /*tp_methods*/ + __pyx_methods_3_sa___pyx_scope_struct_3___iter__, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ @@ -58863,7 +59910,7 @@ static PyTypeObject __pyx_type_3_sa___pyx_scope_struct_1___iter__ = { 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ - __pyx_tp_new_3_sa___pyx_scope_struct_1___iter__, /*tp_new*/ + __pyx_tp_new_3_sa___pyx_scope_struct_3___iter__, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ @@ -58877,11 +59924,11 @@ static PyTypeObject __pyx_type_3_sa___pyx_scope_struct_1___iter__ = { #endif }; -static PyObject *__pyx_tp_new_3_sa___pyx_scope_struct_2_input(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { - struct __pyx_obj_3_sa___pyx_scope_struct_2_input *p; +static PyObject *__pyx_tp_new_3_sa___pyx_scope_struct_4_input(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { + struct __pyx_obj_3_sa___pyx_scope_struct_4_input *p; PyObject *o = (*t->tp_alloc)(t, 0); if (!o) return 0; - p = ((struct __pyx_obj_3_sa___pyx_scope_struct_2_input *)o); + p = ((struct __pyx_obj_3_sa___pyx_scope_struct_4_input *)o); p->__pyx_v_alignment = 0; p->__pyx_v_als = 0; p->__pyx_v_alslist = 0; @@ -58935,8 +59982,8 @@ static PyObject *__pyx_tp_new_3_sa___pyx_scope_struct_2_input(PyTypeObject *t, C return o; } -static void __pyx_tp_dealloc_3_sa___pyx_scope_struct_2_input(PyObject *o) { - struct __pyx_obj_3_sa___pyx_scope_struct_2_input *p = (struct __pyx_obj_3_sa___pyx_scope_struct_2_input *)o; +static void __pyx_tp_dealloc_3_sa___pyx_scope_struct_4_input(PyObject *o) { + struct __pyx_obj_3_sa___pyx_scope_struct_4_input *p = (struct __pyx_obj_3_sa___pyx_scope_struct_4_input *)o; Py_XDECREF(p->__pyx_v_alignment); Py_XDECREF(p->__pyx_v_als); Py_XDECREF(p->__pyx_v_alslist); @@ -58990,9 +60037,9 @@ static void __pyx_tp_dealloc_3_sa___pyx_scope_struct_2_input(PyObject *o) { (*Py_TYPE(o)->tp_free)(o); } -static int __pyx_tp_traverse_3_sa___pyx_scope_struct_2_input(PyObject *o, visitproc v, void *a) { +static int __pyx_tp_traverse_3_sa___pyx_scope_struct_4_input(PyObject *o, visitproc v, void *a) { int e; - struct __pyx_obj_3_sa___pyx_scope_struct_2_input *p = (struct __pyx_obj_3_sa___pyx_scope_struct_2_input *)o; + struct __pyx_obj_3_sa___pyx_scope_struct_4_input *p = (struct __pyx_obj_3_sa___pyx_scope_struct_4_input *)o; if (p->__pyx_v_alignment) { e = (*v)(p->__pyx_v_alignment, a); if (e) return e; } @@ -59146,8 +60193,8 @@ static int __pyx_tp_traverse_3_sa___pyx_scope_struct_2_input(PyObject *o, visitp return 0; } -static int __pyx_tp_clear_3_sa___pyx_scope_struct_2_input(PyObject *o) { - struct __pyx_obj_3_sa___pyx_scope_struct_2_input *p = (struct __pyx_obj_3_sa___pyx_scope_struct_2_input *)o; +static int __pyx_tp_clear_3_sa___pyx_scope_struct_4_input(PyObject *o) { + struct __pyx_obj_3_sa___pyx_scope_struct_4_input *p = (struct __pyx_obj_3_sa___pyx_scope_struct_4_input *)o; PyObject* tmp; tmp = ((PyObject*)p->__pyx_v_alignment); p->__pyx_v_alignment = Py_None; Py_INCREF(Py_None); @@ -59302,11 +60349,11 @@ static int __pyx_tp_clear_3_sa___pyx_scope_struct_2_input(PyObject *o) { return 0; } -static PyMethodDef __pyx_methods_3_sa___pyx_scope_struct_2_input[] = { +static PyMethodDef __pyx_methods_3_sa___pyx_scope_struct_4_input[] = { {0, 0, 0, 0} }; -static PyNumberMethods __pyx_tp_as_number___pyx_scope_struct_2_input = { +static PyNumberMethods __pyx_tp_as_number___pyx_scope_struct_4_input = { 0, /*nb_add*/ 0, /*nb_subtract*/ 0, /*nb_multiply*/ @@ -59364,7 +60411,7 @@ static PyNumberMethods __pyx_tp_as_number___pyx_scope_struct_2_input = { #endif }; -static PySequenceMethods __pyx_tp_as_sequence___pyx_scope_struct_2_input = { +static PySequenceMethods __pyx_tp_as_sequence___pyx_scope_struct_4_input = { 0, /*sq_length*/ 0, /*sq_concat*/ 0, /*sq_repeat*/ @@ -59377,13 +60424,13 @@ static PySequenceMethods __pyx_tp_as_sequence___pyx_scope_struct_2_input = { 0, /*sq_inplace_repeat*/ }; -static PyMappingMethods __pyx_tp_as_mapping___pyx_scope_struct_2_input = { +static PyMappingMethods __pyx_tp_as_mapping___pyx_scope_struct_4_input = { 0, /*mp_length*/ 0, /*mp_subscript*/ 0, /*mp_ass_subscript*/ }; -static PyBufferProcs __pyx_tp_as_buffer___pyx_scope_struct_2_input = { +static PyBufferProcs __pyx_tp_as_buffer___pyx_scope_struct_4_input = { #if PY_MAJOR_VERSION < 3 0, /*bf_getreadbuffer*/ #endif @@ -59404,12 +60451,12 @@ static PyBufferProcs __pyx_tp_as_buffer___pyx_scope_struct_2_input = { #endif }; -static PyTypeObject __pyx_type_3_sa___pyx_scope_struct_2_input = { +static PyTypeObject __pyx_type_3_sa___pyx_scope_struct_4_input = { PyVarObject_HEAD_INIT(0, 0) - __Pyx_NAMESTR("_sa.__pyx_scope_struct_2_input"), /*tp_name*/ - sizeof(struct __pyx_obj_3_sa___pyx_scope_struct_2_input), /*tp_basicsize*/ + __Pyx_NAMESTR("_sa.__pyx_scope_struct_4_input"), /*tp_name*/ + sizeof(struct __pyx_obj_3_sa___pyx_scope_struct_4_input), /*tp_basicsize*/ 0, /*tp_itemsize*/ - __pyx_tp_dealloc_3_sa___pyx_scope_struct_2_input, /*tp_dealloc*/ + __pyx_tp_dealloc_3_sa___pyx_scope_struct_4_input, /*tp_dealloc*/ 0, /*tp_print*/ 0, /*tp_getattr*/ 0, /*tp_setattr*/ @@ -59419,24 +60466,24 @@ static PyTypeObject __pyx_type_3_sa___pyx_scope_struct_2_input = { 0, /*reserved*/ #endif 0, /*tp_repr*/ - &__pyx_tp_as_number___pyx_scope_struct_2_input, /*tp_as_number*/ - &__pyx_tp_as_sequence___pyx_scope_struct_2_input, /*tp_as_sequence*/ - &__pyx_tp_as_mapping___pyx_scope_struct_2_input, /*tp_as_mapping*/ + &__pyx_tp_as_number___pyx_scope_struct_4_input, /*tp_as_number*/ + &__pyx_tp_as_sequence___pyx_scope_struct_4_input, /*tp_as_sequence*/ + &__pyx_tp_as_mapping___pyx_scope_struct_4_input, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ - &__pyx_tp_as_buffer___pyx_scope_struct_2_input, /*tp_as_buffer*/ + &__pyx_tp_as_buffer___pyx_scope_struct_4_input, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ 0, /*tp_doc*/ - __pyx_tp_traverse_3_sa___pyx_scope_struct_2_input, /*tp_traverse*/ - __pyx_tp_clear_3_sa___pyx_scope_struct_2_input, /*tp_clear*/ + __pyx_tp_traverse_3_sa___pyx_scope_struct_4_input, /*tp_traverse*/ + __pyx_tp_clear_3_sa___pyx_scope_struct_4_input, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ - __pyx_methods_3_sa___pyx_scope_struct_2_input, /*tp_methods*/ + __pyx_methods_3_sa___pyx_scope_struct_4_input, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ @@ -59446,7 +60493,7 @@ static PyTypeObject __pyx_type_3_sa___pyx_scope_struct_2_input = { 0, /*tp_dictoffset*/ 0, /*tp_init*/ 0, /*tp_alloc*/ - __pyx_tp_new_3_sa___pyx_scope_struct_2_input, /*tp_new*/ + __pyx_tp_new_3_sa___pyx_scope_struct_4_input, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ @@ -59480,11 +60527,11 @@ static struct PyModuleDef __pyx_moduledef = { static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_s_1, __pyx_k_1, sizeof(__pyx_k_1), 0, 0, 1, 0}, - {&__pyx_n_s_101, __pyx_k_101, sizeof(__pyx_k_101), 0, 0, 1, 1}, - {&__pyx_n_s_102, __pyx_k_102, sizeof(__pyx_k_102), 0, 0, 1, 1}, - {&__pyx_kp_s_104, __pyx_k_104, sizeof(__pyx_k_104), 0, 0, 1, 0}, + {&__pyx_kp_s_100, __pyx_k_100, sizeof(__pyx_k_100), 0, 0, 1, 0}, + {&__pyx_kp_s_101, __pyx_k_101, sizeof(__pyx_k_101), 0, 0, 1, 0}, + {&__pyx_n_s_103, __pyx_k_103, sizeof(__pyx_k_103), 0, 0, 1, 1}, + {&__pyx_n_s_104, __pyx_k_104, sizeof(__pyx_k_104), 0, 0, 1, 1}, {&__pyx_kp_s_106, __pyx_k_106, sizeof(__pyx_k_106), 0, 0, 1, 0}, - {&__pyx_kp_s_107, __pyx_k_107, sizeof(__pyx_k_107), 0, 0, 1, 0}, {&__pyx_kp_s_108, __pyx_k_108, sizeof(__pyx_k_108), 0, 0, 1, 0}, {&__pyx_kp_s_109, __pyx_k_109, sizeof(__pyx_k_109), 0, 0, 1, 0}, {&__pyx_kp_s_110, __pyx_k_110, sizeof(__pyx_k_110), 0, 0, 1, 0}, @@ -59494,12 +60541,12 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_s_114, __pyx_k_114, sizeof(__pyx_k_114), 0, 0, 1, 0}, {&__pyx_kp_s_115, __pyx_k_115, sizeof(__pyx_k_115), 0, 0, 1, 0}, {&__pyx_kp_s_116, __pyx_k_116, sizeof(__pyx_k_116), 0, 0, 1, 0}, - {&__pyx_n_s_117, __pyx_k_117, sizeof(__pyx_k_117), 0, 0, 1, 1}, + {&__pyx_kp_s_117, __pyx_k_117, sizeof(__pyx_k_117), 0, 0, 1, 0}, {&__pyx_kp_s_118, __pyx_k_118, sizeof(__pyx_k_118), 0, 0, 1, 0}, - {&__pyx_kp_s_119, __pyx_k_119, sizeof(__pyx_k_119), 0, 0, 1, 0}, - {&__pyx_n_s_121, __pyx_k_121, sizeof(__pyx_k_121), 0, 0, 1, 1}, - {&__pyx_kp_s_122, __pyx_k_122, sizeof(__pyx_k_122), 0, 0, 1, 0}, - {&__pyx_kp_s_123, __pyx_k_123, sizeof(__pyx_k_123), 0, 0, 1, 0}, + {&__pyx_n_s_119, __pyx_k_119, sizeof(__pyx_k_119), 0, 0, 1, 1}, + {&__pyx_kp_s_120, __pyx_k_120, sizeof(__pyx_k_120), 0, 0, 1, 0}, + {&__pyx_kp_s_121, __pyx_k_121, sizeof(__pyx_k_121), 0, 0, 1, 0}, + {&__pyx_n_s_123, __pyx_k_123, sizeof(__pyx_k_123), 0, 0, 1, 1}, {&__pyx_kp_s_124, __pyx_k_124, sizeof(__pyx_k_124), 0, 0, 1, 0}, {&__pyx_kp_s_125, __pyx_k_125, sizeof(__pyx_k_125), 0, 0, 1, 0}, {&__pyx_kp_s_126, __pyx_k_126, sizeof(__pyx_k_126), 0, 0, 1, 0}, @@ -59509,49 +60556,49 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_s_13, __pyx_k_13, sizeof(__pyx_k_13), 0, 0, 1, 0}, {&__pyx_kp_s_130, __pyx_k_130, sizeof(__pyx_k_130), 0, 0, 1, 0}, {&__pyx_kp_s_131, __pyx_k_131, sizeof(__pyx_k_131), 0, 0, 1, 0}, - {&__pyx_kp_s_134, __pyx_k_134, sizeof(__pyx_k_134), 0, 0, 1, 0}, - {&__pyx_kp_s_135, __pyx_k_135, sizeof(__pyx_k_135), 0, 0, 1, 0}, - {&__pyx_kp_s_139, __pyx_k_139, sizeof(__pyx_k_139), 0, 0, 1, 0}, + {&__pyx_kp_s_132, __pyx_k_132, sizeof(__pyx_k_132), 0, 0, 1, 0}, + {&__pyx_kp_s_133, __pyx_k_133, sizeof(__pyx_k_133), 0, 0, 1, 0}, + {&__pyx_kp_s_136, __pyx_k_136, sizeof(__pyx_k_136), 0, 0, 1, 0}, + {&__pyx_kp_s_137, __pyx_k_137, sizeof(__pyx_k_137), 0, 0, 1, 0}, {&__pyx_kp_s_14, __pyx_k_14, sizeof(__pyx_k_14), 0, 0, 1, 0}, - {&__pyx_kp_s_140, __pyx_k_140, sizeof(__pyx_k_140), 0, 0, 1, 0}, + {&__pyx_kp_s_141, __pyx_k_141, sizeof(__pyx_k_141), 0, 0, 1, 0}, + {&__pyx_kp_s_142, __pyx_k_142, sizeof(__pyx_k_142), 0, 0, 1, 0}, {&__pyx_kp_s_18, __pyx_k_18, sizeof(__pyx_k_18), 0, 0, 1, 0}, {&__pyx_kp_s_2, __pyx_k_2, sizeof(__pyx_k_2), 0, 0, 1, 0}, - {&__pyx_kp_s_22, __pyx_k_22, sizeof(__pyx_k_22), 0, 0, 1, 0}, - {&__pyx_n_s_24, __pyx_k_24, sizeof(__pyx_k_24), 0, 0, 1, 1}, - {&__pyx_kp_s_28, __pyx_k_28, sizeof(__pyx_k_28), 0, 0, 1, 0}, + {&__pyx_kp_s_21, __pyx_k_21, sizeof(__pyx_k_21), 0, 0, 1, 0}, + {&__pyx_kp_s_25, __pyx_k_25, sizeof(__pyx_k_25), 0, 0, 1, 0}, + {&__pyx_n_s_27, __pyx_k_27, sizeof(__pyx_k_27), 0, 0, 1, 1}, {&__pyx_kp_s_3, __pyx_k_3, sizeof(__pyx_k_3), 0, 0, 1, 0}, - {&__pyx_kp_s_32, __pyx_k_32, sizeof(__pyx_k_32), 0, 0, 1, 0}, - {&__pyx_kp_s_39, __pyx_k_39, sizeof(__pyx_k_39), 0, 0, 1, 0}, + {&__pyx_kp_s_31, __pyx_k_31, sizeof(__pyx_k_31), 0, 0, 1, 0}, + {&__pyx_kp_s_35, __pyx_k_35, sizeof(__pyx_k_35), 0, 0, 1, 0}, {&__pyx_kp_s_4, __pyx_k_4, sizeof(__pyx_k_4), 0, 0, 1, 0}, {&__pyx_kp_s_42, __pyx_k_42, sizeof(__pyx_k_42), 0, 0, 1, 0}, - {&__pyx_kp_s_43, __pyx_k_43, sizeof(__pyx_k_43), 0, 0, 1, 0}, {&__pyx_kp_s_45, __pyx_k_45, sizeof(__pyx_k_45), 0, 0, 1, 0}, - {&__pyx_kp_s_47, __pyx_k_47, sizeof(__pyx_k_47), 0, 0, 1, 0}, - {&__pyx_kp_s_49, __pyx_k_49, sizeof(__pyx_k_49), 0, 0, 1, 0}, + {&__pyx_kp_s_46, __pyx_k_46, sizeof(__pyx_k_46), 0, 0, 1, 0}, + {&__pyx_kp_s_48, __pyx_k_48, sizeof(__pyx_k_48), 0, 0, 1, 0}, {&__pyx_kp_s_5, __pyx_k_5, sizeof(__pyx_k_5), 0, 0, 1, 0}, - {&__pyx_kp_s_53, __pyx_k_53, sizeof(__pyx_k_53), 0, 0, 1, 0}, - {&__pyx_kp_s_55, __pyx_k_55, sizeof(__pyx_k_55), 0, 0, 1, 0}, + {&__pyx_kp_s_50, __pyx_k_50, sizeof(__pyx_k_50), 0, 0, 1, 0}, + {&__pyx_kp_s_52, __pyx_k_52, sizeof(__pyx_k_52), 0, 0, 1, 0}, {&__pyx_kp_s_56, __pyx_k_56, sizeof(__pyx_k_56), 0, 0, 1, 0}, - {&__pyx_kp_s_57, __pyx_k_57, sizeof(__pyx_k_57), 0, 0, 1, 0}, + {&__pyx_kp_s_58, __pyx_k_58, sizeof(__pyx_k_58), 0, 0, 1, 0}, {&__pyx_kp_s_59, __pyx_k_59, sizeof(__pyx_k_59), 0, 0, 1, 0}, {&__pyx_kp_s_6, __pyx_k_6, sizeof(__pyx_k_6), 0, 0, 1, 0}, - {&__pyx_kp_s_61, __pyx_k_61, sizeof(__pyx_k_61), 0, 0, 1, 0}, + {&__pyx_kp_s_60, __pyx_k_60, sizeof(__pyx_k_60), 0, 0, 1, 0}, {&__pyx_kp_s_62, __pyx_k_62, sizeof(__pyx_k_62), 0, 0, 1, 0}, - {&__pyx_kp_s_63, __pyx_k_63, sizeof(__pyx_k_63), 0, 0, 1, 0}, {&__pyx_kp_s_64, __pyx_k_64, sizeof(__pyx_k_64), 0, 0, 1, 0}, {&__pyx_kp_s_65, __pyx_k_65, sizeof(__pyx_k_65), 0, 0, 1, 0}, {&__pyx_kp_s_66, __pyx_k_66, sizeof(__pyx_k_66), 0, 0, 1, 0}, {&__pyx_kp_s_67, __pyx_k_67, sizeof(__pyx_k_67), 0, 0, 1, 0}, - {&__pyx_n_s_68, __pyx_k_68, sizeof(__pyx_k_68), 0, 0, 1, 1}, - {&__pyx_n_s_69, __pyx_k_69, sizeof(__pyx_k_69), 0, 0, 1, 1}, + {&__pyx_kp_s_68, __pyx_k_68, sizeof(__pyx_k_68), 0, 0, 1, 0}, + {&__pyx_kp_s_69, __pyx_k_69, sizeof(__pyx_k_69), 0, 0, 1, 0}, {&__pyx_kp_s_7, __pyx_k_7, sizeof(__pyx_k_7), 0, 0, 1, 0}, - {&__pyx_kp_s_70, __pyx_k_70, sizeof(__pyx_k_70), 0, 0, 1, 0}, + {&__pyx_n_s_70, __pyx_k_70, sizeof(__pyx_k_70), 0, 0, 1, 1}, + {&__pyx_n_s_71, __pyx_k_71, sizeof(__pyx_k_71), 0, 0, 1, 1}, {&__pyx_kp_s_72, __pyx_k_72, sizeof(__pyx_k_72), 0, 0, 1, 0}, {&__pyx_kp_s_74, __pyx_k_74, sizeof(__pyx_k_74), 0, 0, 1, 0}, {&__pyx_kp_s_76, __pyx_k_76, sizeof(__pyx_k_76), 0, 0, 1, 0}, + {&__pyx_kp_s_78, __pyx_k_78, sizeof(__pyx_k_78), 0, 0, 1, 0}, {&__pyx_kp_s_8, __pyx_k_8, sizeof(__pyx_k_8), 0, 0, 1, 0}, - {&__pyx_kp_s_81, __pyx_k_81, sizeof(__pyx_k_81), 0, 0, 1, 0}, - {&__pyx_kp_s_82, __pyx_k_82, sizeof(__pyx_k_82), 0, 0, 1, 0}, {&__pyx_kp_s_83, __pyx_k_83, sizeof(__pyx_k_83), 0, 0, 1, 0}, {&__pyx_kp_s_84, __pyx_k_84, sizeof(__pyx_k_84), 0, 0, 1, 0}, {&__pyx_kp_s_85, __pyx_k_85, sizeof(__pyx_k_85), 0, 0, 1, 0}, @@ -59561,10 +60608,10 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_s_89, __pyx_k_89, sizeof(__pyx_k_89), 0, 0, 1, 0}, {&__pyx_kp_s_9, __pyx_k_9, sizeof(__pyx_k_9), 0, 0, 1, 0}, {&__pyx_kp_s_90, __pyx_k_90, sizeof(__pyx_k_90), 0, 0, 1, 0}, + {&__pyx_kp_s_91, __pyx_k_91, sizeof(__pyx_k_91), 0, 0, 1, 0}, {&__pyx_kp_s_92, __pyx_k_92, sizeof(__pyx_k_92), 0, 0, 1, 0}, - {&__pyx_kp_s_93, __pyx_k_93, sizeof(__pyx_k_93), 0, 0, 1, 0}, - {&__pyx_kp_s_98, __pyx_k_98, sizeof(__pyx_k_98), 0, 0, 1, 0}, - {&__pyx_kp_s_99, __pyx_k_99, sizeof(__pyx_k_99), 0, 0, 1, 0}, + {&__pyx_kp_s_94, __pyx_k_94, sizeof(__pyx_k_94), 0, 0, 1, 0}, + {&__pyx_kp_s_95, __pyx_k_95, sizeof(__pyx_k_95), 0, 0, 1, 0}, {&__pyx_kp_s__0, __pyx_k__0, sizeof(__pyx_k__0), 0, 0, 1, 0}, {&__pyx_kp_s__1, __pyx_k__1, sizeof(__pyx_k__1), 0, 0, 1, 0}, {&__pyx_n_s__END_OF_FILE, __pyx_k__END_OF_FILE, sizeof(__pyx_k__END_OF_FILE), 0, 0, 1, 1}, @@ -59682,7 +60729,9 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s__reachable, __pyx_k__reachable, sizeof(__pyx_k__reachable), 0, 0, 1, 1}, {&__pyx_n_s__reachable_buffer, __pyx_k__reachable_buffer, sizeof(__pyx_k__reachable_buffer), 0, 0, 1, 1}, {&__pyx_n_s__read_binary, __pyx_k__read_binary, sizeof(__pyx_k__read_binary), 0, 0, 1, 1}, + {&__pyx_n_s__read_bitext, __pyx_k__read_bitext, sizeof(__pyx_k__read_bitext), 0, 0, 1, 1}, {&__pyx_n_s__read_text, __pyx_k__read_text, sizeof(__pyx_k__read_text), 0, 0, 1, 1}, + {&__pyx_n_s__read_text_data, __pyx_k__read_text_data, sizeof(__pyx_k__read_text_data), 0, 0, 1, 1}, {&__pyx_n_s__res, __pyx_k__res, sizeof(__pyx_k__res), 0, 0, 1, 1}, {&__pyx_n_s__reset, __pyx_k__reset, sizeof(__pyx_k__reset), 0, 0, 1, 1}, {&__pyx_n_s__resource, __pyx_k__resource, sizeof(__pyx_k__resource), 0, 0, 1, 1}, @@ -59699,9 +60748,11 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s__seek, __pyx_k__seek, sizeof(__pyx_k__seek), 0, 0, 1, 1}, {&__pyx_n_s__setdefault, __pyx_k__setdefault, sizeof(__pyx_k__setdefault), 0, 0, 1, 1}, {&__pyx_n_s__shortest, __pyx_k__shortest, sizeof(__pyx_k__shortest), 0, 0, 1, 1}, + {&__pyx_n_s__side, __pyx_k__side, sizeof(__pyx_k__side), 0, 0, 1, 1}, {&__pyx_n_s__size, __pyx_k__size, sizeof(__pyx_k__size), 0, 0, 1, 1}, {&__pyx_n_s__skip, __pyx_k__skip, sizeof(__pyx_k__skip), 0, 0, 1, 1}, {&__pyx_n_s__sorted, __pyx_k__sorted, sizeof(__pyx_k__sorted), 0, 0, 1, 1}, + {&__pyx_n_s__source, __pyx_k__source, sizeof(__pyx_k__source), 0, 0, 1, 1}, {&__pyx_n_s__spanlen, __pyx_k__spanlen, sizeof(__pyx_k__spanlen), 0, 0, 1, 1}, {&__pyx_n_s__split, __pyx_k__split, sizeof(__pyx_k__split), 0, 0, 1, 1}, {&__pyx_n_s__start, __pyx_k__start, sizeof(__pyx_k__start), 0, 0, 1, 1}, @@ -59734,7 +60785,7 @@ static int __Pyx_InitCachedBuiltins(void) { __pyx_builtin_IndexError = __Pyx_GetName(__pyx_b, __pyx_n_s__IndexError); if (!__pyx_builtin_IndexError) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_builtin_range = __Pyx_GetName(__pyx_b, __pyx_n_s__range); if (!__pyx_builtin_range) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 27; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_builtin_TypeError = __Pyx_GetName(__pyx_b, __pyx_n_s__TypeError); if (!__pyx_builtin_TypeError) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 108; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_builtin_enumerate = __Pyx_GetName(__pyx_b, __pyx_n_s__enumerate); if (!__pyx_builtin_enumerate) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 67; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_builtin_enumerate = __Pyx_GetName(__pyx_b, __pyx_n_s__enumerate); if (!__pyx_builtin_enumerate) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 78; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_builtin_map = __Pyx_GetName(__pyx_b, __pyx_n_s__map); if (!__pyx_builtin_map) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 59; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __pyx_builtin_Exception = __Pyx_GetName(__pyx_b, __pyx_n_s__Exception); if 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__Pyx_GIVEREF(((PyObject *)__pyx_n_s__terminal)); - __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_137)); - __pyx_k_codeobj_138 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_k_tuple_137, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_139, __pyx_n_s__sym_fromstring, 104, __pyx_empty_bytes); if (unlikely(!__pyx_k_codeobj_138)) {__pyx_filename = __pyx_f[10]; __pyx_lineno = 104; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __Pyx_GIVEREF(((PyObject *)__pyx_k_tuple_139)); + __pyx_k_codeobj_140 = (PyObject*)__Pyx_PyCode_New(2, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_k_tuple_139, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_141, __pyx_n_s__sym_fromstring, 104, __pyx_empty_bytes); if (unlikely(!__pyx_k_codeobj_140)) {__pyx_filename = __pyx_f[10]; __pyx_lineno = 104; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_RefNannyFinishContext(); return 0; __pyx_L1_error:; @@ -60776,12 +61861,16 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{__pyx_filename = __pyx_f[9]; __pyx_lineno = 36; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_ptype_3_sa___pyx_scope_struct_2_compute_stats = &__pyx_type_3_sa___pyx_scope_struct_2_compute_stats; + if (PyType_Ready(&__pyx_type_3_sa___pyx_scope_struct_3___iter__) < 0) {__pyx_filename = __pyx_f[7]; __pyx_lineno = 141; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_ptype_3_sa___pyx_scope_struct_3___iter__ = &__pyx_type_3_sa___pyx_scope_struct_3___iter__; + if (PyType_Ready(&__pyx_type_3_sa___pyx_scope_struct_4_input) < 0) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 919; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_ptype_3_sa___pyx_scope_struct_4_input = &__pyx_type_3_sa___pyx_scope_struct_4_input; /*--- Type import code ---*/ /*--- Variable import code ---*/ /*--- Function import code ---*/ @@ -60844,7 +61933,7 @@ PyMODINIT_FUNC PyInit__sa(void) __pyx_t_2 = PyObject_GetAttr(__pyx_t_1, __pyx_n_s__getLogger); if (unlikely(!__pyx_t_2)) {__pyx_filename = 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__Pyx_GOTREF(__pyx_t_1); - __pyx_k_38 = __pyx_t_1; + __pyx_k_41 = __pyx_t_1; __Pyx_GIVEREF(__pyx_t_1); __pyx_t_1 = 0; @@ -60986,9 +62075,9 @@ PyMODINIT_FUNC PyInit__sa(void) __Pyx_GOTREF(__pyx_t_2); __pyx_t_3 = PyTuple_New(2); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 16; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_3); - __Pyx_INCREF(((PyObject *)__pyx_kp_s_140)); - PyTuple_SET_ITEM(__pyx_t_3, 0, ((PyObject *)__pyx_kp_s_140)); - __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_140)); + __Pyx_INCREF(((PyObject *)__pyx_kp_s_142)); + PyTuple_SET_ITEM(__pyx_t_3, 0, ((PyObject *)__pyx_kp_s_142)); + __Pyx_GIVEREF(((PyObject *)__pyx_kp_s_142)); PyTuple_SET_ITEM(__pyx_t_3, 1, __pyx_t_2); __Pyx_GIVEREF(__pyx_t_2); __pyx_t_2 = 0; @@ -61009,7 +62098,7 @@ PyMODINIT_FUNC PyInit__sa(void) */ __pyx_t_2 = __Pyx_PyBool_FromLong(0); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[8]; __pyx_lineno = 39; __pyx_clineno = __LINE__; goto __pyx_L1_error;} __Pyx_GOTREF(__pyx_t_2); - __pyx_k_97 = __pyx_t_2; + __pyx_k_99 = __pyx_t_2; __Pyx_GIVEREF(__pyx_t_2); __pyx_t_2 = 0; @@ -61451,6 +62540,10 @@ bad: return -1; } +static CYTHON_INLINE void __Pyx_RaiseClosureNameError(const char *varname) { + PyErr_Format(PyExc_NameError, "free variable '%s' referenced before assignment in enclosing scope", varname); +} + static CYTHON_INLINE long __Pyx_div_long(long a, long b) { long q = a / b; long r = a - q*b; @@ -61836,6 +62929,86 @@ bad: return module; } +static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int equals) { +#if CYTHON_COMPILING_IN_PYPY + return PyObject_RichCompareBool(s1, s2, equals); +#else + if (s1 == s2) { + return (equals == Py_EQ); + } else if (PyBytes_CheckExact(s1) & PyBytes_CheckExact(s2)) { + if (PyBytes_GET_SIZE(s1) != PyBytes_GET_SIZE(s2)) { + return (equals == Py_NE); + } else if (PyBytes_GET_SIZE(s1) == 1) { + if (equals == Py_EQ) + return (PyBytes_AS_STRING(s1)[0] == PyBytes_AS_STRING(s2)[0]); + else + return (PyBytes_AS_STRING(s1)[0] != PyBytes_AS_STRING(s2)[0]); + } else { + int result = memcmp(PyBytes_AS_STRING(s1), PyBytes_AS_STRING(s2), (size_t)PyBytes_GET_SIZE(s1)); + return (equals == Py_EQ) ? (result == 0) : (result != 0); + } + } else if ((s1 == Py_None) & PyBytes_CheckExact(s2)) { + return (equals == Py_NE); + } else if ((s2 == Py_None) & PyBytes_CheckExact(s1)) { + return (equals == Py_NE); + } else { + int result; + PyObject* py_result = PyObject_RichCompare(s1, s2, equals); + if (!py_result) + return -1; + result = __Pyx_PyObject_IsTrue(py_result); + Py_DECREF(py_result); + return result; + } +#endif +} + +static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals) { +#if CYTHON_COMPILING_IN_PYPY + return PyObject_RichCompareBool(s1, s2, equals); +#else + if (s1 == s2) { + return (equals == Py_EQ); + } else if (PyUnicode_CheckExact(s1) & PyUnicode_CheckExact(s2)) { + #if CYTHON_PEP393_ENABLED + if ((PyUnicode_READY(s1) < 0) || (PyUnicode_READY(s2) < 0)) + return -1; + if (PyUnicode_GET_LENGTH(s1) != PyUnicode_GET_LENGTH(s2)) { + return (equals == Py_NE); + } else if (PyUnicode_GET_LENGTH(s1) == 1) { + Py_UCS4 ch1 = PyUnicode_READ_CHAR(s1, 0); + Py_UCS4 ch2 = PyUnicode_READ_CHAR(s2, 0); + return (equals == Py_EQ) ? (ch1 == ch2) : (ch1 != ch2); + #else + if (PyUnicode_GET_SIZE(s1) != PyUnicode_GET_SIZE(s2)) { + return (equals == Py_NE); + } else if (PyUnicode_GET_SIZE(s1) == 1) { + Py_UNICODE ch1 = PyUnicode_AS_UNICODE(s1)[0]; + Py_UNICODE ch2 = PyUnicode_AS_UNICODE(s2)[0]; + return (equals == Py_EQ) ? (ch1 == ch2) : (ch1 != ch2); + #endif + } else { + int result = PyUnicode_Compare(s1, s2); + if ((result == -1) && unlikely(PyErr_Occurred())) + return -1; + return (equals == Py_EQ) ? (result == 0) : (result != 0); + } + } else if ((s1 == Py_None) & PyUnicode_CheckExact(s2)) { + return (equals == Py_NE); + } else if ((s2 == Py_None) & PyUnicode_CheckExact(s1)) { + return (equals == Py_NE); + } else { + int result; + PyObject* py_result = PyObject_RichCompare(s1, s2, equals); + if (!py_result) + return -1; + result = __Pyx_PyObject_IsTrue(py_result); + Py_DECREF(py_result); + return result; + } +#endif +} + static CYTHON_INLINE unsigned char __Pyx_PyInt_AsUnsignedChar(PyObject* x) { const unsigned char neg_one = (unsigned char)-1, const_zero = 0; const int is_unsigned = neg_one > const_zero; diff --git a/python/src/sa/data_array.pxi b/python/src/sa/data_array.pxi index 1c044694..7a102a7e 100644 --- a/python/src/sa/data_array.pxi +++ b/python/src/sa/data_array.pxi @@ -14,7 +14,7 @@ cdef class DataArray: cdef IntList sent_index cdef bint use_sent_id - def __cinit__(self, from_binary=None, from_text=None, bint use_sent_id=False): + def __cinit__(self, from_binary=None, from_text=None, side=None, bint use_sent_id=False): self.word2id = {"END_OF_FILE":0, "END_OF_LINE":1} self.id2word = ["END_OF_FILE", "END_OF_LINE"] self.data = IntList(1000,1000) @@ -24,7 +24,10 @@ cdef class DataArray: if from_binary: self.read_binary(from_binary) elif from_text: - self.read_text(from_text) + if side: + self.read_bitext(from_text, (0 if side == 'source' else 1)) + else: + self.read_text(from_text) def __len__(self): return len(self.data) @@ -62,21 +65,30 @@ cdef class DataArray: f.write("\n") def read_text(self, char* filename): - cdef int word_count = 0 with gzip_or_text(filename) as fp: - for line_num, line in enumerate(fp): - self.sent_index.append(word_count) - for word in line.split(): - self.data.append(self.get_id(word)) - if self.use_sent_id: - self.sent_id.append(line_num) - word_count = word_count + 1 - self.data.append(1) + self.read_text_data(fp) + + def read_bitext(self, char* filename, int side): + with gzip_or_text(filename) as fp: + data = (line.split(' ||| ')[side] for line in fp) + self.read_text_data(data) + + def read_text_data(self, data): + cdef int word_count = 0 + for line_num, line in enumerate(data): + self.sent_index.append(word_count) + for word in line.split(): + self.data.append(self.get_id(word)) if self.use_sent_id: self.sent_id.append(line_num) word_count = word_count + 1 - self.data.append(0) - self.sent_index.append(word_count) + self.data.append(1) + if self.use_sent_id: + self.sent_id.append(line_num) + word_count = word_count + 1 + self.data.append(0) + self.sent_index.append(word_count) + def read_binary(self, char* filename): cdef FILE* f diff --git a/python/src/sa/suffix_array.pxi b/python/src/sa/suffix_array.pxi index 20e6261d..d86e8ea6 100644 --- a/python/src/sa/suffix_array.pxi +++ b/python/src/sa/suffix_array.pxi @@ -8,14 +8,14 @@ cdef class SuffixArray: cdef IntList sa cdef IntList ha - def __cinit__(self, from_binary=None, from_text=None): + def __cinit__(self, from_binary=None, from_text=None, side=None): self.darray = DataArray() self.sa = IntList() self.ha = IntList() if from_binary: self.read_binary(from_binary) elif from_text: - self.read_text(from_text) + self.read_text(from_text, side) def __getitem__(self, i): return self.sa.arr[i] @@ -29,13 +29,13 @@ cdef class SuffixArray: def getSentPos(self, loc): return self.darray.getSentPos(loc) - def read_text(self, char* filename): + def read_text(self, filename, side): '''Constructs suffix array using the algorithm of Larsson & Sadahkane (1999)''' cdef int V, N, i, j, h, a_i, n, current_run, skip cdef IntList isa, word_count - self.darray = DataArray(from_text=filename, use_sent_id=True) + self.darray = DataArray(from_text=filename, side=side, use_sent_id=True) N = len(self.darray) V = len(self.darray.id2word) -- cgit v1.2.3